Rorug05G0466800

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Reverse (-)
64276059 .. 64278645
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0466800.1

Sequence Viewer

Length: 1350 bp
ATGAAGTGTTTCCATTTCACCAACGGCGAGAGGCGCGACGACGACGACGCCGAGCCCGGCGTCGTTTCTCGCGCGCCGTCCAAGGTCTCCTGGGCGCGGTCCCTCAGCGTGGCCTCCAGCAGCTACGACAACACCAACTACAATCGCCGCTCCGAGTTCGACTCCGACTCCCGCGACATGTCCGACTCGGCGGCCTTCTACGACTTGCTGAGTCAGCGCCGGGCCAATGATCTGAGGGTGTTCGCCTTCTCCGAGCTCAAATCGGCCAGCCGCGGGTTCAGTCGGGCCTTGCTGATCGGCGAGGGAGGGTTTGGGTGCGTTTTCCGAGGGATCGTCAATGACGACGGAGCTAAAATGGACGTCGCTATCAAACAGTTGAATCGTAATGGCTTCCAGGGGCATAAGGAGTGGATTAATGAGGTAAATTTTTTGGGGGTTGTCAAGCACCCGAATCTTGTGAAGCTAGTAGGATACTGTGCAGAAGATGATGAAAGGGGGATCCAACGTCTTTTGGTTTACGAACTTATGCATAATAGAAGCCTGGAGGACCATCTGTTGGTTCGGTGCCCATCACCGCTCCCATGGATGACGAGATTAAAAATTGCTCAGGATGCAGCGCGCGGGTTGGCGTACCTGCATGAAGAAATGGATTTCCAGCTTATATTCCGCGATTTTAAACCGTCAAATGTTCTGCTAGATGAGGACTACAATGCAAAGCTTTCAGACTTTGGACTCGCAAGGCAAGGACCTCTCCAGGGAATGACTCATGTATCAACCGCAGTTGTTGGGACGGTAGGGTATGCAGCTCCAGAATATGTACAGACAGGGAAACTTACCGCTAAAAGTGATGTCTGGAGCTTTGGAGTGGTTCTCTACGAGCTCATCACAGGAAGGAGGGCGATGGAGAGAAATCTGCCCCGGAGTGAGCAAAAACTTTTGGAATGGGTCAGACCTTACGCTTCAGACTCAAAGAAATTCCACCTTATTGTAGACCCTCGACTTGAAGGACAGTATTGCATCAAATCAGCTCAGAAGCTGGCATCGTTAGCTAACAGGTGTCTATCAAAACAACCAAAGTCTCGCCCGAAAATGAGTGACGTGGTTGGGATTTTGGGAACTATCATCGATGAGCAAACATCTCAAGATGAAGTTGCCCCTCAACCTGTTATCGAAACTGACGAGGCAAGGGAAGAAACTTTGGAGGTGGCTGAGATTGAATCTACTACCAAACAAGGAACCAAGAATCTGAAAAAGGTTTTCGATATAAGAGATATGGTAAACTTTAGAAACAAATCTATCGGGAAGTTAGATTGGAGAAACTGGACCCCTGGGTTGATACGAACTTGGTGA

Protein Analysis

449

Amino Acids

50.86

Weight (kDa)

7.09

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 368 4.7e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 99 - 369 5.5e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 363
Acc36I ACCTGC 1 cut(s) 642
AccB1I GGYRCC 1 cut(s) 564
AccB7I CCANNNNNTGG 1 cut(s) 556
AccBSI CCGCTC 2 cut(s) 150, 577
AccI GTMKAC 1 cut(s) 990
AccII CGCG 9 cut(s) 36, 72, 74, 97, 174, 273, 619, 621, 669
AclWI GGATC 3 cut(s) 338, 493, 506
AcoI YGGCCR 1 cut(s) 264
AcsI RAATTY 2 cut(s) 424, 974
AcuI CTGAAG 1 cut(s) 945
AcyI GRCGYC 3 cut(s) 48, 60, 360
AfaI GTAC 2 cut(s) 632, 819
AfiI CCNNNNNNNGG 5 cut(s) 96, 109, 273, 556, 755
AflIII ACRYGT 1 cut(s) 177
AgsI TTSAA 3 cut(s) 379, 1004, 1217
AjiI CACGTC 1 cut(s) 1099
AjnI CCWGG 5 cut(s) 89, 393, 540, 753, 1327
Alw21I GWGCWC 2 cut(s) 258, 882
Alw26I GTCTC 2 cut(s) 91, 1083
AlwI GGATC 3 cut(s) 338, 493, 506
AlwNI CAGNNNCTG 1 cut(s) 1036
AoxI GGCC 5 cut(s) 111, 192, 222, 264, 285
ApeKI GCWGC 3 cut(s) 120, 614, 803
ApoI RAATTY 2 cut(s) 424, 974
AseI ATTAAT 1 cut(s) 414
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 7 cut(s) 36, 74, 76, 97, 219, 619, 621
AspS9I GGNCC 6 cut(s) 99, 222, 285, 547, 746, 1323
AsuC2I CCSGG 3 cut(s) 57, 221, 919
AsuHPI GGTGA 2 cut(s) 10, 564
AvaII GGWCC 4 cut(s) 99, 547, 746, 1323
BaeGI GKGCMC 1 cut(s) 569
BaeI ACNNNNGTAYC 2 cut(s) 753, 786
BamHI GGATCC 1 cut(s) 498
BanI GGYRCC 1 cut(s) 564
BanII GRGCYC 3 cut(s) 57, 258, 882
Bbv12I GWGCWC 2 cut(s) 258, 882
BbvCI CCTCAGC 1 cut(s) 104
BbvI GCAGC 3 cut(s) 132, 626, 815
BccI CCATC 3 cut(s) 558, 577, 895
BceAI ACGGC 2 cut(s) 40, 61
BciT130I CCWGG 5 cut(s) 91, 395, 542, 755, 1329
BciVI GTATCC 1 cut(s) 464
BcnI CCSGG 3 cut(s) 57, 221, 919
BcoDI GTCTC 2 cut(s) 91, 1083
BfaI CTAG 2 cut(s) 464, 695
BfoI RGCGCY 1 cut(s) 220
BfuAI ACCTGC 1 cut(s) 642
BfuI GTATCC 1 cut(s) 464
BisI GCNGC 6 cut(s) 121, 148, 192, 271, 615, 804
BlsI GCNGC 6 cut(s) 122, 149, 193, 272, 616, 805
Bme1390I CCNGG 8 cut(s) 57, 91, 221, 395, 542, 755, 919, 1329
Bme18I GGWCC 4 cut(s) 99, 547, 746, 1323
BmgBI CACGTC 1 cut(s) 1099
BmgT120I GGNCC 6 cut(s) 99, 222, 285, 547, 746, 1323
BmiI GGNNCC 5 cut(s) 101, 500, 566, 1237, 1325
BmrFI CCNGG 8 cut(s) 57, 91, 221, 395, 542, 755, 919, 1329
BmsI GCATC 3 cut(s) 601, 1026, 1049
BplI GAGNNNNNCTC 4 cut(s) 146, 178, 855, 887
BpmI CTGGAG 5 cut(s) 100, 563, 737, 792, 874
Bpu10I CCTNAGC 2 cut(s) 104, 606
BpuEI CTTGAG 1 cut(s) 1125
BpuMI CCSGG 3 cut(s) 57, 221, 919
Bsa29I ATCGAT 1 cut(s) 1125
BsaHI GRCGYC 3 cut(s) 48, 60, 360
BsaI GGTCTC 1 cut(s) 91
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 5 cut(s) 96, 109, 273, 556, 755
Bse1I ACTGG 1 cut(s) 1325
BseBI CCWGG 5 cut(s) 91, 395, 542, 755, 1329
BseCI ATCGAT 1 cut(s) 1125
BseGI GGATG 2 cut(s) 591, 616
BseLI CCNNNNNNNGG 5 cut(s) 96, 109, 273, 556, 755
BseMII CTCAG 6 cut(s) 118, 200, 224, 620, 1043, 1200
BseNI ACTGG 1 cut(s) 1325
BsePI GCGCGC 2 cut(s) 72, 617
BseSI GKGCMC 1 cut(s) 569
BseXI GCAGC 3 cut(s) 132, 626, 815
BsgI GTGCAG 1 cut(s) 498
Bsh1236I CGCG 9 cut(s) 36, 72, 74, 97, 174, 273, 619, 621, 669
BshFI GGCC 5 cut(s) 113, 194, 224, 266, 287
BshNI GGYRCC 1 cut(s) 564
BshVI ATCGAT 1 cut(s) 1125
BsiHKAI GWGCWC 2 cut(s) 258, 882
BsiSI CCGG 3 cut(s) 57, 220, 919
BslFI GGGAC 2 cut(s) 85, 802
BslI CCNNNNNNNGG 5 cut(s) 96, 109, 273, 556, 755
BsmAI GTCTC 2 cut(s) 91, 1083
BsmFI GGGAC 2 cut(s) 85, 802
BsnI GGCC 5 cut(s) 113, 194, 224, 266, 287
Bso31I GGTCTC 1 cut(s) 91
Bsp1286I GDGCHC 4 cut(s) 57, 258, 569, 882
Bsp1407I TGTACA 1 cut(s) 817
Bsp143I GATC 4 cut(s) 229, 294, 330, 498
Bsp19I CCATGG 1 cut(s) 581
BspANI GGCC 5 cut(s) 113, 194, 224, 266, 287
BspCNI CTCAG 6 cut(s) 117, 201, 225, 619, 1042, 1201
BspDI ATCGAT 1 cut(s) 1125
BspFNI CGCG 9 cut(s) 36, 72, 74, 97, 174, 273, 619, 621, 669
BspLI GGNNCC 5 cut(s) 101, 500, 566, 1237, 1325
BspMI ACCTGC 1 cut(s) 642
BspPI GGATC 3 cut(s) 338, 493, 506
BspT107I GGYRCC 1 cut(s) 564
BspTNI GGTCTC 1 cut(s) 91
BsrBI CCGCTC 2 cut(s) 150, 577
BsrGI TGTACA 1 cut(s) 817
BsrI ACTGG 1 cut(s) 1325
BssHII GCGCGC 2 cut(s) 72, 617
BssMI GATC 4 cut(s) 229, 294, 330, 498
BssNI GRCGYC 3 cut(s) 48, 60, 360
BssT1I CCWWGG 2 cut(s) 81, 581
Bst2UI CCWGG 5 cut(s) 91, 395, 542, 755, 1329
Bst4CI ACNGT 5 cut(s) 375, 476, 681, 793, 1011
BstACI GRCGYC 3 cut(s) 48, 60, 360
BstAUI TGTACA 1 cut(s) 817
BstC8I GCNNGC 4 cut(s) 74, 268, 619, 1038
BstDEI CTNAG 6 cut(s) 104, 209, 233, 606, 1029, 1209
BstDSI CCRYGG 2 cut(s) 271, 581
BstF5I GGATG 2 cut(s) 591, 616
BstFNI CGCG 9 cut(s) 36, 72, 74, 97, 174, 273, 619, 621, 669
BstH2I RGCGCY 1 cut(s) 220
BstHHI GCGC 7 cut(s) 36, 74, 76, 97, 219, 619, 621
BstKTI GATC 4 cut(s) 232, 297, 333, 501
BstMAI GTCTC 2 cut(s) 91, 1083
BstMBI GATC 4 cut(s) 229, 294, 330, 498
BstMWI GCNNNNNNNGC 4 cut(s) 33, 214, 611, 1046
BstNI CCWGG 5 cut(s) 91, 395, 542, 755, 1329
BstNSI RCATGY 1 cut(s) 181
BstSCI CCNGG 8 cut(s) 55, 89, 219, 393, 540, 753, 917, 1327
BstSLI GKGCMC 1 cut(s) 569
BstUI CGCG 9 cut(s) 36, 72, 74, 97, 174, 273, 619, 621, 669
BstV1I GCAGC 3 cut(s) 132, 626, 815
BstX2I RGATCY 1 cut(s) 498
BstYI RGATCY 1 cut(s) 498
Bsu15I ATCGAT 1 cut(s) 1125
BsuI GTATCC 1 cut(s) 464
BsuRI GGCC 5 cut(s) 113, 194, 224, 266, 287
BsuTUI ATCGAT 1 cut(s) 1125
BtgI CCRYGG 2 cut(s) 271, 581
BtgZI GCGATG 1 cut(s) 914
BtrI CACGTC 1 cut(s) 1099
BtsCI GGATG 2 cut(s) 591, 616
BveI ACCTGC 1 cut(s) 642
Cac8I GCNNGC 4 cut(s) 74, 268, 619, 1038
CaiI CAGNNNCTG 1 cut(s) 1036
CfoI GCGC 7 cut(s) 36, 74, 76, 97, 219, 619, 621
Cfr13I GGNCC 6 cut(s) 99, 222, 285, 547, 746, 1323
Cfr42I CCGCGG 1 cut(s) 274
ClaI ATCGAT 1 cut(s) 1125
CseI GACGC 2 cut(s) 49, 56
Csp6I GTAC 2 cut(s) 631, 818
CviAII CATG 4 cut(s) 178, 582, 638, 767
CviQI GTAC 2 cut(s) 631, 818
DdeI CTNAG 6 cut(s) 104, 209, 233, 606, 1029, 1209
DpnI GATC 4 cut(s) 231, 296, 332, 500
DpnII GATC 4 cut(s) 229, 294, 330, 498
DraI TTTAAA 1 cut(s) 676
EaeI YGGCCR 1 cut(s) 264
Ecl136II GAGCTC 2 cut(s) 256, 880
Eco130I CCWWGG 2 cut(s) 81, 581
Eco24I GRGCYC 3 cut(s) 57, 258, 882
Eco31I GGTCTC 1 cut(s) 91
Eco47I GGWCC 4 cut(s) 99, 547, 746, 1323
Eco53kI GAGCTC 2 cut(s) 256, 880
Eco57I CTGAAG 1 cut(s) 945
EcoICRI GAGCTC 2 cut(s) 256, 880
EcoO109I RGGNCCY 1 cut(s) 746
EcoRII CCWGG 5 cut(s) 89, 393, 540, 753, 1327
EcoT14I CCWWGG 2 cut(s) 81, 581
EcoT22I ATGCAT 1 cut(s) 531
EcoT38I GRGCYC 3 cut(s) 57, 258, 882
ErhI CCWWGG 2 cut(s) 81, 581
FaeI CATG 4 cut(s) 181, 585, 641, 770
FaqI GGGAC 2 cut(s) 85, 802
FatI CATG 4 cut(s) 177, 581, 637, 766
FauI CCCGC 3 cut(s) 179, 266, 614
FblI GTMKAC 1 cut(s) 990
Fnu4HI GCNGC 6 cut(s) 121, 148, 192, 271, 615, 804
FokI GGATG 2 cut(s) 598, 623
FriOI GRGCYC 3 cut(s) 57, 258, 882
Fsp4HI GCNGC 6 cut(s) 121, 148, 192, 271, 615, 804
FspBI CTAG 2 cut(s) 464, 695
GlaI GCGC 7 cut(s) 35, 73, 75, 96, 218, 618, 620
GluI GCNGC 6 cut(s) 121, 148, 192, 271, 615, 804
GsuI CTGGAG 5 cut(s) 100, 563, 737, 792, 874
HaeII RGCGCY 1 cut(s) 220
HaeIII GGCC 5 cut(s) 113, 194, 224, 266, 287
HapII CCGG 3 cut(s) 57, 220, 919
HgaI GACGC 2 cut(s) 49, 56
HhaI GCGC 7 cut(s) 36, 74, 76, 97, 219, 619, 621
Hin1I GRCGYC 3 cut(s) 48, 60, 360
Hin1II CATG 4 cut(s) 181, 585, 641, 770
Hin6I GCGC 7 cut(s) 34, 72, 74, 95, 217, 617, 619
HinP1I GCGC 7 cut(s) 34, 72, 74, 95, 217, 617, 619
HindIII AAGCTT 1 cut(s) 716
HpaII CCGG 3 cut(s) 57, 220, 919
HphI GGTGA 2 cut(s) 10, 564
Hpy166II GTNNAC 3 cut(s) 517, 991, 1279
Hpy188III TCNNGA 5 cut(s) 608, 809, 853, 1142, 1300
Hpy8I GTNNAC 3 cut(s) 517, 991, 1279
Hpy99I CGWCG 7 cut(s) 41, 44, 47, 50, 65, 347, 365
HpyAV CCTTC 4 cut(s) 205, 256, 885, 998
HpyCH4III ACNGT 5 cut(s) 375, 476, 681, 793, 1011
HpyCH4IV ACGT 3 cut(s) 360, 505, 1098
HpyCH4V TGCA 7 cut(s) 479, 529, 614, 637, 713, 803, 1017
HpyF10VI GCNNNNNNNGC 4 cut(s) 33, 214, 611, 1046
HpyF3I CTNAG 6 cut(s) 104, 209, 233, 606, 1029, 1209
HpySE526I ACGT 3 cut(s) 360, 505, 1098
Hsp92I GRCGYC 3 cut(s) 48, 60, 360
Hsp92II CATG 4 cut(s) 181, 585, 641, 770
HspAI GCGC 7 cut(s) 34, 72, 74, 95, 217, 617, 619
KspI CCGCGG 1 cut(s) 274
Kzo9I GATC 4 cut(s) 229, 294, 330, 498
LmnI GCTCC 5 cut(s) 155, 347, 582, 811, 855
Lsp1109I GCAGC 3 cut(s) 132, 626, 815
LweI GCATC 3 cut(s) 601, 1026, 1049
MaeI CTAG 2 cut(s) 464, 695
MaeII ACGT 3 cut(s) 360, 505, 1098
MaeIII GTNAC 1 cut(s) 1094
MalI GATC 4 cut(s) 231, 296, 332, 500
MbiI CCGCTC 2 cut(s) 150, 577
MboI GATC 4 cut(s) 229, 294, 330, 498
MboII GAAGA 3 cut(s) 494, 653, 1202
MflI RGATCY 1 cut(s) 498
MhlI GDGCHC 4 cut(s) 57, 258, 569, 882
MluCI AATT 3 cut(s) 424, 600, 974
MlyI GAGTC 7 cut(s) 155, 161, 179, 220, 726, 757, 959
MmeI TCCRAC 3 cut(s) 189, 207, 526
Mph1103I ATGCAT 1 cut(s) 531
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 3 cut(s) 414, 596, 675
MspA1I CMGCKG 1 cut(s) 273
MspI CCGG 3 cut(s) 57, 220, 919
MspR9I CCNGG 8 cut(s) 57, 91, 221, 395, 542, 755, 919, 1329
MvaI CCWGG 5 cut(s) 91, 395, 542, 755, 1329
MvnI CGCG 9 cut(s) 36, 72, 74, 97, 174, 273, 619, 621, 669
MwoI GCNNNNNNNGC 4 cut(s) 33, 214, 611, 1046
NciI CCSGG 3 cut(s) 57, 221, 919
NcoI CCATGG 1 cut(s) 581
NdeII GATC 4 cut(s) 229, 294, 330, 498
NlaIII CATG 4 cut(s) 181, 585, 641, 770
NlaIV GGNNCC 5 cut(s) 101, 500, 566, 1237, 1325
NmeAIII GCCGAG 2 cut(s) 76, 167
NmuCI GTSAC 1 cut(s) 1094
NsiI ATGCAT 1 cut(s) 531
NspI RCATGY 1 cut(s) 181
PasI CCCWGGG 1 cut(s) 1328
PauI GCGCGC 2 cut(s) 72, 617
PciI ACATGT 1 cut(s) 177
PcsI WCGNNNNNNNCGW 4 cut(s) 48, 249, 339, 1176
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 4 cut(s) 379, 451, 1217, 1243
PflMI CCANNNNNTGG 1 cut(s) 556
PkrI GCNGC 6 cut(s) 122, 149, 193, 272, 616, 805
PleI GAGTC 7 cut(s) 155, 161, 179, 219, 726, 757, 959
PpsI GAGTC 7 cut(s) 155, 161, 179, 219, 726, 757, 959
PpuMI RGGWCCY 1 cut(s) 746
PscI ACATGT 1 cut(s) 177
PshBI ATTAAT 1 cut(s) 414
Psp124BI GAGCTC 2 cut(s) 258, 882
Psp5II RGGWCCY 1 cut(s) 746
Psp6I CCWGG 5 cut(s) 89, 393, 540, 753, 1327
PspGI CCWGG 5 cut(s) 89, 393, 540, 753, 1327
PspN4I GGNNCC 5 cut(s) 101, 500, 566, 1237, 1325
PspPI GGNCC 6 cut(s) 99, 222, 285, 547, 746, 1323
PspPPI RGGWCCY 1 cut(s) 746
PstNI CAGNNNCTG 1 cut(s) 1036
PsuI RGATCY 1 cut(s) 498
PteI GCGCGC 2 cut(s) 72, 617
RsaI GTAC 2 cut(s) 632, 819
RsaNI GTAC 2 cut(s) 631, 818
SacI GAGCTC 2 cut(s) 258, 882
SacII CCGCGG 1 cut(s) 274
SaqAI TTAA 3 cut(s) 414, 596, 675
SatI GCNGC 6 cut(s) 121, 148, 192, 271, 615, 804
Sau3AI GATC 4 cut(s) 229, 294, 330, 498
Sau96I GGNCC 6 cut(s) 99, 222, 285, 547, 746, 1323
SchI GAGTC 7 cut(s) 155, 161, 179, 220, 726, 757, 959
ScrFI CCNGG 8 cut(s) 57, 91, 221, 395, 542, 755, 919, 1329
SduI GDGCHC 4 cut(s) 57, 258, 569, 882
SfaNI GCATC 3 cut(s) 601, 1026, 1049
Sfr303I CCGCGG 1 cut(s) 274
SgrBI CCGCGG 1 cut(s) 274
SinI GGWCC 4 cut(s) 99, 547, 746, 1323
SmlI CTYRAG 1 cut(s) 1140
SmoI CTYRAG 1 cut(s) 1140
Sse9I AATT 3 cut(s) 424, 600, 974
SspMI CTAG 2 cut(s) 464, 695
SstI GAGCTC 2 cut(s) 258, 882
StyD4I CCNGG 8 cut(s) 55, 89, 219, 393, 540, 753, 917, 1327
StyI CCWWGG 2 cut(s) 81, 581
TaaI ACNGT 5 cut(s) 375, 476, 681, 793, 1011
TaiI ACGT 3 cut(s) 363, 508, 1101
TaqI TCGA 5 cut(s) 159, 997, 1125, 1170, 1260
TasI AATT 3 cut(s) 424, 600, 974
TatI WGTACW 1 cut(s) 817
TauI GCSGC 3 cut(s) 150, 194, 273
TfiI GAWTC 4 cut(s) 379, 451, 1217, 1243
Tru1I TTAA 3 cut(s) 414, 596, 675
Tru9I TTAA 3 cut(s) 414, 596, 675
TseFI GTSAC 1 cut(s) 1094
TseI GCWGC 3 cut(s) 120, 614, 803
Tsp45I GTSAC 1 cut(s) 1094
TspDTI ATGAA 4 cut(s) 17, 504, 654, 1161
TspGWI ACGGA 1 cut(s) 360
Van91I CCANNNNNTGG 1 cut(s) 556
VpaK11BI GGWCC 4 cut(s) 99, 547, 746, 1323
VspI ATTAAT 1 cut(s) 414
XapI RAATTY 2 cut(s) 424, 974
XceI RCATGY 1 cut(s) 181
XmiI GTMKAC 1 cut(s) 990
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 2 cut(s) 464, 695
ZraI GACGTC 1 cut(s) 361
Zsp2I ATGCAT 1 cut(s) 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.