Rorug05G0562300

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Forward (+)
75352849 .. 75355518
2670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0562300.1

Sequence Viewer

Length: 1527 bp
ATGAGGTTCATAAACAAAGACCCAGAAGGATTTGTGCCAATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCGTAAGTAGTCATTCCCAGCTTGCAACTGTATTGCGGAACTCCTCAAAGCTTGTGAGTTCACTTATTTGTGCTCTGGCTGCATTTGGATTAGCTGCATTACTTGTTATATTTTTGTTGGGTGGATTCGTTATTCCCAAAGATAGCATTAAGCCATGGTGGCAATGGGCCTTTTGGGTATCACCACTATCATATGGACAACGCGCTCTTTCTGTCAATGAATTTACTGCTGTAAGGTGGATCAAGATAGCTCCTTTAACAAACAGAACAATTGGGCAAAATGTCCTCCAAGAACACAACATACCAAATGGTGATTATTGGTATTGGATTGGAGTTGGTGGTTTGTTAGCTTATGCATTGCTTTTCAATTGCAGAGTGACTCTGGCCTTGACGTACCTAAATTCACTAAGGAAGTACCAGACAGTGCTTCCACTTGATGACACAGAAGGGAGTCCTGCTGTAGATGGGGGTAAAAATAAGACTGTGTCTAGCCCAAAATTAGCTAGAGTTAACAGCCCAGTAAAGGGAATGATCTTACCATTTCAGCCATTAACAATGACTTTCCACAATGTTACCTACTCTGTTCACAAGCCAAAGGAGATGAAGTCACAAGGTATACCAGAATCGAAGTTGCAACTCTTGTCGAATGTGAGCGGAGTATTCTCACCAGGTATTCTTACAGCTTTAGTTGGGTCTAGTGGAGCTGGAAAGACCACTTTGATGGACGTCCTTGCTGGTAGGAAAACTGGTGGATACATAGAAGGAGATATTAAGATATCTGGTTACCTGAGAGAGCAACATACTTTTGCTAGAGTAGCAGGATATGTTGAGCAAAATGACATACATTCTCCTCAAGTTACAGTTGAGGAGAGTCTATGGTTTTCTTCTGCTCTTCGCTTTCCAAAGGAAGTCAGCACAGAGACAAGACTCGTGTTTGTTGAAGAAGTAATGGAACTAGTAGAGCTTGATACTCTAAGGCATGCTTTGGTTGGTGTGCCAGGCAGTTCAGGCTTATCAACAGAGCAAAGAAAACGCTTAACAATCGCTGTTGAGCTTGTTGCGAACCCGTCAATTATCTTTATGGATGAACCCACATCTGGACTGGACGCAAGGGCAGCAGCCATTGTGATGAGGACTGTTCGTAATACTGTTGATACAGGAAGAACGGTGGTCTGCACTATACACCAACCAAGTATCGACATTTTTGAGGCATTTGACGAGCTTCTTCTTATGAAACGAGGGGGGCAAGTTATATATGGAGGAAAGCTAGGCCAGCACTCCCAGACAATGATAAACTACTTTCAGGAGATTAATGGAATCACTCCGATTCCAAGCGGGTACAATCCAGAAACCTGGATGCTGGAGGTAACCACACAAACTCTACCCAAATCCCAACCAACCTTTCAGCCTAAGACAAATAGGAGAGACTGCAAGATTGGATACCCAAGGTGA

Protein Analysis

508

Amino Acids

56.05

Weight (kDa)

9.27

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 2 - 39 1.4e-07 La domain
ABC2_membrane PF01061 52 - 100 4e-12 ABC-2 type transporter
PDR_assoc PF08370 105 - 167 2e-21 Plant PDR ABC transporter associated
ABC_tran PF00005 239 - 391 3.9e-21 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 804
AccBSI CCGCTC 1 cut(s) 729
AccI GTMKAC 1 cut(s) 691
AccII CGCG 1 cut(s) 279
AciI CCGC 3 cut(s) 112, 729, 1410
AclWI GGATC 1 cut(s) 323
AcsI RAATTY 2 cut(s) 296, 475
AcyI GRCGYC 1 cut(s) 801
AfaI GTAC 3 cut(s) 470, 491, 1415
AfiI CCNNNNNNNGG 3 cut(s) 598, 599, 1172
AgsI TTSAA 3 cut(s) 61, 442, 1016
AhlI ACTAGT 1 cut(s) 1030
AjnI CCWGG 3 cut(s) 742, 1072, 1427
AjuI GAANNNNNNNTTGG 2 cut(s) 1461, 1493
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 2 cut(s) 989, 1494
AlwI GGATC 1 cut(s) 323
AoxI GGCC 4 cut(s) 72, 243, 459, 1345
ApeKI GCWGC 4 cut(s) 155, 170, 1190, 1193
ApoI RAATTY 2 cut(s) 296, 475
AseI ATTAAT 1 cut(s) 1386
AspLEI GCGC 1 cut(s) 281
AspS9I GGNCC 2 cut(s) 73, 243
AsuHPI GGTGA 3 cut(s) 249, 398, 732
BauI CACGAG 1 cut(s) 1004
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 4 cut(s) 142, 157, 1202, 1205
BccI CCATC 2 cut(s) 533, 790
BciT130I CCWGG 3 cut(s) 744, 1074, 1429
BciVI GTATCC 2 cut(s) 821, 1508
BcoDI GTCTC 2 cut(s) 989, 1494
BcuI ACTAGT 1 cut(s) 1030
BfaI CTAG 6 cut(s) 564, 579, 771, 885, 1031, 1343
BfmI CTRYAG 1 cut(s) 534
BfuI GTATCC 2 cut(s) 821, 1508
BglI GCCNNNNNGGC 1 cut(s) 235
BisI GCNGC 4 cut(s) 156, 171, 1191, 1194
BlsI GCNGC 4 cut(s) 157, 172, 1192, 1195
Bme1390I CCNGG 3 cut(s) 744, 1074, 1429
BmgT120I GGNCC 2 cut(s) 73, 243
BmrFI CCNGG 3 cut(s) 744, 1074, 1429
BmrI ACTGGG 1 cut(s) 587
BmsI GCATC 2 cut(s) 62, 1422
BmuI ACTGGG 1 cut(s) 587
BpmI CTGGAG 1 cut(s) 1457
BpuEI CTTGAG 1 cut(s) 912
BsaHI GRCGYC 1 cut(s) 801
BsaJI CCNNGG 2 cut(s) 230, 1520
BsaXI ACNNNNNCTCC 2 cut(s) 665, 695
Bsc4I CCNNNNNNNGG 3 cut(s) 598, 599, 1172
Bse1I ACTGG 3 cut(s) 593, 826, 1182
Bse3DI GCAATG 2 cut(s) 245, 431
BseBI CCWGG 3 cut(s) 744, 1074, 1429
BseDI CCNNGG 2 cut(s) 230, 1520
BseGI GGATG 2 cut(s) 1165, 1437
BseLI CCNNNNNNNGG 3 cut(s) 598, 599, 1172
BseMI GCAATG 2 cut(s) 245, 431
BseMII CTCAG 1 cut(s) 854
BseNI ACTGG 3 cut(s) 593, 826, 1182
BseRI GAGGAG 3 cut(s) 109, 915, 956
BseXI GCAGC 4 cut(s) 142, 157, 1202, 1205
BseYI CCCAGC 1 cut(s) 93
BsgI GTGCAG 1 cut(s) 1234
Bsh1236I CGCG 1 cut(s) 279
BshFI GGCC 4 cut(s) 74, 245, 461, 1347
BsiHKAI GWGCWC 1 cut(s) 151
BslI CCNNNNNNNGG 3 cut(s) 598, 599, 1172
BsmAI GTCTC 2 cut(s) 989, 1494
BsnI GGCC 4 cut(s) 74, 245, 461, 1347
Bsp1286I GDGCHC 1 cut(s) 151
Bsp143I GATC 2 cut(s) 315, 606
Bsp19I CCATGG 1 cut(s) 230
BspACI CCGC 3 cut(s) 112, 729, 1410
BspANI GGCC 4 cut(s) 74, 245, 461, 1347
BspCNI CTCAG 1 cut(s) 855
BspFNI CGCG 1 cut(s) 279
BspPI GGATC 1 cut(s) 323
BspQI GCTCTTC 1 cut(s) 972
BsrBI CCGCTC 1 cut(s) 729
BsrDI GCAATG 2 cut(s) 245, 431
BsrI ACTGG 3 cut(s) 593, 826, 1182
BssECI CCNNGG 2 cut(s) 230, 1520
BssMI GATC 2 cut(s) 315, 606
BssNAI GTATAC 1 cut(s) 692
BssNI GRCGYC 1 cut(s) 801
BssSI CACGAG 1 cut(s) 1004
BssT1I CCWWGG 2 cut(s) 230, 1520
Bst1107I GTATAC 1 cut(s) 692
Bst2BI CACGAG 1 cut(s) 1004
Bst2UI CCWGG 3 cut(s) 744, 1074, 1429
Bst4CI ACNGT 7 cut(s) 106, 499, 559, 937, 1213, 1225, 1243
Bst6I CTCTTC 1 cut(s) 972
BstACI GRCGYC 1 cut(s) 801
BstC8I GCNNGC 3 cut(s) 99, 1056, 1349
BstDEI CTNAG 4 cut(s) 482, 863, 1049, 1485
BstDSI CCRYGG 1 cut(s) 230
BstEII GGTNACC 2 cut(s) 857, 1441
BstF5I GGATG 2 cut(s) 1165, 1437
BstFNI CGCG 1 cut(s) 279
BstHHI GCGC 1 cut(s) 281
BstKTI GATC 2 cut(s) 318, 609
BstMAI GTCTC 2 cut(s) 989, 1494
BstMBI GATC 2 cut(s) 315, 606
BstMWI GCNNNNNNNGC 6 cut(s) 155, 235, 890, 1083, 1190, 1348
BstNI CCWGG 3 cut(s) 744, 1074, 1429
BstNSI RCATGY 1 cut(s) 1058
BstPI GGTNACC 2 cut(s) 857, 1441
BstSCI CCNGG 3 cut(s) 742, 1072, 1427
BstSFI CTRYAG 1 cut(s) 534
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 4 cut(s) 142, 157, 1202, 1205
BstXI CCANNNNNNTGG 2 cut(s) 796, 1428
BstZ17I GTATAC 1 cut(s) 692
BsuI GTATCC 2 cut(s) 821, 1508
BsuRI GGCC 4 cut(s) 74, 245, 461, 1347
BtgI CCRYGG 1 cut(s) 230
BtsCI GGATG 2 cut(s) 1165, 1437
BtsIMutI CAGTG 1 cut(s) 504
Cac8I GCNNGC 3 cut(s) 99, 1056, 1349
CfoI GCGC 1 cut(s) 281
Cfr13I GGNCC 2 cut(s) 73, 243
CseI GACGC 1 cut(s) 1190
CsiI ACCWGGT 1 cut(s) 742
Csp6I GTAC 3 cut(s) 469, 490, 1414
CviAII CATG 2 cut(s) 231, 1055
CviQI GTAC 3 cut(s) 469, 490, 1414
DdeI CTNAG 4 cut(s) 482, 863, 1049, 1485
DpnI GATC 2 cut(s) 317, 608
DpnII GATC 2 cut(s) 315, 606
Eam1104I CTCTTC 1 cut(s) 972
EarI CTCTTC 1 cut(s) 972
Eco130I CCWWGG 2 cut(s) 230, 1520
Eco32I GATATC 1 cut(s) 852
Eco91I GGTNACC 2 cut(s) 857, 1441
EcoO109I RGGNCCY 1 cut(s) 73
EcoO65I GGTNACC 2 cut(s) 857, 1441
EcoRII CCWGG 3 cut(s) 742, 1072, 1427
EcoRV GATATC 1 cut(s) 852
EcoT14I CCWWGG 2 cut(s) 230, 1520
EcoT22I ATGCAT 1 cut(s) 433
ErhI CCWWGG 2 cut(s) 230, 1520
FaeI CATG 2 cut(s) 234, 1058
FalI AAGNNNNNCTT 2 cut(s) 1042, 1074
FatI CATG 2 cut(s) 230, 1054
FauI CCCGC 1 cut(s) 1403
FauNDI CATATG 1 cut(s) 268
FblI GTMKAC 1 cut(s) 691
Fnu4HI GCNGC 4 cut(s) 156, 171, 1191, 1194
FokI GGATG 2 cut(s) 1172, 1444
Fsp4HI GCNGC 4 cut(s) 156, 171, 1191, 1194
FspBI CTAG 6 cut(s) 564, 579, 771, 885, 1031, 1343
GlaI GCGC 1 cut(s) 280
GluI GCNGC 4 cut(s) 156, 171, 1191, 1194
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 1 cut(s) 1457
HaeIII GGCC 4 cut(s) 74, 245, 461, 1347
HgaI GACGC 1 cut(s) 1190
HhaI GCGC 1 cut(s) 281
Hin1I GRCGYC 1 cut(s) 801
Hin1II CATG 2 cut(s) 234, 1058
Hin6I GCGC 1 cut(s) 279
HinP1I GCGC 1 cut(s) 279
HincII GTYRAC 1 cut(s) 586
HindII GTYRAC 1 cut(s) 586
HindIII AAGCTT 1 cut(s) 125
HinfI GANTC 8 cut(s) 201, 454, 526, 698, 946, 1002, 1392, 1402
HpaI GTTAAC 1 cut(s) 586
HphI GGTGA 3 cut(s) 249, 398, 732
Hpy166II GTNNAC 4 cut(s) 137, 586, 661, 692
Hpy188I TCNGA 1 cut(s) 1401
Hpy188III TCNNGA 5 cut(s) 61, 319, 1173, 1379, 1421
Hpy8I GTNNAC 4 cut(s) 137, 586, 661, 692
HpyAV CCTTC 3 cut(s) 20, 515, 830
HpyCH4III ACNGT 7 cut(s) 106, 499, 559, 937, 1213, 1225, 1243
HpyCH4IV ACGT 2 cut(s) 467, 801
HpyCH4V TGCA 9 cut(s) 53, 101, 158, 173, 431, 447, 709, 1251, 1506
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 235, 890, 1083, 1190, 1348
HpyF3I CTNAG 4 cut(s) 482, 863, 1049, 1485
HpySE526I ACGT 2 cut(s) 467, 801
Hsp92I GRCGYC 1 cut(s) 801
Hsp92II CATG 2 cut(s) 234, 1058
HspAI GCGC 1 cut(s) 279
KspAI GTTAAC 1 cut(s) 586
Kzo9I GATC 2 cut(s) 315, 606
LguI GCTCTTC 1 cut(s) 972
LmnI GCTCC 2 cut(s) 331, 776
Lsp1109I GCAGC 4 cut(s) 142, 157, 1202, 1205
LweI GCATC 2 cut(s) 62, 1422
MabI ACCWGGT 1 cut(s) 742
MaeI CTAG 6 cut(s) 564, 579, 771, 885, 1031, 1343
MaeII ACGT 2 cut(s) 467, 801
MaeIII GTNAC 6 cut(s) 451, 646, 681, 857, 931, 1441
MalI GATC 2 cut(s) 317, 608
MbiI CCGCTC 1 cut(s) 729
MboI GATC 2 cut(s) 315, 606
MboII GAAGA 6 cut(s) 76, 951, 959, 1028, 1248, 1292
MfeI CAATTG 2 cut(s) 345, 442
MhlI GDGCHC 1 cut(s) 151
MluCI AATT 6 cut(s) 296, 345, 442, 475, 572, 1146
MlyI GAGTC 4 cut(s) 448, 535, 955, 996
Mph1103I ATGCAT 1 cut(s) 433
MseI TTAA 8 cut(s) 69, 225, 332, 585, 626, 846, 1112, 1386
MslI CAYNNNNRTG 2 cut(s) 794, 1202
MspR9I CCNGG 3 cut(s) 744, 1074, 1429
MunI CAATTG 2 cut(s) 345, 442
MvaI CCWGG 3 cut(s) 744, 1074, 1429
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 6 cut(s) 155, 235, 890, 1083, 1190, 1348
NcoI CCATGG 1 cut(s) 230
NdeI CATATG 1 cut(s) 268
NdeII GATC 2 cut(s) 315, 606
NlaIII CATG 2 cut(s) 234, 1058
NmuCI GTSAC 2 cut(s) 451, 681
NsiI ATGCAT 1 cut(s) 433
NspI RCATGY 1 cut(s) 1058
PaeI GCATGC 1 cut(s) 1058
PciSI GCTCTTC 1 cut(s) 972
PfeI GAWTC 4 cut(s) 201, 698, 1392, 1402
PflFI GACNNNGTC 1 cut(s) 559
PkrI GCNGC 4 cut(s) 157, 172, 1192, 1195
PleI GAGTC 4 cut(s) 448, 534, 954, 996
PpsI GAGTC 4 cut(s) 448, 534, 954, 996
PshBI ATTAAT 1 cut(s) 1386
Psp6I CCWGG 3 cut(s) 742, 1072, 1427
PspEI GGTNACC 2 cut(s) 857, 1441
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 3 cut(s) 742, 1072, 1427
PspPI GGNCC 2 cut(s) 73, 243
PsrI GAACNNNNNNTAC 2 cut(s) 360, 392
PsyI GACNNNGTC 1 cut(s) 559
RsaI GTAC 3 cut(s) 470, 491, 1415
RsaNI GTAC 3 cut(s) 469, 490, 1414
RseI CAYNNNNRTG 2 cut(s) 794, 1202
SapI GCTCTTC 1 cut(s) 972
SaqAI TTAA 8 cut(s) 69, 225, 332, 585, 626, 846, 1112, 1386
SatI GCNGC 4 cut(s) 156, 171, 1191, 1194
Sau3AI GATC 2 cut(s) 315, 606
Sau96I GGNCC 2 cut(s) 73, 243
SchI GAGTC 4 cut(s) 448, 535, 955, 996
ScrFI CCNGG 3 cut(s) 744, 1074, 1429
SduI GDGCHC 1 cut(s) 151
SexAI ACCWGGT 1 cut(s) 742
SfaNI GCATC 2 cut(s) 62, 1422
SfcI CTRYAG 1 cut(s) 534
SmiMI CAYNNNNRTG 2 cut(s) 794, 1202
SmlI CTYRAG 1 cut(s) 927
SmoI CTYRAG 1 cut(s) 927
SpeI ACTAGT 1 cut(s) 1030
SphI GCATGC 1 cut(s) 1058
Sse9I AATT 6 cut(s) 296, 345, 442, 475, 572, 1146
SsiI CCGC 3 cut(s) 112, 729, 1410
SspMI CTAG 6 cut(s) 564, 579, 771, 885, 1031, 1343
StyD4I CCNGG 3 cut(s) 742, 1072, 1427
StyI CCWWGG 2 cut(s) 230, 1520
TaaI ACNGT 7 cut(s) 106, 499, 559, 937, 1213, 1225, 1243
TaiI ACGT 2 cut(s) 470, 804
TaqI TCGA 3 cut(s) 701, 719, 1272
TasI AATT 6 cut(s) 296, 345, 442, 475, 572, 1146
TfiI GAWTC 4 cut(s) 201, 698, 1392, 1402
Tru1I TTAA 8 cut(s) 69, 225, 332, 585, 626, 846, 1112, 1386
Tru9I TTAA 8 cut(s) 69, 225, 332, 585, 626, 846, 1112, 1386
TscAI CASTG 1 cut(s) 504
TseFI GTSAC 2 cut(s) 451, 681
TseI GCWGC 4 cut(s) 155, 170, 1190, 1193
Tsp45I GTSAC 2 cut(s) 451, 681
TspDTI ATGAA 4 cut(s) 309, 692, 1176, 1322
TspRI CASTG 1 cut(s) 504
Tth111I GACNNNGTC 1 cut(s) 559
VspI ATTAAT 1 cut(s) 1386
XapI RAATTY 2 cut(s) 296, 475
XceI RCATGY 1 cut(s) 1058
XcmI CCANNNNNNNNNTGG 2 cut(s) 237, 1174
XmiI GTMKAC 1 cut(s) 691
XspI CTAG 6 cut(s) 564, 579, 771, 885, 1031, 1343
ZraI GACGTC 1 cut(s) 802
Zsp2I ATGCAT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.