Disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 100 - 272 | 2.3e-46 | TIR domain |
| TIR_2 | PF13676 | 103 - 203 | 1.1e-13 | TIR domain |
| NB-ARC | PF00931 | 291 - 458 | 7.4e-31 | NB-ARC domain |
| LRR_8 | PF13855 | 661 - 719 | 2.4e-07 | Leucine rich repeat |
| LRR_14 | PF23598 | 674 - 798 | 4.6e-11 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 957 - 1098 | 1.1e-18 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1037 - 1157 | 6.7e-11 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| TIR | PF01582 | 1201 - 1372 | 4.8e-50 | TIR domain |
| TIR_2 | PF13676 | 1204 - 1301 | 2.3e-15 | TIR domain |
| NB-ARC | PF00931 | 1389 - 1555 | 9.3e-30 | NB-ARC domain |
| LRR_8 | PF13855 | 1759 - 1818 | 1.2e-07 | Leucine rich repeat |
| LRR_14 | PF23598 | 1822 - 1886 | 5.5e-08 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 2048 - 2180 | 1.1e-17 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 2120 - 2240 | 8.2e-09 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 594, 1644, 4050 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 245, 2669, 5960 |
| AatII | GACGTC | 1 cut(s) | 243 |
| Acc36I | ACCTGC | 1 cut(s) | 621 |
| AccI | GTMKAC | 5 cut(s) | 330, 930, 1432, 4227, 4729 |
| AccII | CGCG | 1 cut(s) | 337 |
| AccIII | TCCGGA | 2 cut(s) | 2659, 5950 |
| AciI | CCGC | 6 cut(s) | 56, 1361, 1776, 2562, 5376, 5452 |
| AcoI | YGGCCR | 4 cut(s) | 1852, 1895, 5189, 6447 |
| AcuI | CTGAAG | 6 cut(s) | 304, 1866, 2924, 2972, 5163, 6170 |
| AcvI | CACGTG | 2 cut(s) | 4703, 6419 |
| AcyI | GRCGYC | 2 cut(s) | 240, 4242 |
| AdeI | CACNNNGTG | 1 cut(s) | 3819 |
| AfaI | GTAC | 9 cut(s) | 615, 981, 2369, 2635, 3398, 3912, 5651, 5926, 6647 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 124, 159, 2268, 3301, 5565, 6456, 6547 |
| AflII | CTTAAG | 3 cut(s) | 92, 656, 2725 |
| AflIII | ACRYGT | 3 cut(s) | 335, 970, 2831 |
| AgeI | ACCGGT | 1 cut(s) | 3535 |
| AjnI | CCWGG | 6 cut(s) | 1151, 2892, 3183, 6178, 6429, 6468 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 2760, 2792, 4835, 4867, 6051, 6083 |
| Alw21I | GWGCWC | 1 cut(s) | 4279 |
| Ama87I | CYCGRG | 2 cut(s) | 1719, 5016 |
| Aor13HI | TCCGGA | 2 cut(s) | 2659, 5950 |
| AoxI | GGCC | 9 cut(s) | 912, 1461, 1852, 1895, 4209, 4758, 5146, 5189, 6447 |
| ApaI | GGGCCC | 2 cut(s) | 1465, 4762 |
| AsiGI | ACCGGT | 1 cut(s) | 3535 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 113, 876, 5029, 6371 |
| AspLEI | GCGC | 5 cut(s) | 898, 1344, 1427, 4195, 4724 |
| AspS9I | GGNCC | 7 cut(s) | 1293, 1461, 1462, 1747, 3161, 4758, 4759 |
| AsuC2I | CCSGG | 3 cut(s) | 733, 4450, 4832 |
| AsuII | TTCGAA | 1 cut(s) | 3657 |
| AvaI | CYCGRG | 2 cut(s) | 1719, 5016 |
| AvaII | GGWCC | 3 cut(s) | 1293, 1747, 3161 |
| BaeGI | GKGCMC | 2 cut(s) | 1465, 4762 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 6111, 6144 |
| BalI | TGGCCA | 4 cut(s) | 1854, 1897, 5191, 6449 |
| BamHI | GGATCC | 3 cut(s) | 1155, 3898, 4452 |
| BanII | GRGCYC | 4 cut(s) | 1120, 1465, 1720, 4762 |
| BbrPI | CACGTG | 2 cut(s) | 4703, 6419 |
| BbsI | GAAGAC | 6 cut(s) | 1106, 1362, 3867, 4403, 5909, 6599 |
| Bbv12I | GWGCWC | 1 cut(s) | 4279 |
| BceAI | ACGGC | 4 cut(s) | 465, 949, 1839, 3771 |
| BciT130I | CCWGG | 6 cut(s) | 1153, 2894, 3185, 6180, 6431, 6470 |
| BciVI | GTATCC | 5 cut(s) | 1039, 1813, 3295, 4336, 6541 |
| BclI | TGATCA | 1 cut(s) | 1579 |
| BcnI | CCSGG | 3 cut(s) | 733, 4450, 4832 |
| BfmI | CTRYAG | 2 cut(s) | 2289, 6190 |
| BfoI | RGCGCY | 2 cut(s) | 899, 1345 |
| BfrI | CTTAAG | 3 cut(s) | 92, 656, 2725 |
| BfuAI | ACCTGC | 1 cut(s) | 621 |
| BfuI | GTATCC | 5 cut(s) | 1039, 1813, 3295, 4336, 6541 |
| BglII | AGATCT | 3 cut(s) | 3130, 5368, 6775 |
| BmcAI | AGTACT | 2 cut(s) | 2635, 5926 |
| Bme1390I | CCNGG | 9 cut(s) | 733, 1153, 2894, 3185, 4450, 4832, 6180, 6431, 6470 |
| Bme18I | GGWCC | 3 cut(s) | 1293, 1747, 3161 |
| BmeT110I | CYCGRG | 2 cut(s) | 1719, 5016 |
| BmgT120I | GGNCC | 7 cut(s) | 1293, 1461, 1462, 1747, 3161, 4758, 4759 |
| BmrFI | CCNGG | 9 cut(s) | 733, 1153, 2894, 3185, 4450, 4832, 6180, 6431, 6470 |
| BmrI | ACTGGG | 3 cut(s) | 2401, 3509, 5683 |
| BmuI | ACTGGG | 3 cut(s) | 2401, 3509, 5683 |
| BpiI | GAAGAC | 6 cut(s) | 1106, 1362, 3867, 4403, 5909, 6599 |
| BpmI | CTGGAG | 2 cut(s) | 1973, 5267 |
| Bpu14I | TTCGAA | 1 cut(s) | 3657 |
| BpuEI | CTTGAG | 6 cut(s) | 1076, 2219, 2323, 2641, 4139, 5516 |
| BpuMI | CCSGG | 3 cut(s) | 733, 4450, 4832 |
| BsaAI | YACGTR | 3 cut(s) | 294, 4703, 6419 |
| BsaHI | GRCGYC | 2 cut(s) | 240, 4242 |
| BsaWI | WCCGGW | 3 cut(s) | 2659, 3535, 5950 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 124, 159, 2268, 3301, 5565, 6456, 6547 |
| Bse118I | RCCGGY | 3 cut(s) | 1427, 3535, 4724 |
| Bse3DI | GCAATG | 3 cut(s) | 74, 3332, 5663 |
| BseAI | TCCGGA | 2 cut(s) | 2659, 5950 |
| BseBI | CCWGG | 6 cut(s) | 1153, 2894, 3185, 6180, 6431, 6470 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 124, 159, 2268, 3301, 5565, 6456, 6547 |
| BseMI | GCAATG | 3 cut(s) | 74, 3332, 5663 |
| BseMII | CTCAG | 9 cut(s) | 2685, 3101, 3266, 5976, 5984, 6347, 6512, 6692, 6770 |
| BseRI | GAGGAG | 1 cut(s) | 4406 |
| BseSI | GKGCMC | 2 cut(s) | 1465, 4762 |
| BseYI | CCCAGC | 2 cut(s) | 1078, 4375 |
| BsgI | GTGCAG | 4 cut(s) | 1485, 1763, 3540, 4007 |
| Bsh1236I | CGCG | 1 cut(s) | 337 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3670 |
| BshFI | GGCC | 9 cut(s) | 914, 1463, 1854, 1897, 4211, 4760, 5148, 5191, 6449 |
| BshTI | ACCGGT | 1 cut(s) | 3535 |
| BsiEI | CGRYCG | 1 cut(s) | 3670 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4279 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1719, 5016 |
| BsiSI | CCGG | 9 cut(s) | 732, 1428, 2660, 3536, 4449, 4725, 4832, 5951, 6341 |
| BslFI | GGGAC | 4 cut(s) | 1306, 2402, 5684, 6719 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 124, 159, 2268, 3301, 5565, 6456, 6547 |
| BsmBI | CGTCTC | 2 cut(s) | 549, 1524 |
| BsmFI | GGGAC | 4 cut(s) | 1306, 2402, 5684, 6719 |
| BsnI | GGCC | 9 cut(s) | 914, 1463, 1854, 1897, 4211, 4760, 5148, 5191, 6449 |
| BsoBI | CYCGRG | 2 cut(s) | 1719, 5016 |
| Bsp119I | TTCGAA | 1 cut(s) | 3657 |
| Bsp120I | GGGCCC | 2 cut(s) | 1461, 4758 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1120, 1465, 1720, 4279, 4762 |
| Bsp13I | TCCGGA | 2 cut(s) | 2659, 5950 |
| Bsp1407I | TGTACA | 4 cut(s) | 979, 2367, 3396, 5649 |
| Bsp19I | CCATGG | 1 cut(s) | 2646 |
| BspACI | CCGC | 6 cut(s) | 56, 1361, 1776, 2562, 5376, 5452 |
| BspANI | GGCC | 9 cut(s) | 914, 1463, 1854, 1897, 4211, 4760, 5148, 5191, 6449 |
| BspCNI | CTCAG | 9 cut(s) | 2686, 3102, 3265, 5977, 5985, 6348, 6511, 6693, 6771 |
| BspEI | TCCGGA | 2 cut(s) | 2659, 5950 |
| BspFNI | CGCG | 1 cut(s) | 337 |
| BspHI | TCATGA | 4 cut(s) | 880, 888, 4185, 4584 |
| BspMAI | CTGCAG | 2 cut(s) | 2293, 6194 |
| BspMI | ACCTGC | 1 cut(s) | 621 |
| BspQI | GCTCTTC | 4 cut(s) | 2355, 3917, 4405, 5637 |
| BspT104I | TTCGAA | 1 cut(s) | 3657 |
| BspTI | CTTAAG | 3 cut(s) | 92, 656, 2725 |
| BsrDI | GCAATG | 3 cut(s) | 74, 3332, 5663 |
| BsrFI | RCCGGY | 3 cut(s) | 1427, 3535, 4724 |
| BsrGI | TGTACA | 4 cut(s) | 979, 2367, 3396, 5649 |
| BssAI | RCCGGY | 3 cut(s) | 1427, 3535, 4724 |
| BssNI | GRCGYC | 2 cut(s) | 240, 4242 |
| BssT1I | CCWWGG | 4 cut(s) | 1863, 2646, 3223, 5910 |
| Bst2UI | CCWGG | 6 cut(s) | 1153, 2894, 3185, 6180, 6431, 6470 |
| Bst4CI | ACNGT | 8 cut(s) | 2753, 3047, 3349, 3415, 5849, 6044, 6598, 6664 |
| BstACI | GRCGYC | 2 cut(s) | 240, 4242 |
| BstAFI | CTTAAG | 3 cut(s) | 92, 656, 2725 |
| BstAUI | TGTACA | 4 cut(s) | 979, 2367, 3396, 5649 |
| BstBAI | YACGTR | 3 cut(s) | 294, 4703, 6419 |
| BstBI | TTCGAA | 1 cut(s) | 3657 |
| BstDSI | CCRYGG | 3 cut(s) | 2646, 2752, 6043 |
| BstFNI | CGCG | 1 cut(s) | 337 |
| BstH2I | RGCGCY | 2 cut(s) | 899, 1345 |
| BstHHI | GCGC | 5 cut(s) | 898, 1344, 1427, 4195, 4724 |
| BstMCI | CGRYCG | 1 cut(s) | 3670 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 942, 1448, 2371, 4157, 4745, 5653, 5841 |
| BstNI | CCWGG | 6 cut(s) | 1153, 2894, 3185, 6180, 6431, 6470 |
| BstNSI | RCATGY | 6 cut(s) | 974, 1563, 2374, 2835, 5008, 5656 |
| BstSCI | CCNGG | 9 cut(s) | 731, 1151, 2892, 3183, 4448, 4830, 6178, 6429, 6468 |
| BstSFI | CTRYAG | 2 cut(s) | 2289, 6190 |
| BstSLI | GKGCMC | 2 cut(s) | 1465, 4762 |
| BstUI | CGCG | 1 cut(s) | 337 |
| BstV2I | GAAGAC | 6 cut(s) | 1106, 1362, 3867, 4403, 5909, 6599 |
| BsuI | GTATCC | 5 cut(s) | 1039, 1813, 3295, 4336, 6541 |
| BsuRI | GGCC | 9 cut(s) | 914, 1463, 1854, 1897, 4211, 4760, 5148, 5191, 6449 |
| BtgI | CCRYGG | 3 cut(s) | 2646, 2752, 6043 |
| BtsI | GCAGTG | 3 cut(s) | 701, 3998, 6393 |
| BveI | ACCTGC | 1 cut(s) | 621 |
| CciI | TCATGA | 4 cut(s) | 880, 888, 4185, 4584 |
| CfoI | GCGC | 5 cut(s) | 898, 1344, 1427, 4195, 4724 |
| Cfr10I | RCCGGY | 3 cut(s) | 1427, 3535, 4724 |
| Cfr13I | GGNCC | 7 cut(s) | 1293, 1461, 1462, 1747, 3161, 4758, 4759 |
| CseI | GACGC | 4 cut(s) | 1506, 4231, 5081, 6392 |
| Csp6I | GTAC | 9 cut(s) | 614, 980, 2368, 2634, 3397, 3911, 5650, 5925, 6646 |
| CspAI | ACCGGT | 1 cut(s) | 3535 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 904, 939, 4201, 4236 |
| CviQI | GTAC | 9 cut(s) | 614, 980, 2368, 2634, 3397, 3911, 5650, 5925, 6646 |
| DraI | TTTAAA | 6 cut(s) | 754, 4008, 4126, 4156, 4384, 5316 |
| DraIII | CACNNNGTG | 1 cut(s) | 3819 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 245, 2669, 5960 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 245, 2669, 5960 |
| EaeI | YGGCCR | 4 cut(s) | 1852, 1895, 5189, 6447 |
| Eco130I | CCWWGG | 4 cut(s) | 1863, 2646, 3223, 5910 |
| Eco24I | GRGCYC | 4 cut(s) | 1120, 1465, 1720, 4762 |
| Eco32I | GATATC | 5 cut(s) | 2340, 3917, 4945, 5622, 6632 |
| Eco47I | GGWCC | 3 cut(s) | 1293, 1747, 3161 |
| Eco57I | CTGAAG | 6 cut(s) | 304, 1866, 2924, 2972, 5163, 6170 |
| Eco72I | CACGTG | 2 cut(s) | 4703, 6419 |
| Eco88I | CYCGRG | 2 cut(s) | 1719, 5016 |
| EcoO109I | RGGNCCY | 6 cut(s) | 1293, 1461, 1462, 1747, 4758, 4759 |
| EcoRI | GAATTC | 4 cut(s) | 576, 1209, 3873, 4506 |
| EcoRII | CCWGG | 6 cut(s) | 1151, 2892, 3183, 6178, 6429, 6468 |
| EcoRV | GATATC | 5 cut(s) | 2340, 3917, 4945, 5622, 6632 |
| EcoT14I | CCWWGG | 4 cut(s) | 1863, 2646, 3223, 5910 |
| EcoT22I | ATGCAT | 6 cut(s) | 1565, 1806, 2383, 3854, 4862, 5103 |
| EcoT38I | GRGCYC | 4 cut(s) | 1120, 1465, 1720, 4762 |
| ErhI | CCWWGG | 4 cut(s) | 1863, 2646, 3223, 5910 |
| Esp3I | CGTCTC | 2 cut(s) | 549, 1524 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 984, 1016 |
| FaqI | GGGAC | 4 cut(s) | 1306, 2402, 5684, 6719 |
| FauI | CCCGC | 1 cut(s) | 1354 |
| FauNDI | CATATG | 2 cut(s) | 3152, 6398 |
| FbaI | TGATCA | 1 cut(s) | 1579 |
| FblI | GTMKAC | 5 cut(s) | 330, 930, 1432, 4227, 4729 |
| FriOI | GRGCYC | 4 cut(s) | 1120, 1465, 1720, 4762 |
| GlaI | GCGC | 5 cut(s) | 897, 1343, 1426, 4194, 4723 |
| GsaI | CCCAGC | 2 cut(s) | 1082, 4379 |
| GsuI | CTGGAG | 2 cut(s) | 1973, 5267 |
| HaeII | RGCGCY | 2 cut(s) | 899, 1345 |
| HaeIII | GGCC | 9 cut(s) | 914, 1463, 1854, 1897, 4211, 4760, 5148, 5191, 6449 |
| HapII | CCGG | 9 cut(s) | 732, 1428, 2660, 3536, 4449, 4725, 4832, 5951, 6341 |
| HgaI | GACGC | 4 cut(s) | 1506, 4231, 5081, 6392 |
| HhaI | GCGC | 5 cut(s) | 898, 1344, 1427, 4195, 4724 |
| Hin1I | GRCGYC | 2 cut(s) | 240, 4242 |
| Hin6I | GCGC | 5 cut(s) | 896, 1342, 1425, 4193, 4722 |
| HinP1I | GCGC | 5 cut(s) | 896, 1342, 1425, 4193, 4722 |
| HincII | GTYRAC | 3 cut(s) | 238, 2674, 5965 |
| HindII | GTYRAC | 3 cut(s) | 238, 2674, 5965 |
| HindIII | AAGCTT | 6 cut(s) | 653, 998, 2133, 2195, 5430, 5492 |
| HpaII | CCGG | 9 cut(s) | 732, 1428, 2660, 3536, 4449, 4725, 4832, 5951, 6341 |
| Hpy99I | CGWCG | 4 cut(s) | 245, 4247, 4806, 5849 |
| HpyCH4III | ACNGT | 8 cut(s) | 2753, 3047, 3349, 3415, 5849, 6044, 6598, 6664 |
| HpyCH4IV | ACGT | 6 cut(s) | 144, 240, 293, 3138, 4702, 6418 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 942, 1448, 2371, 4157, 4745, 5653, 5841 |
| HpySE526I | ACGT | 6 cut(s) | 144, 240, 293, 3138, 4702, 6418 |
| Hsp92I | GRCGYC | 2 cut(s) | 240, 4242 |
| HspAI | GCGC | 5 cut(s) | 896, 1342, 1425, 4193, 4722 |
| KflI | GGGWCCC | 1 cut(s) | 1293 |
| Kpn2I | TCCGGA | 2 cut(s) | 2659, 5950 |
| Ksp22I | TGATCA | 1 cut(s) | 1579 |
| LguI | GCTCTTC | 4 cut(s) | 2355, 3917, 4405, 5637 |
| LmnI | GCTCC | 7 cut(s) | 292, 691, 3172, 3595, 4274, 4638, 6418 |
| MaeII | ACGT | 6 cut(s) | 144, 240, 293, 3138, 4702, 6418 |
| MaeIII | GTNAC | 9 cut(s) | 133, 185, 2729, 2760, 2925, 6020, 6051, 6171, 6224 |
| MfeI | CAATTG | 9 cut(s) | 453, 1653, 3197, 3211, 3266, 4950, 5552, 6486, 6512 |
| MhlI | GDGCHC | 5 cut(s) | 1120, 1465, 1720, 4279, 4762 |
| MlsI | TGGCCA | 4 cut(s) | 1854, 1897, 5191, 6449 |
| MluI | ACGCGT | 1 cut(s) | 335 |
| MluNI | TGGCCA | 4 cut(s) | 1854, 1897, 5191, 6449 |
| MlyI | GAGTC | 8 cut(s) | 569, 936, 1718, 2076, 2632, 4233, 5370, 6790 |
| MmeI | TCCRAC | 5 cut(s) | 928, 2850, 4225, 4252, 5876 |
| Mox20I | TGGCCA | 4 cut(s) | 1854, 1897, 5191, 6449 |
| Mph1103I | ATGCAT | 6 cut(s) | 1565, 1806, 2383, 3854, 4862, 5103 |
| MroI | TCCGGA | 2 cut(s) | 2659, 5950 |
| MroXI | GAANNNNTTC | 4 cut(s) | 113, 876, 5029, 6371 |
| MscI | TGGCCA | 4 cut(s) | 1854, 1897, 5191, 6449 |
| MslI | CAYNNNNRTG | 5 cut(s) | 606, 975, 2645, 2738, 6029 |
| Msp20I | TGGCCA | 4 cut(s) | 1854, 1897, 5191, 6449 |
| MspA1I | CMGCKG | 2 cut(s) | 275, 3578 |
| MspCI | CTTAAG | 3 cut(s) | 92, 656, 2725 |
| MspI | CCGG | 9 cut(s) | 732, 1428, 2660, 3536, 4449, 4725, 4832, 5951, 6341 |
| MspR9I | CCNGG | 9 cut(s) | 733, 1153, 2894, 3185, 4450, 4832, 6180, 6431, 6470 |
| MunI | CAATTG | 9 cut(s) | 453, 1653, 3197, 3211, 3266, 4950, 5552, 6486, 6512 |
| MvaI | CCWGG | 6 cut(s) | 1153, 2894, 3185, 6180, 6431, 6470 |
| MvnI | CGCG | 1 cut(s) | 337 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 942, 1448, 2371, 4157, 4745, 5653, 5841 |
| NciI | CCSGG | 3 cut(s) | 733, 4450, 4832 |
| NcoI | CCATGG | 1 cut(s) | 2646 |
| NdeI | CATATG | 2 cut(s) | 3152, 6398 |
| NmuCI | GTSAC | 1 cut(s) | 133 |
| NsiI | ATGCAT | 6 cut(s) | 1565, 1806, 2383, 3854, 4862, 5103 |
| NspI | RCATGY | 6 cut(s) | 974, 1563, 2374, 2835, 5008, 5656 |
| NspV | TTCGAA | 1 cut(s) | 3657 |
| PaeI | GCATGC | 1 cut(s) | 1563 |
| PagI | TCATGA | 4 cut(s) | 880, 888, 4185, 4584 |
| PciI | ACATGT | 2 cut(s) | 970, 2831 |
| PciSI | GCTCTTC | 4 cut(s) | 2355, 3917, 4405, 5637 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 564, 3663 |
| PdmI | GAANNNNTTC | 4 cut(s) | 113, 876, 5029, 6371 |
| PfoI | TCCNGGA | 1 cut(s) | 4830 |
| PinAI | ACCGGT | 1 cut(s) | 3535 |
| Ple19I | CGATCG | 1 cut(s) | 3670 |
| PleI | GAGTC | 8 cut(s) | 568, 935, 1718, 2075, 2631, 4232, 5369, 6789 |
| PmaCI | CACGTG | 2 cut(s) | 4703, 6419 |
| PmlI | CACGTG | 2 cut(s) | 4703, 6419 |
| PpsI | GAGTC | 8 cut(s) | 568, 935, 1718, 2075, 2631, 4232, 5369, 6789 |
| Ppu21I | YACGTR | 3 cut(s) | 294, 4703, 6419 |
| PpuMI | RGGWCCY | 2 cut(s) | 1293, 1747 |
| PscI | ACATGT | 2 cut(s) | 970, 2831 |
| PsiI | TTATAA | 3 cut(s) | 594, 1644, 4050 |
| Psp5II | RGGWCCY | 2 cut(s) | 1293, 1747 |
| Psp6I | CCWGG | 6 cut(s) | 1151, 2892, 3183, 6178, 6429, 6468 |
| PspCI | CACGTG | 2 cut(s) | 4703, 6419 |
| PspFI | CCCAGC | 2 cut(s) | 1078, 4375 |
| PspGI | CCWGG | 6 cut(s) | 1151, 2892, 3183, 6178, 6429, 6468 |
| PspOMI | GGGCCC | 2 cut(s) | 1461, 4758 |
| PspPI | GGNCC | 7 cut(s) | 1293, 1461, 1462, 1747, 3161, 4758, 4759 |
| PspPPI | RGGWCCY | 2 cut(s) | 1293, 1747 |
| PstI | CTGCAG | 2 cut(s) | 2293, 6194 |
| PvuI | CGATCG | 1 cut(s) | 3670 |
| PvuII | CAGCTG | 2 cut(s) | 275, 3578 |
| RsaI | GTAC | 9 cut(s) | 615, 981, 2369, 2635, 3398, 3912, 5651, 5926, 6647 |
| RsaNI | GTAC | 9 cut(s) | 614, 980, 2368, 2634, 3397, 3911, 5650, 5925, 6646 |
| RseI | CAYNNNNRTG | 5 cut(s) | 606, 975, 2645, 2738, 6029 |
| SapI | GCTCTTC | 4 cut(s) | 2355, 3917, 4405, 5637 |
| Sau96I | GGNCC | 7 cut(s) | 1293, 1461, 1462, 1747, 3161, 4758, 4759 |
| ScaI | AGTACT | 2 cut(s) | 2635, 5926 |
| SchI | GAGTC | 8 cut(s) | 569, 936, 1718, 2076, 2632, 4233, 5370, 6790 |
| ScrFI | CCNGG | 9 cut(s) | 733, 1153, 2894, 3185, 4450, 4832, 6180, 6431, 6470 |
| SduI | GDGCHC | 5 cut(s) | 1120, 1465, 1720, 4279, 4762 |
| SfcI | CTRYAG | 2 cut(s) | 2289, 6190 |
| SfuI | TTCGAA | 1 cut(s) | 3657 |
| SinI | GGWCC | 3 cut(s) | 1293, 1747, 3161 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 606, 975, 2645, 2738, 6029 |
| SmlI | CTYRAG | 9 cut(s) | 92, 656, 1091, 2198, 2302, 2620, 2725, 4118, 5495 |
| SmoI | CTYRAG | 9 cut(s) | 92, 656, 1091, 2198, 2302, 2620, 2725, 4118, 5495 |
| SphI | GCATGC | 1 cut(s) | 1563 |
| SsiI | CCGC | 6 cut(s) | 56, 1361, 1776, 2562, 5376, 5452 |
| SspI | AATATT | 3 cut(s) | 346, 2431, 5713 |
| StyD4I | CCNGG | 9 cut(s) | 731, 1151, 2892, 3183, 4448, 4830, 6178, 6429, 6468 |
| StyI | CCWWGG | 4 cut(s) | 1863, 2646, 3223, 5910 |
| TaaI | ACNGT | 8 cut(s) | 2753, 3047, 3349, 3415, 5849, 6044, 6598, 6664 |
| TaiI | ACGT | 6 cut(s) | 147, 243, 296, 3141, 4705, 6421 |
| TatI | WGTACW | 6 cut(s) | 979, 2367, 2633, 3396, 5649, 5924 |
| TauI | GCSGC | 3 cut(s) | 2565, 5379, 5454 |
| TseFI | GTSAC | 1 cut(s) | 133 |
| Tsp45I | GTSAC | 1 cut(s) | 133 |
| TspGWI | ACGGA | 7 cut(s) | 65, 777, 1118, 1523, 1803, 4245, 4797 |
| Vha464I | CTTAAG | 3 cut(s) | 92, 656, 2725 |
| VpaK11BI | GGWCC | 3 cut(s) | 1293, 1747, 3161 |
| XbaI | TCTAGA | 2 cut(s) | 3133, 6379 |
| XceI | RCATGY | 6 cut(s) | 974, 1563, 2374, 2835, 5008, 5656 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3820 |
| XmiI | GTMKAC | 5 cut(s) | 330, 930, 1432, 4227, 4729 |
| XmnI | GAANNNNTTC | 4 cut(s) | 113, 876, 5029, 6371 |
| ZraI | GACGTC | 1 cut(s) | 241 |
| ZrmI | AGTACT | 2 cut(s) | 2635, 5926 |
| Zsp2I | ATGCAT | 6 cut(s) | 1565, 1806, 2383, 3854, 4862, 5103 |