Rw7G029270

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000085
Physical Location & Seq
Reverse (-)
40448630 .. 40452504
3875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G029270.1

Sequence Viewer

Length: 2004 bp
ATGGCCCTGCTTAGAGCCTCAGCTGAACCGGCTTCTCCTCGTCGGTGGAAGCATGATGTGTTTTTAAGTTTCAGGGGTGAAGACACCCGCAAGGGCATTGTTTCCCATTTATACGATGAGCTGCAAAACAGGAGAGGGATTAAAACATTCAAGGATGATCAGCAGCTTGAAATAGGGACAGCTATTTCTCCAAGTCTCCTAACGGCAATCCAAGAATCATGGTTTGCCATCATCGTTCTCTCGCCAAATTATGCTTCTTCTTCTTGGTGTTTGGATGAACTTACACACATTTTTCAATGCATGGAAGACAAGAACAGAATTCTGCCTCTTTTTTATCACGTTGATCCCTCTGATGTACGCCATCAAAGGGGAAGTTTTCAAGTAGCCTTCACTAAACATGAACAACAGTCTAGGCAAGACATGGACAAGGTCAAGCAGTGGAGAGATGCTTTAAATAAAGTTGCCTATCTCTGTGGCTGGGATGCCAAGAATTATGTATCCGAAAGAGAGCTTGTCAAAAGCATTGTGACATTTGTGTGCAGCAAAGTACTTCAAGTTTCACGACCTATTGAAATCGAGTGTATAATGCATACTGGAGATTTTGAGGCATTTGAAGCAACCAGACAAGCTATGGATAAGGTCGTGTCGGCACTTAAAGATGATAACATCACTGTCATTGGCATAAACGGAATGGGAGGTGTTGGCAAAACAACCATGGTTACATATGTCAGTTCACAAGCCAAAAGAGACGGGATCTTCGATCATGTGATTATGGCTTGTATATCTGAAAACCCTGACCTGATCAAAATTCAAGGCATATTAGCAGATTTGTTGGGAATGCAATTGAAAGAGGAGACAGAAATTGGAAGAGCTGGTAGATTGAAGGATAGAATAATGAGAGGAAATAGGATTCTTATAATCTTGGACGACATGTGGAAGAATATAAATTTATCAAGCATAGGAATTCCCAGCTACAATGAGCTTAGAAAGTGTAATTCTAAACTCTTGCTCACCACAAGGAGATTATCTGTTTGTCAAGTCATGAGGAGCCAAGCAATCATCCCTCTTAACATCCTATCAAAAGAAGATTCTTGGAGCTTGTTTGTAAAGGAAGTGGGACATTCTTTTCATGAATCCACCAGATTTTATGATATAGCGAGGAAGGTAGTTAGAGAATGTGCTGGTCTCCCAATTGCATTGATAACAGTTGCAAGGGCACTGCAATATAAAGACATGGATGAATGGGAAGAAGCAGCTCGACGACTAGGGATGTCTCAACCTGTCAGCCTTGATGATGAGGGAGATGTTTTCAAATGTATAAAGTTGAGCTATGATTACTTGAAAAGTGATCTTGCCAAGTCATGCTTCTTGCTTTGCTGTCTATTCCCAGAAGACTATGACATCCGCATTGAAGACTTGCTTAAATATGGGATCAGTCATGGTTTATTTCGAGATTCCAACACCATGAATGAAGCCAGAGCCATAATCCATTCGGTGGTCAAGTACCTTAAAGCATCAAACTTGCTTTTAGACAGTGAAATAGATGGATGTGTAAGGATGCATGATGTCATTCGGGATATGGCCATATCAACTACATTATCCGAGAACAACAATGGGTTTTTGGTGAAAGCTGGTTTACACAACCTTTCCGAAGAGTTGAAAAGGTCTCGAGTTGAGGAGCGATGGGAGCGTTTAGTCGGTGCAGTATTATGTTGGAAAAGAAAGGAATCAACTTTTGAAAATGGGAGCCATGGTATTGGCATTGATGCAAGTGTTCAATCTCCATGGCTTGCTAATTGGGAAGTTCAGGAAATCCTGAAAGTTGCTGATGAAATCCAACATAATGATCCCATTGTCAGTAGAATTTTATGCGAGCACGGTTATAAATTGGCACATTTGAATTCTAATAGTGACCGAAGGGGAGTATTACAACTCAAGATTGGATTGATGACTTGCTTCAAGGTGGACATCTTGTCAACATTGCTCAACTGCGTATTATGTTGA

Protein Analysis

667

Amino Acids

75.9

Weight (kDa)

6.54

Isoelectric Point (pI)

49.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 17 - 184 7.5e-52 TIR domain
TIR_2 PF13676 20 - 133 6.1e-16 TIR domain
NB-ARC PF00931 209 - 374 9.5e-29 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 917, 1884
AccB7I CCANNNNNTGG 1 cut(s) 1495
AciI CCGC 2 cut(s) 88, 1405
AclWI GGATC 4 cut(s) 338, 761, 1439, 1841
AcoI YGGCCR 1 cut(s) 1581
AcsI RAATTY 6 cut(s) 318, 807, 946, 963, 1863, 1900
AfaI GTAC 3 cut(s) 357, 549, 1505
AfiI CCNNNNNNNGG 2 cut(s) 367, 1495
AflIII ACRYGT 1 cut(s) 930
AhdI GACNNNNNGTC 1 cut(s) 1972
AjuI GAANNNNNNNTTGG 4 cut(s) 238, 270, 1349, 1381
Alw21I GWGCWC 1 cut(s) 1878
Alw26I GTCTC 6 cut(s) 200, 741, 848, 1190, 1278, 1671
AlwI GGATC 4 cut(s) 338, 761, 1439, 1841
Ama87I CYCGRG 1 cut(s) 1668
AoxI GGCC 2 cut(s) 3, 1581
ApeKI GCWGC 4 cut(s) 121, 163, 540, 1253
ApoI RAATTY 6 cut(s) 318, 807, 946, 963, 1863, 1900
ArsI GACNNNNNNTTYG 2 cut(s) 740, 772
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 3 cut(s) 89, 1003, 1636
AvaI CYCGRG 1 cut(s) 1668
BaeGI GKGCMC 1 cut(s) 1219
BalI TGGCCA 1 cut(s) 1583
BbsI GAAGAC 4 cut(s) 87, 312, 1398, 1419
Bbv12I GWGCWC 1 cut(s) 1878
BbvCI CCTCAGC 1 cut(s) 19
BbvI GCAGC 4 cut(s) 108, 175, 552, 1265
BccI CCATC 4 cut(s) 236, 369, 1538, 1677
BceAI ACGGC 1 cut(s) 219
BciVI GTATCC 1 cut(s) 508
BclI TGATCA 2 cut(s) 157, 801
BcoDI GTCTC 6 cut(s) 200, 741, 848, 1190, 1278, 1671
BfaI CTAG 2 cut(s) 411, 1265
BfuI GTATCC 1 cut(s) 508
BisI GCNGC 4 cut(s) 122, 164, 541, 1254
BlsI GCNGC 4 cut(s) 123, 165, 542, 1255
BmcAI AGTACT 1 cut(s) 549
BmeRI GACNNNNNGTC 1 cut(s) 1972
BmeT110I CYCGRG 1 cut(s) 1668
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 2 cut(s) 1049, 1748
BmsI GCATC 5 cut(s) 436, 472, 1523, 1548, 1756
BpiI GAAGAC 4 cut(s) 87, 312, 1398, 1419
BpmI CTGGAG 1 cut(s) 615
Bpu10I CCTNAGC 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 1919
BsaI GGTCTC 2 cut(s) 1190, 1671
BsaJI CCNNGG 3 cut(s) 714, 1750, 1784
BsaXI ACNNNNNCTCC 2 cut(s) 1738, 1768
Bsc4I CCNNNNNNNGG 2 cut(s) 367, 1495
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 1 cut(s) 598
Bse3DI GCAATG 1 cut(s) 1979
BseDI CCNNGG 3 cut(s) 714, 1750, 1784
BseLI CCNNNNNNNGG 2 cut(s) 367, 1495
BseMI GCAATG 1 cut(s) 1979
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 1 cut(s) 598
BseRI GAGGAG 4 cut(s) 27, 866, 1060, 1691
BseSI GKGCMC 1 cut(s) 1219
BseXI GCAGC 4 cut(s) 108, 175, 552, 1265
BseYI CCCAGC 2 cut(s) 477, 968
BsgI GTGCAG 2 cut(s) 559, 1722
BshFI GGCC 2 cut(s) 5, 1583
BsiHKAI GWGCWC 1 cut(s) 1878
BsiHKCI CYCGRG 1 cut(s) 1668
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 2 cut(s) 190, 1131
BslI CCNNNNNNNGG 2 cut(s) 367, 1495
BsmAI GTCTC 6 cut(s) 200, 741, 848, 1190, 1278, 1671
BsmBI CGTCTC 1 cut(s) 741
BsmFI GGGAC 2 cut(s) 190, 1131
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 2 cut(s) 5, 1583
Bso31I GGTCTC 2 cut(s) 1190, 1671
BsoBI CYCGRG 1 cut(s) 1668
Bsp1286I GDGCHC 2 cut(s) 1219, 1878
Bsp143I GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
Bsp19I CCATGG 3 cut(s) 714, 1750, 1784
BspACI CCGC 2 cut(s) 88, 1405
BspANI GGCC 2 cut(s) 5, 1583
BspCNI CTCAG 1 cut(s) 32
BspHI TCATGA 2 cut(s) 1041, 1129
BspLI GGNNCC 2 cut(s) 1049, 1748
BspPI GGATC 4 cut(s) 338, 761, 1439, 1841
BspQI GCTCTTC 1 cut(s) 862
BspTNI GGTCTC 2 cut(s) 1190, 1671
BsrDI GCAATG 1 cut(s) 1979
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 1 cut(s) 598
BssAI RCCGGY 1 cut(s) 28
BssECI CCNNGG 3 cut(s) 714, 1750, 1784
BssMI GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
BssT1I CCWWGG 3 cut(s) 714, 1750, 1784
Bst4CI ACNGT 5 cut(s) 408, 673, 1207, 1535, 1880
Bst6I CTCTTC 2 cut(s) 862, 1647
BstC8I GCNNGC 2 cut(s) 1791, 1874
BstDEI CTNAG 3 cut(s) 11, 19, 983
BstDSI CCRYGG 3 cut(s) 714, 1750, 1784
BstKTI GATC 8 cut(s) 160, 346, 756, 763, 804, 1351, 1434, 1849
BstMAI GTCTC 6 cut(s) 200, 741, 848, 1190, 1278, 1671
BstMBI GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
BstMWI GCNNNNNNNGC 3 cut(s) 29, 614, 1687
BstNSI RCATGY 1 cut(s) 934
BstSLI GKGCMC 1 cut(s) 1219
BstV1I GCAGC 4 cut(s) 108, 175, 552, 1265
BstV2I GAAGAC 4 cut(s) 87, 312, 1398, 1419
BstX2I RGATCY 1 cut(s) 753
BstXI CCANNNNNNTGG 1 cut(s) 1757
BstYI RGATCY 1 cut(s) 753
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 2 cut(s) 5, 1583
BtgI CCRYGG 3 cut(s) 714, 1750, 1784
BtgZI GCGATG 1 cut(s) 1696
BtsI GCAGTG 2 cut(s) 443, 1217
BtsIMutI CAGTG 4 cut(s) 443, 669, 1217, 1540
Cac8I GCNNGC 2 cut(s) 1791, 1874
CciI TCATGA 2 cut(s) 1041, 1129
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 3 cut(s) 356, 548, 1504
CviQI GTAC 3 cut(s) 356, 548, 1504
DdeI CTNAG 3 cut(s) 11, 19, 983
DpnI GATC 8 cut(s) 159, 345, 755, 762, 803, 1350, 1433, 1848
DpnII GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
DraI TTTAAA 1 cut(s) 453
DriI GACNNNNNGTC 1 cut(s) 1972
EaeI YGGCCR 1 cut(s) 1581
Eam1104I CTCTTC 2 cut(s) 862, 1647
Eam1105I GACNNNNNGTC 1 cut(s) 1972
EarI CTCTTC 2 cut(s) 862, 1647
Eco130I CCWWGG 3 cut(s) 714, 1750, 1784
Eco31I GGTCTC 2 cut(s) 1190, 1671
Eco88I CYCGRG 1 cut(s) 1668
EcoRI GAATTC 3 cut(s) 318, 963, 1900
EcoT14I CCWWGG 3 cut(s) 714, 1750, 1784
EcoT22I ATGCAT 3 cut(s) 302, 591, 1563
ErhI CCWWGG 3 cut(s) 714, 1750, 1784
Esp3I CGTCTC 1 cut(s) 741
FalI AAGNNNNNCTT 4 cut(s) 1349, 1381, 1404, 1436
FaqI GGGAC 2 cut(s) 190, 1131
FauI CCCGC 1 cut(s) 95
FauNDI CATATG 1 cut(s) 724
FbaI TGATCA 2 cut(s) 157, 801
Fnu4HI GCNGC 4 cut(s) 122, 164, 541, 1254
Fsp4HI GCNGC 4 cut(s) 122, 164, 541, 1254
FspBI CTAG 2 cut(s) 411, 1265
GluI GCNGC 4 cut(s) 122, 164, 541, 1254
GsaI CCCAGC 2 cut(s) 481, 972
GsuI CTGGAG 1 cut(s) 615
HaeIII GGCC 2 cut(s) 5, 1583
HapII CCGG 1 cut(s) 29
HincII GTYRAC 1 cut(s) 1977
HindII GTYRAC 1 cut(s) 1977
HinfI GANTC 6 cut(s) 215, 910, 1088, 1133, 1454, 1727
HpaII CCGG 1 cut(s) 29
HphI GGTGA 3 cut(s) 89, 1003, 1636
Hpy166II GTNNAC 4 cut(s) 734, 1637, 1966, 1977
Hpy188I TCNGA 5 cut(s) 352, 502, 787, 1603, 1651
Hpy188III TCNNGA 9 cut(s) 561, 1042, 1130, 1451, 1574, 1668, 1808, 1816, 1936
Hpy8I GTNNAC 4 cut(s) 734, 1637, 1966, 1977
Hpy99I CGWCG 2 cut(s) 45, 1263
HpyAV CCTTC 4 cut(s) 397, 877, 1156, 1911
HpyCH4III ACNGT 5 cut(s) 408, 673, 1207, 1535, 1880
HpyCH4IV ACGT 1 cut(s) 339
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 614, 1687
HpyF3I CTNAG 3 cut(s) 11, 19, 983
HpySE526I ACGT 1 cut(s) 339
Ksp22I TGATCA 2 cut(s) 157, 801
Kzo9I GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
LguI GCTCTTC 1 cut(s) 862
LmnI GCTCC 5 cut(s) 1047, 1095, 1678, 1687, 1746
Lsp1109I GCAGC 4 cut(s) 108, 175, 552, 1265
LweI GCATC 5 cut(s) 436, 472, 1523, 1548, 1756
MaeI CTAG 2 cut(s) 411, 1265
MaeII ACGT 1 cut(s) 339
MaeIII GTNAC 3 cut(s) 526, 718, 1910
MalI GATC 8 cut(s) 159, 345, 755, 762, 803, 1350, 1433, 1848
MboI GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
MfeI CAATTG 2 cut(s) 842, 1191
MflI RGATCY 1 cut(s) 753
MhlI GDGCHC 2 cut(s) 1219, 1878
MlsI TGGCCA 1 cut(s) 1583
MluNI TGGCCA 1 cut(s) 1583
MmeI TCCRAC 3 cut(s) 1482, 1694, 1861
Mox20I TGGCCA 1 cut(s) 1583
Mph1103I ATGCAT 3 cut(s) 302, 591, 1563
MscI TGGCCA 1 cut(s) 1583
MseI TTAA 7 cut(s) 65, 141, 452, 654, 1068, 1422, 1509
MslI CAYNNNNRTG 1 cut(s) 535
Msp20I TGGCCA 1 cut(s) 1583
MspA1I CMGCKG 1 cut(s) 23
MspI CCGG 1 cut(s) 29
MunI CAATTG 2 cut(s) 842, 1191
Mva1269I GAATGC 1 cut(s) 843
MwoI GCNNNNNNNGC 3 cut(s) 29, 614, 1687
NcoI CCATGG 3 cut(s) 714, 1750, 1784
NdeI CATATG 1 cut(s) 724
NdeII GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
NlaIV GGNNCC 2 cut(s) 1049, 1748
NmuCI GTSAC 2 cut(s) 526, 1910
NsiI ATGCAT 3 cut(s) 302, 591, 1563
NspI RCATGY 1 cut(s) 934
PaeR7I CTCGAG 1 cut(s) 1668
PagI TCATGA 2 cut(s) 1041, 1129
PciI ACATGT 1 cut(s) 930
PciSI GCTCTTC 1 cut(s) 862
PcsI WCGNNNNNNNCGW 1 cut(s) 756
PctI GAATGC 1 cut(s) 843
PfeI GAWTC 6 cut(s) 215, 910, 1088, 1133, 1454, 1727
PflFI GACNNNGTC 1 cut(s) 428
PflMI CCANNNNNTGG 1 cut(s) 1495
PkrI GCNGC 4 cut(s) 123, 165, 542, 1255
PscI ACATGT 1 cut(s) 930
PsiI TTATAA 2 cut(s) 917, 1884
PspFI CCCAGC 2 cut(s) 477, 968
PspN4I GGNNCC 2 cut(s) 1049, 1748
PspPI GGNCC 1 cut(s) 4
PsuI RGATCY 1 cut(s) 753
PsyI GACNNNGTC 1 cut(s) 428
PvuII CAGCTG 1 cut(s) 23
RsaI GTAC 3 cut(s) 357, 549, 1505
RsaNI GTAC 3 cut(s) 356, 548, 1504
RseI CAYNNNNRTG 1 cut(s) 535
SapI GCTCTTC 1 cut(s) 862
SaqAI TTAA 7 cut(s) 65, 141, 452, 654, 1068, 1422, 1509
SatI GCNGC 4 cut(s) 122, 164, 541, 1254
Sau3AI GATC 8 cut(s) 157, 343, 753, 760, 801, 1348, 1431, 1846
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 549
SduI GDGCHC 2 cut(s) 1219, 1878
SfaNI GCATC 5 cut(s) 436, 472, 1523, 1548, 1756
Sfr274I CTCGAG 1 cut(s) 1668
SlaI CTCGAG 1 cut(s) 1668
SmiMI CAYNNNNRTG 1 cut(s) 535
SmlI CTYRAG 2 cut(s) 1668, 1934
SmoI CTYRAG 2 cut(s) 1668, 1934
SsiI CCGC 2 cut(s) 88, 1405
SspMI CTAG 2 cut(s) 411, 1265
StyI CCWWGG 3 cut(s) 714, 1750, 1784
TaaI ACNGT 5 cut(s) 408, 673, 1207, 1535, 1880
TaiI ACGT 1 cut(s) 342
TaqI TCGA 5 cut(s) 576, 759, 1258, 1450, 1669
TaqII GACCGA 1 cut(s) 1929
TatI WGTACW 1 cut(s) 547
TfiI GAWTC 6 cut(s) 215, 910, 1088, 1133, 1454, 1727
Tru1I TTAA 7 cut(s) 65, 141, 452, 654, 1068, 1422, 1509
Tru9I TTAA 7 cut(s) 65, 141, 452, 654, 1068, 1422, 1509
TscAI CASTG 4 cut(s) 443, 676, 1224, 1540
TseFI GTSAC 2 cut(s) 526, 1910
TseI GCWGC 4 cut(s) 121, 163, 540, 1253
Tsp45I GTSAC 2 cut(s) 526, 1910
TspDTI ATGAA 8 cut(s) 291, 414, 1118, 1146, 1254, 1481, 1485, 1845
TspGWI ACGGA 1 cut(s) 702
TspRI CASTG 4 cut(s) 443, 676, 1224, 1540
Tth111I GACNNNGTC 1 cut(s) 428
Van91I CCANNNNNTGG 1 cut(s) 1495
XapI RAATTY 6 cut(s) 318, 807, 946, 963, 1863, 1900
XceI RCATGY 1 cut(s) 934
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XhoI CTCGAG 1 cut(s) 1668
XspI CTAG 2 cut(s) 411, 1265
ZrmI AGTACT 1 cut(s) 549
Zsp2I ATGCAT 3 cut(s) 302, 591, 1563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.