Rmu_sc0000595.1_g000002

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000595.1
OG0000085
Physical Location & Seq
Reverse (-)
8329 .. 12778
4450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000595.1_g000002.1.cds

Sequence Viewer

Length: 4248 bp
atggccatggcgattattgcggtaattgtgacatggattggtgtcatagctactgttaagtggatatggactctagtgaagcatcggttgggttacatggttgaaaagcatgagccaacatcgcaggataatcaagagttcgtcaacatcgatgcctccagacctcttccttcaccatcagctgaatcatcagcagctcgtcaatggaattatgaggtgttcttgagtttcaggggtcctgacactcgcaagggtattacatttgaattatatgatcgactgcacaggaggggaattaaaacattcatggatgaccaagatcttcaagtaggggatactatttctcccactctactaaaagcaattgaagaatcaaggttggcaattgttgttctgtccgaaaagtatgcttcttctacttggtgtttggaggaacttacaaagatctgtgagtgcatgaaagacgacaacagaattcttccacttttttataatgtcgagcctactgatgtaagatatcagaagagaagtttcgaagaagctttcaccaaatatgaaaagtctgggcgacatagatcggagaaggtccaacaatggagagatgctttaaacaaagtggctcatttctctggttgggattcaaagaaatacaagactgaaagagaactcatcgaagacattgtggaatatgtctgtagtaaagtacaacctattgcaatcaacatgggagattttgaagaatttgaagcaacaagacaagccatgaatatggttatgaaagggctagaagatgacgaggtcactgccattggagtctacggaatgggaggcgtcggcaagacaaccatggtaaaacatatcagtgatcaagctcgaaaaaatggaaactttcgtcatgtaattatggctactatatcacaaagccctgacttgaggaaaattcaaggccaattggcagatctgttgggcttcgaattcatggaggagactgaaattggaagagcagctagattgagtaaggagataatgagaagaaataagatcctcataatccttgatgacatttgggagaggatggatatatcaagaataggaatacctagctatgaggaacttcaaaagtgtaattccaaagtcctactcaccacaaggatatggaatgtctgtcatgtcatgagatgccaagaaaagatcaccctcaatatcctatcaaaagaggattcttggacattgtttgtgagaaatgcaggaaggtcttttgaatccaccaattttgagaatgtagcgtcgcaggataatcaagagttcgtcaacatcgatgcctccagacctcttccttcaccatcagctgaatcatcagcagctcgtcgatggaattatgatgtgttcttgagtttcaggggtcctgacactcgcaagggtattacatttgaattatatgatcgactacacaggaggggaattaaaacattcatggatgaccaagatcttcaagtaggggatactatttctcccactctactaaaagcaattgaagaatcaaggttggcaattgttgttctgtccgaaaagtatgcttcttctacttggtgtttggaggaacttacaaagatctgtgagtgcatgaaagacgacaacagaattcttccacttttttataatgtcgagcctactgatgtaagatatcagaagagaagtttcgaagaagctttcaccaaatatgaaaattctgggcgacatagatcggagaaggtccaacaatggagagatgctttaaacaaagtggctcatttctctggttgggattcaaagaaatacaagactgaaagagaactcatcgaagacattgtggaatatgtctgtagtaaagtacaacctattgcaatcaacatgggagattttgaagaatttgaagcaacaagacaagccatgaatatggttatgaaagggctagaagatgacgaggtcactgccattggagtctacggaatgggaggcgtcggcaagacaaccatggtaaaacatatcagtgatcaagctcgaaaaaatggaaactttcgtcatgtaattatggctactatatcacaaagccctgacttgaggaaaattcaaggccaattggcagatctgttgggcttcgaattcatggaggagactgaaattggaagagcagctagattgagtaaggagataatgagaagaaataagatcctcataatccttgatgacatttgggagaggatggatatatcaagaataggaatacctagctatgaggaacttcaaaagtgtaattccaaagtcctactcaccacaaggatatggaatgtctgtcatgtcatgagatgccaagaaaagatcatcctcaatatcctatcaaaagaggattcttggacattgtttgtgagaaatgcaggaaggtcttttgaatccaccaattttgagaatgtagcgaggaaggtagctggagaatgtaggggtctaccgattgcattgatagcagttgcaagggcactcggcgataaagaattggtggaatgggaaagagcagctcaacgactagagaagtcacaaactgccaaccctgacgataaaggagatgcatctgaatgtataagattaagttatgattacttgaaagatgaggattacaagtcatgcttcttgctctgttgcttatttccagaagactatgacatccaaatagaaaacttattcaactatgtgatagggaaaggactgtttagagatgctgagaccatcgaagaagccagaggaacagcaaatttggtggttgcgcacctgaaaaattgttgcttgcttttggatagtgatgaagatggatgtgtaagaatgcatgatgtcatccgggatacagccatgataattgcaaaatctaaagacgggcatgggtttttggtaaaagctgggtctggtttaaagcattggtcatgtcgattacatgaagactactctgcaatttcactaatgaagaacaaaattcgcaagctacctgaagagttggtatgtccaaaactccagattttattactacaagagaatgctgatttaacagagattccagaaaaatttctccaaagtgcaaatgaactaagggtcttagatcttggcctcactagtgttttatcactaccccaatcattgagtctcctatcaaacctccaagctttgtatttagatttttgcaagaaaagagttgacatttccataattggaaaacttactaagcttgagattcttagtatgagaggttatcctgttaaggaattgtcaagagaattgtggagagaagtaggaaaattgactaatctaaggatgttggatgtcggtggtgttagtgtggtgggtggaggtactgtcacaattccctctaaagtgatatcaaagttgcatagattagaagaactgtacatgctgtactgtggatttgaggactggggaagtcgggttgagggagaaggagaagaaacatatattatctttgatgagttaactggtttatcaaatttgaaaattgtgcagctttgcatatctgatgcaaaatgcatcccaaaagaagttgaggtcgaaccaaattgggtttactttgatatacgtatcgatggctggtcaagcaatccatacaagcgaaatgttcctaactcaagatcctcgtctctcaacacaaccatcagtagcttaccagactggtttgtcaatgtggtgacaaggaaatcagagaagctactgtatgaagaagactgcaaaggtttaagtaacattcttatggaatatgaccatgggaggttacatggactgaagcatctctctgtaattggtcccaataagagcttgaaagagttgatgaacacaacaacacggattaaacaagaacctgtgtttgagaacttggaagagttgcatctgagtcgcctggactgcatgaaggagttgtgtgttggtgacttaccacctggttctctattcaatgtgaagttattgaggatccgcgattgtcttaacttggggaatgtactgttgccttcaaaattgttgcagagactgccaaatctggaaatagtatttctttacagaatacgtaaattggaatatgtgtttggatgtgaagggtttgagccagaacattcaaaattgagagaggtgacattgttgtggctagatgcagtaagaagcatatgtaatggtccggttccccgtgctatgttccggactcttaggagaatttag

Protein Analysis

1415

Amino Acids

162.42

Weight (kDa)

6.1

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 492, 1659
AasI GACNNNNNNGTC 1 cut(s) 3713
Acc16I TGCGCA 1 cut(s) 2799
AccI GTMKAC 3 cut(s) 816, 1983, 2482
AccII CGCG 1 cut(s) 4011
AccIII TCCGGA 1 cut(s) 4227
AciI CCGC 2 cut(s) 20, 4009
AclWI GGATC 5 cut(s) 1036, 2203, 3663, 4000, 4013
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 2 cut(s) 3036, 3839
AcyI GRCGYC 2 cut(s) 831, 1998
AfaI GTAC 6 cut(s) 705, 1872, 3376, 3431, 3440, 4035
AhlI ACTAGT 1 cut(s) 3137
AjnI CCWGG 2 cut(s) 3933, 3973
AjuI GAANNNNNNNTTGG 4 cut(s) 71, 103, 4101, 4133
Alw26I GTCTC 6 cut(s) 980, 2147, 2750, 3173, 3681, 4054
AlwI GGATC 5 cut(s) 1036, 2203, 3663, 4000, 4013
AlwNI CAGNNNCTG 1 cut(s) 4063
Aor13HI TCCGGA 1 cut(s) 4227
AoxI GGCC 4 cut(s) 3, 946, 2113, 3130
ApeKI GCWGC 6 cut(s) 194, 1004, 1361, 2171, 2549, 3541
Asp700I GAANNNNTTC 1 cut(s) 3090
AspLEI GCGC 1 cut(s) 2800
AspS9I GGNCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
AsuC2I CCSGG 1 cut(s) 2870
AsuII TTCGAA 4 cut(s) 534, 972, 1701, 2139
AvaII GGWCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
BaeGI GKGCMC 1 cut(s) 2515
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 4005
BbsI GAAGAC 5 cut(s) 681, 1848, 2694, 2973, 3765
BbvI GCAGC 6 cut(s) 206, 1016, 1373, 2183, 2561, 3553
BccI CCATC 9 cut(s) 184, 1069, 1351, 1365, 2236, 2768, 2834, 3617, 3698
BciT130I CCWGG 2 cut(s) 3935, 3975
BciVI GTATCC 3 cut(s) 328, 1495, 2866
BclI TGATCA 2 cut(s) 865, 2032
BcnI CCSGG 1 cut(s) 2870
BcoDI GTCTC 6 cut(s) 980, 2147, 2750, 3173, 3681, 4054
BcuI ACTAGT 1 cut(s) 3137
BfmI CTRYAG 2 cut(s) 694, 1861
BfuI GTATCC 3 cut(s) 328, 1495, 2866
BglII AGATCT 7 cut(s) 319, 444, 958, 1486, 1611, 2125, 3124
BisI GCNGC 6 cut(s) 195, 1005, 1362, 2172, 2550, 3542
BlsI GCNGC 6 cut(s) 196, 1006, 1363, 2173, 2551, 3543
Bme1390I CCNGG 3 cut(s) 2870, 3935, 3975
Bme18I GGWCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
BmgT120I GGNCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
BmiI GGNNCC 5 cut(s) 237, 1404, 3841, 4007, 4212
BmrFI CCNGG 3 cut(s) 2870, 3935, 3975
BmrI ACTGGG 1 cut(s) 3466
BmuI ACTGGG 1 cut(s) 3466
BpiI GAAGAC 5 cut(s) 681, 1848, 2694, 2973, 3765
BpmI CTGGAG 4 cut(s) 142, 1309, 2487, 3023
Bpu14I TTCGAA 4 cut(s) 534, 972, 1701, 2139
BpuEI CTTGAG 6 cut(s) 244, 952, 1411, 2119, 3272, 3649
BpuMI CCSGG 1 cut(s) 2870
Bsa29I ATCGAT 3 cut(s) 150, 1317, 3621
BsaAI YACGTR 2 cut(s) 3617, 4100
BsaHI GRCGYC 2 cut(s) 831, 1998
BsaI GGTCTC 1 cut(s) 2750
BsaJI CCNNGG 4 cut(s) 6, 846, 2013, 3799
BsaWI WCCGGW 2 cut(s) 4207, 4227
BsaXI ACNNNNNCTCC 6 cut(s) 328, 358, 1495, 1525, 3363, 3393
Bse1I ACTGG 3 cut(s) 3461, 3520, 3713
BseAI TCCGGA 1 cut(s) 4227
BseBI CCWGG 2 cut(s) 3935, 3975
BseCI ATCGAT 3 cut(s) 150, 1317, 3621
BseDI CCNNGG 4 cut(s) 6, 846, 2013, 3799
BseMII CTCAG 2 cut(s) 2745, 3917
BseNI ACTGG 3 cut(s) 3461, 3520, 3713
BseRI GAGGAG 2 cut(s) 998, 2165
BseSI GKGCMC 1 cut(s) 2515
BseXI GCAGC 6 cut(s) 206, 1016, 1373, 2183, 2561, 3553
BseYI CCCAGC 1 cut(s) 2927
BsgI GTGCAG 2 cut(s) 266, 3560
Bsh1236I CGCG 1 cut(s) 4011
BshFI GGCC 4 cut(s) 5, 948, 2115, 3132
BshVI ATCGAT 3 cut(s) 150, 1317, 3621
BsiSI CCGG 3 cut(s) 2869, 4208, 4228
BslFI GGGAC 1 cut(s) 3825
BsmAI GTCTC 6 cut(s) 980, 2147, 2750, 3173, 3681, 4054
BsmBI CGTCTC 1 cut(s) 3681
BsmFI GGGAC 1 cut(s) 3825
BsmI GAATGC 2 cut(s) 2859, 3067
BsnI GGCC 4 cut(s) 5, 948, 2115, 3132
Bso31I GGTCTC 1 cut(s) 2750
Bsp119I TTCGAA 4 cut(s) 534, 972, 1701, 2139
Bsp1286I GDGCHC 1 cut(s) 2515
Bsp13I TCCGGA 1 cut(s) 4227
Bsp1407I TGTACA 1 cut(s) 3429
Bsp19I CCATGG 4 cut(s) 6, 846, 2013, 3799
BspACI CCGC 2 cut(s) 20, 4009
BspANI GGCC 4 cut(s) 5, 948, 2115, 3132
BspCNI CTCAG 2 cut(s) 2746, 3918
BspDI ATCGAT 3 cut(s) 150, 1317, 3621
BspEI TCCGGA 1 cut(s) 4227
BspFNI CGCG 1 cut(s) 4011
BspHI TCATGA 2 cut(s) 1173, 2340
BspLI GGNNCC 5 cut(s) 237, 1404, 3841, 4007, 4212
BspPI GGATC 5 cut(s) 1036, 2203, 3663, 4000, 4013
BspQI GCTCTTC 2 cut(s) 994, 2161
BspT104I TTCGAA 4 cut(s) 534, 972, 1701, 2139
BspTNI GGTCTC 1 cut(s) 2750
BsrGI TGTACA 1 cut(s) 3429
BsrI ACTGG 3 cut(s) 3461, 3520, 3713
BssECI CCNNGG 4 cut(s) 6, 846, 2013, 3799
BssNI GRCGYC 2 cut(s) 831, 1998
BssT1I CCWWGG 4 cut(s) 6, 846, 2013, 3799
Bst2UI CCWGG 2 cut(s) 3935, 3975
Bst4CI ACNGT 7 cut(s) 55, 2742, 3379, 3429, 3443, 3750, 4038
Bst6I CTCTTC 8 cut(s) 171, 518, 994, 1338, 1685, 2161, 3012, 3909
BstACI GRCGYC 2 cut(s) 831, 1998
BstAPI GCANNNNNTGC 1 cut(s) 4063
BstAUI TGTACA 1 cut(s) 3429
BstBAI YACGTR 2 cut(s) 3617, 4100
BstBI TTCGAA 4 cut(s) 534, 972, 1701, 2139
BstC8I GCNNGC 2 cut(s) 2819, 3008
BstDEI CTNAG 8 cut(s) 2754, 3113, 3121, 3246, 3260, 3332, 3926, 4235
BstDSI CCRYGG 4 cut(s) 6, 846, 2013, 3799
BstFNI CGCG 1 cut(s) 4011
BstHHI GCGC 1 cut(s) 2800
BstMAI GTCTC 6 cut(s) 980, 2147, 2750, 3173, 3681, 4054
BstMWI GCNNNNNNNGC 6 cut(s) 17, 121, 2498, 3633, 3939, 4063
BstNI CCWGG 2 cut(s) 3935, 3975
BstNSI RCATGY 1 cut(s) 3436
BstSCI CCNGG 3 cut(s) 2868, 3933, 3973
BstSFI CTRYAG 2 cut(s) 694, 1861
BstSLI GKGCMC 1 cut(s) 2515
BstSNI TACGTA 2 cut(s) 3617, 4100
BstUI CGCG 1 cut(s) 4011
BstV1I GCAGC 6 cut(s) 206, 1016, 1373, 2183, 2561, 3553
BstV2I GAAGAC 5 cut(s) 681, 1848, 2694, 2973, 3765
BstXI CCANNNNNNTGG 2 cut(s) 769, 1936
Bsu15I ATCGAT 3 cut(s) 150, 1317, 3621
BsuI GTATCC 3 cut(s) 328, 1495, 2866
BsuRI GGCC 4 cut(s) 5, 948, 2115, 3132
BsuTUI ATCGAT 3 cut(s) 150, 1317, 3621
BtgI CCRYGG 4 cut(s) 6, 846, 2013, 3799
BtgZI GCGATG 1 cut(s) 105
BtsI GCAGTG 2 cut(s) 801, 1968
BtsIMutI CAGTG 4 cut(s) 801, 868, 1968, 2035
Cac8I GCNNGC 2 cut(s) 2819, 3008
CaiI CAGNNNCTG 1 cut(s) 4063
CciI TCATGA 2 cut(s) 1173, 2340
CfoI GCGC 1 cut(s) 2800
Cfr13I GGNCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
ClaI ATCGAT 3 cut(s) 150, 1317, 3621
CseI GACGC 3 cut(s) 820, 1275, 1987
CsiI ACCWGGT 1 cut(s) 3973
Csp6I GTAC 6 cut(s) 704, 1871, 3375, 3430, 3439, 4034
CspCI CAANNNNNGTGG 6 cut(s) 1255, 1290, 2422, 2457, 2772, 2807
CviQI GTAC 6 cut(s) 704, 1871, 3375, 3430, 3439, 4034
DdeI CTNAG 8 cut(s) 2754, 3113, 3121, 3246, 3260, 3332, 3926, 4235
DraI TTTAAA 3 cut(s) 609, 1776, 2940
DrdI GACNNNNNNGTC 1 cut(s) 3713
DseDI GACNNNNNNGTC 1 cut(s) 3713
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 8 cut(s) 171, 518, 994, 1338, 1685, 2161, 3012, 3909
EarI CTCTTC 8 cut(s) 171, 518, 994, 1338, 1685, 2161, 3012, 3909
Eco105I TACGTA 2 cut(s) 3617, 4100
Eco130I CCWWGG 4 cut(s) 6, 846, 2013, 3799
Eco31I GGTCTC 1 cut(s) 2750
Eco32I GATATC 3 cut(s) 518, 1685, 3402
Eco47I GGWCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
Eco57I CTGAAG 2 cut(s) 3036, 3839
EcoO109I RGGNCCY 2 cut(s) 236, 1403
EcoRI GAATTC 4 cut(s) 474, 974, 1641, 2141
EcoRII CCWGG 2 cut(s) 3933, 3973
EcoRV GATATC 3 cut(s) 518, 1685, 3402
EcoT14I CCWWGG 4 cut(s) 6, 846, 2013, 3799
EcoT22I ATGCAT 3 cut(s) 2605, 2859, 3569
ErhI CCWWGG 4 cut(s) 6, 846, 2013, 3799
Esp3I CGTCTC 1 cut(s) 3681
FalI AAGNNNNNCTT 2 cut(s) 2645, 2677
FaqI GGGAC 1 cut(s) 3825
FauNDI CATATG 1 cut(s) 4196
FbaI TGATCA 2 cut(s) 865, 2032
FblI GTMKAC 3 cut(s) 816, 1983, 2482
Fnu4HI GCNGC 6 cut(s) 195, 1005, 1362, 2172, 2550, 3542
Fsp4HI GCNGC 6 cut(s) 195, 1005, 1362, 2172, 2550, 3542
FspI TGCGCA 1 cut(s) 2799
GlaI GCGC 1 cut(s) 2799
GluI GCNGC 6 cut(s) 195, 1005, 1362, 2172, 2550, 3542
GsaI CCCAGC 1 cut(s) 2931
GsuI CTGGAG 4 cut(s) 142, 1309, 2487, 3023
HaeIII GGCC 4 cut(s) 5, 948, 2115, 3132
HapII CCGG 3 cut(s) 2869, 4208, 4228
HgaI GACGC 3 cut(s) 820, 1275, 1987
HhaI GCGC 1 cut(s) 2800
Hin1I GRCGYC 2 cut(s) 831, 1998
Hin6I GCGC 1 cut(s) 2798
HinP1I GCGC 1 cut(s) 2798
HincII GTYRAC 4 cut(s) 145, 1312, 3220, 3513
HindII GTYRAC 4 cut(s) 145, 1312, 3220, 3513
HindIII AAGCTT 4 cut(s) 540, 1707, 3186, 3248
HpaI GTTAAC 1 cut(s) 3513
HpaII CCGG 3 cut(s) 2869, 4208, 4228
Hpy166II GTNNAC 8 cut(s) 145, 817, 1312, 1984, 2483, 3220, 3513, 3604
Hpy8I GTNNAC 8 cut(s) 145, 817, 1312, 1984, 2483, 3220, 3513, 3604
Hpy99I CGWCG 4 cut(s) 836, 1291, 1371, 2003
HpyCH4III ACNGT 7 cut(s) 55, 2742, 3379, 3429, 3443, 3750, 4038
HpyCH4IV ACGT 2 cut(s) 3616, 4099
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 121, 2498, 3633, 3939, 4063
HpyF3I CTNAG 8 cut(s) 2754, 3113, 3121, 3246, 3260, 3332, 3926, 4235
HpySE526I ACGT 2 cut(s) 3616, 4099
Hsp92I GRCGYC 2 cut(s) 831, 1998
HspAI GCGC 1 cut(s) 2798
Kpn2I TCCGGA 1 cut(s) 4227
Ksp22I TGATCA 2 cut(s) 865, 2032
KspAI GTTAAC 1 cut(s) 3513
LguI GCTCTTC 2 cut(s) 994, 2161
Lsp1109I GCAGC 6 cut(s) 206, 1016, 1373, 2183, 2561, 3553
MabI ACCWGGT 1 cut(s) 3973
MaeII ACGT 2 cut(s) 3616, 4099
MfeI CAATTG 6 cut(s) 363, 384, 950, 1530, 1551, 2117
MhlI GDGCHC 1 cut(s) 2515
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 6 cut(s) 64, 822, 1989, 3175, 3937, 4225
MmeI TCCRAC 3 cut(s) 613, 1780, 3321
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 3 cut(s) 2605, 2859, 3569
MroI TCCGGA 1 cut(s) 4227
MroXI GAANNNNTTC 1 cut(s) 3090
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 7 cut(s) 767, 861, 1934, 2028, 2608, 3785, 4171
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 182, 1349
MspI CCGG 3 cut(s) 2869, 4208, 4228
MspR9I CCNGG 3 cut(s) 2870, 3935, 3975
MunI CAATTG 6 cut(s) 363, 384, 950, 1530, 1551, 2117
Mva1269I GAATGC 2 cut(s) 2859, 3067
MvaI CCWGG 2 cut(s) 3935, 3975
MvnI CGCG 1 cut(s) 4011
MwoI GCNNNNNNNGC 6 cut(s) 17, 121, 2498, 3633, 3939, 4063
NciI CCSGG 1 cut(s) 2870
NcoI CCATGG 4 cut(s) 6, 846, 2013, 3799
NdeI CATATG 1 cut(s) 4196
NlaIV GGNNCC 5 cut(s) 237, 1404, 3841, 4007, 4212
NmeAIII GCCGAG 1 cut(s) 2496
NmuCI GTSAC 8 cut(s) 28, 799, 1966, 2568, 3379, 3724, 3962, 4162
NsbI TGCGCA 1 cut(s) 2799
NsiI ATGCAT 3 cut(s) 2605, 2859, 3569
NspI RCATGY 1 cut(s) 3436
NspV TTCGAA 4 cut(s) 534, 972, 1701, 2139
PagI TCATGA 2 cut(s) 1173, 2340
PciSI GCTCTTC 2 cut(s) 994, 2161
PcsI WCGNNNNNNNCGW 2 cut(s) 147, 1314
PctI GAATGC 2 cut(s) 2859, 3067
PdmI GAANNNNTTC 1 cut(s) 3090
PflFI GACNNNGTC 2 cut(s) 797, 1964
PfoI TCCNGGA 1 cut(s) 2868
PkrI GCNGC 6 cut(s) 196, 1006, 1363, 2173, 2551, 3543
PleI GAGTC 6 cut(s) 64, 821, 1988, 3174, 3936, 4225
PpsI GAGTC 6 cut(s) 64, 821, 1988, 3174, 3936, 4225
Ppu21I YACGTR 2 cut(s) 3617, 4100
PpuMI RGGWCCY 2 cut(s) 236, 1403
PsiI TTATAA 2 cut(s) 492, 1659
Psp5II RGGWCCY 2 cut(s) 236, 1403
Psp6I CCWGG 2 cut(s) 3933, 3973
PspFI CCCAGC 1 cut(s) 2927
PspGI CCWGG 2 cut(s) 3933, 3973
PspN4I GGNNCC 5 cut(s) 237, 1404, 3841, 4007, 4212
PspPI GGNCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
PspPPI RGGWCCY 2 cut(s) 236, 1403
PstNI CAGNNNCTG 1 cut(s) 4063
PsyI GACNNNGTC 2 cut(s) 797, 1964
PvuII CAGCTG 2 cut(s) 182, 1349
RsaI GTAC 6 cut(s) 705, 1872, 3376, 3431, 3440, 4035
RsaNI GTAC 6 cut(s) 704, 1871, 3375, 3430, 3439, 4034
RseI CAYNNNNRTG 7 cut(s) 767, 861, 1934, 2028, 2608, 3785, 4171
SapI GCTCTTC 2 cut(s) 994, 2161
SatI GCNGC 6 cut(s) 195, 1005, 1362, 2172, 2550, 3542
Sau96I GGNCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
SchI GAGTC 6 cut(s) 64, 822, 1989, 3175, 3937, 4225
ScrFI CCNGG 3 cut(s) 2870, 3935, 3975
SduI GDGCHC 1 cut(s) 2515
SexAI ACCWGGT 1 cut(s) 3973
SfcI CTRYAG 2 cut(s) 694, 1861
SfuI TTCGAA 4 cut(s) 534, 972, 1701, 2139
SinI GGWCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
SmiMI CAYNNNNRTG 7 cut(s) 767, 861, 1934, 2028, 2608, 3785, 4171
SmlI CTYRAG 6 cut(s) 223, 931, 1390, 2098, 3251, 3664
SmoI CTYRAG 6 cut(s) 223, 931, 1390, 2098, 3251, 3664
SnaBI TACGTA 2 cut(s) 3617, 4100
SpeI ACTAGT 1 cut(s) 3137
SsiI CCGC 2 cut(s) 20, 4009
StyD4I CCNGG 3 cut(s) 2868, 3933, 3973
StyI CCWWGG 4 cut(s) 6, 846, 2013, 3799
TaaI ACNGT 7 cut(s) 55, 2742, 3379, 3429, 3443, 3750, 4038
TaiI ACGT 2 cut(s) 3619, 4102
TatI WGTACW 5 cut(s) 703, 1870, 3429, 3438, 4033
TscAI CASTG 4 cut(s) 808, 868, 1975, 2035
TseFI GTSAC 8 cut(s) 28, 799, 1966, 2568, 3379, 3724, 3962, 4162
TseI GCWGC 6 cut(s) 194, 1004, 1361, 2171, 2549, 3541
Tsp45I GTSAC 8 cut(s) 28, 799, 1966, 2568, 3379, 3724, 3962, 4162
TspGWI ACGGA 3 cut(s) 834, 2001, 3895
TspRI CASTG 4 cut(s) 808, 868, 1975, 2035
Tth111I GACNNNGTC 2 cut(s) 797, 1964
VpaK11BI GGWCC 6 cut(s) 236, 586, 1403, 1753, 3839, 4205
XceI RCATGY 1 cut(s) 3436
XmiI GTMKAC 3 cut(s) 816, 1983, 2482
XmnI GAANNNNTTC 1 cut(s) 3090
Zsp2I ATGCAT 3 cut(s) 2605, 2859, 3569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.