Rmu_sc0002513.1_g000025

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002513.1
OG0000085
Physical Location & Seq
Reverse (-)
126212 .. 136622
10411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002513.1_g000025.1.cds

Sequence Viewer

Length: 6672 bp
atggattctcaggaactcaatactaaagtccgattagtcagatgtcctaaatgtcggctgcttctaccagagttgccggattttcaggtttacaagtgtggtggatgtggtgccattctccaagcaaaaaatcgagtaagaaatgagaaaagaagtgagggcttaaccattgaatcagctccagtgaatcaattattagatcatttttctcgagattcagaaatggtcagctcagatgtggccttgttctctcgaaaagctgatgcttctcttccttcatcagctgaactatcatcagcagctggtcggtggaagtatgatgtgtatttgagtttcaggggtgtagatactcgaaggggttttacatcccatttatacgatcggctgcagaggagtggaattaagacattcatggatgatcaagatcttcaagtaggggatgatgtttctcccactctcctaaaggcaattgaaggatcaaggttcgcaattgttgttctgtctcaaaattatgcttcttctgcttggtgtttggatgaacttacaaagatttgtcagttcatggaggacggccctagaattcttccagttttttatgaggttgaccctagtcatgtaagaaaacaaaaggggagttttgaggatgctttagccaagcatgaaaggtctgggcgatacgaatcgaaaaaggtccagcagtggagagatgctttaagaaaagtggccgactttgctgggtttgatacacagaattacaggactgatatagatcttctcgaacacattgtggaaattgtgtgcagtaaagtacaatctgttttggaaattgaaatagtacaacctattgaaatcaacacaggaggttttgaattatttgaaccaacaagaaaagccatggatgacattatggaggcgctaaaagatgacgaggtcactgccgttggtgtctacggcatggcaggcgttggaaagacagccatggtaaaacatgtcggtgcacatgcccgaaaaagtggaatttttcatcatgtgattatcggtgatgtatcccaaagccctgacttggaaacaattcaaggcacattggcagggcagctgggctacaaattacatgagaagacagaaattggcagagcagctagattgagtgaggagataaagagaaggggaaagatccttataatcctggacgacatttgggagagaatggatttgtcagacataggaatacctagctataaggagcttcaaaagtgcaattccaaagtcctactcaccacacggagagagaatgtgtgtcatgagatgagatgccaagcaattattcatctcaatatcttatcagaacaagattcttggtcattgtttgtgaaaacggcaagaatagactctgaatcgattgttttctatgatgtagcgagggaggtggttagtaaatgtgctggtctaccgattgcattgatagcagttgcaagggcacttggaggtaaagaactagtggaatggaaaagagcagctcgagcactagagaagtcgcaatctgccaatcctgaacatgaaggagaggcattcagatgtataaaattaagctatgattacttgaaagatgaagataccaagtcatgcttcttgctttgttgcctatttcctgaagactatgacatcccaataggagacttgttcaagtatgcaatcgggaaaggattgtttcgggatgccgagacaatccaagaagctagagcatcagctgattcagccgtaaggtacctgaaacattttagcttgcttttggatagtgagaaaaaggggtgtgtaaggatgcaggatgtcattcgggatgctgccctgaatattgcaaaatctgaagacgggcatgggtttttggtaaaagctggctgtggtttaaaaagctggccacatcaattacatgaaggctactctgcaatctcattaatgaacaatgatatccacaagctacccggagagctggtatgtccaaaactccagattttattactacagcagaatgctgatttaaatgagatgcctggaacttttttccaaagtcctaatgaattaagggtcttagaccttagcctcaccagcattacagaacttcctcaatcattcagtctcctaatgaacctccaagctttatatctagatttttgccagagactgattgacttttccttaattggaaaactaaagaagcttgagattcttagtatgagaggaaatgttttgaaagaattgtcgagagaaatagggaatctgatcaatctaaggatgctggacattactgatggaattattagcaaaattccatcaaaagtgatatcgcagttgcatagattagaagaactctacatgccatttcgatttgggaattgggtcagtaaggttgaaggagaaggagaagaaaccgatattggctttggtgaggtaactggcttaacatgtctaaatattttgaaggtttccctacctgcaaaatgcatccctgaagagcttgagttttatcccaattggttgttctttgatatttgtattagtggggacacaagcagcagagacattacgagagacataagtaatcaaggctttcaacacagtcataaagattcaagatccttgagtcttgacacaagaattagtgccttaccagcttggtttgtccatgaggtaacagtcaagacagagaagctactgtacgtaaactgcaaatggttaaataacattcttgttgaatatcaccatgggaggttacatatgctgaaacatctctctattattggtcccagtgagagcttggaagagctgatgaatgctataacatgggttccagttaaacccgtgttcgagaacttggaagagttgcatttggagtgtgtgacttctttgaaagagttatgtgttggaaaattaccacctgggtctctatacaatctgaagttattgaaggtccattattgtcctaacttggggaatattcttttaccatcaaaattgttacatagattgccaaatctggagaacataatctgtagggatatgtctagactggaacatgtgtttggatgtcaagggtttgagccagagcaatcaaaactgagagagatgacctttatcaatctacctgctataagaaacatatgtaacggtccagctccacgtgcaatgttccaagctcttaaaagtttgttcatttgtcattgcaactttctaggatgtctcttctcgtttgatactgctcaagttctttttcaattggaagacttttttgtagacagttgccctttattggaaagactaattgaagtacgcacggaaagagtgaacaacaagaagatcattcttccaaaattgaagaacttgggtttagagaaacttcctatattgtacagtggaggtgctactattgatatcgagtgtccttccttggaacacttgtatgtgaaggagtgcccccagtttacagcctctgcttctgacttccagagcaagaaccaagtccaagtcaacgataaattacattactttggtctacttggcagaaggactgaaggacaacatattgaagccattgcggaatctgtgttcagtacattacgacctattgaaacggagtttacaatgcccatgggagattttcaagcatttgaagcaacaagacaggcaatgaataaggttatgaaggcactagaagctgatgaggtcacagccattggggtctacggaatgggaggagttggaaaatcaaccatggttgaacatgtttgtgcagaagttcgggataatgggatgtttcatcaggtgatttcagctgttgtatcccaaaaccctgacttgagaaaaattcaaggcacattggcagatatgttgggctttatattggaggaggagacagaaattggaagagctcgtagattgatgcagaggataaggagaggaaataggatccttgtaatcttggacaacatttgggagagaacagatttgtcaaatataggaattcccagctactacgagcttcaaagatgcaattccaaagtcctactcatcacaaggacacagaatgtctgtcatgccatggaatgccaatcaaacatttctcttgatgtcttatcagaagaagattcttggaccttatttgtgaacaaagcaagaacgtcttttgaatcgaccagtttgtgtgatgttgcaaagaaggtagctagagtatgtgctggtcttccagttgcgttgatagcagttgcgaaggcacttggtgataagtgtttggatgactggaaggaagcggctcgacgactagaggcttctcaacctgccagccttgaagatgggaaagttgtgttcaattgtataaaattaagctatgattacttgatatctgatgatgccaggtcatgcttcttgctttgttgcctcttcccagaagactatgatatccaaattgaagagttgttaaagtatgggatggggaaaggattgtttcaagattcctgcacaatgcaagatgccagagtaactgcacatttggtggtcaagtaccttaaagattgtagcttgcttttggaaactgaacaggacggatgtgtgaagatgcatgatgtcattcgggatgtggccataaggatttcgttgtctgaggatggcccactgttttttgtacaagctggttgtcaattaaaggaatggccaagtattagtgcacatgaaggctactctgctatttcactaattatgaataaaatttgcaagcttcctgaagagttggtatgtccgaaactccttattttgtttctgcaaagtaatgtttggttgaatgagatcccagaatatttctttcaaagtccgaatgtgttgagggtattagatctaagccgaactagaatttcttttctacccacatcattcaatatcttgatcaacctccagaccttgtatctagatggttgcttgtcaaccatagataacatatccatactcggaaaattgaaaaaacttgagattcttagtatgagagaacttcctcttgtggaactgccaaaagaaataggagatttgagccatctaaggatgttagacatcactggtgattatgttgataatgttccgtctgaagtgatatgcaaccttaatttgttagaggaactatacatgcagtgtaattttgcagactgggggagtaaagttgagggagcaggagaagaaaatattgttgcgtttgatgagttaactggcttgtcatgtctaaatgttttgaaggttttcatatctgatgctaaatgtttgcctaaacatgtggaggttgaaccaaattgggtaaactttgatatttgtatcagcagagacccatccatcagaaaagtgtcgttggtttcaagttcttcacccgcttttacaagagccttgactcttgatacaaccatcaatgccttaccaggttggtttatcaatgcggtgacaatgaaagcagagaaactgcagtatataatgtgttggggattagataacattcttgtggaatatgactgtgggagattacatgcactgaagtatttatctgttattggccccaatgagaacttgaaaatgttgatgaacacagtaacacgcttttggaatgaaccagtgtttcagaacttggaagagttgcatctcgttcaagtggattgcctgaaggagttatgtgttggtgaattgccacctgggtctctatgcaatcttaggttactgaaggtgaaacattgctatgaattggtggatgcactcctaccgtcacggttgctgcagagattacaaaatctggaagaactgatttgtgaagagatagatgaattggaatatgtttttggatgtgaagggcttgagccagaacaaatgatattgacacaattgatagaaatgagattggagaatctagggaaactaataaagatatggaatggtcctgctcattgtgcaatcttccagaatcttcagagtttggtagtttccaggtgctttgaactggaaaatctcttcacagctgatgtagctcaatgtcttttgcacttggaagatctttcagtggagctttgcccaatgttggacaacattattgaagcaagtaaggacacagtggacaacaagattgtttttccagaattgaagaacttaactttgataaagcttccacaactcacaaggttctgcagcagtacaggcagtgctattgagtgccctttactggaatacttgtatgtggagaggtgcccccagttttcaacgtctgacttccatagcaggaacaaagtcgaacccaaacatccacaacatttggacattgtattgagaagggccagagcagagaaaagaagaaaaatcaaattcacagaggtcgtccaagaagacaaactgctgcctcagccggcttccggcaaatctcggttagttgatcctcgatatgcttttcttccacctcggccctcttctctcatcattaatctctctctctctctcttcttcctcgatgtgccttggacgacgatttgcatctacgtcacctccaaatctgcatctaagattttgctcgagaagttcatggcgcatcctcagttcctgacttcctccccagatcgcgatcgtgccggcctccgctccaccggagacttcaccagcgtctga

Protein Analysis

2223

Amino Acids

251.25

Weight (kDa)

5.63

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1181
Acc36I ACCTGC 3 cut(s) 2497, 3148, 4336
Acc65I GGTACC 1 cut(s) 1764
AccB1I GGYRCC 3 cut(s) 110, 1764, 6258
AccBSI CCGCTC 1 cut(s) 6645
AccI GTMKAC 5 cut(s) 948, 1447, 3288, 3547, 3735
AccII CGCG 1 cut(s) 6627
AciI CCGC 5 cut(s) 3590, 4301, 5400, 5465, 6643
AclWI GGATC 7 cut(s) 484, 1168, 2625, 3955, 3968, 4828, 6437
AcoI YGGCCR 4 cut(s) 723, 1913, 4629, 4700
AcsI RAATTY 8 cut(s) 579, 1017, 2322, 3858, 4014, 4755, 4896, 6374
AcvI CACGTG 1 cut(s) 3176
AdeI CACNNNGTG 2 cut(s) 787, 4271
AfiI CCNNNNNNNGG 6 cut(s) 1063, 2984, 3304, 6094, 6235, 6422
AflIII ACRYGT 5 cut(s) 988, 2459, 3070, 3775, 5305
AhlI ACTAGT 1 cut(s) 1495
AjnI CCWGG 7 cut(s) 1185, 2047, 2932, 4403, 5446, 5713, 6002
AloI GAACNNNNNNTCC 2 cut(s) 3584, 3616
Alw21I GWGCWC 4 cut(s) 1000, 1525, 3925, 4717
Alw44I GTGCAC 2 cut(s) 996, 4713
AlwI GGATC 7 cut(s) 484, 1168, 2625, 3955, 3968, 4828, 6437
AlwNI CAGNNNCTG 5 cut(s) 302, 2179, 3485, 6607, 6669
Ama87I CYCGRG 3 cut(s) 210, 1518, 6578
ApaLI GTGCAC 2 cut(s) 996, 4713
ApoI RAATTY 8 cut(s) 579, 1017, 2322, 3858, 4014, 4755, 4896, 6374
AseI ATTAAT 2 cut(s) 1952, 6489
Asp700I GAANNNNTTC 2 cut(s) 1071, 5273
Asp718I GGTACC 1 cut(s) 1764
AspLEI GCGC 2 cut(s) 916, 6595
AsuC2I CCSGG 1 cut(s) 1980
AvaI CYCGRG 3 cut(s) 210, 1518, 6578
AvaII GGWCC 6 cut(s) 691, 2798, 2965, 3164, 4146, 5954
BaeGI GKGCMC 6 cut(s) 1000, 1480, 3470, 4717, 6230, 6263
BalI TGGCCA 3 cut(s) 1915, 4631, 4702
BamHI GGATCC 1 cut(s) 3960
BanI GGYRCC 3 cut(s) 110, 1764, 6258
BanII GRGCYC 1 cut(s) 3925
BarI GAAGNNNNNNTAC 4 cut(s) 346, 378, 2696, 2728
BbrPI CACGTG 1 cut(s) 3176
BbsI GAAGAC 7 cut(s) 1124, 1659, 1872, 3282, 4226, 4446, 6402
Bbv12I GWGCWC 4 cut(s) 1000, 1525, 3925, 4717
BbvCI CCTCAGC 1 cut(s) 6411
BceAI ACGGC 5 cut(s) 586, 923, 967, 1392, 1742
BcgI CGANNNNNNTGC 2 cut(s) 917, 951
BciT130I CCWGG 7 cut(s) 1187, 2049, 2934, 4405, 5448, 5715, 6004
BciVI GTATCC 2 cut(s) 1057, 3844
BclI TGATCA 3 cut(s) 418, 2277, 4929
BcnI CCSGG 1 cut(s) 1980
BcuI ACTAGT 1 cut(s) 1495
BfmI CTRYAG 6 cut(s) 386, 2018, 3046, 5489, 5795, 6199
BfoI RGCGCY 1 cut(s) 917
BfuAI ACCTGC 3 cut(s) 2497, 3148, 4336
BfuI GTATCC 2 cut(s) 1057, 3844
BglII AGATCT 4 cut(s) 424, 769, 4879, 6067
Bme1390I CCNGG 8 cut(s) 1187, 1980, 2049, 2934, 4405, 5448, 5715, 6004
Bme18I GGWCC 6 cut(s) 691, 2798, 2965, 3164, 4146, 5954
BmeT110I CYCGRG 3 cut(s) 210, 1518, 6578
BmiI GGNNCC 7 cut(s) 112, 1766, 2800, 2844, 3962, 5581, 6260
BmrFI CCNGG 8 cut(s) 1187, 1980, 2049, 2934, 4405, 5448, 5715, 6004
BmrI ACTGGG 4 cut(s) 2796, 3466, 5194, 6259
BmuI ACTGGG 4 cut(s) 2796, 3466, 5194, 6259
BoxI GACNNNNGTC 1 cut(s) 609
BpiI GAAGAC 7 cut(s) 1124, 1659, 1872, 3282, 4226, 4446, 6402
BpmI CTGGAG 4 cut(s) 165, 1988, 3053, 4922
Bpu10I CCTNAGC 2 cut(s) 2093, 6411
BpuEI CTTGAG 7 cut(s) 2237, 2534, 2656, 3240, 3871, 5030, 5894
BpuMI CCSGG 1 cut(s) 1980
Bsa29I ATCGAT 1 cut(s) 1397
BsaAI YACGTR 2 cut(s) 2716, 3176
BsaBI GATNNNNATC 5 cut(s) 423, 679, 768, 6539, 6627
BsaI GGTCTC 3 cut(s) 2943, 5349, 5724
BsaWI WCCGGW 1 cut(s) 6650
BsaXI ACNNNNNCTCC 4 cut(s) 1974, 2004, 6536, 6566
Bsc4I CCNNNNNNNGG 6 cut(s) 1063, 2984, 3304, 6094, 6235, 6422
Bse118I RCCGGY 2 cut(s) 6415, 6635
Bse3DI GCAATG 5 cut(s) 3186, 3214, 3585, 3687, 5752
Bse8I GATNNNNATC 5 cut(s) 423, 679, 768, 6539, 6627
BseBI CCWGG 7 cut(s) 1187, 2049, 2934, 4405, 5448, 5715, 6004
BseCI ATCGAT 1 cut(s) 1397
BseJI GATNNNNATC 5 cut(s) 423, 679, 768, 6539, 6627
BseLI CCNNNNNNNGG 6 cut(s) 1063, 2984, 3304, 6094, 6235, 6422
BseMI GCAATG 5 cut(s) 3186, 3214, 3585, 3687, 5752
BseMII CTCAG 6 cut(s) 23, 246, 3104, 4641, 6425, 6614
BseRI GAGGAG 5 cut(s) 406, 1166, 3762, 3914, 3917
BseSI GKGCMC 6 cut(s) 1000, 1480, 3470, 4717, 6230, 6263
BseYI CCCAGC 3 cut(s) 734, 1096, 4019
BsgI GTGCAG 4 cut(s) 820, 3804, 4492, 4518
Bsh1236I CGCG 1 cut(s) 6627
Bsh1285I CGRYCG 2 cut(s) 382, 6631
BshNI GGYRCC 3 cut(s) 110, 1764, 6258
BshVI ATCGAT 1 cut(s) 1397
BsiEI CGRYCG 2 cut(s) 382, 6631
BsiHKAI GWGCWC 4 cut(s) 1000, 1525, 3925, 4717
BsiHKCI CYCGRG 3 cut(s) 210, 1518, 6578
BsiSI CCGG 6 cut(s) 77, 1980, 6416, 6423, 6636, 6651
BslFI GGGAC 2 cut(s) 2573, 2784
BslI CCNNNNNNNGG 6 cut(s) 1063, 2984, 3304, 6094, 6235, 6422
BsmFI GGGAC 2 cut(s) 2573, 2784
BsmI GAATGC 4 cut(s) 1568, 2032, 2833, 4103
Bso31I GGTCTC 3 cut(s) 2943, 5349, 5724
BsoBI CYCGRG 3 cut(s) 210, 1518, 6578
Bsp1286I GDGCHC 8 cut(s) 1000, 1480, 1525, 3470, 3925, 4717, 6230, 6263
Bsp1407I TGTACA 2 cut(s) 3402, 4672
Bsp19I CCATGG 6 cut(s) 894, 978, 2758, 3642, 3765, 4092
Bsp68I TCGCGA 1 cut(s) 6627
BspACI CCGC 5 cut(s) 3590, 4301, 5400, 5465, 6643
BspCNI CTCAG 6 cut(s) 22, 245, 3105, 4642, 6424, 6613
BspDI ATCGAT 1 cut(s) 1397
BspFNI CGCG 1 cut(s) 6627
BspHI TCATGA 1 cut(s) 1300
BspLI GGNNCC 7 cut(s) 112, 1766, 2800, 2844, 3962, 5581, 6260
BspMAI CTGCAG 4 cut(s) 390, 5493, 5799, 6203
BspMI ACCTGC 3 cut(s) 2497, 3148, 4336
BspPI GGATC 7 cut(s) 484, 1168, 2625, 3955, 3968, 4828, 6437
BspQI GCTCTTC 3 cut(s) 2502, 2811, 3913
BspT107I GGYRCC 3 cut(s) 110, 1764, 6258
BspTNI GGTCTC 3 cut(s) 2943, 5349, 5724
BsrBI CCGCTC 1 cut(s) 6645
BsrDI GCAATG 5 cut(s) 3186, 3214, 3585, 3687, 5752
BsrFI RCCGGY 2 cut(s) 6415, 6635
BsrGI TGTACA 2 cut(s) 3402, 4672
BssAI RCCGGY 2 cut(s) 6415, 6635
BssT1I CCWWGG 8 cut(s) 894, 978, 2758, 3441, 3642, 3765, 4092, 6524
Bst2UI CCWGG 7 cut(s) 1187, 2049, 2934, 4405, 5448, 5715, 6004
BstAUI TGTACA 2 cut(s) 3402, 4672
BstBAI YACGTR 2 cut(s) 2716, 3176
BstC8I GCNNGC 9 cut(s) 961, 1784, 1894, 1913, 4333, 4571, 4763, 6417, 6637
BstDSI CCRYGG 6 cut(s) 894, 978, 2758, 3642, 3765, 4092
BstFNI CGCG 1 cut(s) 6627
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 2 cut(s) 916, 6595
BstMCI CGRYCG 2 cut(s) 382, 6631
BstNI CCWGG 7 cut(s) 1187, 2049, 2934, 4405, 5448, 5715, 6004
BstNSI RCATGY 9 cut(s) 992, 1004, 2374, 2463, 3074, 3779, 5167, 5309, 5555
BstPAI GACNNNNGTC 1 cut(s) 609
BstSCI CCNGG 8 cut(s) 1185, 1978, 2047, 2932, 4403, 5446, 5713, 6002
BstSFI CTRYAG 6 cut(s) 386, 2018, 3046, 5489, 5795, 6199
BstSLI GKGCMC 6 cut(s) 1000, 1480, 3470, 4717, 6230, 6263
BstSNI TACGTA 1 cut(s) 2716
BstUI CGCG 1 cut(s) 6627
BstV2I GAAGAC 7 cut(s) 1124, 1659, 1872, 3282, 4226, 4446, 6402
BstX2I RGATCY 8 cut(s) 424, 769, 1173, 2630, 3960, 4833, 4879, 6067
BstYI RGATCY 8 cut(s) 424, 769, 1173, 2630, 3960, 4833, 4879, 6067
Bsu15I ATCGAT 1 cut(s) 1397
BsuI GTATCC 2 cut(s) 1057, 3844
BsuTUI ATCGAT 1 cut(s) 1397
BtgI CCRYGG 6 cut(s) 894, 978, 2758, 3642, 3765, 4092
BtsI GCAGTG 4 cut(s) 704, 933, 5174, 6220
BtuMI TCGCGA 1 cut(s) 6627
BveI ACCTGC 3 cut(s) 2497, 3148, 4336
Cac8I GCNNGC 9 cut(s) 961, 1784, 1894, 1913, 4333, 4571, 4763, 6417, 6637
CaiI CAGNNNCTG 5 cut(s) 302, 2179, 3485, 6607, 6669
CciI TCATGA 1 cut(s) 1300
CfoI GCGC 2 cut(s) 916, 6595
Cfr10I RCCGGY 2 cut(s) 6415, 6635
ClaI ATCGAT 1 cut(s) 1397
CseI GACGC 1 cut(s) 6655
CsiI ACCWGGT 1 cut(s) 5446
CspCI CAANNNNNGTGG 4 cut(s) 82, 117, 6306, 6341
DraI TTTAAA 2 cut(s) 1905, 2037
DraIII CACNNNGTG 2 cut(s) 787, 4271
EaeI YGGCCR 4 cut(s) 723, 1913, 4629, 4700
Ecl136II GAGCTC 1 cut(s) 3923
Eco105I TACGTA 1 cut(s) 2716
Eco130I CCWWGG 8 cut(s) 894, 978, 2758, 3441, 3642, 3765, 4092, 6524
Eco24I GRGCYC 1 cut(s) 3925
Eco31I GGTCTC 3 cut(s) 2943, 5349, 5724
Eco32I GATATC 5 cut(s) 1966, 2340, 3427, 4392, 4450
Eco47I GGWCC 6 cut(s) 691, 2798, 2965, 3164, 4146, 5954
Eco53kI GAGCTC 1 cut(s) 3923
Eco72I CACGTG 1 cut(s) 3176
Eco88I CYCGRG 3 cut(s) 210, 1518, 6578
EcoICRI GAGCTC 1 cut(s) 3923
EcoRI GAATTC 2 cut(s) 579, 4014
EcoRII CCWGG 7 cut(s) 1185, 2047, 2932, 4403, 5446, 5713, 6002
EcoRV GATATC 5 cut(s) 1966, 2340, 3427, 4392, 4450
EcoT14I CCWWGG 8 cut(s) 894, 978, 2758, 3441, 3642, 3765, 4092, 6524
EcoT22I ATGCAT 2 cut(s) 2501, 4611
EcoT38I GRGCYC 1 cut(s) 3925
ErhI CCWWGG 8 cut(s) 894, 978, 2758, 3441, 3642, 3765, 4092, 6524
FalI AAGNNNNNCTT 4 cut(s) 1610, 1642, 4159, 4191
FaqI GGGAC 2 cut(s) 2573, 2784
FauI CCCGC 1 cut(s) 5407
FauNDI CATATG 2 cut(s) 2772, 3155
FbaI TGATCA 3 cut(s) 418, 2277, 4929
FblI GTMKAC 5 cut(s) 948, 1447, 3288, 3547, 3735
FriOI GRGCYC 1 cut(s) 3925
GlaI GCGC 2 cut(s) 915, 6594
GsaI CCCAGC 3 cut(s) 738, 1100, 4023
GsuI CTGGAG 4 cut(s) 165, 1988, 3053, 4922
HaeII RGCGCY 1 cut(s) 917
HapII CCGG 6 cut(s) 77, 1980, 6416, 6423, 6636, 6651
HgaI GACGC 1 cut(s) 6655
HhaI GCGC 2 cut(s) 916, 6595
Hin6I GCGC 2 cut(s) 914, 6593
HinP1I GCGC 2 cut(s) 914, 6593
HincII GTYRAC 4 cut(s) 604, 3523, 4968, 5241
HindII GTYRAC 4 cut(s) 604, 3523, 4968, 5241
HindIII AAGCTT 4 cut(s) 2151, 2213, 4763, 6176
HpaI GTTAAC 1 cut(s) 5241
HpaII CCGG 6 cut(s) 77, 1980, 6416, 6423, 6636, 6651
Hpy99I CGWCG 2 cut(s) 4311, 6535
HpyCH4IV ACGT 5 cut(s) 2715, 3175, 4172, 6275, 6546
HpySE526I ACGT 5 cut(s) 2715, 3175, 4172, 6275, 6546
HspAI GCGC 2 cut(s) 914, 6593
KpnI GGTACC 1 cut(s) 1768
KroI GCCGGC 2 cut(s) 6415, 6635
KroNI GCCGGC 2 cut(s) 6417, 6637
Ksp22I TGATCA 3 cut(s) 418, 2277, 4929
KspAI GTTAAC 1 cut(s) 5241
LguI GCTCTTC 3 cut(s) 2502, 2811, 3913
LmnI GCTCC 6 cut(s) 184, 1243, 3175, 5204, 6079, 6650
MabI ACCWGGT 1 cut(s) 5446
MaeII ACGT 5 cut(s) 2715, 3175, 4172, 6275, 6546
MbiI CCGCTC 1 cut(s) 6645
MfeI CAATTG 6 cut(s) 468, 489, 2527, 3269, 4360, 5900
MflI RGATCY 8 cut(s) 424, 769, 1173, 2630, 3960, 4833, 4879, 6067
MhlI GDGCHC 8 cut(s) 1000, 1480, 1525, 3470, 3925, 4717, 6230, 6263
MlsI TGGCCA 3 cut(s) 1915, 4631, 4702
MluNI TGGCCA 3 cut(s) 1915, 4631, 4702
MlyI GAGTC 3 cut(s) 1382, 2647, 5413
MmeI TCCRAC 4 cut(s) 946, 2899, 3733, 6075
Mox20I TGGCCA 3 cut(s) 1915, 4631, 4702
Mph1103I ATGCAT 2 cut(s) 2501, 4611
MroNI GCCGGC 2 cut(s) 6415, 6635
MroXI GAANNNNTTC 2 cut(s) 1071, 5273
MscI TGGCCA 3 cut(s) 1915, 4631, 4702
MslI CAYNNNNRTG 6 cut(s) 993, 1573, 3453, 3780, 5525, 5757
Msp20I TGGCCA 3 cut(s) 1915, 4631, 4702
MspA1I CMGCKG 6 cut(s) 284, 302, 1096, 1748, 3827, 6035
MspI CCGG 6 cut(s) 77, 1980, 6416, 6423, 6636, 6651
MspR9I CCNGG 8 cut(s) 1187, 1980, 2049, 2934, 4405, 5448, 5715, 6004
MunI CAATTG 6 cut(s) 468, 489, 2527, 3269, 4360, 5900
Mva1269I GAATGC 4 cut(s) 1568, 2032, 2833, 4103
MvaI CCWGG 7 cut(s) 1187, 2049, 2934, 4405, 5448, 5715, 6004
MvnI CGCG 1 cut(s) 6627
NaeI GCCGGC 2 cut(s) 6417, 6637
NciI CCSGG 1 cut(s) 1980
NcoI CCATGG 6 cut(s) 894, 978, 2758, 3642, 3765, 4092
NdeI CATATG 2 cut(s) 2772, 3155
NgoMIV GCCGGC 2 cut(s) 6415, 6635
NlaIV GGNNCC 7 cut(s) 112, 1766, 2800, 2844, 3962, 5581, 6260
NmeAIII GCCGAG 2 cut(s) 1744, 6448
NmuCI GTSAC 6 cut(s) 931, 2893, 3718, 5467, 5784, 6547
NruI TCGCGA 1 cut(s) 6627
NsiI ATGCAT 2 cut(s) 2501, 4611
NspI RCATGY 9 cut(s) 992, 1004, 2374, 2463, 3074, 3779, 5167, 5309, 5555
PaeR7I CTCGAG 3 cut(s) 210, 1518, 6578
PagI TCATGA 1 cut(s) 1300
PciI ACATGT 5 cut(s) 988, 2459, 3070, 3775, 5305
PciSI GCTCTTC 3 cut(s) 2502, 2811, 3913
PctI GAATGC 4 cut(s) 1568, 2032, 2833, 4103
PdiI GCCGGC 2 cut(s) 6417, 6637
PdmI GAANNNNTTC 2 cut(s) 1071, 5273
PflFI GACNNNGTC 1 cut(s) 929
PfoI TCCNGGA 1 cut(s) 1185
Ple19I CGATCG 2 cut(s) 382, 6631
PleI GAGTC 3 cut(s) 1382, 2646, 5413
PmaCI CACGTG 1 cut(s) 3176
PmlI CACGTG 1 cut(s) 3176
PpsI GAGTC 3 cut(s) 1382, 2646, 5413
Ppu21I YACGTR 2 cut(s) 2716, 3176
PscI ACATGT 5 cut(s) 988, 2459, 3070, 3775, 5305
PshAI GACNNNNGTC 1 cut(s) 609
PshBI ATTAAT 2 cut(s) 1952, 6489
PsiI TTATAA 1 cut(s) 1181
Psp124BI GAGCTC 1 cut(s) 3925
Psp6I CCWGG 7 cut(s) 1185, 2047, 2932, 4403, 5446, 5713, 6002
PspCI CACGTG 1 cut(s) 3176
PspFI CCCAGC 3 cut(s) 734, 1096, 4019
PspGI CCWGG 7 cut(s) 1185, 2047, 2932, 4403, 5446, 5713, 6002
PspN4I GGNNCC 7 cut(s) 112, 1766, 2800, 2844, 3962, 5581, 6260
PspXI VCTCGAGB 1 cut(s) 1518
PstI CTGCAG 4 cut(s) 390, 5493, 5799, 6203
PstNI CAGNNNCTG 5 cut(s) 302, 2179, 3485, 6607, 6669
PsuI RGATCY 8 cut(s) 424, 769, 1173, 2630, 3960, 4833, 4879, 6067
PsyI GACNNNGTC 1 cut(s) 929
PvuI CGATCG 2 cut(s) 382, 6631
PvuII CAGCTG 6 cut(s) 284, 302, 1096, 1748, 3827, 6035
RruI TCGCGA 1 cut(s) 6627
RseI CAYNNNNRTG 6 cut(s) 993, 1573, 3453, 3780, 5525, 5757
SacI GAGCTC 1 cut(s) 3925
SapI GCTCTTC 3 cut(s) 2502, 2811, 3913
SchI GAGTC 3 cut(s) 1382, 2647, 5413
ScrFI CCNGG 8 cut(s) 1187, 1980, 2049, 2934, 4405, 5448, 5715, 6004
SduI GDGCHC 8 cut(s) 1000, 1480, 1525, 3470, 3925, 4717, 6230, 6263
SexAI ACCWGGT 1 cut(s) 5446
SfcI CTRYAG 6 cut(s) 386, 2018, 3046, 5489, 5795, 6199
Sfr274I CTCGAG 3 cut(s) 210, 1518, 6578
SinI GGWCC 6 cut(s) 691, 2798, 2965, 3164, 4146, 5954
SlaI CTCGAG 3 cut(s) 210, 1518, 6578
SmiI ATTTAAAT 1 cut(s) 2037
SmiMI CAYNNNNRTG 6 cut(s) 993, 1573, 3453, 3780, 5525, 5757
SnaBI TACGTA 1 cut(s) 2716
SpeI ACTAGT 1 cut(s) 1495
SsiI CCGC 5 cut(s) 3590, 4301, 5400, 5465, 6643
SspI AATATT 5 cut(s) 1852, 2470, 2992, 4844, 5221
SstI GAGCTC 1 cut(s) 3925
StyD4I CCNGG 8 cut(s) 1185, 1978, 2047, 2932, 4403, 5446, 5713, 6002
StyI CCWWGG 8 cut(s) 894, 978, 2758, 3441, 3642, 3765, 4092, 6524
SwaI ATTTAAAT 1 cut(s) 2037
TaiI ACGT 5 cut(s) 2718, 3178, 4175, 6278, 6549
TatI WGTACW 6 cut(s) 808, 835, 3402, 3605, 4672, 6206
TauI GCSGC 1 cut(s) 4304
TseFI GTSAC 6 cut(s) 931, 2893, 3718, 5467, 5784, 6547
Tsp45I GTSAC 6 cut(s) 931, 2893, 3718, 5467, 5784, 6547
TspGWI ACGGA 6 cut(s) 1297, 3344, 3641, 3753, 4608, 5109
Tth111I GACNNNGTC 1 cut(s) 929
VneI GTGCAC 2 cut(s) 996, 4713
VpaK11BI GGWCC 6 cut(s) 691, 2798, 2965, 3164, 4146, 5954
VspI ATTAAT 2 cut(s) 1952, 6489
XapI RAATTY 8 cut(s) 579, 1017, 2322, 3858, 4014, 4755, 4896, 6374
XbaI TCTAGA 3 cut(s) 2161, 3059, 4951
XceI RCATGY 9 cut(s) 992, 1004, 2374, 2463, 3074, 3779, 5167, 5309, 5555
XcmI CCANNNNNNNNNTGG 1 cut(s) 2809
XhoI CTCGAG 3 cut(s) 210, 1518, 6578
XmiI GTMKAC 5 cut(s) 948, 1447, 3288, 3547, 3735
XmnI GAANNNNTTC 2 cut(s) 1071, 5273
Zsp2I ATGCAT 2 cut(s) 2501, 4611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.