Rmu_sc0005947.1_g000023

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005947.1
OG0000085
Physical Location & Seq
Reverse (-)
115699 .. 119000
3302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005947.1_g000023.1.cds

Sequence Viewer

Length: 3051 bp
atggtaaaacatgttggtaatcaagcccgcaaaaatgggatttttcatcatatggaggaacttgcaaagatttgtcaatgcatgaaagacgaaaacagaattcttccacttttctatcatgtcgaacctagtcatgttcgatttcagaaaaggagtttcgaagaagctttcaccaagcatgaaaactctaaccgacaccgatcagagaaggtgcaggagtggagagatgctttagcacaagtggcaaagttttctgggtggcatacacaaaattataagactgaaagagaacttgccgatgccatagtggactttgtgtgcagtatagtacaaccagttggaatcatcatgggagattttgaagcatttgaagcaacaagggaagccatggacaaggttacaaaagcgctaaaagatgatgaggtctcagctgtcggggtctatggaatgggaggcgttggcaagacaaccatggtaaaacatgttggtaatcaagcccgcaaaaatgggatttttcatcatgtgattatggctgtcatgtcccaaagccctgacttgatggaaattcagcacacattggcagagctgctggggatcgatttacaagagaagtcacaaagtggaagagcctctagattgaacaaagagataatgagaaaaaataaaatccttataatcttggatgacatttgggagagaatagaattgtcaagcatagggattcccagctacaaggaacttcaaaaatgcaattccaaagtcctactcacaacaaggatacagaatgtttgtcatgccatggagtgccaagaaatgatcacccttaatgtcctctcggaagatgattcttggaccttatttatgagaaatgcaagaaggtctttcgaaatgaccattttcagggatatagcgaggaaggtagctagagaatgttgtggtctaccaattgcattgatagcagttgcaagggcacttggagataaagacctgcgagaatggaaaaaggcagctcaaagactaaacaactcgcaaactgccaaccttgatgataagggagatgcatcccaatgtataaagttaagctacgattacttgaaagatgaggattgcaagtcattcttcttggtttgtagcctatttcctgaagactatgacatcccaatagaagacttgtttaggtatgcaattgggaaaggtgtgtttcgagatgctgacacaattgaagaagctagagaaacactacatatggtggtcacataccttaagaattcaagcttgcttttagatagtggcaaagaactatgtgtaaggatgcatgatgtcgttcgggatacaaccatgaaaattgcactatctgaagatggtcacgggttttttgtaaaagctggccgcagtttggaggattggccacgtcaattacaagaaggctactctgcggtctcactaatggggaatgaaatccgcacactaccagaagaattggtatgtccaaaactccaggttttattactacaagataattgccatatagaaaagttcccagaggccttctttcaaagttccaatgaactaagggtcttaaatcttagcaacacttgcattttattactaccccaatcattcagtcttctagccaacctccaagttttgcatttagatgatttgaagatcataactgacatttccatgcttggaaaactgaaaaaacttgagatccttagtatgagagaatcacacattggggaatttccaaaagaaataggagatttaaccaatctatggatgttggatttgactggtggacatattgtcacaattccatcaaaagttttttcaaagttgcataaactagaagaactgtacatgcaatgtgggttttgggactgggggagtgaagttgagggaggaggaggagaaaccaatgctggctttgatgagttgactagcttgccatatttaagagttttgaaggtttggatctcccatgcaaattgtatccctaaaaatgttgaactcaacccgaattgggttgagtttgatatatgtattggaagagatgacgagacggtggtctctcaatattgttataattcagtatgcttgacacttgacacagccatcagcacattaccggattggtttgtctttgtggtaataaacaaagcagagaagctagagtgggtagagtgcaaagggttgattgatttttgtgtggaatatgagcataggaggttagatagattgaagtatctctctataattgggtgcgatgagaacttgaaagagttgatgagcacaacaacatgggttccgaaagaacctgtgtttgagaacttggaagacttgcatctcagtcgagtagatttcatgaaagagttatgtcttggtgatttaccacaagggtctctattcagtctcaagttacttgaggttgactcttgttatgactgggggaacatacttttaccatcaaaattgttgcagagagtacgaaatctggaaactctaatttgtaatgatgttgatggaatggaatatgtatttggatgcgaaggatttgagccggaaaaatcaaaattgatagacttgtcattgaggagtttaaatgcagtaagaagcatatgtaatggtcctgctccacctgcaatgttccagactcttaaagttgtgtccattgaacaatgcagctttgtaggaagtcttttctcttatgaggcagctcagtgtctgtatcaattggaagacctttcagttggcagttgccctcttttggaaagagtgattgaagcaaacaaggaaacaatgaacaagaagaagaccgtttttccaaaattgaagaacttagttttgatgagacttcctatgttgtacagtggaagtgctactattgattttgagtgtcctttactcgaatgcttgtatttgaaggactgctcccagtttttatcttcaacctctgcttctgacttccacagtaggaaaaatgtccagttcaatgatgagcaacactacctgtctctatgggagagaatgtggggagacataatataa

Protein Analysis

1016

Amino Acids

116.05

Weight (kDa)

5.39

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 276, 674, 2088
AarI CACCTGC 1 cut(s) 2650
Acc36I ACCTGC 2 cut(s) 996, 2650
AccB7I CCANNNNNTGG 1 cut(s) 1779
AccI GTMKAC 1 cut(s) 940
AciI CCGC 5 cut(s) 28, 499, 1390, 1436, 1462
AclWI GGATC 3 cut(s) 602, 1708, 1985
AcoI YGGCCR 2 cut(s) 1387, 1406
AcsI RAATTY 4 cut(s) 99, 564, 1267, 1745
AcuI CTGAAG 2 cut(s) 1164, 1377
AdeI CACNNNGTG 1 cut(s) 620
AfaI GTAC 4 cut(s) 330, 1862, 2490, 2870
AfeI AGCGCT 1 cut(s) 408
AfiI CCNNNNNNNGG 5 cut(s) 900, 1396, 1779, 2026, 2770
AflII CTTAAG 1 cut(s) 1262
AflIII ACRYGT 2 cut(s) 10, 481
AhdI GACNNNNNGTC 1 cut(s) 1808
AjiI CACGTC 1 cut(s) 1412
AjnI CCWGG 1 cut(s) 1497
AjuI GAANNNNNNNTTGG 4 cut(s) 1722, 1754, 2526, 2558
Alw21I GWGCWC 1 cut(s) 2297
Alw26I GTCTC 9 cut(s) 430, 1444, 2057, 2077, 2409, 2420, 2848, 3021, 3033
AlwI GGATC 3 cut(s) 602, 1708, 1985
AlwNI CAGNNNCTG 1 cut(s) 2728
Aor51HI AGCGCT 1 cut(s) 408
AoxI GGCC 3 cut(s) 1387, 1406, 1545
ApeKI GCWGC 4 cut(s) 586, 1007, 2685, 2717
ApoI RAATTY 4 cut(s) 99, 564, 1267, 1745
AspLEI GCGC 1 cut(s) 409
AspS9I GGNCC 2 cut(s) 852, 2630
AsuHPI GGTGA 3 cut(s) 163, 811, 2399
AsuII TTCGAA 2 cut(s) 159, 885
AvaII GGWCC 2 cut(s) 852, 2630
BaeGI GKGCMC 1 cut(s) 973
BalI TGGCCA 1 cut(s) 1408
BbsI GAAGAC 6 cut(s) 1152, 1173, 1619, 2346, 2748, 2822
Bbv12I GWGCWC 1 cut(s) 2297
BbvI GCAGC 4 cut(s) 573, 1019, 2697, 2729
BccI CCATC 6 cut(s) 553, 1355, 1828, 2126, 2476, 2519
BcgI CGANNNNNNTGC 2 cut(s) 2336, 2370
BciT130I CCWGG 1 cut(s) 1499
BciVI GTATCC 3 cut(s) 771, 1324, 2006
BclI TGATCA 1 cut(s) 816
BcoDI GTCTC 9 cut(s) 430, 1444, 2057, 2077, 2409, 2420, 2848, 3021, 3033
BfaI CTAG 8 cut(s) 129, 633, 924, 1230, 1631, 1850, 1944, 2174
BfoI RGCGCY 1 cut(s) 410
BfrI CTTAAG 1 cut(s) 1262
BfuAI ACCTGC 2 cut(s) 996, 2650
BfuI GTATCC 3 cut(s) 771, 1324, 2006
BisI GCNGC 5 cut(s) 587, 1008, 1390, 2686, 2718
BlsI GCNGC 5 cut(s) 588, 1009, 1391, 2687, 2719
Bme1390I CCNGG 1 cut(s) 1499
Bme18I GGWCC 2 cut(s) 852, 2630
BmeRI GACNNNNNGTC 1 cut(s) 1808
BmgBI CACGTC 1 cut(s) 1412
BmgT120I GGNCC 2 cut(s) 852, 2630
BmiI GGNNCC 1 cut(s) 2310
BmrFI CCNGG 1 cut(s) 1499
BmrI ACTGGG 3 cut(s) 1894, 2458, 2932
BmsI GCATC 8 cut(s) 217, 289, 1048, 1070, 1198, 1302, 2356, 2537
BmuI ACTGGG 3 cut(s) 1894, 2458, 2932
BoxI GACNNNNGTC 1 cut(s) 2069
BpiI GAAGAC 6 cut(s) 1152, 1173, 1619, 2346, 2748, 2822
BplI GAGNNNNNCTC 2 cut(s) 2420, 2452
BpmI CTGGAG 1 cut(s) 1481
Bpu14I TTCGAA 2 cut(s) 159, 885
BpuEI CTTGAG 3 cut(s) 1730, 2402, 2447
Bsa29I ATCGAT 1 cut(s) 597
BsaI GGTCTC 4 cut(s) 430, 1444, 2077, 2409
BsaJI CCNNGG 3 cut(s) 387, 471, 798
BsaWI WCCGGW 1 cut(s) 2131
BsaXI ACNNNNNCTCC 2 cut(s) 3017, 3047
Bsc4I CCNNNNNNNGG 5 cut(s) 900, 1396, 1779, 2026, 2770
Bse1I ACTGG 6 cut(s) 335, 1801, 1889, 2453, 2938, 2989
Bse3DI GCAATG 2 cut(s) 1874, 2652
BseBI CCWGG 1 cut(s) 1499
BseCI ATCGAT 1 cut(s) 597
BseDI CCNNGG 3 cut(s) 387, 471, 798
BseGI GGATG 6 cut(s) 688, 1061, 1155, 1317, 1788, 2552
BseLI CCNNNNNNNGG 5 cut(s) 900, 1396, 1779, 2026, 2770
BseMI GCAATG 2 cut(s) 1874, 2652
BseMII CTCAG 3 cut(s) 441, 2365, 2735
BseNI ACTGG 6 cut(s) 335, 1801, 1889, 2453, 2938, 2989
BseRI GAGGAG 4 cut(s) 1920, 1923, 1926, 2611
BseSI GKGCMC 1 cut(s) 973
BseXI GCAGC 4 cut(s) 573, 1019, 2697, 2729
BseYI CCCAGC 2 cut(s) 589, 725
BsgI GTGCAG 2 cut(s) 233, 340
BshFI GGCC 3 cut(s) 1389, 1408, 1547
BshVI ATCGAT 1 cut(s) 597
BsiHKAI GWGCWC 1 cut(s) 2297
BsiSI CCGG 2 cut(s) 2132, 2564
BslFI GGGAC 2 cut(s) 526, 1895
BslI CCNNNNNNNGG 5 cut(s) 900, 1396, 1779, 2026, 2770
BsmAI GTCTC 9 cut(s) 430, 1444, 2057, 2077, 2409, 2420, 2848, 3021, 3033
BsmBI CGTCTC 1 cut(s) 2057
BsmFI GGGAC 2 cut(s) 526, 1895
BsmI GAATGC 1 cut(s) 2918
BsnI GGCC 3 cut(s) 1389, 1408, 1547
Bso31I GGTCTC 4 cut(s) 430, 1444, 2077, 2409
Bsp119I TTCGAA 2 cut(s) 159, 885
Bsp1286I GDGCHC 2 cut(s) 973, 2297
Bsp1407I TGTACA 2 cut(s) 1860, 2868
Bsp143I GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
Bsp19I CCATGG 3 cut(s) 387, 471, 798
BspACI CCGC 5 cut(s) 28, 499, 1390, 1436, 1462
BspANI GGCC 3 cut(s) 1389, 1408, 1547
BspCNI CTCAG 3 cut(s) 440, 2364, 2734
BspDI ATCGAT 1 cut(s) 597
BspHI TCATGA 1 cut(s) 2367
BspLI GGNNCC 1 cut(s) 2310
BspMI ACCTGC 2 cut(s) 996, 2650
BspPI GGATC 3 cut(s) 602, 1708, 1985
BspQI GCTCTTC 1 cut(s) 619
BspT104I TTCGAA 2 cut(s) 159, 885
BspTI CTTAAG 1 cut(s) 1262
BspTNI GGTCTC 4 cut(s) 430, 1444, 2077, 2409
BsrDI GCAATG 2 cut(s) 1874, 2652
BsrGI TGTACA 2 cut(s) 1860, 2868
BsrI ACTGG 6 cut(s) 335, 1801, 1889, 2453, 2938, 2989
BssECI CCNNGG 3 cut(s) 387, 471, 798
BssMI GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
BssT1I CCWWGG 3 cut(s) 387, 471, 798
Bst2UI CCWGG 1 cut(s) 1499
Bst4CI ACNGT 5 cut(s) 1860, 2068, 2821, 2873, 2975
Bst6I CTCTTC 2 cut(s) 619, 2047
BstAFI CTTAAG 1 cut(s) 1262
BstAPI GCANNNNNTGC 1 cut(s) 1596
BstAUI TGTACA 2 cut(s) 1860, 2868
BstBI TTCGAA 2 cut(s) 159, 885
BstC8I GCNNGC 6 cut(s) 28, 499, 1277, 1387, 1927, 1949
BstDEI CTNAG 7 cut(s) 427, 1571, 1586, 1718, 2351, 2721, 2842
BstDSI CCRYGG 3 cut(s) 387, 471, 798
BstF5I GGATG 6 cut(s) 688, 1061, 1155, 1317, 1788, 2552
BstH2I RGCGCY 1 cut(s) 410
BstHHI GCGC 1 cut(s) 409
BstKTI GATC 6 cut(s) 203, 597, 819, 1671, 1716, 1980
BstMAI GTCTC 9 cut(s) 430, 1444, 2057, 2077, 2409, 2420, 2848, 3021, 3033
BstMBI GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
BstMWI GCNNNNNNNGC 5 cut(s) 242, 371, 956, 1596, 2642
BstNI CCWGG 1 cut(s) 1499
BstNSI RCATGY 3 cut(s) 14, 485, 1867
BstPAI GACNNNNGTC 1 cut(s) 2069
BstSCI CCNGG 1 cut(s) 1497
BstSLI GKGCMC 1 cut(s) 973
BstV1I GCAGC 4 cut(s) 573, 1019, 2697, 2729
BstV2I GAAGAC 6 cut(s) 1152, 1173, 1619, 2346, 2748, 2822
BstX2I RGATCY 2 cut(s) 1713, 1977
BstYI RGATCY 2 cut(s) 1713, 1977
Bsu15I ATCGAT 1 cut(s) 597
BsuI GTATCC 3 cut(s) 771, 1324, 2006
BsuRI GGCC 3 cut(s) 1389, 1408, 1547
BsuTUI ATCGAT 1 cut(s) 597
BtgI CCRYGG 3 cut(s) 387, 471, 798
BtgZI GCGATG 1 cut(s) 2283
BtrI CACGTC 1 cut(s) 1412
BtsCI GGATG 6 cut(s) 688, 1061, 1155, 1317, 1788, 2552
BtsIMutI CAGTG 2 cut(s) 2729, 2878
BveI ACCTGC 2 cut(s) 996, 2650
Cac8I GCNNGC 6 cut(s) 28, 499, 1277, 1387, 1927, 1949
CaiI CAGNNNCTG 1 cut(s) 2728
CciI TCATGA 1 cut(s) 2367
CfoI GCGC 1 cut(s) 409
Cfr13I GGNCC 2 cut(s) 852, 2630
ClaI ATCGAT 1 cut(s) 597
Csp6I GTAC 4 cut(s) 329, 1861, 2489, 2869
CviQI GTAC 4 cut(s) 329, 1861, 2489, 2869
DdeI CTNAG 7 cut(s) 427, 1571, 1586, 1718, 2351, 2721, 2842
DpnI GATC 6 cut(s) 202, 596, 818, 1670, 1715, 1979
DpnII GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
DraI TTTAAA 1 cut(s) 2604
DraIII CACNNNGTG 1 cut(s) 620
DriI GACNNNNNGTC 1 cut(s) 1808
EaeI YGGCCR 2 cut(s) 1387, 1406
Eam1104I CTCTTC 2 cut(s) 619, 2047
Eam1105I GACNNNNNGTC 1 cut(s) 1808
EarI CTCTTC 2 cut(s) 619, 2047
Eco130I CCWWGG 3 cut(s) 387, 471, 798
Eco147I AGGCCT 1 cut(s) 1547
Eco31I GGTCTC 4 cut(s) 430, 1444, 2077, 2409
Eco47I GGWCC 2 cut(s) 852, 2630
Eco47III AGCGCT 1 cut(s) 408
Eco57I CTGAAG 2 cut(s) 1164, 1377
EcoRI GAATTC 2 cut(s) 99, 1267
EcoRII CCWGG 1 cut(s) 1497
EcoT14I CCWWGG 3 cut(s) 387, 471, 798
EcoT22I ATGCAT 3 cut(s) 83, 1063, 1317
ErhI CCWWGG 3 cut(s) 387, 471, 798
Esp3I CGTCTC 1 cut(s) 2057
FalI AAGNNNNNCTT 4 cut(s) 865, 897, 1103, 1135
FaqI GGGAC 2 cut(s) 526, 1895
FauI CCCGC 2 cut(s) 35, 506
FauNDI CATATG 3 cut(s) 51, 1245, 2621
FbaI TGATCA 1 cut(s) 816
FblI GTMKAC 1 cut(s) 940
Fnu4HI GCNGC 5 cut(s) 587, 1008, 1390, 2686, 2718
FokI GGATG 6 cut(s) 695, 1048, 1142, 1324, 1795, 2559
Fsp4HI GCNGC 5 cut(s) 587, 1008, 1390, 2686, 2718
FspBI CTAG 8 cut(s) 129, 633, 924, 1230, 1631, 1850, 1944, 2174
GlaI GCGC 1 cut(s) 408
GluI GCNGC 5 cut(s) 587, 1008, 1390, 2686, 2718
GsaI CCCAGC 2 cut(s) 593, 729
GsuI CTGGAG 1 cut(s) 1481
HaeII RGCGCY 1 cut(s) 410
HaeIII GGCC 3 cut(s) 1389, 1408, 1547
HapII CCGG 2 cut(s) 2132, 2564
HhaI GCGC 1 cut(s) 409
Hin6I GCGC 1 cut(s) 407
HinP1I GCGC 1 cut(s) 407
HincII GTYRAC 2 cut(s) 1941, 2434
HindII GTYRAC 2 cut(s) 1941, 2434
HindIII AAGCTT 2 cut(s) 165, 1273
HinfI GANTC 6 cut(s) 342, 721, 845, 1730, 2435, 2656
HpaII CCGG 2 cut(s) 2132, 2564
HphI GGTGA 3 cut(s) 163, 811, 2399
Hpy166II GTNNAC 5 cut(s) 310, 941, 1802, 1941, 2434
Hpy188I TCNGA 6 cut(s) 147, 205, 838, 1357, 2313, 2965
Hpy188III TCNNGA 7 cut(s) 633, 1142, 1205, 1328, 2368, 2498, 2653
Hpy8I GTNNAC 5 cut(s) 310, 941, 1802, 1941, 2434
HpyAV CCTTC 8 cut(s) 202, 870, 910, 1418, 1558, 1963, 2546, 2920
HpyCH4III ACNGT 5 cut(s) 1860, 2068, 2821, 2873, 2975
HpyCH4IV ACGT 1 cut(s) 1411
HpyF10VI GCNNNNNNNGC 5 cut(s) 242, 371, 956, 1596, 2642
HpyF3I CTNAG 7 cut(s) 427, 1571, 1586, 1718, 2351, 2721, 2842
HpySE526I ACGT 1 cut(s) 1411
HspAI GCGC 1 cut(s) 407
Ksp22I TGATCA 1 cut(s) 816
Kzo9I GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
LguI GCTCTTC 1 cut(s) 619
LmnI GCTCC 2 cut(s) 2641, 2939
Lsp1109I GCAGC 4 cut(s) 573, 1019, 2697, 2729
LweI GCATC 8 cut(s) 217, 289, 1048, 1070, 1198, 1302, 2356, 2537
MaeI CTAG 8 cut(s) 129, 633, 924, 1230, 1631, 1850, 1944, 2174
MaeII ACGT 1 cut(s) 1411
MaeIII GTNAC 6 cut(s) 397, 612, 1252, 1364, 1810, 2421
MalI GATC 6 cut(s) 202, 596, 818, 1670, 1715, 1979
MboI GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
MfeI CAATTG 4 cut(s) 945, 1185, 1218, 2735
MflI RGATCY 2 cut(s) 1713, 1977
MhlI GDGCHC 2 cut(s) 973, 2297
MlsI TGGCCA 1 cut(s) 1408
MluNI TGGCCA 1 cut(s) 1408
MlyI GAGTC 2 cut(s) 2429, 2650
MmeI TCCRAC 2 cut(s) 319, 1767
Mox20I TGGCCA 1 cut(s) 1408
Mph1103I ATGCAT 3 cut(s) 83, 1063, 1317
MscI TGGCCA 1 cut(s) 1408
MseI TTAA 8 cut(s) 825, 1079, 1263, 1580, 1769, 1958, 2603, 2661
MslI CAYNNNNRTG 3 cut(s) 1066, 1656, 1685
Msp20I TGGCCA 1 cut(s) 1408
MspA1I CMGCKG 1 cut(s) 431
MspCI CTTAAG 1 cut(s) 1262
MspI CCGG 2 cut(s) 2132, 2564
MspR9I CCNGG 1 cut(s) 1499
MunI CAATTG 4 cut(s) 945, 1185, 1218, 2735
Mva1269I GAATGC 1 cut(s) 2918
MvaI CCWGG 1 cut(s) 1499
MwoI GCNNNNNNNGC 5 cut(s) 242, 371, 956, 1596, 2642
NcoI CCATGG 3 cut(s) 387, 471, 798
NdeI CATATG 3 cut(s) 51, 1245, 2621
NdeII GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
NlaIV GGNNCC 1 cut(s) 2310
NmuCI GTSAC 4 cut(s) 612, 1252, 1364, 1810
NsiI ATGCAT 3 cut(s) 83, 1063, 1317
NspI RCATGY 3 cut(s) 14, 485, 1867
NspV TTCGAA 2 cut(s) 159, 885
PagI TCATGA 1 cut(s) 2367
PaqCI CACCTGC 1 cut(s) 2650
PceI AGGCCT 1 cut(s) 1547
PciI ACATGT 2 cut(s) 10, 481
PciSI GCTCTTC 1 cut(s) 619
PctI GAATGC 1 cut(s) 2918
PfeI GAWTC 4 cut(s) 342, 721, 845, 1730
PflMI CCANNNNNTGG 1 cut(s) 1779
PkrI GCNGC 5 cut(s) 588, 1009, 1391, 2687, 2719
PleI GAGTC 2 cut(s) 2429, 2650
PpsI GAGTC 2 cut(s) 2429, 2650
PscI ACATGT 2 cut(s) 10, 481
PshAI GACNNNNGTC 1 cut(s) 2069
PsiI TTATAA 3 cut(s) 276, 674, 2088
Psp6I CCWGG 1 cut(s) 1497
PspFI CCCAGC 2 cut(s) 589, 725
PspGI CCWGG 1 cut(s) 1497
PspN4I GGNNCC 1 cut(s) 2310
PspPI GGNCC 2 cut(s) 852, 2630
PstNI CAGNNNCTG 1 cut(s) 2728
PsuI RGATCY 2 cut(s) 1713, 1977
PvuII CAGCTG 1 cut(s) 431
RsaI GTAC 4 cut(s) 330, 1862, 2490, 2870
RsaNI GTAC 4 cut(s) 329, 1861, 2489, 2869
RseI CAYNNNNRTG 3 cut(s) 1066, 1656, 1685
SapI GCTCTTC 1 cut(s) 619
SaqAI TTAA 8 cut(s) 825, 1079, 1263, 1580, 1769, 1958, 2603, 2661
SatI GCNGC 5 cut(s) 587, 1008, 1390, 2686, 2718
Sau3AI GATC 6 cut(s) 200, 594, 816, 1668, 1713, 1977
Sau96I GGNCC 2 cut(s) 852, 2630
SchI GAGTC 2 cut(s) 2429, 2650
ScrFI CCNGG 1 cut(s) 1499
SduI GDGCHC 2 cut(s) 973, 2297
SfaNI GCATC 8 cut(s) 217, 289, 1048, 1070, 1198, 1302, 2356, 2537
SfuI TTCGAA 2 cut(s) 159, 885
SinI GGWCC 2 cut(s) 852, 2630
SmiMI CAYNNNNRTG 3 cut(s) 1066, 1656, 1685
SmlI CTYRAG 4 cut(s) 1262, 1709, 2417, 2426
SmoI CTYRAG 4 cut(s) 1262, 1709, 2417, 2426
SseBI AGGCCT 1 cut(s) 1547
SsiI CCGC 5 cut(s) 28, 499, 1390, 1436, 1462
SspI AATATT 1 cut(s) 2081
SspMI CTAG 8 cut(s) 129, 633, 924, 1230, 1631, 1850, 1944, 2174
StuI AGGCCT 1 cut(s) 1547
StyD4I CCNGG 1 cut(s) 1497
StyI CCWWGG 3 cut(s) 387, 471, 798
TaaI ACNGT 5 cut(s) 1860, 2068, 2821, 2873, 2975
TaiI ACGT 1 cut(s) 1414
TaqI TCGA 8 cut(s) 123, 139, 159, 597, 885, 1204, 2356, 2910
TatI WGTACW 3 cut(s) 328, 1860, 2868
TauI GCSGC 1 cut(s) 1392
TfiI GAWTC 4 cut(s) 342, 721, 845, 1730
Tru1I TTAA 8 cut(s) 825, 1079, 1263, 1580, 1769, 1958, 2603, 2661
Tru9I TTAA 8 cut(s) 825, 1079, 1263, 1580, 1769, 1958, 2603, 2661
TscAI CASTG 2 cut(s) 2729, 2878
TseFI GTSAC 4 cut(s) 612, 1252, 1364, 1810
TseI GCWGC 4 cut(s) 586, 1007, 2685, 2717
Tsp45I GTSAC 4 cut(s) 612, 1252, 1364, 1810
TspRI CASTG 2 cut(s) 2729, 2878
Van91I CCANNNNNTGG 1 cut(s) 1779
Vha464I CTTAAG 1 cut(s) 1262
VpaK11BI GGWCC 2 cut(s) 852, 2630
XapI RAATTY 4 cut(s) 99, 564, 1267, 1745
XbaI TCTAGA 1 cut(s) 632
XceI RCATGY 3 cut(s) 14, 485, 1867
XmiI GTMKAC 1 cut(s) 940
XspI CTAG 8 cut(s) 129, 633, 924, 1230, 1631, 1850, 1944, 2174
Zsp2I ATGCAT 3 cut(s) 83, 1063, 1317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.