pycom11g01530

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000085
Physical Location & Seq
Reverse (-)
1341786 .. 1344182
2397 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g01530.1

Sequence Viewer

Length: 2397 bp
ATGTTGGTTTGCAAGCGTGTAAAGACAAGCTCTTTGATCGATCGTGACGTCCAAATTATGGCTGTCATTTCCCAAAACCCGAACCTGGTTAAGATTCAACAACAGCTTGCAGAAATGCTGGCCTTGAATTTGAATGAGCAGACAGAAATAGCCAGAGCAGCTAGATTGAAGGAGAGAATAATGAGAGGAAAAAAGATCCTTATAATTTTGGACGACATTTGGAAGACAATAGATTTGTCTCTCATAAGGATCCCCGATCACTACGAGCTCCAAAACTGCAATTCCAAAGTTCTACTCACCACAAGGATATGGAATATATGTCATACCATGAAGAGCCAAAAAAAGATTCATCTCGATATCCTGTCAAAAGAAGATTCTTGGGCCTTGTTTGTGAAAAAGGCGAACATGCCTTTTCAATCAACCAATTTTTATGACACAGCGAGGAAGGTAGCTAGAGAATGCGGTGGTCTCCCAATTGCTTTGATTGCAGTTGCAAGAGCACTCGGAGATAAGGACTTAGAAGAATGGAGAGAAGCAGCTCGACGACTGGAGATGTCCCAAACTACCAACCTTGATGACGAGGGGGATGTGTTCAGGTGTATAAAGTTGAGCTACGATTACTTGAAGGACAATGACGCCAAGTCATGCTTCTTACTTTGCTGCTTATTCCCGGAGGACTCTGACATCCAAATCGAAGACTTGCTGAAGTATGGTATTGGGAAAGGATTGTTTCGAGATGCCAACTCAATGCAAGATGCCAGAAGAACAGCACATTTGGTGGCCGAGTACCTTAAAGCTTGTAGCTTGGTTTTGAATGGTGAACAAGACGGATGTGTAAGAATGCATGATGTGATTCGGGACATGGCAATACTAATTGCATCATCTGGGGATGGCCAAGGATTTTTCGTAAAAGCTGGCTGCCACTTAAAGGATTGGCCAATGAATTCACTCGAAGACTACTCCGCAATCTCCCTGATGGGGAATGAGATTTGCAATCTTCCTGACGAATTGGTATGTCCAAAACTCCAGATTTTATTACTACAGTCAAATTTTCAAGTAGAGGAGATCCCAGAAGATTTTTTCCAAAGCCCAAATGCATTAAGGGTATTCGACATAAGTAGTACCGAAATTTCTTCATTACCCACATCATTTAATCTCTTAACCAAGCTCCAAACGCTGCATCTAGATCGTTGTCAGTCAATAATGGATGTATCAATTCTCGGAGAACTGAAAAAACTGGAGGTTCTTAGTTTGAGAGAATCTGGTATTGAGGAATTGCCGGAAGAAATTGGACATTTGACCAATTTAAGGATGTTGGATCTCACTATGAGTACCTACATTGCAACAATTCCATCCAATGTGATATCGCGGCTGTCCAAATTAGAAGAACTATACATGCAACAGAGTTTCGCTGACTGGGGCAAGAAAGTTGAAGGAGAAGATGACAAAACTAATGCTAGTTTTGATGAGCTAATTAGCTTGTGTTACTTAAACATTTTGAAGGTTGACATTTCTGATGCAGAATGCCTTCCGAAAAATGTAGGGTTCCTTCGAAATTGGGTAAATTTTGATATATGTATCAGCAGAGACCTATTTTATCGGTCCGTGAATGTGCAATTATCAAAGAATACTATTACTCCATATTCAAGAGCCTTGCTTCTGGACACAACAATCAACAAGCTGCCAGACTGGTTTAACAGCACAGTAACGGAGAGAGTGGAGAAAATAATCTACATGGAGGCTAGAAGTTTAACTGACATTCTTGTCGAGTACGGTCATGGGAAGTTACATGGACTCAAGTTTTTGCATCTCCAAGAGTGCCGTGAGATGGTAACTTTGATGAACACAGTAACTAGGGTTCCAAATAAGCCTGTGTTCGAGAGCTTGGAAGAGTTGCATGTCTTCTACTGGGACTGCTTGCAACAGTTATGTGTTGGTGAATTACTGCCGGGGTCGCTTGGAAATCTCAAGATCTTGGAGGTGGAGCAGTGTGAAGGTGTGGCGGATGCACTTGTTCCATCTAATCTGTTGCGGAGACTACAAAATCTTGAAGTACTTATTGTATGTGGAGCTGATATGGTTTATATATTCAGATCTCAAGGGCTTGAACAAGGAGAAACGGTCTTGACAAAACTGAGAGAGATGAAACTGGAGAATCTACCGGAACTGACAAACATATGGAACGATCCTGCTCAGCCTGCAATGTTTCATAATCTTAGAATTCTGACAATTTCCAAGTGCAAGAAACTGAAAAGTCTCTTCACATTCGACATAGTTCAATGTCTGCTGCAATTGGAAGAGCTTTGGGTGGACGAATGCCATAGCTTGGACAAACTTTTCGGCCTAAGCGAGGGATTAATAGTGCAGGATTCCGATCGATCATTTTTCCACAACTGA

Protein Analysis

799

Amino Acids

91.12

Weight (kDa)

5.18

Isoelectric Point (pI)

48.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 16 - 136 1.3e-18 NB-ARC domain
LRR_8 PF13855 340 - 399 1.4e-08 Leucine rich repeat
LRR_14 PF23598 350 - 418 2.6e-06 Leucine-rich repeat region
LRR_14 PF23598 407 - 633 5.6e-11 Leucine-rich repeat region
LRR_RPS2 PF23247 640 - 773 1.5e-29 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 203
AasI GACNNNNNNGTC 1 cut(s) 1763
AatII GACGTC 1 cut(s) 51
AccB7I CCANNNNNTGG 2 cut(s) 58, 2326
AccII CGCG 1 cut(s) 1369
AciI CCGC 5 cut(s) 462, 963, 1369, 2003, 2032
AclWI GGATC 6 cut(s) 190, 244, 257, 1060, 1326, 2180
AcoI YGGCCR 3 cut(s) 780, 892, 935
AcsI RAATTY 6 cut(s) 127, 943, 1048, 1128, 1564, 2220
AcuI CTGAAG 1 cut(s) 725
AcyI GRCGYC 2 cut(s) 48, 636
AfaI GTAC 5 cut(s) 788, 1123, 1333, 1772, 2055
AfiI CCNNNNNNNGG 8 cut(s) 58, 85, 928, 978, 1308, 1828, 2326, 2350
AhdI GACNNNNNGTC 1 cut(s) 640
AjnI CCWGG 1 cut(s) 84
AjuI GAANNNNNNNTTGG 4 cut(s) 330, 362, 632, 664
Alw21I GWGCWC 2 cut(s) 270, 502
Alw26I GTCTC 5 cut(s) 243, 473, 1581, 2029, 2261
AlwI GGATC 6 cut(s) 190, 244, 257, 1060, 1326, 2180
AoxI GGCC 6 cut(s) 120, 381, 780, 892, 935, 2341
ApeKI GCWGC 7 cut(s) 158, 536, 660, 918, 1177, 1681, 2287
ApoI RAATTY 6 cut(s) 127, 943, 1048, 1128, 1564, 2220
ArsI GACNNNNNNTTYG 6 cut(s) 16, 48, 217, 249, 2321, 2353
AseI ATTAAT 1 cut(s) 2357
Asp700I GAANNNNTTC 1 cut(s) 1527
AspS9I GGNCC 2 cut(s) 381, 1602
AsuC2I CCSGG 2 cut(s) 671, 1950
AsuHPI GGTGA 3 cut(s) 289, 830, 1949
AsuII TTCGAA 1 cut(s) 1552
AvaII GGWCC 1 cut(s) 1602
BalI TGGCCA 2 cut(s) 894, 937
BamHI GGATCC 1 cut(s) 249
BanII GRGCYC 1 cut(s) 270
BarI GAAGNNNNNNTAC 2 cut(s) 1533, 1565
BbsI GAAGAC 4 cut(s) 230, 702, 960, 1894
Bbv12I GWGCWC 2 cut(s) 270, 502
BbvI GCAGC 7 cut(s) 170, 548, 647, 905, 1164, 1668, 2274
BccI CCATC 5 cut(s) 884, 970, 1360, 1822, 2026
BceAI ACGGC 1 cut(s) 1806
BcgI CGANNNNNNTGC 2 cut(s) 1169, 1203
BciT130I CCWGG 1 cut(s) 86
BcnI CCSGG 2 cut(s) 671, 1950
BcoDI GTCTC 5 cut(s) 243, 473, 1581, 2029, 2261
BfaI CTAG 6 cut(s) 162, 453, 1184, 1458, 1743, 1854
BfmI CTRYAG 1 cut(s) 1040
BglII AGATCT 2 cut(s) 1971, 2093
BisI GCNGC 8 cut(s) 159, 537, 661, 919, 1178, 1370, 1682, 2288
BlpI GCTNAGC 1 cut(s) 2193
BlsI GCNGC 8 cut(s) 160, 538, 662, 920, 1179, 1371, 1683, 2289
BmcAI AGTACT 1 cut(s) 2055
Bme1390I CCNGG 3 cut(s) 86, 671, 1950
Bme18I GGWCC 1 cut(s) 1602
BmeRI GACNNNNNGTC 1 cut(s) 640
BmgT120I GGNCC 2 cut(s) 381, 1602
BmiI GGNNCC 3 cut(s) 251, 1547, 1860
BmrFI CCNGG 3 cut(s) 86, 671, 1950
BmrI ACTGGG 2 cut(s) 1426, 1918
BmsI GCATC 7 cut(s) 727, 745, 887, 1189, 1507, 1816, 1996
BmuI ACTGGG 2 cut(s) 1426, 1918
BpiI GAAGAC 4 cut(s) 230, 702, 960, 1894
BpmI CTGGAG 4 cut(s) 569, 1010, 1259, 2171
Bpu10I CCTNAGC 1 cut(s) 2345
Bpu1102I GCTNAGC 1 cut(s) 2193
Bpu14I TTCGAA 1 cut(s) 1552
BpuEI CTTGAG 3 cut(s) 1781, 1952, 2082
BpuMI CCSGG 2 cut(s) 671, 1950
Bsa29I ATCGAT 2 cut(s) 39, 2377
BsaBI GATNNNNATC 1 cut(s) 2373
BsaHI GRCGYC 2 cut(s) 48, 636
BsaI GGTCTC 2 cut(s) 473, 1581
BsaJI CCNNGG 2 cut(s) 895, 1949
BsaWI WCCGGW 1 cut(s) 2161
BsaXI ACNNNNNCTCC 4 cut(s) 1621, 1651, 2106, 2136
Bsc4I CCNNNNNNNGG 8 cut(s) 58, 85, 928, 978, 1308, 1828, 2326, 2350
Bse1I ACTGG 6 cut(s) 552, 1242, 1421, 1694, 1913, 2154
Bse3DI GCAATG 2 cut(s) 1338, 2208
Bse8I GATNNNNATC 1 cut(s) 2373
BseBI CCWGG 1 cut(s) 86
BseCI ATCGAT 2 cut(s) 39, 2377
BseDI CCNNGG 2 cut(s) 895, 1949
BseGI GGATG 8 cut(s) 592, 684, 836, 895, 1213, 1317, 1352, 2011
BseJI GATNNNNATC 1 cut(s) 2373
BseLI CCNNNNNNNGG 8 cut(s) 58, 85, 928, 978, 1308, 1828, 2326, 2350
BseMI GCAATG 2 cut(s) 1338, 2208
BseMII CTCAG 2 cut(s) 2126, 2207
BseNI ACTGG 6 cut(s) 552, 1242, 1421, 1694, 1913, 2154
BseRI GAGGAG 1 cut(s) 1076
BseXI GCAGC 7 cut(s) 170, 548, 647, 905, 1164, 1668, 2274
BsgI GTGCAG 1 cut(s) 2384
Bsh1236I CGCG 1 cut(s) 1369
Bsh1285I CGRYCG 2 cut(s) 43, 2377
BshFI GGCC 6 cut(s) 122, 383, 782, 894, 937, 2343
BshVI ATCGAT 2 cut(s) 39, 2377
BsiEI CGRYCG 2 cut(s) 43, 2377
BsiHKAI GWGCWC 2 cut(s) 270, 502
BsiSI CCGG 4 cut(s) 671, 1280, 1949, 2162
BslFI GGGAC 3 cut(s) 541, 872, 1925
BslI CCNNNNNNNGG 8 cut(s) 58, 85, 928, 978, 1308, 1828, 2326, 2350
BsmAI GTCTC 5 cut(s) 243, 473, 1581, 2029, 2261
BsmFI GGGAC 3 cut(s) 541, 872, 1925
BsmI GAATGC 4 cut(s) 464, 846, 1529, 2321
BsnI GGCC 6 cut(s) 122, 383, 782, 894, 937, 2343
Bso31I GGTCTC 2 cut(s) 473, 1581
Bsp119I TTCGAA 1 cut(s) 1552
Bsp1286I GDGCHC 2 cut(s) 270, 502
Bsp1720I GCTNAGC 1 cut(s) 2193
BspACI CCGC 5 cut(s) 462, 963, 1369, 2003, 2032
BspANI GGCC 6 cut(s) 122, 383, 782, 894, 937, 2343
BspCNI CTCAG 2 cut(s) 2127, 2206
BspDI ATCGAT 2 cut(s) 39, 2377
BspFNI CGCG 1 cut(s) 1369
BspLI GGNNCC 3 cut(s) 251, 1547, 1860
BspPI GGATC 6 cut(s) 190, 244, 257, 1060, 1326, 2180
BspQI GCTCTTC 2 cut(s) 326, 2292
BspT104I TTCGAA 1 cut(s) 1552
BspTNI GGTCTC 2 cut(s) 473, 1581
BsrDI GCAATG 2 cut(s) 1338, 2208
BsrI ACTGG 6 cut(s) 552, 1242, 1421, 1694, 1913, 2154
BssECI CCNNGG 2 cut(s) 895, 1949
BssNI GRCGYC 2 cut(s) 48, 636
BssT1I CCWWGG 1 cut(s) 895
Bst2UI CCWGG 1 cut(s) 86
Bst4CI ACNGT 6 cut(s) 1044, 1705, 1775, 1849, 1926, 2122
Bst6I CTCTTC 4 cut(s) 326, 1884, 2264, 2292
BstACI GRCGYC 2 cut(s) 48, 636
BstBI TTCGAA 1 cut(s) 1552
BstC8I GCNNGC 6 cut(s) 14, 108, 120, 916, 1919, 2199
BstDEI CTNAG 6 cut(s) 517, 1247, 2135, 2193, 2216, 2345
BstENI CCTNNNNNAGG 1 cut(s) 2348
BstF5I GGATG 8 cut(s) 592, 684, 836, 895, 1213, 1317, 1352, 2011
BstFNI CGCG 1 cut(s) 1369
BstMAI GTCTC 5 cut(s) 243, 473, 1581, 2029, 2261
BstMCI CGRYCG 2 cut(s) 43, 2377
BstMWI GCNNNNNNNGC 5 cut(s) 158, 485, 1174, 1954, 2198
BstNI CCWGG 1 cut(s) 86
BstNSI RCATGY 3 cut(s) 409, 1399, 1901
BstSCI CCNGG 3 cut(s) 84, 669, 1948
BstSFI CTRYAG 1 cut(s) 1040
BstUI CGCG 1 cut(s) 1369
BstV1I GCAGC 7 cut(s) 170, 548, 647, 905, 1164, 1668, 2274
BstV2I GAAGAC 4 cut(s) 230, 702, 960, 1894
BstX2I RGATCY 6 cut(s) 195, 249, 1065, 1318, 1971, 2093
BstYI RGATCY 6 cut(s) 195, 249, 1065, 1318, 1971, 2093
Bsu15I ATCGAT 2 cut(s) 39, 2377
BsuRI GGCC 6 cut(s) 122, 383, 782, 894, 937, 2343
BsuTUI ATCGAT 2 cut(s) 39, 2377
BtsCI GGATG 8 cut(s) 592, 684, 836, 895, 1213, 1317, 1352, 2011
BtsI GCAGTG 1 cut(s) 1994
BtsIMutI CAGTG 1 cut(s) 1994
Cac8I GCNNGC 6 cut(s) 14, 108, 120, 916, 1919, 2199
Cfr13I GGNCC 2 cut(s) 381, 1602
ClaI ATCGAT 2 cut(s) 39, 2377
CpoI CGGWCCG 1 cut(s) 1602
CseI GACGC 1 cut(s) 644
CsiI ACCWGGT 1 cut(s) 84
Csp6I GTAC 5 cut(s) 787, 1122, 1332, 1771, 2054
CspI CGGWCCG 1 cut(s) 1602
CviQI GTAC 5 cut(s) 787, 1122, 1332, 1771, 2054
DdeI CTNAG 6 cut(s) 517, 1247, 2135, 2193, 2216, 2345
DrdI GACNNNNNNGTC 1 cut(s) 1763
DriI GACNNNNNGTC 1 cut(s) 640
DseDI GACNNNNNNGTC 1 cut(s) 1763
EaeI YGGCCR 3 cut(s) 780, 892, 935
Eam1104I CTCTTC 4 cut(s) 326, 1884, 2264, 2292
Eam1105I GACNNNNNGTC 1 cut(s) 640
EarI CTCTTC 4 cut(s) 326, 1884, 2264, 2292
EciI GGCGGA 1 cut(s) 2018
Ecl136II GAGCTC 1 cut(s) 268
Eco130I CCWWGG 1 cut(s) 895
Eco24I GRGCYC 1 cut(s) 270
Eco31I GGTCTC 2 cut(s) 473, 1581
Eco32I GATATC 2 cut(s) 358, 1365
Eco47I GGWCC 1 cut(s) 1602
Eco53kI GAGCTC 1 cut(s) 268
Eco57I CTGAAG 1 cut(s) 725
EcoICRI GAGCTC 1 cut(s) 268
EcoNI CCTNNNNNAGG 1 cut(s) 2348
EcoRI GAATTC 2 cut(s) 943, 2220
EcoRII CCWGG 1 cut(s) 84
EcoRV GATATC 2 cut(s) 358, 1365
EcoT14I CCWWGG 1 cut(s) 895
EcoT22I ATGCAT 2 cut(s) 846, 1099
EcoT38I GRGCYC 1 cut(s) 270
ErhI CCWWGG 1 cut(s) 895
FalI AAGNNNNNCTT 2 cut(s) 632, 664
FaqI GGGAC 3 cut(s) 541, 872, 1925
FauNDI CATATG 1 cut(s) 2177
Fnu4HI GCNGC 8 cut(s) 159, 537, 661, 919, 1178, 1370, 1682, 2288
FokI GGATG 8 cut(s) 599, 671, 843, 902, 1220, 1324, 1339, 2018
FriOI GRGCYC 1 cut(s) 270
Fsp4HI GCNGC 8 cut(s) 159, 537, 661, 919, 1178, 1370, 1682, 2288
FspBI CTAG 6 cut(s) 162, 453, 1184, 1458, 1743, 1854
GluI GCNGC 8 cut(s) 159, 537, 661, 919, 1178, 1370, 1682, 2288
GsuI CTGGAG 4 cut(s) 569, 1010, 1259, 2171
HaeIII GGCC 6 cut(s) 122, 383, 782, 894, 937, 2343
HapII CCGG 4 cut(s) 671, 1280, 1949, 2162
HgaI GACGC 1 cut(s) 644
Hin1I GRCGYC 2 cut(s) 48, 636
HincII GTYRAC 1 cut(s) 1507
HindII GTYRAC 1 cut(s) 1507
HindIII AAGCTT 1 cut(s) 795
HinfI GANTC 9 cut(s) 94, 346, 374, 677, 853, 1259, 1794, 2155, 2369
HpaII CCGG 4 cut(s) 671, 1280, 1949, 2162
HphI GGTGA 3 cut(s) 289, 830, 1949
Hpy166II GTNNAC 3 cut(s) 821, 1507, 2311
Hpy188I TCNGA 8 cut(s) 506, 682, 1223, 1516, 1533, 2093, 2226, 2374
Hpy8I GTNNAC 3 cut(s) 821, 1507, 2311
Hpy99I CGWCG 1 cut(s) 546
HpyAV CCTTC 8 cut(s) 163, 439, 619, 1427, 1495, 1538, 1559, 1988
HpyCH4III ACNGT 6 cut(s) 1044, 1705, 1775, 1849, 1926, 2122
HpyCH4IV ACGT 1 cut(s) 48
HpyF10VI GCNNNNNNNGC 5 cut(s) 158, 485, 1174, 1954, 2198
HpyF3I CTNAG 6 cut(s) 517, 1247, 2135, 2193, 2216, 2345
HpySE526I ACGT 1 cut(s) 48
Hsp92I GRCGYC 2 cut(s) 48, 636
LguI GCTCTTC 2 cut(s) 326, 2292
LmnI GCTCC 4 cut(s) 273, 1173, 1984, 2069
Lsp1109I GCAGC 7 cut(s) 170, 548, 647, 905, 1164, 1668, 2274
LweI GCATC 7 cut(s) 727, 745, 887, 1189, 1507, 1816, 1996
MabI ACCWGGT 1 cut(s) 84
MaeI CTAG 6 cut(s) 162, 453, 1184, 1458, 1743, 1854
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 6 cut(s) 44, 1484, 1705, 1785, 1831, 1849
MfeI CAATTG 2 cut(s) 474, 2291
MflI RGATCY 6 cut(s) 195, 249, 1065, 1318, 1971, 2093
MhlI GDGCHC 2 cut(s) 270, 502
MlsI TGGCCA 2 cut(s) 894, 937
MluNI TGGCCA 2 cut(s) 894, 937
MlyI GAGTC 2 cut(s) 671, 1788
MmeI TCCRAC 1 cut(s) 1296
Mox20I TGGCCA 2 cut(s) 894, 937
Mph1103I ATGCAT 2 cut(s) 846, 1099
MroXI GAANNNNTTC 1 cut(s) 1527
MscI TGGCCA 2 cut(s) 894, 937
Msp20I TGGCCA 2 cut(s) 894, 937
MspI CCGG 4 cut(s) 671, 1280, 1949, 2162
MspR9I CCNGG 3 cut(s) 86, 671, 1950
MunI CAATTG 2 cut(s) 474, 2291
Mva1269I GAATGC 4 cut(s) 464, 846, 1529, 2321
MvaI CCWGG 1 cut(s) 86
MvnI CGCG 1 cut(s) 1369
MwoI GCNNNNNNNGC 5 cut(s) 158, 485, 1174, 1954, 2198
NciI CCSGG 2 cut(s) 671, 1950
NdeI CATATG 1 cut(s) 2177
NlaIV GGNNCC 3 cut(s) 251, 1547, 1860
NmeAIII GCCGAG 1 cut(s) 808
NmuCI GTSAC 1 cut(s) 44
NsiI ATGCAT 2 cut(s) 846, 1099
NspI RCATGY 3 cut(s) 409, 1399, 1901
NspV TTCGAA 1 cut(s) 1552
PciSI GCTCTTC 2 cut(s) 326, 2292
PcsI WCGNNNNNNNCGW 2 cut(s) 45, 2346
PctI GAATGC 4 cut(s) 464, 846, 1529, 2321
PdmI GAANNNNTTC 1 cut(s) 1527
PfeI GAWTC 7 cut(s) 94, 346, 374, 853, 1259, 2155, 2369
PflMI CCANNNNNTGG 2 cut(s) 58, 2326
PfoI TCCNGGA 1 cut(s) 669
PkrI GCNGC 8 cut(s) 160, 538, 662, 920, 1179, 1371, 1683, 2289
Ple19I CGATCG 2 cut(s) 43, 2377
PleI GAGTC 2 cut(s) 671, 1788
PpsI GAGTC 2 cut(s) 671, 1788
PshBI ATTAAT 1 cut(s) 2357
PsiI TTATAA 1 cut(s) 203
Psp124BI GAGCTC 1 cut(s) 270
Psp6I CCWGG 1 cut(s) 84
PspGI CCWGG 1 cut(s) 84
PspN4I GGNNCC 3 cut(s) 251, 1547, 1860
PspPI GGNCC 2 cut(s) 381, 1602
PsrI GAACNNNNNNTAC 2 cut(s) 1842, 1874
PsuI RGATCY 6 cut(s) 195, 249, 1065, 1318, 1971, 2093
PvuI CGATCG 2 cut(s) 43, 2377
RsaI GTAC 5 cut(s) 788, 1123, 1333, 1772, 2055
RsaNI GTAC 5 cut(s) 787, 1122, 1332, 1771, 2054
Rsr2I CGGWCCG 1 cut(s) 1602
RsrII CGGWCCG 1 cut(s) 1602
SacI GAGCTC 1 cut(s) 270
SapI GCTCTTC 2 cut(s) 326, 2292
SatI GCNGC 8 cut(s) 159, 537, 661, 919, 1178, 1370, 1682, 2288
Sau96I GGNCC 2 cut(s) 381, 1602
ScaI AGTACT 1 cut(s) 2055
SchI GAGTC 2 cut(s) 671, 1788
ScrFI CCNGG 3 cut(s) 86, 671, 1950
SduI GDGCHC 2 cut(s) 270, 502
SexAI ACCWGGT 1 cut(s) 84
SfaNI GCATC 7 cut(s) 727, 745, 887, 1189, 1507, 1816, 1996
SfcI CTRYAG 1 cut(s) 1040
SfuI TTCGAA 1 cut(s) 1552
SinI GGWCC 1 cut(s) 1602
SmlI CTYRAG 3 cut(s) 1796, 1967, 2097
SmoI CTYRAG 3 cut(s) 1796, 1967, 2097
SsiI CCGC 5 cut(s) 462, 963, 1369, 2003, 2032
SspMI CTAG 6 cut(s) 162, 453, 1184, 1458, 1743, 1854
SstI GAGCTC 1 cut(s) 270
StyD4I CCNGG 3 cut(s) 84, 669, 1948
StyI CCWWGG 1 cut(s) 895
TaaI ACNGT 6 cut(s) 1044, 1705, 1775, 1849, 1926, 2122
TaiI ACGT 1 cut(s) 51
TaqII GACCGA 1 cut(s) 1590
TatI WGTACW 1 cut(s) 2053
TauI GCSGC 1 cut(s) 1372
TfiI GAWTC 7 cut(s) 94, 346, 374, 853, 1259, 2155, 2369
TscAI CASTG 1 cut(s) 1994
TseFI GTSAC 1 cut(s) 44
TseI GCWGC 7 cut(s) 158, 536, 660, 918, 1177, 1681, 2287
Tsp45I GTSAC 1 cut(s) 44
TspDTI ATGAA 7 cut(s) 338, 344, 956, 1125, 1856, 2159, 2198
TspGWI ACGGA 3 cut(s) 843, 1594, 1724
TspRI CASTG 1 cut(s) 1994
Van91I CCANNNNNTGG 2 cut(s) 58, 2326
VpaK11BI GGWCC 1 cut(s) 1602
VspI ATTAAT 1 cut(s) 2357
XagI CCTNNNNNAGG 1 cut(s) 2348
XapI RAATTY 6 cut(s) 127, 943, 1048, 1128, 1564, 2220
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 3 cut(s) 409, 1399, 1901
XmnI GAANNNNTTC 1 cut(s) 1527
XspI CTAG 6 cut(s) 162, 453, 1184, 1458, 1743, 1854
ZraI GACGTC 1 cut(s) 49
ZrmI AGTACT 1 cut(s) 2055
Zsp2I ATGCAT 2 cut(s) 846, 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.