Rorug06G0084400

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000085
Physical Location & Seq
Forward (+)
11182415 .. 11184328
1914 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0084400.1

Sequence Viewer

Length: 1284 bp
ATGAGCACAGAGAATGATCGGAACCGCCAAACCGCCGCAACCAGCAACGCCACCGCAATTCCTTACTTACCTGACAACGTCATCGAAAAAATCCTGTCCTTCCTTCCGATCAATCTAGCGGCCCAGGCGAACACCGTCTCGAAGCAATGGGCAGCCCTGTGGCCTTCGTTCCCTGTAATCGATCTCGACGAGGCCGATCCGATCAATTGCGAACTCTATATCGAACCTGGACGTTTCCTTAGCTTCTTGCACCATTCTCTCAGACGATGCGGGGATCAGAGGCGCTTGGACAAGTTGAGGATTCGAGCCAACCTTCGATACGCCTACGTGTTGGTAACAGAGTGGATTGATTTTGCAATTGATAGTTTGAATTTGGAGAATGTGAGAGTTTATGCAAGTTCTGGGCTTAACGGTCCAGTTTGCCTACCCTTATTGAAAACTATGTCCCTTACAGAGGTAGAATTTTTCGACGATGAGGAGGACTGGGCCATTTGCGCTGTCCCCAGCTTAATTTCGGGGTGTCCTAGCATGGAGCAATTGTCAATTAAGAAATGTAAGCTTGGCTACTCTACCATGGAGCTTGAAATTTCAAGTTACAGTCTCAAATCCTTGGAAATTATGCATTGCCATTGTATGAATTTGTCAGTTTCCGCCAAGAATCTCGAGTCTTTTACATTCTATTCGGATTGTACCTGTCCTAACCATAACACTATGTACTTGTGGGACTGTAATAACTTGAAACATGTGGACATCTCTTGTTTGGTGTTGAAACAGCTTCTACTGCATACATGCCTAGAAACTATGGAGAACTCGTTTCACACTCCAAATCTAGAGTCGTTTGAATTTAGTGGATATCTGAAGACCAAGGTCCATTTTGTGGATGCTCCATCAAAGTTATTAAAAGCTACAATCAGAGTTTGGGAGGCTTCCTGGCACATTGAATTTTATTCTGCTATGAGAGATTTTCTTGAAAGTTTCAATTGCTCCAAGAAAGTGAAGCTACATATTGAGGATGCTGAGGGTGTCATAATACCAGAACATCGGAGAATGGAATGGTACCCCCCATTACCTAGTATTAAGCAGCTGCAGCTATACTTTTATGCTCCATTGGATGGCAGAGAATATTGTTTGAGACCTTCGTTGATTTGGATGGCACCATCTGCTGAGATTCTACCATTTCTACATAATAATGATGATGATACTGAGTATGATGATGATGACGATGATGATGAGTATGATGATGATGACGATGATGATGATGATGATGACCACAACGAAGACTAG

Protein Analysis

427

Amino Acids

49.27

Weight (kDa)

4.58

Isoelectric Point (pI)

55.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 123 - 235 9.9e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1056
AccB1I GGYRCC 2 cut(s) 1056, 1153
AccB7I CCANNNNNTGG 2 cut(s) 877, 1112
AciI CCGC 7 cut(s) 25, 33, 36, 54, 119, 270, 651
AclWI GGATC 2 cut(s) 191, 282
AcsI RAATTY 6 cut(s) 370, 461, 585, 637, 842, 941
AcuI CTGAAG 1 cut(s) 878
AfaI GTAC 3 cut(s) 691, 716, 1058
AfiI CCNNNNNNNGG 3 cut(s) 454, 877, 1112
AflIII ACRYGT 2 cut(s) 327, 742
AjnI CCWGG 3 cut(s) 123, 226, 929
AluBI AGCT 9 cut(s) 243, 507, 559, 580, 775, 905, 1000, 1084, 1090
AluI AGCT 9 cut(s) 243, 507, 559, 580, 775, 905, 1000, 1084, 1090
Alw21I GWGCWC 1 cut(s) 8
Alw26I GTCTC 3 cut(s) 142, 605, 1126
AlwI GGATC 2 cut(s) 191, 282
Ama87I CYCGRG 1 cut(s) 662
AoxI GGCC 4 cut(s) 120, 161, 192, 486
ApeKI GCWGC 4 cut(s) 152, 1081, 1084, 1087
ApoI RAATTY 6 cut(s) 370, 461, 585, 637, 842, 941
ArsI GACNNNNNNTTYG 2 cut(s) 818, 850
Asp718I GGTACC 1 cut(s) 1056
AspLEI GCGC 2 cut(s) 285, 497
AspS9I GGNCC 4 cut(s) 121, 413, 486, 868
AvaI CYCGRG 1 cut(s) 662
AvaII GGWCC 2 cut(s) 413, 868
BanI GGYRCC 2 cut(s) 1056, 1153
BbsI GAAGAC 1 cut(s) 866
Bbv12I GWGCWC 1 cut(s) 8
BbvCI CCTCAGC 1 cut(s) 1017
BbvI GCAGC 4 cut(s) 164, 1071, 1093, 1099
BccI CCATC 4 cut(s) 895, 1106, 1144, 1165
BciT130I CCWGG 3 cut(s) 125, 228, 931
BcoDI GTCTC 3 cut(s) 142, 605, 1126
BfaI CTAG 6 cut(s) 116, 525, 794, 830, 1071, 1282
BfmI CTRYAG 1 cut(s) 1085
BfoI RGCGCY 1 cut(s) 286
BisI GCNGC 6 cut(s) 36, 120, 153, 1082, 1085, 1088
BlsI GCNGC 6 cut(s) 37, 121, 154, 1083, 1086, 1089
Bme1390I CCNGG 3 cut(s) 125, 228, 931
Bme18I GGWCC 2 cut(s) 413, 868
BmeT110I CYCGRG 1 cut(s) 662
BmgT120I GGNCC 4 cut(s) 121, 413, 486, 868
BmiI GGNNCC 3 cut(s) 23, 1058, 1155
BmrFI CCNGG 3 cut(s) 125, 228, 931
BmrI ACTGGG 1 cut(s) 493
BmsI GCATC 3 cut(s) 257, 871, 1003
BmuI ACTGGG 1 cut(s) 493
BoxI GACNNNNGTC 1 cut(s) 866
BpiI GAAGAC 1 cut(s) 866
Bpu10I CCTNAGC 2 cut(s) 239, 1017
Bsa29I ATCGAT 1 cut(s) 180
BsaAI YACGTR 1 cut(s) 328
BsaI GGTCTC 1 cut(s) 1126
BsaJI CCNNGG 4 cut(s) 123, 573, 609, 864
BsaXI ACNNNNNCTCC 4 cut(s) 524, 554, 797, 827
Bsc4I CCNNNNNNNGG 3 cut(s) 454, 877, 1112
Bse1I ACTGG 2 cut(s) 416, 488
Bse3DI GCAATG 2 cut(s) 152, 622
BseBI CCWGG 3 cut(s) 125, 228, 931
BseCI ATCGAT 1 cut(s) 180
BseDI CCNNGG 4 cut(s) 123, 573, 609, 864
BseGI GGATG 4 cut(s) 886, 1018, 1117, 1155
BseLI CCNNNNNNNGG 3 cut(s) 454, 877, 1112
BseMI GCAATG 2 cut(s) 152, 622
BseMII CTCAG 4 cut(s) 274, 1008, 1155, 1194
BseNI ACTGG 2 cut(s) 416, 488
BseRI GAGGAG 1 cut(s) 491
BseXI GCAGC 4 cut(s) 164, 1071, 1093, 1099
BseYI CCCAGC 1 cut(s) 503
BshFI GGCC 4 cut(s) 122, 163, 194, 488
BshNI GGYRCC 2 cut(s) 1056, 1153
BshVI ATCGAT 1 cut(s) 180
BsiHKAI GWGCWC 1 cut(s) 8
BsiHKCI CYCGRG 1 cut(s) 662
BslFI GGGAC 3 cut(s) 430, 485, 737
BslI CCNNNNNNNGG 3 cut(s) 454, 877, 1112
BsmAI GTCTC 3 cut(s) 142, 605, 1126
BsmBI CGTCTC 1 cut(s) 142
BsmFI GGGAC 3 cut(s) 430, 485, 737
BsnI GGCC 4 cut(s) 122, 163, 194, 488
Bso31I GGTCTC 1 cut(s) 1126
BsoBI CYCGRG 1 cut(s) 662
Bsp1286I GDGCHC 1 cut(s) 8
Bsp143I GATC 6 cut(s) 16, 108, 181, 196, 201, 274
Bsp19I CCATGG 1 cut(s) 573
BspACI CCGC 7 cut(s) 25, 33, 36, 54, 119, 270, 651
BspANI GGCC 4 cut(s) 122, 163, 194, 488
BspCNI CTCAG 4 cut(s) 273, 1009, 1156, 1195
BspDI ATCGAT 1 cut(s) 180
BspLI GGNNCC 3 cut(s) 23, 1058, 1155
BspMAI CTGCAG 1 cut(s) 1089
BspPI GGATC 2 cut(s) 191, 282
BspT107I GGYRCC 2 cut(s) 1056, 1153
BspTNI GGTCTC 1 cut(s) 1126
BsrDI GCAATG 2 cut(s) 152, 622
BsrI ACTGG 2 cut(s) 416, 488
BssECI CCNNGG 4 cut(s) 123, 573, 609, 864
BssMI GATC 6 cut(s) 16, 108, 181, 196, 201, 274
BssT1I CCWWGG 3 cut(s) 573, 609, 864
Bst2UI CCWGG 3 cut(s) 125, 228, 931
Bst4CI ACNGT 4 cut(s) 136, 413, 599, 728
BstAPI GCANNNNNTGC 1 cut(s) 1160
BstBAI YACGTR 1 cut(s) 328
BstDEI CTNAG 5 cut(s) 239, 260, 1017, 1164, 1203
BstDSI CCRYGG 1 cut(s) 573
BstENI CCTNNNNNAGG 1 cut(s) 452
BstF5I GGATG 4 cut(s) 886, 1018, 1117, 1155
BstH2I RGCGCY 1 cut(s) 286
BstHHI GCGC 2 cut(s) 285, 497
BstKTI GATC 6 cut(s) 19, 111, 184, 199, 204, 277
BstMAI GTCTC 3 cut(s) 142, 605, 1126
BstMBI GATC 6 cut(s) 16, 108, 181, 196, 201, 274
BstMWI GCNNNNNNNGC 5 cut(s) 125, 494, 781, 1087, 1160
BstNI CCWGG 3 cut(s) 125, 228, 931
BstNSI RCATGY 2 cut(s) 746, 792
BstPAI GACNNNNGTC 1 cut(s) 866
BstSCI CCNGG 3 cut(s) 123, 226, 929
BstSFI CTRYAG 1 cut(s) 1085
BstV1I GCAGC 4 cut(s) 164, 1071, 1093, 1099
BstV2I GAAGAC 1 cut(s) 866
Bsu15I ATCGAT 1 cut(s) 180
BsuRI GGCC 4 cut(s) 122, 163, 194, 488
BsuTUI ATCGAT 1 cut(s) 180
BtgI CCRYGG 1 cut(s) 573
BtsCI GGATG 4 cut(s) 886, 1018, 1117, 1155
CfoI GCGC 2 cut(s) 285, 497
Cfr13I GGNCC 4 cut(s) 121, 413, 486, 868
ClaI ATCGAT 1 cut(s) 180
Csp6I GTAC 3 cut(s) 690, 715, 1057
CviAII CATG 4 cut(s) 529, 574, 743, 789
CviQI GTAC 3 cut(s) 690, 715, 1057
DdeI CTNAG 5 cut(s) 239, 260, 1017, 1164, 1203
DpnI GATC 6 cut(s) 18, 110, 183, 198, 203, 276
DpnII GATC 6 cut(s) 16, 108, 181, 196, 201, 274
EciI GGCGGA 1 cut(s) 640
Eco130I CCWWGG 3 cut(s) 573, 609, 864
Eco31I GGTCTC 1 cut(s) 1126
Eco32I GATATC 1 cut(s) 854
Eco47I GGWCC 2 cut(s) 413, 868
Eco57I CTGAAG 1 cut(s) 878
Eco88I CYCGRG 1 cut(s) 662
EcoNI CCTNNNNNAGG 1 cut(s) 452
EcoRII CCWGG 3 cut(s) 123, 226, 929
EcoRV GATATC 1 cut(s) 854
EcoT14I CCWWGG 3 cut(s) 573, 609, 864
EcoT22I ATGCAT 1 cut(s) 624
ErhI CCWWGG 3 cut(s) 573, 609, 864
Esp3I CGTCTC 1 cut(s) 142
FaeI CATG 4 cut(s) 532, 577, 746, 792
FaqI GGGAC 3 cut(s) 430, 485, 737
FatI CATG 4 cut(s) 528, 573, 742, 788
FauI CCCGC 1 cut(s) 263
Fnu4HI GCNGC 6 cut(s) 36, 120, 153, 1082, 1085, 1088
FokI GGATG 4 cut(s) 893, 1025, 1124, 1162
Fsp4HI GCNGC 6 cut(s) 36, 120, 153, 1082, 1085, 1088
FspBI CTAG 6 cut(s) 116, 525, 794, 830, 1071, 1282
GlaI GCGC 2 cut(s) 284, 496
GluI GCNGC 6 cut(s) 36, 120, 153, 1082, 1085, 1088
GsaI CCCAGC 1 cut(s) 507
HaeII RGCGCY 1 cut(s) 286
HaeIII GGCC 4 cut(s) 122, 163, 194, 488
HhaI GCGC 2 cut(s) 285, 497
Hin1II CATG 4 cut(s) 532, 577, 746, 792
Hin6I GCGC 2 cut(s) 283, 495
HinP1I GCGC 2 cut(s) 283, 495
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 5 cut(s) 301, 658, 665, 833, 1168
Hpy166II GTNNAC 1 cut(s) 748
Hpy188I TCNGA 9 cut(s) 21, 108, 201, 263, 279, 685, 858, 914, 1044
Hpy188III TCNNGA 5 cut(s) 139, 185, 662, 830, 968
Hpy8I GTNNAC 1 cut(s) 748
Hpy99I CGWCG 2 cut(s) 191, 473
HpyAV CCTTC 5 cut(s) 109, 113, 174, 323, 1146
HpyCH4III ACNGT 4 cut(s) 136, 413, 599, 728
HpyCH4IV ACGT 3 cut(s) 78, 232, 327
HpyCH4V TGCA 6 cut(s) 250, 356, 395, 622, 784, 1087
HpyF10VI GCNNNNNNNGC 5 cut(s) 125, 494, 781, 1087, 1160
HpyF3I CTNAG 5 cut(s) 239, 260, 1017, 1164, 1203
HpySE526I ACGT 3 cut(s) 78, 232, 327
Hsp92II CATG 4 cut(s) 532, 577, 746, 792
HspAI GCGC 2 cut(s) 283, 495
KpnI GGTACC 1 cut(s) 1060
Kzo9I GATC 6 cut(s) 16, 108, 181, 196, 201, 274
LmnI GCTCC 5 cut(s) 532, 577, 889, 989, 1108
Lsp1109I GCAGC 4 cut(s) 164, 1071, 1093, 1099
LweI GCATC 3 cut(s) 257, 871, 1003
MaeI CTAG 6 cut(s) 116, 525, 794, 830, 1071, 1282
MaeII ACGT 3 cut(s) 78, 232, 327
MaeIII GTNAC 2 cut(s) 334, 593
MalI GATC 6 cut(s) 18, 110, 183, 198, 203, 276
MboI GATC 6 cut(s) 16, 108, 181, 196, 201, 274
MboII GAAGA 1 cut(s) 871
MfeI CAATTG 4 cut(s) 205, 357, 536, 979
MhlI GDGCHC 1 cut(s) 8
MlyI GAGTC 2 cut(s) 674, 842
MnlI CCTC 9 cut(s) 184, 273, 291, 448, 469, 472, 916, 1003, 1012
Mph1103I ATGCAT 1 cut(s) 624
MseI TTAA 5 cut(s) 408, 509, 546, 899, 1077
MslI CAYNNNNRTG 1 cut(s) 1188
MspA1I CMGCKG 1 cut(s) 1084
MspR9I CCNGG 3 cut(s) 125, 228, 931
MunI CAATTG 4 cut(s) 205, 357, 536, 979
MvaI CCWGG 3 cut(s) 125, 228, 931
MwoI GCNNNNNNNGC 5 cut(s) 125, 494, 781, 1087, 1160
NcoI CCATGG 1 cut(s) 573
NdeII GATC 6 cut(s) 16, 108, 181, 196, 201, 274
NlaIII CATG 4 cut(s) 532, 577, 746, 792
NlaIV GGNNCC 3 cut(s) 23, 1058, 1155
NsiI ATGCAT 1 cut(s) 624
NspI RCATGY 2 cut(s) 746, 792
PaeR7I CTCGAG 1 cut(s) 662
PciI ACATGT 1 cut(s) 742
PcsI WCGNNNNNNNCGW 2 cut(s) 186, 192
PfeI GAWTC 3 cut(s) 301, 658, 1168
PflFI GACNNNGTC 1 cut(s) 77
PflMI CCANNNNNTGG 2 cut(s) 877, 1112
PkrI GCNGC 6 cut(s) 37, 121, 154, 1083, 1086, 1089
PleI GAGTC 2 cut(s) 673, 841
PpsI GAGTC 2 cut(s) 673, 841
Ppu21I YACGTR 1 cut(s) 328
PscI ACATGT 1 cut(s) 742
PshAI GACNNNNGTC 1 cut(s) 866
Psp6I CCWGG 3 cut(s) 123, 226, 929
PspFI CCCAGC 1 cut(s) 503
PspGI CCWGG 3 cut(s) 123, 226, 929
PspN4I GGNNCC 3 cut(s) 23, 1058, 1155
PspPI GGNCC 4 cut(s) 121, 413, 486, 868
PstI CTGCAG 1 cut(s) 1089
PsyI GACNNNGTC 1 cut(s) 77
PvuII CAGCTG 1 cut(s) 1084
RsaI GTAC 3 cut(s) 691, 716, 1058
RsaNI GTAC 3 cut(s) 690, 715, 1057
RseI CAYNNNNRTG 1 cut(s) 1188
SaqAI TTAA 5 cut(s) 408, 509, 546, 899, 1077
SatI GCNGC 6 cut(s) 36, 120, 153, 1082, 1085, 1088
Sau3AI GATC 6 cut(s) 16, 108, 181, 196, 201, 274
Sau96I GGNCC 4 cut(s) 121, 413, 486, 868
SchI GAGTC 2 cut(s) 674, 842
ScrFI CCNGG 3 cut(s) 125, 228, 931
SduI GDGCHC 1 cut(s) 8
SfaNI GCATC 3 cut(s) 257, 871, 1003
SfcI CTRYAG 1 cut(s) 1085
Sfr274I CTCGAG 1 cut(s) 662
SinI GGWCC 2 cut(s) 413, 868
SlaI CTCGAG 1 cut(s) 662
SmiMI CAYNNNNRTG 1 cut(s) 1188
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
SsiI CCGC 7 cut(s) 25, 33, 36, 54, 119, 270, 651
SspI AATATT 1 cut(s) 1124
SspMI CTAG 6 cut(s) 116, 525, 794, 830, 1071, 1282
StyD4I CCNGG 3 cut(s) 123, 226, 929
StyI CCWWGG 3 cut(s) 573, 609, 864
TaaI ACNGT 4 cut(s) 136, 413, 599, 728
TaiI ACGT 3 cut(s) 81, 235, 330
TaqI TCGA 9 cut(s) 84, 140, 180, 186, 222, 304, 316, 468, 663
TatI WGTACW 1 cut(s) 714
TauI GCSGC 2 cut(s) 38, 122
TfiI GAWTC 3 cut(s) 301, 658, 1168
Tru1I TTAA 5 cut(s) 408, 509, 546, 899, 1077
Tru9I TTAA 5 cut(s) 408, 509, 546, 899, 1077
TseI GCWGC 4 cut(s) 152, 1081, 1084, 1087
TspDTI ATGAA 1 cut(s) 650
Tth111I GACNNNGTC 1 cut(s) 77
Van91I CCANNNNNTGG 2 cut(s) 877, 1112
VpaK11BI GGWCC 2 cut(s) 413, 868
XagI CCTNNNNNAGG 1 cut(s) 452
XapI RAATTY 6 cut(s) 370, 461, 585, 637, 842, 941
XbaI TCTAGA 1 cut(s) 829
XceI RCATGY 2 cut(s) 746, 792
XhoI CTCGAG 1 cut(s) 662
XspI CTAG 6 cut(s) 116, 525, 794, 830, 1071, 1282
Zsp2I ATGCAT 1 cut(s) 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.