Rmu_sc0002187.1_g000042

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002187.1
OG0000085
Physical Location & Seq
Reverse (-)
161315 .. 168728
7414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002187.1_g000042.1.cds

Sequence Viewer

Length: 3849 bp
atggctttgagctcccaaacagcctctacatctcttccttcatcatcagctcctcggttgaagcatgatgtgtttctcagttttaggggtgaagacactcgcaagggtattgtctcctatttatactatgaattccaaaacagaggaatacaaacattcatggatgaccaagggcttcagagagggatgcctatttctccaagtctcctagctgcaatagaggagtcaaggtatgcaatcgttcttctgtctccaaactatgcttcttctacatggtgtttggatgaacttgcaaagattcttcaatgctctgaagccaagaagacaccagttctgccaattttttattatgtggatccctctgatgtgcgaaatcaaagaggaagttttgcagaagccttcactaagcatgaagaaaagtttaggcaaggtaatgacaacatagagaaggtgaagaagtggagagctgctttaacaaaagtggccaatatatcagggttggatttacacaattatgggtctgaaagagaacttgtccagtgcattgtggaacttgtgtgcagtaatgtacggcctatctttatggcatcgagtggcgactttgaagcatttgaagcaacaagacaagccatgattgagctcatgaaggcattacaaactgatgaggtcactgttattggggtctatggaatgggaggggttgggaagacaaccatggtcaaacatgttggcacacatgcccaagaaaatggtctttttcatcatgtgattatggctgttgtatcccaaaaacctgacttgaaaacaatccaaggcacacttgcagatctgctgggcttgaaactggaggaggagtcagaaattggacgagccagtagattgcagaaggagatacttaaaagaaataagatctgtataatcttagacgacatatgggatagaataaatttgtcaagcataggaattcccagttacaatgagcttcagatatgcaattccaaagtcctactaaccaccaggagagtgaatgtttgtcataccatggagagccaagcaaacattcatctcagtaccttgtcagaagaagatgcttggaacttgtttgtgaagaaagcaagaaagtcttttgaaaaatccactaatttctatgatgtagcaagaaaggtagccagagaatgtgctggtctcccaattgcattgatagcagttgcgggggcacttggagataaggattttgaagaatggaaagaagcagctcgacgccttgagatgtcacaacgtgccaaccttgatcagagagatgtgttcaactgtataaagttaagctatgattacttggacggtaacgatgccaagtcttgcttcttgctttgctgcctattcccagaagattatgacattcaattggaagacttgatgatatatgggttcggaaaaggattgtttcgagatgttaacagcacaatagaaaatgcgagagtcatagcaaattcggttactaaatatcttaaagcttcttgtttgcttttggatggtacaaaggatggatgcgtaaggatgcatgatgtcattcgagatgtggctatgtcaattaccttgtctgaagatggcctcgcctctctggtaaagactcgctgtgatttaaaagattggccaacggatgcacatgatggctactcagcaatctcactaatggagagcaacatttgcaagcttcccaacaagttggtatgttcaaaacttcagattttattgctacaacggaatgctgatataagaaagatcccaaaaactttttttcaaaaacccaatgatttaagagttttagatcttagggggactaaaatttcttcactgtccccatcattcaatagtctaaccagactccaagctttgcatttagataattgctggtccatgattgacatatccatgcttagaaaactaaagaatcttgagattctaagtatgagaaactgtcatattgagaaatttccaaaagagataggaaatttgaccaatttaagaatgttggacttgactggaaatgatgttaagacagttccatctcaagtaatatcaaggttgcatagactagaagagctatatatgcaatgcaattttggtgactggggttgcaattttcttgactggggtagtaaattagcgggaggcttatgctgtgttctgcgtaagaatgctgactttgatgagttaacaggcctgtcacgtctaaagaatttggaggtttcgatatctggtgtagaatgcttccctcaaaatgtcgagttcgatccaaattgggtttactttgatatatgtatcagccgacatgagtcagccagacggccgagaatcccatctccgcaaattgactttccaaatcatcattcaagagcattgacccttaacacaaccatgaattccttaccagattggtttattgatgtggtgacagagaaaacggaggaaatatggtacacagattgttatggcttaaataacattcttgaggaacatgaccgtgggagattacatggactcaagtgtctctctatagacgttgctgggcaccaatacaactcgaaagtgttgtttaacactataacatggactagggtgtcaaatgaacctgtgtttgagaacttggaaacattgtacgtctccgtgcattgcttgaaggagttatgtgttggtgaattaccacccgggtctctgcgcaatcttaagacactgaaggtggaaattggtgacatggtgaaaccacttttaccgtcaaacttattgcagagactacagagtttggaaaaactatattgttgttttatgcataaaatggaatatgtgtttggatttgaagagcatcaaccacaagaagttatcttgaaaaacttgagagtgattttattgagatatgtgcataatctaatacacatatggaatggtcctgctccacatggaatctttaacagtctcaaaatattctacgtttctgattgccagaaactgatttatctcttcacatgtgatgtagctctatgtcttctgcaattggaagacatttgggtagagagttgttatagattggacaggctaattgaagcaagcgaggaaacagtgagccataagattatttttccactgttgaagaacttggttttgagacatcttccagaactcaaaaggttgtcctgtagttgcagtgctaccattgatattgggatcgagtgcccttcactggaacactttttcactacagcaaccaagtccaactcaatgatcaccgacatttgtacacactacaaggaagtatcttacgtccgcactttcaagactcttgacactgaatactgccaattacaagcgttagaatttgagaataccgacttgagaggcgttgtgcagagaaaagccaactttcagtgccaccaaaccctctatcaacgtacttcggtcctagtctcctcgggagccgacggtagtgccgcgaccacaacggttacggaaccagccaagcaaagaaactacagcaaagtcctcaccacgaggcacaaagaatcccgcgacgaggttggtgctctcctcgtctacaatcgctcgacagaagtcaggtcaagggacacccccaacgaccgcacccgacggtgctggcacgcccgcgcagaaaagagactgttgaccagctgcaacaaaactggagccaaacattttggcacgcccggtgggataaggttagaattttttctcttgaagacattcaaccaccgggcttcaaaacaaacattttggagtcaggtcaagggacacccccgacgaccgcacccgaacggtgctggcacgcccgcgtag

Protein Analysis

1282

Amino Acids

145.73

Weight (kDa)

7.95

Isoelectric Point (pI)

45.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 2547, 2620
Acc16I TGCGCA 1 cut(s) 2720
AccB1I GGYRCC 1 cut(s) 2571
AccI GTMKAC 1 cut(s) 3588
AccII CGCG 4 cut(s) 3488, 3564, 3660, 3845
AclWI GGATC 5 cut(s) 350, 363, 1777, 2288, 3230
AcoI YGGCCR 3 cut(s) 483, 1652, 2348
AcuI CTGAAG 6 cut(s) 161, 333, 968, 1623, 1727, 2756
AcyI GRCGYC 1 cut(s) 1261
AdeI CACNNNGTG 1 cut(s) 1280
AfaI GTAC 7 cut(s) 570, 1072, 1537, 2480, 2660, 3295, 3448
AfiI CCNNNNNNNGG 2 cut(s) 3238, 3568
AflII CTTAAG 1 cut(s) 2726
AflIII ACRYGT 2 cut(s) 724, 3023
AjiI CACGTC 1 cut(s) 2231
AjnI CCWGG 1 cut(s) 1016
Alw21I GWGCWC 3 cut(s) 14, 642, 3580
AlwI GGATC 5 cut(s) 350, 363, 1777, 2288, 3230
AlwNI CAGNNNCTG 1 cut(s) 3007
Ama87I CYCGRG 2 cut(s) 2708, 3466
AoxI GGCC 6 cut(s) 483, 572, 1609, 1652, 2221, 2348
ApeKI GCWGC 5 cut(s) 212, 467, 1253, 1374, 3684
Asp700I GAANNNNTTC 2 cut(s) 3741, 3755
AspLEI GCGC 2 cut(s) 2721, 3662
AspS9I GGNCC 3 cut(s) 1914, 2945, 3454
AsuC2I CCSGG 4 cut(s) 2709, 2710, 3720, 3767
AsuHPI GGTGA 9 cut(s) 101, 463, 2138, 2464, 2708, 2762, 2770, 3274, 3532
AvaI CYCGRG 2 cut(s) 2708, 3466
AvaII GGWCC 3 cut(s) 1914, 2945, 3454
BaeGI GKGCMC 3 cut(s) 1219, 2574, 3233
BalI TGGCCA 2 cut(s) 485, 1654
BamHI GGATCC 1 cut(s) 355
BanI GGYRCC 1 cut(s) 2571
BanII GRGCYC 2 cut(s) 14, 642
BauI CACGAG 1 cut(s) 3544
BbsI GAAGAC 7 cut(s) 99, 329, 713, 1416, 3035, 3063, 3758
Bbv12I GWGCWC 3 cut(s) 14, 642, 3580
BbvI GCAGC 5 cut(s) 199, 454, 1265, 1361, 3671
BccI CCATC 7 cut(s) 1526, 1538, 1601, 1664, 1870, 2074, 2368
BceAI ACGGC 2 cut(s) 587, 2363
BcgI CGANNNNNNTGC 4 cut(s) 3464, 3498, 3557, 3591
BciT130I CCWGG 1 cut(s) 1018
BciVI GTATCC 1 cut(s) 793
BclI TGATCA 2 cut(s) 1291, 3279
BcnI CCSGG 4 cut(s) 2709, 2710, 3720, 3767
BfaI CTAG 4 cut(s) 209, 2096, 2616, 3458
BfmI CTRYAG 5 cut(s) 2556, 2795, 3193, 3255, 3526
BfrI CTTAAG 1 cut(s) 2726
BfuI GTATCC 1 cut(s) 793
BglII AGATCT 3 cut(s) 826, 909, 1828
BisI GCNGC 6 cut(s) 213, 468, 1254, 1375, 3486, 3685
BlsI GCNGC 6 cut(s) 214, 469, 1255, 1376, 3487, 3686
Bme1390I CCNGG 5 cut(s) 1018, 2709, 2710, 3720, 3767
Bme18I GGWCC 3 cut(s) 1914, 2945, 3454
BmeT110I CYCGRG 2 cut(s) 2708, 3466
BmgBI CACGTC 1 cut(s) 2231
BmgT120I GGNCC 3 cut(s) 1914, 2945, 3454
BmiI GGNNCC 5 cut(s) 357, 2573, 3472, 3507, 3700
BmrFI CCNGG 5 cut(s) 1018, 2709, 2710, 3720, 3767
BmrI ACTGGG 3 cut(s) 963, 2140, 2161
BmsI GCATC 8 cut(s) 177, 596, 1078, 1339, 1538, 1548, 1651, 2872
BmuI ACTGGG 3 cut(s) 963, 2140, 2161
BoxI GACNNNNGTC 2 cut(s) 2335, 3605
BpiI GAAGAC 7 cut(s) 99, 329, 713, 1416, 3035, 3063, 3758
BpmI CTGGAG 2 cut(s) 866, 3717
BpuEI CTTGAG 7 cut(s) 1286, 1976, 2055, 2528, 2531, 2914, 3409
BpuMI CCSGG 4 cut(s) 2709, 2710, 3720, 3767
BsaHI GRCGYC 1 cut(s) 1261
BsaI GGTCTC 2 cut(s) 1190, 2718
BsaJI CCNNGG 8 cut(s) 53, 169, 714, 811, 1041, 2524, 2708, 3465
BsaXI ACNNNNNCTCC 4 cut(s) 215, 245, 839, 869
Bsc4I CCNNNNNNNGG 2 cut(s) 3238, 3568
Bse3DI GCAATG 2 cut(s) 2120, 2671
BseBI CCWGG 1 cut(s) 1018
BseDI CCNNGG 8 cut(s) 53, 169, 714, 811, 1041, 2524, 2708, 3465
BseGI GGATG 8 cut(s) 169, 192, 289, 1537, 1549, 1553, 1563, 1666
BseLI CCNNNNNNNGG 2 cut(s) 3238, 3568
BseMI GCAATG 2 cut(s) 2120, 2671
BseMII CTCAG 3 cut(s) 91, 1081, 1692
BseRI GAGGAG 6 cut(s) 42, 236, 863, 866, 3454, 3572
BseSI GKGCMC 3 cut(s) 1219, 2574, 3233
BseX3I CGGCCG 1 cut(s) 2348
BseXI GCAGC 5 cut(s) 199, 454, 1265, 1361, 3671
BseYI CCCAGC 2 cut(s) 832, 2567
BsgI GTGCAG 2 cut(s) 580, 3422
Bsh1236I CGCG 4 cut(s) 3488, 3564, 3660, 3845
Bsh1285I CGRYCG 3 cut(s) 2351, 3634, 3818
BshFI GGCC 6 cut(s) 485, 574, 1611, 1654, 2223, 2350
BshNI GGYRCC 1 cut(s) 2571
BsiEI CGRYCG 3 cut(s) 2351, 3634, 3818
BsiHKAI GWGCWC 3 cut(s) 14, 642, 3580
BsiHKCI CYCGRG 2 cut(s) 2708, 3466
BsiSI CCGG 3 cut(s) 2709, 3720, 3766
BslFI GGGAC 4 cut(s) 1843, 1852, 3632, 3816
BslI CCNNNNNNNGG 2 cut(s) 3238, 3568
BsmBI CGTCTC 1 cut(s) 2668
BsmFI GGGAC 4 cut(s) 1843, 1852, 3632, 3816
BsmI GAATGC 3 cut(s) 1771, 2203, 2273
BsnI GGCC 6 cut(s) 485, 574, 1611, 1654, 2223, 2350
Bso31I GGTCTC 2 cut(s) 1190, 2718
BsoBI CYCGRG 2 cut(s) 2708, 3466
Bsp1286I GDGCHC 6 cut(s) 14, 642, 1219, 2574, 3233, 3580
Bsp1407I TGTACA 1 cut(s) 3293
Bsp143I GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
Bsp19I CCATGG 2 cut(s) 714, 1041
BspANI GGCC 6 cut(s) 485, 574, 1611, 1654, 2223, 2350
BspCNI CTCAG 3 cut(s) 90, 1080, 1691
BspFNI CGCG 4 cut(s) 3488, 3564, 3660, 3845
BspHI TCATGA 1 cut(s) 642
BspLI GGNNCC 5 cut(s) 357, 2573, 3472, 3507, 3700
BspPI GGATC 5 cut(s) 350, 363, 1777, 2288, 3230
BspQI GCTCTTC 2 cut(s) 2094, 2853
BspT107I GGYRCC 1 cut(s) 2571
BspTI CTTAAG 1 cut(s) 2726
BspTNI GGTCTC 2 cut(s) 1190, 2718
BsrDI GCAATG 2 cut(s) 2120, 2671
BsrGI TGTACA 1 cut(s) 3293
BssECI CCNNGG 8 cut(s) 53, 169, 714, 811, 1041, 2524, 2708, 3465
BssMI GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
BssNI GRCGYC 1 cut(s) 1261
BssSI CACGAG 1 cut(s) 3544
BssT1I CCWWGG 4 cut(s) 169, 714, 811, 1041
Bst2BI CACGAG 1 cut(s) 3544
Bst2UI CCWGG 1 cut(s) 1018
Bst6I CTCTTC 4 cut(s) 39, 2094, 2853, 3023
BstACI GRCGYC 1 cut(s) 1261
BstAFI CTTAAG 1 cut(s) 2726
BstAPI GCANNNNNTGC 1 cut(s) 1707
BstAUI TGTACA 1 cut(s) 3293
BstC8I GCNNGC 9 cut(s) 1712, 3106, 3650, 3654, 3658, 3716, 3835, 3839, 3843
BstDEI CTNAG 8 cut(s) 77, 405, 922, 1067, 1678, 1832, 1937, 1964
BstDSI CCRYGG 3 cut(s) 714, 1041, 2524
BstF5I GGATG 8 cut(s) 169, 192, 289, 1537, 1549, 1553, 1563, 1666
BstFNI CGCG 4 cut(s) 3488, 3564, 3660, 3845
BstHHI GCGC 2 cut(s) 2721, 3662
BstKTI GATC 9 cut(s) 358, 829, 912, 1294, 1785, 1831, 2296, 3225, 3282
BstMBI GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
BstMCI CGRYCG 3 cut(s) 2351, 3634, 3818
BstMWI GCNNNNNNNGC 4 cut(s) 614, 1202, 1707, 2110
BstNI CCWGG 1 cut(s) 1018
BstNSI RCATGY 3 cut(s) 728, 740, 3027
BstPAI GACNNNNGTC 2 cut(s) 2335, 3605
BstSCI CCNGG 5 cut(s) 1016, 2707, 2708, 3718, 3765
BstSFI CTRYAG 5 cut(s) 2556, 2795, 3193, 3255, 3526
BstSLI GKGCMC 3 cut(s) 1219, 2574, 3233
BstUI CGCG 4 cut(s) 3488, 3564, 3660, 3845
BstV1I GCAGC 5 cut(s) 199, 454, 1265, 1361, 3671
BstV2I GAAGAC 7 cut(s) 99, 329, 713, 1416, 3035, 3063, 3758
BstX2I RGATCY 5 cut(s) 355, 826, 909, 1782, 1828
BstXI CCANNNNNNTGG 2 cut(s) 749, 1726
BstYI RGATCY 5 cut(s) 355, 826, 909, 1782, 1828
BstZI CGGCCG 1 cut(s) 2348
BsuI GTATCC 1 cut(s) 793
BsuRI GGCC 6 cut(s) 485, 574, 1611, 1654, 2223, 2350
BtgI CCRYGG 3 cut(s) 714, 1041, 2524
BtrI CACGTC 1 cut(s) 2231
BtsCI GGATG 8 cut(s) 169, 192, 289, 1537, 1549, 1553, 1563, 1666
BtsI GCAGTG 1 cut(s) 3208
Cac8I GCNNGC 9 cut(s) 1712, 3106, 3650, 3654, 3658, 3716, 3835, 3839, 3843
CaiI CAGNNNCTG 1 cut(s) 3007
CciI TCATGA 1 cut(s) 642
CfoI GCGC 2 cut(s) 2721, 3662
Cfr13I GGNCC 3 cut(s) 1914, 2945, 3454
Cfr9I CCCGGG 1 cut(s) 2708
CseI GACGC 1 cut(s) 1269
Csp6I GTAC 7 cut(s) 569, 1071, 1536, 2479, 2659, 3294, 3447
CviQI GTAC 7 cut(s) 569, 1071, 1536, 2479, 2659, 3294, 3447
DdeI CTNAG 8 cut(s) 77, 405, 922, 1067, 1678, 1832, 1937, 1964
DpnI GATC 9 cut(s) 357, 828, 911, 1293, 1784, 1830, 2295, 3224, 3281
DpnII GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
DraI TTTAAA 1 cut(s) 1644
DraIII CACNNNGTG 1 cut(s) 1280
DrdI GACNNNNNNGTC 2 cut(s) 2547, 2620
DseDI GACNNNNNNGTC 2 cut(s) 2547, 2620
EaeI YGGCCR 3 cut(s) 483, 1652, 2348
EagI CGGCCG 1 cut(s) 2348
Eam1104I CTCTTC 4 cut(s) 39, 2094, 2853, 3023
EarI CTCTTC 4 cut(s) 39, 2094, 2853, 3023
Ecl136II GAGCTC 2 cut(s) 12, 640
EclXI CGGCCG 1 cut(s) 2348
Eco130I CCWWGG 4 cut(s) 169, 714, 811, 1041
Eco147I AGGCCT 1 cut(s) 2223
Eco24I GRGCYC 2 cut(s) 14, 642
Eco31I GGTCTC 2 cut(s) 1190, 2718
Eco32I GATATC 1 cut(s) 2256
Eco47I GGWCC 3 cut(s) 1914, 2945, 3454
Eco52I CGGCCG 1 cut(s) 2348
Eco53kI GAGCTC 2 cut(s) 12, 640
Eco57I CTGAAG 6 cut(s) 161, 333, 968, 1623, 1727, 2756
Eco88I CYCGRG 2 cut(s) 2708, 3466
EcoICRI GAGCTC 2 cut(s) 12, 640
EcoRI GAATTC 3 cut(s) 131, 963, 2422
EcoRII CCWGG 1 cut(s) 1016
EcoRV GATATC 1 cut(s) 2256
EcoT14I CCWWGG 4 cut(s) 169, 714, 811, 1041
EcoT22I ATGCAT 2 cut(s) 1563, 2832
EcoT38I GRGCYC 2 cut(s) 14, 642
ErhI CCWWGG 4 cut(s) 169, 714, 811, 1041
Esp3I CGTCTC 1 cut(s) 2668
FalI AAGNNNNNCTT 6 cut(s) 804, 836, 1108, 1140, 1346, 1378
FaqI GGGAC 4 cut(s) 1843, 1852, 3632, 3816
FauI CCCGC 4 cut(s) 1204, 2161, 3569, 3665
FauNDI CATATG 2 cut(s) 932, 2936
FbaI TGATCA 2 cut(s) 1291, 3279
FblI GTMKAC 1 cut(s) 3588
Fnu4HI GCNGC 6 cut(s) 213, 468, 1254, 1375, 3486, 3685
FokI GGATG 8 cut(s) 176, 199, 296, 1544, 1556, 1560, 1570, 1673
FriOI GRGCYC 2 cut(s) 14, 642
Fsp4HI GCNGC 6 cut(s) 213, 468, 1254, 1375, 3486, 3685
FspBI CTAG 4 cut(s) 209, 2096, 2616, 3458
FspI TGCGCA 1 cut(s) 2720
GlaI GCGC 2 cut(s) 2720, 3661
GluI GCNGC 6 cut(s) 213, 468, 1254, 1375, 3486, 3685
GsaI CCCAGC 2 cut(s) 836, 2571
GsuI CTGGAG 2 cut(s) 866, 3717
HaeIII GGCC 6 cut(s) 485, 574, 1611, 1654, 2223, 2350
HapII CCGG 3 cut(s) 2709, 3720, 3766
HgaI GACGC 1 cut(s) 1269
HhaI GCGC 2 cut(s) 2721, 3662
Hin1I GRCGYC 1 cut(s) 1261
Hin6I GCGC 2 cut(s) 2719, 3660
HinP1I GCGC 2 cut(s) 2719, 3660
HincII GTYRAC 3 cut(s) 1456, 2217, 3678
HindII GTYRAC 3 cut(s) 1456, 2217, 3678
HindIII AAGCTT 3 cut(s) 1512, 1712, 1890
HpaI GTTAAC 2 cut(s) 1456, 2217
HpaII CCGG 3 cut(s) 2709, 3720, 3766
HphI GGTGA 9 cut(s) 101, 463, 2138, 2464, 2708, 2762, 2770, 3274, 3532
Hpy166II GTNNAC 7 cut(s) 1456, 2217, 2308, 2481, 3296, 3589, 3678
Hpy8I GTNNAC 7 cut(s) 1456, 2217, 2308, 2481, 3296, 3589, 3678
Hpy99I CGWCG 5 cut(s) 1263, 3479, 3569, 3645, 3816
HpyAV CCTTC 8 cut(s) 48, 409, 442, 640, 880, 2674, 2731, 3243
HpyCH4IV ACGT 7 cut(s) 1279, 2230, 2562, 2661, 2988, 3318, 3445
HpyF10VI GCNNNNNNNGC 4 cut(s) 614, 1202, 1707, 2110
HpyF3I CTNAG 8 cut(s) 77, 405, 922, 1067, 1678, 1832, 1937, 1964
HpySE526I ACGT 7 cut(s) 1279, 2230, 2562, 2661, 2988, 3318, 3445
Hsp92I GRCGYC 1 cut(s) 1261
HspAI GCGC 2 cut(s) 2719, 3660
Ksp22I TGATCA 2 cut(s) 1291, 3279
KspAI GTTAAC 2 cut(s) 1456, 2217
Kzo9I GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
LguI GCTCTTC 2 cut(s) 2094, 2853
LmnI GCTCC 5 cut(s) 17, 55, 2956, 3470, 3698
Lsp1109I GCAGC 5 cut(s) 199, 454, 1265, 1361, 3671
LweI GCATC 8 cut(s) 177, 596, 1078, 1339, 1538, 1548, 1651, 2872
MaeI CTAG 4 cut(s) 209, 2096, 2616, 3458
MaeII ACGT 7 cut(s) 1279, 2230, 2562, 2661, 2988, 3318, 3445
MalI GATC 9 cut(s) 357, 828, 911, 1293, 1784, 1830, 2295, 3224, 3281
MboI GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
MfeI CAATTG 3 cut(s) 1191, 1403, 3050
MflI RGATCY 5 cut(s) 355, 826, 909, 1782, 1828
MhlI GDGCHC 6 cut(s) 14, 642, 1219, 2574, 3233, 3580
MlsI TGGCCA 2 cut(s) 485, 1654
MluNI TGGCCA 2 cut(s) 485, 1654
MlyI GAGTC 9 cut(s) 233, 863, 1488, 1624, 1878, 2345, 2535, 3328, 3799
MmeI TCCRAC 3 cut(s) 480, 2013, 3294
Mox20I TGGCCA 2 cut(s) 485, 1654
Mph1103I ATGCAT 2 cut(s) 1563, 2832
MroXI GAANNNNTTC 2 cut(s) 3741, 3755
MscI TGGCCA 2 cut(s) 485, 1654
MslI CAYNNNNRTG 4 cut(s) 513, 1931, 2417, 2523
Msp20I TGGCCA 2 cut(s) 485, 1654
MspA1I CMGCKG 1 cut(s) 3684
MspCI CTTAAG 1 cut(s) 2726
MspI CCGG 3 cut(s) 2709, 3720, 3766
MspR9I CCNGG 5 cut(s) 1018, 2709, 2710, 3720, 3767
MunI CAATTG 3 cut(s) 1191, 1403, 3050
Mva1269I GAATGC 3 cut(s) 1771, 2203, 2273
MvaI CCWGG 1 cut(s) 1018
MvnI CGCG 4 cut(s) 3488, 3564, 3660, 3845
MwoI GCNNNNNNNGC 4 cut(s) 614, 1202, 1707, 2110
NciI CCSGG 4 cut(s) 2709, 2710, 3720, 3767
NcoI CCATGG 2 cut(s) 714, 1041
NdeI CATATG 2 cut(s) 932, 2936
NdeII GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
NlaIV GGNNCC 5 cut(s) 357, 2573, 3472, 3507, 3700
NmeAIII GCCGAG 1 cut(s) 2376
NmuCI GTSAC 6 cut(s) 667, 1272, 2126, 2226, 2452, 2750
NsbI TGCGCA 1 cut(s) 2720
NsiI ATGCAT 2 cut(s) 1563, 2832
NspI RCATGY 3 cut(s) 728, 740, 3027
PagI TCATGA 1 cut(s) 642
PceI AGGCCT 1 cut(s) 2223
PciI ACATGT 2 cut(s) 724, 3023
PciSI GCTCTTC 2 cut(s) 2094, 2853
PctI GAATGC 3 cut(s) 1771, 2203, 2273
PdmI GAANNNNTTC 2 cut(s) 3741, 3755
PfeI GAWTC 6 cut(s) 298, 1951, 1960, 2355, 2961, 3557
PkrI GCNGC 6 cut(s) 214, 469, 1255, 1376, 3487, 3686
PleI GAGTC 9 cut(s) 232, 862, 1487, 1624, 1878, 2344, 2535, 3328, 3798
PpsI GAGTC 9 cut(s) 232, 862, 1487, 1624, 1878, 2344, 2535, 3328, 3798
PscI ACATGT 2 cut(s) 724, 3023
PshAI GACNNNNGTC 2 cut(s) 2335, 3605
Psp124BI GAGCTC 2 cut(s) 14, 642
Psp6I CCWGG 1 cut(s) 1016
PspFI CCCAGC 2 cut(s) 832, 2567
PspGI CCWGG 1 cut(s) 1016
PspN4I GGNNCC 5 cut(s) 357, 2573, 3472, 3507, 3700
PspPI GGNCC 3 cut(s) 1914, 2945, 3454
PstNI CAGNNNCTG 1 cut(s) 3007
PsuI RGATCY 5 cut(s) 355, 826, 909, 1782, 1828
PvuII CAGCTG 1 cut(s) 3684
RsaI GTAC 7 cut(s) 570, 1072, 1537, 2480, 2660, 3295, 3448
RsaNI GTAC 7 cut(s) 569, 1071, 1536, 2479, 2659, 3294, 3447
RseI CAYNNNNRTG 4 cut(s) 513, 1931, 2417, 2523
SacI GAGCTC 2 cut(s) 14, 642
SapI GCTCTTC 2 cut(s) 2094, 2853
SatI GCNGC 6 cut(s) 213, 468, 1254, 1375, 3486, 3685
Sau3AI GATC 9 cut(s) 355, 826, 909, 1291, 1782, 1828, 2293, 3222, 3279
Sau96I GGNCC 3 cut(s) 1914, 2945, 3454
SchI GAGTC 9 cut(s) 233, 863, 1488, 1624, 1878, 2345, 2535, 3328, 3799
ScrFI CCNGG 5 cut(s) 1018, 2709, 2710, 3720, 3767
SduI GDGCHC 6 cut(s) 14, 642, 1219, 2574, 3233, 3580
SfaNI GCATC 8 cut(s) 177, 596, 1078, 1339, 1538, 1548, 1651, 2872
SfcI CTRYAG 5 cut(s) 2556, 2795, 3193, 3255, 3526
SinI GGWCC 3 cut(s) 1914, 2945, 3454
SmaI CCCGGG 1 cut(s) 2710
SmiMI CAYNNNNRTG 4 cut(s) 513, 1931, 2417, 2523
SmlI CTYRAG 8 cut(s) 1265, 1955, 2070, 2510, 2543, 2726, 2893, 3388
SmoI CTYRAG 8 cut(s) 1265, 1955, 2070, 2510, 2543, 2726, 2893, 3388
SseBI AGGCCT 1 cut(s) 2223
SspI AATATT 1 cut(s) 2982
SspMI CTAG 4 cut(s) 209, 2096, 2616, 3458
SstI GAGCTC 2 cut(s) 14, 642
StuI AGGCCT 1 cut(s) 2223
StyD4I CCNGG 5 cut(s) 1016, 2707, 2708, 3718, 3765
StyI CCWWGG 4 cut(s) 169, 714, 811, 1041
TaiI ACGT 7 cut(s) 1282, 2233, 2565, 2664, 2991, 3321, 3448
TaqII GACCGA 1 cut(s) 3442
TatI WGTACW 1 cut(s) 3293
TauI GCSGC 1 cut(s) 3488
TfiI GAWTC 6 cut(s) 298, 1951, 1960, 2355, 2961, 3557
TseFI GTSAC 6 cut(s) 667, 1272, 2126, 2226, 2452, 2750
TseI GCWGC 5 cut(s) 212, 467, 1253, 1374, 3684
Tsp45I GTSAC 6 cut(s) 667, 1272, 2126, 2226, 2452, 2750
TspGWI ACGGA 5 cut(s) 1673, 1777, 2480, 2656, 3518
TspMI CCCGGG 1 cut(s) 2708
Vha464I CTTAAG 1 cut(s) 2726
VpaK11BI GGWCC 3 cut(s) 1914, 2945, 3454
XceI RCATGY 3 cut(s) 728, 740, 3027
XmaI CCCGGG 1 cut(s) 2708
XmiI GTMKAC 1 cut(s) 3588
XmnI GAANNNNTTC 2 cut(s) 3741, 3755
XspI CTAG 4 cut(s) 209, 2096, 2616, 3458
Zsp2I ATGCAT 2 cut(s) 1563, 2832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.