Rmu_sc0003069.1_g000019

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003069.1
OG0000085
Physical Location & Seq
Reverse (-)
93482 .. 100010
6529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003069.1_g000019.1.cds

Sequence Viewer

Length: 3663 bp
atgaatagaacaaaattcagcggcttcaacgcattctcgaaaaggtctgatccttccattggatactatgcatttgttatgacttatgatcaatgtcatgattgttactgcatcttcaatgacatgctagggttagtcatattcttcaatcactggcgaggtgaggacgaaatcgccattgctggcttgctgcgatccttggattggagcagtttttcaggttacttgataagtcacatggttgtaaagcctgagccaatgtcggaggataatcaagaaccggttgatgttgatgcctctgcatctcttccttcatcatcagctcctcggtggaagcatgatgtgtttttgagcttcaggggtgcagacgctcgcaagggtattgcatttgagttatacgatcgactgcagaacaggagaggaatcaaaacattcatggatgaccaagaccttcaagtaggggatgttatttctcccactctcctaacggcaattaaagaatcaaggtttgcaattattgttctctctcaaaactacgcctcttccacttggtgtttggaggaacttagaaacgtttgtgaatgcatggaagaagacaacaatagaattctgccacttttttattatgtggatcctactgatgtacgatatcagaagagcagtttcggagactctttcactcagcatgaaaaatctgggcgacacagatcagacaagctgcagcagtggagagctgctttaaaaaaagtggcaaatttctctgggtggcatacactgaattataaaactgaaagagaacttttggatgccattgaggaatctgtgtgcaataaattacgacctgctgaacttgagtttaaaatgtccattggaggttttgaagaatttgcagcaacaaaacaagccattgatgaggttatgaatgcgctaaaagatgatgaggccactaccattggagtctacggaatggggggcgttggaaagacgacaatggtgaaatatgtgggagcacaagcccaaaaaagtaggctttttaatcaagtgattatggctgtcgtatcccaaaaccccgacttgatgaaaattcaagagacatttgccgaactgctgggctttaaattggaggagaagacagaaattggaagatccattaaattgaaggataagataatgagaggaactgggatcctcataatcttggatgacatttggaagagaatagacttttcagacattggaattccgagccacaacgaacttcaaaaatgcaattccaaagtcctactgaccaccagaaaatcgggagtttgtaataccatgaagagccatgcaaaaattcatctcaatatcttatcagaagaagatgcttggagcttatttgtgaaggaagtagggaatgcttttgacagatcttccaatttctatgatgtagcgagtgaggtggcaagagaatgcgccggtctaccggttgctttggtagcagttgcgagggcccttcgagatgaaggtttggacggatggaaacaagctgctcgacgactgaaagcgtctcaacctcccatccctgaagatgagggagatgtgttcaaatgcataaagttaagctatgattacttgaaatctgatgattccaaatcatgcttcttgctttgctgcctgttcccagaagattatgatatcccaattgactacctgttcaagtatggagttgggaaagggatgtttcaagattcaaacttgctagatgcccgagccacaacatatttagtggtgaaggcccttaaagattctagcttgcttttggacgctgaagatgacggatgcgtaaagatgcatgatgtcattcgggatatggcaatctcaatttcgttatcggaaggccagcgggtcttggtgaaagctggctgtgaattgaagaattggccacagattgatgcacataaaggctactctggaatctcactaatggtgaacaaaatttgcaagctaccccaagagttggtatgtccaaatctccagattttattgctgcaacacaatgcttcattaaatgatatcccaaactctttcttccaaagtcagaaagaattaagggtcttagatcttagccgcactggtatttcattactaccgcaatcaatcaatttcctaaccaatcttcaagctttgtatttagatcattgcaacagcataattgacatttctgtaatcggaaaacttaacaagcttgagattcttagtatgagaggaattgctctgagagaatttccaagagaaataggacaattgaccaatctaaggatgttagatgtcagtgctgaatttaatctactgacactgagattggatggacgtattgccacacttccatctgaagtgatatcaaagttgcatagattagaagaactgtacatgcaatgtacattttgggactggaggagtaatattgatggagaaggggatggattctccgagagctcggagagtgatactgatggagaaggggaagaaactaatattggctttgatgaattagttggtttatcatatttaagcattctgaaagtttgcatatcagatggaaattgcatccctagaagtattgaggttgaaccgaattgggtttacttcagtattagtattggcagctgcaatgatatagcgagacatagtatgaacattccatccggtcataattgtagatccttgtgtcttgacagtactgacacaaccatgggaacctttccagactggtttgtaaacgctgtggtaaagaatactgaggggctacagtataaagactgcagagggttaagtaacattcttgtggaatatgaccgtgggaggttacatggactgaaatttctcaatgtaattggtcgctgtgagaacttgagagaattgatgaatgcaataacatgtgttccagatatgcctgtgtttgagaagttggaaaggttgaatctggaatacctggatgacctgaagcagttatgtgttggtgagttgccacctggatctctctggagtctgaaattactgaaggtcagtcggtgtcctaatttggggaatgtactgttgccatcaaaattgttgcagaaactaccaaatctggaaaaactaatctgtgagacaagtggagtggaatatatttttggatgtgaaggatttgagccggatcaaacaaatctgagagagatggagttatgggatctagatgtaataagaagcatatgtaatggtcctgccccacgtggaatgttccagactctaaaggaattggccatatataattgcaacttccagggaagcctcttcacatttgatgtcgctcagtgtctttttcaattggaaaagcttactgtagtcaaatgccctctgttggaaggagtaatcgaagcaaggagggaaacattgaacaacaagaagaccgttcttccaaaattgaagaacttacgtttgcatagtcttccaatgttgtacaagggaagtgctactattgattttgagtgtccttcattggaagacttgcatctgcaggactgcccccacttgtcatttcattcctctgcttctgcttctgactacttccacagcaggaaccaagtccttttcaatgatatgcgtcatcgcgttgatttaatgtatgtcgctgggtcataa

Protein Analysis

1220

Amino Acids

137.81

Weight (kDa)

5.37

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
Acc36I ACCTGC 1 cut(s) 850
AccB7I CCANNNNNTGG 1 cut(s) 1999
AccI GTMKAC 2 cut(s) 960, 1462
AccII CGCG 1 cut(s) 3633
AciI CCGC 4 cut(s) 21, 1885, 2110, 2132
AclI AACGTT 1 cut(s) 573
AcoI YGGCCR 2 cut(s) 1922, 3282
AcuI CTGAAG 7 cut(s) 340, 1587, 1830, 2394, 2614, 3005, 3062
AcvI CACGTG 1 cut(s) 3254
AdeI CACNNNGTG 1 cut(s) 552
AfaI GTAC 6 cut(s) 645, 2411, 2422, 2722, 3075, 3482
AfiI CCNNNNNNNGG 6 cut(s) 59, 204, 1999, 2298, 3065, 3382
AflIII ACRYGT 1 cut(s) 2918
AgeI ACCGGT 2 cut(s) 280, 1465
AjnI CCWGG 3 cut(s) 2973, 3013, 3303
AjuI GAANNNNNNNTTGG 6 cut(s) 1625, 1657, 2502, 2534, 3138, 3170
AloI GAACNNNNNNTCC 2 cut(s) 2669, 2701
Alw21I GWGCWC 2 cut(s) 1012, 2480
Alw26I GTCTC 5 cut(s) 663, 1085, 1554, 2659, 3125
Ama87I CYCGRG 1 cut(s) 1749
AoxI GGCC 6 cut(s) 942, 1491, 1776, 1879, 1922, 3282
ApaI GGGCCC 1 cut(s) 1495
AsiGI ACCGGT 2 cut(s) 280, 1465
AspLEI GCGC 2 cut(s) 928, 1457
AspS9I GGNCC 4 cut(s) 1491, 1492, 1777, 3242
AsuHPI GGTGA 6 cut(s) 173, 1006, 1783, 1906, 1981, 3014
AvaI CYCGRG 1 cut(s) 1749
AvaII GGWCC 1 cut(s) 3242
BaeGI GKGCMC 1 cut(s) 1495
BalI TGGCCA 2 cut(s) 1924, 3284
BamHI GGATCC 2 cut(s) 631, 1185
BanII GRGCYC 2 cut(s) 1495, 2480
BbrPI CACGTG 1 cut(s) 3254
BbsI GAAGAC 5 cut(s) 600, 1136, 3434, 3461, 3531
Bbv12I GWGCWC 2 cut(s) 1012, 2480
BceAI ACGGC 1 cut(s) 504
BciT130I CCWGG 3 cut(s) 2975, 3015, 3305
BciVI GTATCC 2 cut(s) 56, 1069
BclI TGATCA 1 cut(s) 88
BcoDI GTCTC 5 cut(s) 663, 1085, 1554, 2659, 3125
BfaI CTAG 5 cut(s) 128, 1742, 1791, 2595, 3215
BfmI CTRYAG 6 cut(s) 407, 719, 2789, 2803, 3363, 3536
BfuAI ACCTGC 1 cut(s) 850
BfuI GTATCC 2 cut(s) 56, 1069
BglII AGATCT 2 cut(s) 1409, 2101
BmcAI AGTACT 1 cut(s) 2722
Bme1390I CCNGG 3 cut(s) 2975, 3015, 3305
Bme18I GGWCC 1 cut(s) 3242
BmeT110I CYCGRG 1 cut(s) 1749
BmgT120I GGNCC 4 cut(s) 1491, 1492, 1777, 3242
BmiI GGNNCC 5 cut(s) 633, 1187, 1493, 2740, 3602
BmrFI CCNGG 3 cut(s) 2975, 3015, 3305
BmrI ACTGGG 1 cut(s) 1191
BmuI ACTGGG 1 cut(s) 1191
BpiI GAAGAC 5 cut(s) 600, 1136, 3434, 3461, 3531
BpmI CTGGAG 3 cut(s) 2000, 2455, 3046
Bpu10I CCTNAGC 1 cut(s) 252
BpuEI CTTGAG 3 cut(s) 872, 2249, 2914
BsaAI YACGTR 1 cut(s) 3254
BsaJI CCNNGG 5 cut(s) 198, 326, 2733, 2839, 3304
BsaWI WCCGGW 3 cut(s) 280, 1465, 2687
Bsc4I CCNNNNNNNGG 6 cut(s) 59, 204, 1999, 2298, 3065, 3382
Bse118I RCCGGY 3 cut(s) 280, 1457, 1465
Bse1I ACTGG 5 cut(s) 158, 1186, 2119, 2438, 2756
Bse3DI GCAATG 4 cut(s) 177, 2179, 2423, 2659
BseBI CCWGG 3 cut(s) 2975, 3015, 3305
BseDI CCNNGG 5 cut(s) 198, 326, 2733, 2839, 3304
BseLI CCNNNNNNNGG 6 cut(s) 59, 204, 1999, 2298, 3065, 3382
BseMI GCAATG 4 cut(s) 177, 2179, 2423, 2659
BseMII CTCAG 7 cut(s) 243, 695, 2249, 2330, 2772, 3182, 3347
BseNI ACTGG 5 cut(s) 158, 1186, 2119, 2438, 2756
BseRI GAGGAG 3 cut(s) 315, 1139, 2452
BseSI GKGCMC 1 cut(s) 1495
BseYI CCCAGC 2 cut(s) 1108, 3653
BsgI GTGCAG 1 cut(s) 384
Bsh1236I CGCG 1 cut(s) 3633
Bsh1285I CGRYCG 1 cut(s) 403
BshFI GGCC 6 cut(s) 944, 1493, 1778, 1881, 1924, 3284
BshTI ACCGGT 2 cut(s) 280, 1465
BsiEI CGRYCG 1 cut(s) 403
BsiHKAI GWGCWC 2 cut(s) 1012, 2480
BsiHKCI CYCGRG 1 cut(s) 1749
BsiSI CCGG 5 cut(s) 281, 1458, 1466, 2688, 3176
BslFI GGGAC 1 cut(s) 2444
BslI CCNNNNNNNGG 6 cut(s) 59, 204, 1999, 2298, 3065, 3382
BsmAI GTCTC 5 cut(s) 663, 1085, 1554, 2659, 3125
BsmBI CGTCTC 1 cut(s) 1554
BsmFI GGGAC 1 cut(s) 2444
BsmI GAATGC 7 cut(s) 32, 587, 928, 1402, 1457, 2556, 2914
BsnI GGCC 6 cut(s) 944, 1493, 1778, 1881, 1924, 3284
BsoBI CYCGRG 1 cut(s) 1749
Bsp120I GGGCCC 1 cut(s) 1491
Bsp1286I GDGCHC 3 cut(s) 1012, 1495, 2480
Bsp1407I TGTACA 3 cut(s) 2409, 2420, 3480
Bsp19I CCATGG 1 cut(s) 2733
BspACI CCGC 4 cut(s) 21, 1885, 2110, 2132
BspANI GGCC 6 cut(s) 944, 1493, 1778, 1881, 1924, 3284
BspCNI CTCAG 7 cut(s) 244, 694, 2250, 2331, 2773, 3183, 3346
BspFNI CGCG 1 cut(s) 3633
BspHI TCATGA 1 cut(s) 97
BspLI GGNNCC 5 cut(s) 633, 1187, 1493, 2740, 3602
BspMAI CTGCAG 4 cut(s) 411, 723, 2807, 3540
BspMI ACCTGC 1 cut(s) 850
BspQI GCTCTTC 2 cut(s) 650, 1316
BsrDI GCAATG 4 cut(s) 177, 2179, 2423, 2659
BsrFI RCCGGY 3 cut(s) 280, 1457, 1465
BsrGI TGTACA 3 cut(s) 2409, 2420, 3480
BsrI ACTGG 5 cut(s) 158, 1186, 2119, 2438, 2756
BssAI RCCGGY 3 cut(s) 280, 1457, 1465
BssECI CCNNGG 5 cut(s) 198, 326, 2733, 2839, 3304
BssT1I CCWWGG 2 cut(s) 198, 2733
Bst2UI CCWGG 3 cut(s) 2975, 3015, 3305
Bst4CI ACNGT 7 cut(s) 2409, 2720, 2793, 2840, 3078, 3364, 3433
Bst6I CTCTTC 6 cut(s) 312, 547, 650, 1208, 1316, 3320
BstAUI TGTACA 3 cut(s) 2409, 2420, 3480
BstBAI YACGTR 1 cut(s) 3254
BstC8I GCNNGC 7 cut(s) 184, 188, 373, 1796, 1883, 1903, 1985
BstDSI CCRYGG 2 cut(s) 2733, 2839
BstFNI CGCG 1 cut(s) 3633
BstHHI GCGC 2 cut(s) 928, 1457
BstMAI GTCTC 5 cut(s) 663, 1085, 1554, 2659, 3125
BstMCI CGRYCG 1 cut(s) 403
BstMWI GCNNNNNNNGC 1 cut(s) 1478
BstNI CCWGG 3 cut(s) 2975, 3015, 3305
BstNSI RCATGY 3 cut(s) 127, 2416, 2922
BstSCI CCNGG 3 cut(s) 2973, 3013, 3303
BstSFI CTRYAG 6 cut(s) 407, 719, 2789, 2803, 3363, 3536
BstSLI GKGCMC 1 cut(s) 1495
BstUI CGCG 1 cut(s) 3633
BstV2I GAAGAC 5 cut(s) 600, 1136, 3434, 3461, 3531
BstX2I RGATCY 8 cut(s) 631, 1145, 1185, 1409, 2101, 2702, 3017, 3211
BstYI RGATCY 8 cut(s) 631, 1145, 1185, 1409, 2101, 2702, 3017, 3211
BsuI GTATCC 2 cut(s) 56, 1069
BsuRI GGCC 6 cut(s) 944, 1493, 1778, 1881, 1924, 3284
BtgI CCRYGG 2 cut(s) 2733, 2839
BtgZI GCGATG 1 cut(s) 3614
BtsI GCAGTG 1 cut(s) 731
BtsIMutI CAGTG 7 cut(s) 151, 731, 773, 2112, 2320, 2336, 3341
BveI ACCTGC 1 cut(s) 850
Cac8I GCNNGC 7 cut(s) 184, 188, 373, 1796, 1883, 1903, 1985
CciI TCATGA 1 cut(s) 97
CfoI GCGC 2 cut(s) 928, 1457
Cfr10I RCCGGY 3 cut(s) 280, 1457, 1465
Cfr13I GGNCC 4 cut(s) 1491, 1492, 1777, 3242
CseI GACGC 4 cut(s) 377, 1536, 1814, 3614
Csp6I GTAC 6 cut(s) 644, 2410, 2421, 2721, 3074, 3481
CspAI ACCGGT 2 cut(s) 280, 1465
CspCI CAANNNNNGTGG 4 cut(s) 934, 969, 3123, 3158
CviQI GTAC 6 cut(s) 644, 2410, 2421, 2721, 3074, 3481
DraI TTTAAA 3 cut(s) 741, 859, 1117
DraIII CACNNNGTG 1 cut(s) 552
EaeI YGGCCR 2 cut(s) 1922, 3282
Eam1104I CTCTTC 6 cut(s) 312, 547, 650, 1208, 1316, 3320
EarI CTCTTC 6 cut(s) 312, 547, 650, 1208, 1316, 3320
Ecl136II GAGCTC 1 cut(s) 2478
Eco130I CCWWGG 2 cut(s) 198, 2733
Eco24I GRGCYC 2 cut(s) 1495, 2480
Eco32I GATATC 4 cut(s) 650, 1678, 2056, 2382
Eco47I GGWCC 1 cut(s) 3242
Eco53kI GAGCTC 1 cut(s) 2478
Eco57I CTGAAG 7 cut(s) 340, 1587, 1830, 2394, 2614, 3005, 3062
Eco72I CACGTG 1 cut(s) 3254
Eco88I CYCGRG 1 cut(s) 1749
EcoICRI GAGCTC 1 cut(s) 2478
EcoO109I RGGNCCY 3 cut(s) 1491, 1492, 1777
EcoRI GAATTC 2 cut(s) 606, 1239
EcoRII CCWGG 3 cut(s) 2973, 3013, 3303
EcoRV GATATC 4 cut(s) 650, 1678, 2056, 2382
EcoT14I CCWWGG 2 cut(s) 198, 2733
EcoT22I ATGCAT 4 cut(s) 73, 587, 1595, 1836
EcoT38I GRGCYC 2 cut(s) 1495, 2480
ErhI CCWWGG 2 cut(s) 198, 2733
Esp3I CGTCTC 1 cut(s) 1554
FaqI GGGAC 1 cut(s) 2444
FauI CCCGC 1 cut(s) 1878
FauNDI CATATG 1 cut(s) 3233
FbaI TGATCA 1 cut(s) 88
FblI GTMKAC 2 cut(s) 960, 1462
FriOI GRGCYC 2 cut(s) 1495, 2480
FspBI CTAG 5 cut(s) 128, 1742, 1791, 2595, 3215
GlaI GCGC 2 cut(s) 927, 1456
GsaI CCCAGC 2 cut(s) 1112, 3657
GsuI CTGGAG 3 cut(s) 2000, 2455, 3046
HaeIII GGCC 6 cut(s) 944, 1493, 1778, 1881, 1924, 3284
HapII CCGG 5 cut(s) 281, 1458, 1466, 2688, 3176
HgaI GACGC 4 cut(s) 377, 1536, 1814, 3614
HhaI GCGC 2 cut(s) 928, 1457
Hin6I GCGC 2 cut(s) 926, 1455
HinP1I GCGC 2 cut(s) 926, 1455
HindIII AAGCTT 3 cut(s) 2163, 2225, 3356
HpaII CCGG 5 cut(s) 281, 1458, 1466, 2688, 3176
HphI GGTGA 6 cut(s) 173, 1006, 1783, 1906, 1981, 3014
Hpy166II GTNNAC 5 cut(s) 961, 1463, 1972, 2626, 2761
Hpy8I GTNNAC 5 cut(s) 961, 1463, 1972, 2626, 2761
Hpy99I CGWCG 1 cut(s) 1539
HpyCH4III ACNGT 7 cut(s) 2409, 2720, 2793, 2840, 3078, 3364, 3433
HpyCH4IV ACGT 4 cut(s) 573, 2353, 3253, 3457
HpyF10VI GCNNNNNNNGC 1 cut(s) 1478
HpySE526I ACGT 4 cut(s) 573, 2353, 3253, 3457
HspAI GCGC 2 cut(s) 926, 1455
Ksp22I TGATCA 1 cut(s) 88
LguI GCTCTTC 2 cut(s) 650, 1316
LmnI GCTCC 4 cut(s) 207, 328, 1007, 1371
MaeI CTAG 5 cut(s) 128, 1742, 1791, 2595, 3215
MaeII ACGT 4 cut(s) 573, 2353, 3253, 3457
MaeIII GTNAC 5 cut(s) 104, 221, 233, 2816, 2847
MfeI CAATTG 3 cut(s) 1683, 2285, 3347
MflI RGATCY 8 cut(s) 631, 1145, 1185, 1409, 2101, 2702, 3017, 3211
MhlI GDGCHC 3 cut(s) 1012, 1495, 2480
MlsI TGGCCA 2 cut(s) 1924, 3284
MluNI TGGCCA 2 cut(s) 1924, 3284
MlyI GAGTC 4 cut(s) 665, 966, 3037, 3262
MmeI TCCRAC 4 cut(s) 243, 958, 2931, 3363
Mox20I TGGCCA 2 cut(s) 1924, 3284
Mph1103I ATGCAT 4 cut(s) 73, 587, 1595, 1836
MscI TGGCCA 2 cut(s) 1924, 3284
MslI CAYNNNNRTG 2 cut(s) 2732, 2825
Msp20I TGGCCA 2 cut(s) 1924, 3284
MspA1I CMGCKG 3 cut(s) 21, 1885, 2649
MspI CCGG 5 cut(s) 281, 1458, 1466, 2688, 3176
MspR9I CCNGG 3 cut(s) 2975, 3015, 3305
MunI CAATTG 3 cut(s) 1683, 2285, 3347
Mva1269I GAATGC 7 cut(s) 32, 587, 928, 1402, 1457, 2556, 2914
MvaI CCWGG 3 cut(s) 2975, 3015, 3305
MvnI CGCG 1 cut(s) 3633
MwoI GCNNNNNNNGC 1 cut(s) 1478
NcoI CCATGG 1 cut(s) 2733
NdeI CATATG 1 cut(s) 3233
NlaIV GGNNCC 5 cut(s) 633, 1187, 1493, 2740, 3602
NmuCI GTSAC 1 cut(s) 233
NsiI ATGCAT 4 cut(s) 73, 587, 1595, 1836
NspI RCATGY 3 cut(s) 127, 2416, 2922
PagI TCATGA 1 cut(s) 97
PciI ACATGT 1 cut(s) 2918
PciSI GCTCTTC 2 cut(s) 650, 1316
PctI GAATGC 7 cut(s) 32, 587, 928, 1402, 1457, 2556, 2914
PflMI CCANNNNNTGG 1 cut(s) 1999
PinAI ACCGGT 2 cut(s) 280, 1465
Ple19I CGATCG 1 cut(s) 403
PleI GAGTC 4 cut(s) 665, 965, 3036, 3262
PmaCI CACGTG 1 cut(s) 3254
PmlI CACGTG 1 cut(s) 3254
PpsI GAGTC 4 cut(s) 665, 965, 3036, 3262
Ppu21I YACGTR 1 cut(s) 3254
PscI ACATGT 1 cut(s) 2918
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 2480
Psp1406I AACGTT 1 cut(s) 573
Psp6I CCWGG 3 cut(s) 2973, 3013, 3303
PspCI CACGTG 1 cut(s) 3254
PspFI CCCAGC 2 cut(s) 1108, 3653
PspGI CCWGG 3 cut(s) 2973, 3013, 3303
PspN4I GGNNCC 5 cut(s) 633, 1187, 1493, 2740, 3602
PspOMI GGGCCC 1 cut(s) 1491
PspPI GGNCC 4 cut(s) 1491, 1492, 1777, 3242
PstI CTGCAG 4 cut(s) 411, 723, 2807, 3540
PsuI RGATCY 8 cut(s) 631, 1145, 1185, 1409, 2101, 2702, 3017, 3211
PvuI CGATCG 1 cut(s) 403
PvuII CAGCTG 1 cut(s) 2649
RsaI GTAC 6 cut(s) 645, 2411, 2422, 2722, 3075, 3482
RsaNI GTAC 6 cut(s) 644, 2410, 2421, 2721, 3074, 3481
RseI CAYNNNNRTG 2 cut(s) 2732, 2825
SacI GAGCTC 1 cut(s) 2480
SapI GCTCTTC 2 cut(s) 650, 1316
Sau96I GGNCC 4 cut(s) 1491, 1492, 1777, 3242
ScaI AGTACT 1 cut(s) 2722
SchI GAGTC 4 cut(s) 665, 966, 3037, 3262
ScrFI CCNGG 3 cut(s) 2975, 3015, 3305
SduI GDGCHC 3 cut(s) 1012, 1495, 2480
SfcI CTRYAG 6 cut(s) 407, 719, 2789, 2803, 3363, 3536
SinI GGWCC 1 cut(s) 3242
SmiMI CAYNNNNRTG 2 cut(s) 2732, 2825
SmlI CTYRAG 3 cut(s) 851, 2228, 2893
SmoI CTYRAG 3 cut(s) 851, 2228, 2893
SsiI CCGC 4 cut(s) 21, 1885, 2110, 2132
SspI AATATT 2 cut(s) 2446, 2518
SspMI CTAG 5 cut(s) 128, 1742, 1791, 2595, 3215
SstI GAGCTC 1 cut(s) 2480
StyD4I CCNGG 3 cut(s) 2973, 3013, 3303
StyI CCWWGG 2 cut(s) 198, 2733
TaaI ACNGT 7 cut(s) 2409, 2720, 2793, 2840, 3078, 3364, 3433
TaiI ACGT 4 cut(s) 576, 2356, 3256, 3460
TaqI TCGA 5 cut(s) 38, 403, 1498, 1534, 3396
TatI WGTACW 5 cut(s) 2409, 2420, 2720, 3073, 3480
TauI GCSGC 2 cut(s) 24, 2112
TscAI CASTG 7 cut(s) 158, 731, 780, 2119, 2320, 2343, 3341
TseFI GTSAC 1 cut(s) 233
Tsp45I GTSAC 1 cut(s) 233
TspGWI ACGGA 3 cut(s) 978, 1530, 1833
TspRI CASTG 7 cut(s) 158, 731, 780, 2119, 2320, 2343, 3341
Van91I CCANNNNNTGG 1 cut(s) 1999
VpaK11BI GGWCC 1 cut(s) 3242
XbaI TCTAGA 1 cut(s) 3214
XceI RCATGY 3 cut(s) 127, 2416, 2922
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XmiI GTMKAC 2 cut(s) 960, 1462
XspI CTAG 5 cut(s) 128, 1742, 1791, 2595, 3215
ZrmI AGTACT 1 cut(s) 2722
Zsp2I ATGCAT 4 cut(s) 73, 587, 1595, 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.