Rmu_sc0003069.1_g000020

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003069.1
OG0000085
Physical Location & Seq
Reverse (-)
104611 .. 107133
2523 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003069.1_g000020.1.cds

Sequence Viewer

Length: 2523 bp
atgctgggctttgaactcaaggagaagacagaaattataagagcccgtgaattgaagaagaaaataatgagaggaaccaggatcctcataatcttggatgacatttggaagagaatagagttttcagacattggaattcagagccacaacgatcttcaaagatgcaattccaaagttctactgaccaccagaaatttgagtgtttgccgttccatggattgccatgcaaacatacgtctcaatatcttatcagaagaagattctcggagcttatttgtgaaggaagcaaggaagtaccctcttgacaaatcatccaatttctatgatgtagcgagtgaggtggctagagaatgcgctggtctacctattgctttgatagcagttgcgagggcccttcgaggtgaaggtttggacagatggaaagaagctgctcgacgactaaaagcgtctcaaccccctgtccttgaagctgaggaagatgtgttcaaatgcataaagttaagctatgattacttgaaatctgatgtttcgaaatcatgcttcttgctttgctgcctgttccctgaagattatgatatcccaattgaatacttgctcaattatggaattgggaaaggaatgtttcaagattctgacatgctagacgcccgcgccacaacaaattcagcagtgaaagcccttaaagagtctagcttgcttttggactctagacatgacgtatgtgtaaggatgcatgatgtcattcgggatatggcaatattgatatcattatctgaagacggcccgcggttcttggtgaaagttggctgtgaattgaagaattggccaaggattgatgcacgtaagggctactctgcaatctcactaatgaagaacaaaatttgcaagctacccgaagagttggtatgttcaaatctccagattttattactgcaagacaatgcttcattaaatgatatccctaactctttcttccaaaatcagaaagaattaagagtcttggatcttagccgcactggtatttcattactaccccaatcaatcagtttcctaaccaaccttcaagctttgtatttagattactgcaagaacataattgacatttctgtaatcggaaaacttaacatgcttgagattcttagtatgagaggaaatgctctgaaagaattgccaagagaaataggacagttgacctgtctaaggatgctggatatcactagagctgatagattccttttcacatccacgaatggatgtattggcacaattccatctaaagtgatatcaaagttgcataaattagaagaactggacatgcaatgtggattttgggagtgggggagtaaaattgatggagaaggagaagaaactaatattggctttgatgaattagttggtttatcatatttaagcattttgaaagtttggatgtcagatgtaaattgcatccctataagtgttgaggtcgaaccgaattgggtttactttgatattactatttgcagcaacagttatttcacttcgaacagtcaatctggtcataattgtagatccttgagttttaatggaactgacactaccataggaatctgtccggactggtttgtcaacgctgtggtaaagaatactgagaggctactttatagttactgcaaagggttaagtaacattcttgtggaatatgactgtggaaggttacatggattgaaagttctctctgtaattggttgcggtgagaacttgaaagaattgatgaatgcaataacatgtgttctagatatgcctgtgtttgagaatttggaagagttgtatctggaatacctggattacttgaagcagttatgtgttggtgagttaccaccaggatctctctgcagtctgaaattattgaaggtccttaagtgtcctatcttggggaatgtactgttgccatctaaattgttgcagcagctaccaaaactggaaaaactaatctgtgagtcaagtgaagtggaacatgtgtttggatgtgaaggttttgagccagatcaaacaaatctgagagagatggatttacggtatctaaatgtcgtaacaagcatatgtaatggtcctgctccacatggaatgttccaggctctaaagaaattggtcattcgtaattgcaacttccagggaagcctcttcacatttgatgtagctcagtgtctttttcaattggaagaccttattgtatccgaatgccctgtcttggaaagagtaattgaagaaaggagggaaacattgaccaacaagaagaccattcttccaaaattgaagaacctagctttggaagatcttccaatgttgtacaagggaagtgctactattgattttgagtgtccttcattggaaaaactgagtctgtttggctgcccccacttgtcatttccatcctctgcttctgactacttccgcagcaggaaccaagtcgttttcaatgatgctcctcgtcattctctgctactcagcaaactagggtataagtatgtcgctgggtcataa

Protein Analysis

840

Amino Acids

94.99

Weight (kDa)

5.8

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 38
AasI GACNNNNNNGTC 1 cut(s) 1604
AccI GTMKAC 1 cut(s) 361
AccII CGCG 2 cut(s) 651, 787
AccIII TCCGGA 1 cut(s) 1594
AciI CCGC 6 cut(s) 649, 785, 787, 1012, 1731, 2434
AclWI GGATC 5 cut(s) 76, 89, 1011, 1545, 1873
AcoI YGGCCR 1 cut(s) 824
AcsI RAATTY 5 cut(s) 135, 193, 661, 879, 1795
AcuI CTGAAG 2 cut(s) 585, 795
AcyI GRCGYC 1 cut(s) 645
AfaI GTAC 3 cut(s) 296, 1923, 2330
AfiI CCNNNNNNNGG 5 cut(s) 214, 1200, 1913, 2230, 2308
AflII CTTAAG 1 cut(s) 1898
AflIII ACRYGT 2 cut(s) 1766, 1996
AjnI CCWGG 5 cut(s) 77, 1821, 1861, 2112, 2151
AjuI GAANNNNNNNTTGG 6 cut(s) 1359, 1391, 1986, 2018, 2291, 2323
AloI GAACNNNNNNTCC 4 cut(s) 467, 499, 1695, 1727
Alw26I GTCTC 2 cut(s) 242, 453
AlwI GGATC 5 cut(s) 76, 89, 1011, 1545, 1873
Aor13HI TCCGGA 1 cut(s) 1594
AoxI GGCC 3 cut(s) 390, 781, 824
ApaI GGGCCC 1 cut(s) 394
ApeKI GCWGC 7 cut(s) 428, 552, 1503, 1945, 1948, 2391, 2436
ApoI RAATTY 5 cut(s) 135, 193, 661, 879, 1795
ArsI GACNNNNNNTTYG 2 cut(s) 2211, 2243
Asp700I GAANNNNTTC 1 cut(s) 2316
AspLEI GCGC 2 cut(s) 356, 653
AspS9I GGNCC 5 cut(s) 390, 391, 782, 1894, 2090
AsuHPI GGTGA 4 cut(s) 413, 808, 1745, 1862
AsuII TTCGAA 2 cut(s) 530, 1523
AvaII GGWCC 2 cut(s) 1894, 2090
BaeGI GKGCMC 1 cut(s) 394
BalI TGGCCA 1 cut(s) 826
BamHI GGATCC 1 cut(s) 81
BanII GRGCYC 2 cut(s) 46, 394
BbsI GAAGAC 4 cut(s) 32, 783, 2208, 2282
BbvCI CCTCAGC 1 cut(s) 471
BbvI GCAGC 7 cut(s) 415, 539, 1515, 1957, 1960, 2378, 2448
BccI CCATC 6 cut(s) 411, 1279, 1346, 1939, 2041, 2419
BceAI ACGGC 2 cut(s) 192, 796
BciT130I CCWGG 5 cut(s) 79, 1823, 1863, 2114, 2153
BciVI GTATCC 1 cut(s) 2224
BcoDI GTCTC 2 cut(s) 242, 453
BfaI CTAG 8 cut(s) 345, 641, 690, 708, 1218, 1775, 2303, 2495
BfmI CTRYAG 1 cut(s) 1873
BfrI CTTAAG 1 cut(s) 1898
BfuI GTATCC 1 cut(s) 2224
BglII AGATCT 1 cut(s) 2314
BisI GCNGC 8 cut(s) 429, 553, 1012, 1504, 1946, 1949, 2392, 2437
BlsI GCNGC 8 cut(s) 430, 554, 1013, 1505, 1947, 1950, 2393, 2438
Bme1390I CCNGG 5 cut(s) 79, 1823, 1863, 2114, 2153
Bme18I GGWCC 2 cut(s) 1894, 2090
BmgT120I GGNCC 5 cut(s) 390, 391, 782, 1894, 2090
BmiI GGNNCC 4 cut(s) 76, 83, 392, 2444
BmrFI CCNGG 5 cut(s) 79, 1823, 1863, 2114, 2153
BmsI GCATC 6 cut(s) 152, 720, 826, 1194, 1455, 2452
BpiI GAAGAC 4 cut(s) 32, 783, 2208, 2282
BpmI CTGGAG 1 cut(s) 902
Bpu10I CCTNAGC 1 cut(s) 471
Bpu14I TTCGAA 2 cut(s) 530, 1523
BpuEI CTTGAG 2 cut(s) 1151, 1576
BsaAI YACGTR 1 cut(s) 842
BsaHI GRCGYC 1 cut(s) 645
BsaJI CCNNGG 4 cut(s) 213, 785, 827, 2152
BsaWI WCCGGW 1 cut(s) 1594
Bsc4I CCNNNNNNNGG 5 cut(s) 214, 1200, 1913, 2230, 2308
Bse1I ACTGG 4 cut(s) 1021, 1314, 1604, 1965
Bse3DI GCAATG 1 cut(s) 1325
BseAI TCCGGA 1 cut(s) 1594
BseBI CCWGG 5 cut(s) 79, 1823, 1863, 2114, 2153
BseDI CCNNGG 4 cut(s) 213, 785, 827, 2152
BseLI CCNNNNNNNGG 5 cut(s) 214, 1200, 1913, 2230, 2308
BseMI GCAATG 1 cut(s) 1325
BseMII CTCAG 6 cut(s) 462, 1620, 2030, 2195, 2369, 2500
BseNI ACTGG 4 cut(s) 1021, 1314, 1604, 1965
BseRI GAGGAG 1 cut(s) 2457
BseSI GKGCMC 1 cut(s) 394
BseXI GCAGC 7 cut(s) 415, 539, 1515, 1957, 1960, 2378, 2448
BseYI CCCAGC 2 cut(s) 4, 2513
Bsh1236I CGCG 2 cut(s) 651, 787
BshFI GGCC 3 cut(s) 392, 783, 826
BsiSI CCGG 1 cut(s) 1595
BslI CCNNNNNNNGG 5 cut(s) 214, 1200, 1913, 2230, 2308
BsmAI GTCTC 2 cut(s) 242, 453
BsmBI CGTCTC 2 cut(s) 242, 453
BsmI GAATGC 3 cut(s) 356, 1762, 2225
BsnI GGCC 3 cut(s) 392, 783, 826
Bsp119I TTCGAA 2 cut(s) 530, 1523
Bsp120I GGGCCC 1 cut(s) 390
Bsp1286I GDGCHC 2 cut(s) 46, 394
Bsp13I TCCGGA 1 cut(s) 1594
Bsp1407I TGTACA 1 cut(s) 2328
Bsp143I GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
Bsp19I CCATGG 1 cut(s) 213
BspACI CCGC 6 cut(s) 649, 785, 787, 1012, 1731, 2434
BspANI GGCC 3 cut(s) 392, 783, 826
BspCNI CTCAG 6 cut(s) 463, 1621, 2031, 2194, 2370, 2499
BspEI TCCGGA 1 cut(s) 1594
BspFNI CGCG 2 cut(s) 651, 787
BspLI GGNNCC 4 cut(s) 76, 83, 392, 2444
BspMAI CTGCAG 1 cut(s) 1877
BspPI GGATC 5 cut(s) 76, 89, 1011, 1545, 1873
BspT104I TTCGAA 2 cut(s) 530, 1523
BspTI CTTAAG 1 cut(s) 1898
BsrDI GCAATG 1 cut(s) 1325
BsrGI TGTACA 1 cut(s) 2328
BsrI ACTGG 4 cut(s) 1021, 1314, 1604, 1965
BssECI CCNNGG 4 cut(s) 213, 785, 827, 2152
BssMI GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
BssNI GRCGYC 1 cut(s) 645
BssT1I CCWWGG 2 cut(s) 213, 827
Bst2UI CCWGG 5 cut(s) 79, 1823, 1863, 2114, 2153
Bst4CI ACNGT 6 cut(s) 1188, 1511, 1529, 1688, 1926, 2058
Bst6I CTCTTC 4 cut(s) 104, 891, 1797, 2168
BstACI GRCGYC 1 cut(s) 645
BstAFI CTTAAG 1 cut(s) 1898
BstAUI TGTACA 1 cut(s) 2328
BstBAI YACGTR 1 cut(s) 842
BstBI TTCGAA 2 cut(s) 530, 1523
BstC8I GCNNGC 4 cut(s) 649, 695, 785, 887
BstDEI CTNAG 9 cut(s) 471, 1007, 1139, 1199, 1629, 2039, 2181, 2378, 2486
BstDSI CCRYGG 2 cut(s) 213, 785
BstENI CCTNNNNNAGG 1 cut(s) 1198
BstFNI CGCG 2 cut(s) 651, 787
BstHHI GCGC 2 cut(s) 356, 653
BstKTI GATC 7 cut(s) 84, 154, 1006, 1553, 1868, 2029, 2317
BstMAI GTCTC 2 cut(s) 242, 453
BstMBI GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
BstMWI GCNNNNNNNGC 2 cut(s) 377, 674
BstNI CCWGG 5 cut(s) 79, 1823, 1863, 2114, 2153
BstNSI RCATGY 5 cut(s) 640, 1129, 1318, 1770, 2000
BstSCI CCNGG 5 cut(s) 77, 1821, 1861, 2112, 2151
BstSFI CTRYAG 1 cut(s) 1873
BstSLI GKGCMC 1 cut(s) 394
BstUI CGCG 2 cut(s) 651, 787
BstV1I GCAGC 7 cut(s) 415, 539, 1515, 1957, 1960, 2378, 2448
BstV2I GAAGAC 4 cut(s) 32, 783, 2208, 2282
BstX2I RGATCY 5 cut(s) 81, 1003, 1550, 1865, 2314
BstYI RGATCY 5 cut(s) 81, 1003, 1550, 1865, 2314
BsuI GTATCC 1 cut(s) 2224
BsuRI GGCC 3 cut(s) 392, 783, 826
BtgI CCRYGG 2 cut(s) 213, 785
BtsI GCAGTG 1 cut(s) 675
BtsIMutI CAGTG 3 cut(s) 675, 1014, 2189
Cac8I GCNNGC 4 cut(s) 649, 695, 785, 887
CfoI GCGC 2 cut(s) 356, 653
Cfr13I GGNCC 5 cut(s) 390, 391, 782, 1894, 2090
Cfr42I CCGCGG 1 cut(s) 788
CseI GACGC 2 cut(s) 435, 653
Csp6I GTAC 3 cut(s) 295, 1922, 2329
CspCI CAANNNNNGTGG 2 cut(s) 1971, 2006
CviQI GTAC 3 cut(s) 295, 1922, 2329
DdeI CTNAG 9 cut(s) 471, 1007, 1139, 1199, 1629, 2039, 2181, 2378, 2486
DpnI GATC 7 cut(s) 83, 153, 1005, 1552, 1867, 2028, 2316
DpnII GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
DrdI GACNNNNNNGTC 1 cut(s) 1604
DseDI GACNNNNNNGTC 1 cut(s) 1604
EaeI YGGCCR 1 cut(s) 824
Eam1104I CTCTTC 4 cut(s) 104, 891, 1797, 2168
EarI CTCTTC 4 cut(s) 104, 891, 1797, 2168
Eco130I CCWWGG 2 cut(s) 213, 827
Eco24I GRGCYC 2 cut(s) 46, 394
Eco32I GATATC 5 cut(s) 577, 765, 958, 1213, 1284
Eco47I GGWCC 2 cut(s) 1894, 2090
Eco57I CTGAAG 2 cut(s) 585, 795
EcoNI CCTNNNNNAGG 1 cut(s) 1198
EcoO109I RGGNCCY 3 cut(s) 390, 391, 1894
EcoRI GAATTC 1 cut(s) 135
EcoRII CCWGG 5 cut(s) 77, 1821, 1861, 2112, 2151
EcoRV GATATC 5 cut(s) 577, 765, 958, 1213, 1284
EcoT14I CCWWGG 2 cut(s) 213, 827
EcoT22I ATGCAT 2 cut(s) 494, 735
EcoT38I GRGCYC 2 cut(s) 46, 394
ErhI CCWWGG 2 cut(s) 213, 827
Esp3I CGTCTC 2 cut(s) 242, 453
FauI CCCGC 2 cut(s) 656, 792
FauNDI CATATG 1 cut(s) 2081
FblI GTMKAC 1 cut(s) 361
Fnu4HI GCNGC 8 cut(s) 429, 553, 1012, 1504, 1946, 1949, 2392, 2437
FriOI GRGCYC 2 cut(s) 46, 394
Fsp4HI GCNGC 8 cut(s) 429, 553, 1012, 1504, 1946, 1949, 2392, 2437
FspBI CTAG 8 cut(s) 345, 641, 690, 708, 1218, 1775, 2303, 2495
GlaI GCGC 2 cut(s) 355, 652
GluI GCNGC 8 cut(s) 429, 553, 1012, 1504, 1946, 1949, 2392, 2437
GsaI CCCAGC 2 cut(s) 8, 2517
GsuI CTGGAG 1 cut(s) 902
HaeIII GGCC 3 cut(s) 392, 783, 826
HapII CCGG 1 cut(s) 1595
HgaI GACGC 2 cut(s) 435, 653
HhaI GCGC 2 cut(s) 356, 653
Hin1I GRCGYC 1 cut(s) 645
Hin6I GCGC 2 cut(s) 354, 651
HinP1I GCGC 2 cut(s) 354, 651
HincII GTYRAC 2 cut(s) 1191, 1609
HindII GTYRAC 2 cut(s) 1191, 1609
HindIII AAGCTT 1 cut(s) 1065
HpaII CCGG 1 cut(s) 1595
HphI GGTGA 4 cut(s) 413, 808, 1745, 1862
Hpy166II GTNNAC 4 cut(s) 362, 1191, 1483, 1609
Hpy188III TCNNGA 8 cut(s) 302, 626, 708, 746, 919, 1595, 1775, 1814
Hpy8I GTNNAC 4 cut(s) 362, 1191, 1483, 1609
Hpy99I CGWCG 1 cut(s) 438
HpyAV CCTTC 9 cut(s) 274, 398, 404, 1070, 1352, 1686, 1885, 2006, 2373
HpyCH4III ACNGT 6 cut(s) 1188, 1511, 1529, 1688, 1926, 2058
HpyCH4IV ACGT 3 cut(s) 235, 717, 841
HpyF10VI GCNNNNNNNGC 2 cut(s) 377, 674
HpyF3I CTNAG 9 cut(s) 471, 1007, 1139, 1199, 1629, 2039, 2181, 2378, 2486
HpySE526I ACGT 3 cut(s) 235, 717, 841
Hsp92I GRCGYC 1 cut(s) 645
HspAI GCGC 2 cut(s) 354, 651
Kpn2I TCCGGA 1 cut(s) 1594
KspI CCGCGG 1 cut(s) 788
Kzo9I GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
LmnI GCTCC 3 cut(s) 267, 2101, 2470
Lsp1109I GCAGC 7 cut(s) 415, 539, 1515, 1957, 1960, 2378, 2448
LweI GCATC 6 cut(s) 152, 720, 826, 1194, 1455, 2452
MaeI CTAG 8 cut(s) 345, 641, 690, 708, 1218, 1775, 2303, 2495
MaeII ACGT 3 cut(s) 235, 717, 841
MaeIII GTNAC 5 cut(s) 1646, 1664, 1695, 1854, 2071
MalI GATC 7 cut(s) 83, 153, 1005, 1552, 1867, 2028, 2316
MboI GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
MfeI CAATTG 2 cut(s) 582, 2195
MflI RGATCY 5 cut(s) 81, 1003, 1550, 1865, 2314
MhlI GDGCHC 2 cut(s) 46, 394
MlsI TGGCCA 1 cut(s) 826
MluNI TGGCCA 1 cut(s) 826
MlyI GAGTC 5 cut(s) 695, 698, 1005, 1988, 2389
Mox20I TGGCCA 1 cut(s) 826
Mph1103I ATGCAT 2 cut(s) 494, 735
MroI TCCGGA 1 cut(s) 1594
MroXI GAANNNNTTC 1 cut(s) 2316
MscI TGGCCA 1 cut(s) 826
MseI TTAA 9 cut(s) 500, 681, 950, 992, 1122, 1409, 1563, 1661, 1899
MslI CAYNNNNRTG 1 cut(s) 1673
Msp20I TGGCCA 1 cut(s) 826
MspA1I CMGCKG 1 cut(s) 787
MspCI CTTAAG 1 cut(s) 1898
MspI CCGG 1 cut(s) 1595
MspR9I CCNGG 5 cut(s) 79, 1823, 1863, 2114, 2153
MunI CAATTG 2 cut(s) 582, 2195
Mva1269I GAATGC 3 cut(s) 356, 1762, 2225
MvaI CCWGG 5 cut(s) 79, 1823, 1863, 2114, 2153
MvnI CGCG 2 cut(s) 651, 787
MwoI GCNNNNNNNGC 2 cut(s) 377, 674
NcoI CCATGG 1 cut(s) 213
NdeI CATATG 1 cut(s) 2081
NdeII GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
NlaIV GGNNCC 4 cut(s) 76, 83, 392, 2444
NsiI ATGCAT 2 cut(s) 494, 735
NspI RCATGY 5 cut(s) 640, 1129, 1318, 1770, 2000
NspV TTCGAA 2 cut(s) 530, 1523
PciI ACATGT 2 cut(s) 1766, 1996
PctI GAATGC 3 cut(s) 356, 1762, 2225
PdmI GAANNNNTTC 1 cut(s) 2316
PfeI GAWTC 5 cut(s) 260, 629, 1135, 1230, 1587
PkrI GCNGC 8 cut(s) 430, 554, 1013, 1505, 1947, 1950, 2393, 2438
PleI GAGTC 5 cut(s) 694, 698, 1004, 1987, 2388
PpsI GAGTC 5 cut(s) 694, 698, 1004, 1987, 2388
Ppu21I YACGTR 1 cut(s) 842
PpuMI RGGWCCY 1 cut(s) 1894
PscI ACATGT 2 cut(s) 1766, 1996
PsiI TTATAA 1 cut(s) 38
Psp5II RGGWCCY 1 cut(s) 1894
Psp6I CCWGG 5 cut(s) 77, 1821, 1861, 2112, 2151
PspFI CCCAGC 2 cut(s) 4, 2513
PspGI CCWGG 5 cut(s) 77, 1821, 1861, 2112, 2151
PspN4I GGNNCC 4 cut(s) 76, 83, 392, 2444
PspOMI GGGCCC 1 cut(s) 390
PspPI GGNCC 5 cut(s) 390, 391, 782, 1894, 2090
PspPPI RGGWCCY 1 cut(s) 1894
PsrI GAACNNNNNNTAC 2 cut(s) 1561, 1593
PstI CTGCAG 1 cut(s) 1877
PsuI RGATCY 5 cut(s) 81, 1003, 1550, 1865, 2314
RsaI GTAC 3 cut(s) 296, 1923, 2330
RsaNI GTAC 3 cut(s) 295, 1922, 2329
RseI CAYNNNNRTG 1 cut(s) 1673
SacII CCGCGG 1 cut(s) 788
SaqAI TTAA 9 cut(s) 500, 681, 950, 992, 1122, 1409, 1563, 1661, 1899
SatI GCNGC 8 cut(s) 429, 553, 1012, 1504, 1946, 1949, 2392, 2437
Sau3AI GATC 7 cut(s) 81, 151, 1003, 1550, 1865, 2026, 2314
Sau96I GGNCC 5 cut(s) 390, 391, 782, 1894, 2090
SchI GAGTC 5 cut(s) 695, 698, 1005, 1988, 2389
ScrFI CCNGG 5 cut(s) 79, 1823, 1863, 2114, 2153
SduI GDGCHC 2 cut(s) 46, 394
SfaNI GCATC 6 cut(s) 152, 720, 826, 1194, 1455, 2452
SfcI CTRYAG 1 cut(s) 1873
Sfr303I CCGCGG 1 cut(s) 788
SfuI TTCGAA 2 cut(s) 530, 1523
SgrBI CCGCGG 1 cut(s) 788
SinI GGWCC 2 cut(s) 1894, 2090
SmiMI CAYNNNNRTG 1 cut(s) 1673
SmlI CTYRAG 4 cut(s) 17, 1130, 1555, 1898
SmoI CTYRAG 4 cut(s) 17, 1130, 1555, 1898
SsiI CCGC 6 cut(s) 649, 785, 787, 1012, 1731, 2434
SspI AATATT 2 cut(s) 759, 1375
SspMI CTAG 8 cut(s) 345, 641, 690, 708, 1218, 1775, 2303, 2495
StyD4I CCNGG 5 cut(s) 77, 1821, 1861, 2112, 2151
StyI CCWWGG 2 cut(s) 213, 827
TaaI ACNGT 6 cut(s) 1188, 1511, 1529, 1688, 1926, 2058
TaiI ACGT 3 cut(s) 238, 720, 844
TaqI TCGA 5 cut(s) 397, 433, 530, 1467, 1523
TatI WGTACW 2 cut(s) 1921, 2328
TauI GCSGC 1 cut(s) 1014
TfiI GAWTC 5 cut(s) 260, 629, 1135, 1230, 1587
Tru1I TTAA 9 cut(s) 500, 681, 950, 992, 1122, 1409, 1563, 1661, 1899
Tru9I TTAA 9 cut(s) 500, 681, 950, 992, 1122, 1409, 1563, 1661, 1899
TscAI CASTG 3 cut(s) 675, 1021, 2189
TseI GCWGC 7 cut(s) 428, 552, 1503, 1945, 1948, 2391, 2436
TspDTI ATGAA 6 cut(s) 884, 936, 1014, 1401, 1769, 2355
TspRI CASTG 3 cut(s) 675, 1021, 2189
Vha464I CTTAAG 1 cut(s) 1898
VpaK11BI GGWCC 2 cut(s) 1894, 2090
XagI CCTNNNNNAGG 1 cut(s) 1198
XapI RAATTY 5 cut(s) 135, 193, 661, 879, 1795
XbaI TCTAGA 2 cut(s) 707, 1774
XceI RCATGY 5 cut(s) 640, 1129, 1318, 1770, 2000
XmiI GTMKAC 1 cut(s) 361
XmnI GAANNNNTTC 1 cut(s) 2316
XspI CTAG 8 cut(s) 345, 641, 690, 708, 1218, 1775, 2303, 2495
Zsp2I ATGCAT 2 cut(s) 494, 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.