Rorug05G0363100

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Reverse (-)
48162067 .. 48167827
5761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0363100.1

Sequence Viewer

Length: 1107 bp
ATGATCGGGAGAAAAAGTATTGGACGCGTATCACCAATACTTTTGGTGCTTTTGGCACTTGGGTTTTCCTTTGCTACATATAACTTGCTAAGCATAGTAATACACAACAAAGCTTCCTACTCGGCGCTTTTGCTGGCAGATGAATCAGAATTATTAAAAGAACCAGTTATTTGGAGGGCCGAAAACGCAAGGAGAGCAGGAAATTTGAACTCAAAGTTTCATGTTGCGCTTACAGCCACTGATGCTCCCTATAGCCAATGGCAGTCTCGAATTATGTATTACTGGTACAAAAAGGTACAAGGCATGCCTGGATCGGATATGGGAAATTTCACTCGAGTTTTACATTCCGGAAATGCTGACAATTTGATGGATGAGATTCCAACTGTTGTCGTTGATCCACTCCCAGAAGGCTTGGATCAGGGCTATATTGTCCTAAATAGACCATGGGCTTTTGTGCAGTGGCTGGAGAAAGCAACAATCGAGGAAGAATACATTCTAATGGCCGAACCTGACCATATATTTGTAAATCCTTTGCCCAACTTGGCACATGGAAATAGTCCAGCAGGATTTCCATTTTTCTACATTAAACCAGCTGAAAATGCAAGAATAATTAGGAAATTTTATCCCAAGGAAAAAGGTCCTGTGACTGATGTTGATCCAATTGGCAATTCTCCTGTAATCATAAAGAAGTCCTTGCTGGAAGAAATTGCTCCCACATGGGTGAACATTTCTTTGAGAATGAAGGATGACGTAGAGACTGATAAGGCTTTTGGATGGGTGCTTGAGATGTATGCATATGCTGTAGCATCTGCATTGCATGGTGTGCAGCATGTTCTTCGTAAAGACTTTATGCTGCAGCCTCCATGGGATTTGGAAGTTGGGAAGAGGTTCATCATCCATTATACATATGGATGCGACTACAATTTAAAGGGGGAACTGACTTATGGGAAGGTTGGAGAATGGCGTTTTGACAAGAGATCATATCTCAGTGGTCCTCCACCAAGAAACCTCTCCTTGCCCCCTCCAGGAGTCCCTGAAAGTGTGGTAAGGCTTGTGAAGATGGTTAATGAGGCAACTGCCAACATTCCTGGGTGGGACATTGACTAG

Protein Analysis

368

Amino Acids

41.59

Weight (kDa)

6.27

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HPAT PF23452 73 - 366 1.5e-126 Hydroxyproline O-arabinosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 27
AccIII TCCGGA 1 cut(s) 347
AclWI GGATC 4 cut(s) 319, 389, 423, 650
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 3 cut(s) 202, 325, 617
AfaI GTAC 2 cut(s) 287, 297
AfiI CCNNNNNNNGG 1 cut(s) 1025
AflIII ACRYGT 1 cut(s) 25
AgsI TTSAA 1 cut(s) 208
AjnI CCWGG 3 cut(s) 307, 1024, 1087
AjuI GAANNNNNNNTTGG 2 cut(s) 652, 684
AleI CACNNNNGTG 1 cut(s) 719
AluBI AGCT 2 cut(s) 113, 593
AluI AGCT 2 cut(s) 113, 593
Alw26I GTCTC 2 cut(s) 270, 749
AlwI GGATC 4 cut(s) 319, 389, 423, 650
AlwNI CAGNNNCTG 2 cut(s) 239, 463
Ama87I CYCGRG 1 cut(s) 333
Aor13HI TCCGGA 1 cut(s) 347
AoxI GGCC 2 cut(s) 177, 501
ApeKI GCWGC 3 cut(s) 826, 853, 856
ApoI RAATTY 3 cut(s) 202, 325, 617
ArsI GACNNNNNNTTYG 2 cut(s) 503, 535
Asp700I GAANNNNTTC 2 cut(s) 492, 887
AspLEI GCGC 2 cut(s) 127, 229
AspS9I GGNCC 3 cut(s) 177, 638, 992
AsuHPI GGTGA 2 cut(s) 24, 733
AvaI CYCGRG 1 cut(s) 333
AvaII GGWCC 2 cut(s) 638, 992
BbvI GCAGC 3 cut(s) 838, 840, 868
BccI CCATC 3 cut(s) 361, 768, 1054
BcgI CGANNNNNNTGC 2 cut(s) 818, 852
BciT130I CCWGG 3 cut(s) 309, 1026, 1089
BcoDI GTCTC 2 cut(s) 270, 749
BfaI CTAG 1 cut(s) 1105
BfmI CTRYAG 3 cut(s) 250, 801, 854
BfoI RGCGCY 1 cut(s) 128
BisI GCNGC 3 cut(s) 827, 854, 857
BlpI GCTNAGC 1 cut(s) 89
BlsI GCNGC 3 cut(s) 828, 855, 858
Bme1390I CCNGG 3 cut(s) 309, 1026, 1089
Bme18I GGWCC 2 cut(s) 638, 992
BmeT110I CYCGRG 1 cut(s) 333
BmgT120I GGNCC 3 cut(s) 177, 638, 992
BmrFI CCNGG 3 cut(s) 309, 1026, 1089
BmsI GCATC 3 cut(s) 232, 815, 902
BpmI CTGGAG 2 cut(s) 485, 1008
Bpu1102I GCTNAGC 1 cut(s) 89
BpuEI CTTGAG 1 cut(s) 803
BsaBI GATNNNNATC 1 cut(s) 654
BsaJI CCNNGG 4 cut(s) 443, 627, 863, 1088
BsaWI WCCGGW 1 cut(s) 347
BsaXI ACNNNNNCTCC 3 cut(s) 31, 229, 259
Bsc4I CCNNNNNNNGG 1 cut(s) 1025
Bse1I ACTGG 2 cut(s) 164, 287
Bse3DI GCAATG 1 cut(s) 812
Bse8I GATNNNNATC 1 cut(s) 654
BseAI TCCGGA 1 cut(s) 347
BseBI CCWGG 3 cut(s) 309, 1026, 1089
BseDI CCNNGG 4 cut(s) 443, 627, 863, 1088
BseGI GGATG 5 cut(s) 376, 751, 779, 894, 917
BseJI GATNNNNATC 1 cut(s) 654
BseLI CCNNNNNNNGG 1 cut(s) 1025
BseMI GCAATG 1 cut(s) 812
BseMII CTCAG 1 cut(s) 1000
BseNI ACTGG 2 cut(s) 164, 287
BseXI GCAGC 3 cut(s) 838, 840, 868
BsgI GTGCAG 2 cut(s) 476, 845
Bsh1236I CGCG 1 cut(s) 27
BshFI GGCC 2 cut(s) 179, 503
BsiHKCI CYCGRG 1 cut(s) 333
BsiSI CCGG 1 cut(s) 348
BslFI GGGAC 1 cut(s) 1016
BslI CCNNNNNNNGG 1 cut(s) 1025
BsmAI GTCTC 2 cut(s) 270, 749
BsmFI GGGAC 1 cut(s) 1016
BsnI GGCC 2 cut(s) 179, 503
BsoBI CYCGRG 1 cut(s) 333
Bsp13I TCCGGA 1 cut(s) 347
Bsp143I GATC 6 cut(s) 3, 311, 394, 415, 655, 977
Bsp1720I GCTNAGC 1 cut(s) 89
Bsp19I CCATGG 2 cut(s) 443, 863
BspANI GGCC 2 cut(s) 179, 503
BspCNI CTCAG 1 cut(s) 999
BspEI TCCGGA 1 cut(s) 347
BspFNI CGCG 1 cut(s) 27
BspMAI CTGCAG 1 cut(s) 858
BspPI GGATC 4 cut(s) 319, 389, 423, 650
BsrDI GCAATG 1 cut(s) 812
BsrI ACTGG 2 cut(s) 164, 287
BssECI CCNNGG 4 cut(s) 443, 627, 863, 1088
BssMI GATC 6 cut(s) 3, 311, 394, 415, 655, 977
BssT1I CCWWGG 3 cut(s) 443, 627, 863
Bst2UI CCWGG 3 cut(s) 309, 1026, 1089
Bst4CI ACNGT 1 cut(s) 385
Bst6I CTCTTC 1 cut(s) 878
BstAPI GCANNNNNTGC 1 cut(s) 823
BstC8I GCNNGC 2 cut(s) 135, 305
BstDEI CTNAG 2 cut(s) 89, 986
BstDSI CCRYGG 2 cut(s) 443, 863
BstF5I GGATG 5 cut(s) 376, 751, 779, 894, 917
BstFNI CGCG 1 cut(s) 27
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 2 cut(s) 127, 229
BstKTI GATC 6 cut(s) 6, 314, 397, 418, 658, 980
BstMAI GTCTC 2 cut(s) 270, 749
BstMBI GATC 6 cut(s) 3, 311, 394, 415, 655, 977
BstMWI GCNNNNNNNGC 6 cut(s) 185, 194, 233, 242, 599, 823
BstNI CCWGG 3 cut(s) 309, 1026, 1089
BstNSI RCATGY 2 cut(s) 307, 833
BstSCI CCNGG 3 cut(s) 307, 1024, 1087
BstSFI CTRYAG 3 cut(s) 250, 801, 854
BstUI CGCG 1 cut(s) 27
BstV1I GCAGC 3 cut(s) 838, 840, 868
BstXI CCANNNNNNTGG 1 cut(s) 171
BsuRI GGCC 2 cut(s) 179, 503
BtgI CCRYGG 2 cut(s) 443, 863
BtsCI GGATG 5 cut(s) 376, 751, 779, 894, 917
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 3 cut(s) 237, 464, 994
Cac8I GCNNGC 2 cut(s) 135, 305
CaiI CAGNNNCTG 2 cut(s) 239, 463
CfoI GCGC 2 cut(s) 127, 229
Cfr13I GGNCC 3 cut(s) 177, 638, 992
CseI GACGC 1 cut(s) 33
Csp6I GTAC 2 cut(s) 286, 296
CviAII CATG 8 cut(s) 221, 304, 444, 548, 717, 818, 830, 864
CviQI GTAC 2 cut(s) 286, 296
DdeI CTNAG 2 cut(s) 89, 986
DpnI GATC 6 cut(s) 5, 313, 396, 417, 657, 979
DpnII GATC 6 cut(s) 3, 311, 394, 415, 655, 977
DraI TTTAAA 1 cut(s) 927
EaeI YGGCCR 1 cut(s) 501
Eam1104I CTCTTC 1 cut(s) 878
EarI CTCTTC 1 cut(s) 878
Eco130I CCWWGG 3 cut(s) 443, 627, 863
Eco47I GGWCC 2 cut(s) 638, 992
Eco88I CYCGRG 1 cut(s) 333
EcoO109I RGGNCCY 1 cut(s) 638
EcoRII CCWGG 3 cut(s) 307, 1024, 1087
EcoT14I CCWWGG 3 cut(s) 443, 627, 863
EcoT22I ATGCAT 1 cut(s) 796
ErhI CCWWGG 3 cut(s) 443, 627, 863
FaeI CATG 8 cut(s) 224, 307, 447, 551, 720, 821, 833, 867
FalI AAGNNNNNCTT 2 cut(s) 677, 709
FaqI GGGAC 1 cut(s) 1016
FatI CATG 8 cut(s) 220, 303, 443, 547, 716, 817, 829, 863
FauNDI CATATG 2 cut(s) 796, 907
Fnu4HI GCNGC 3 cut(s) 827, 854, 857
FokI GGATG 5 cut(s) 383, 758, 786, 881, 924
Fsp4HI GCNGC 3 cut(s) 827, 854, 857
FspBI CTAG 1 cut(s) 1105
GlaI GCGC 2 cut(s) 126, 228
GluI GCNGC 3 cut(s) 827, 854, 857
GsuI CTGGAG 2 cut(s) 485, 1008
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 2 cut(s) 179, 503
HapII CCGG 1 cut(s) 348
HgaI GACGC 1 cut(s) 33
HhaI GCGC 2 cut(s) 127, 229
Hin1II CATG 8 cut(s) 224, 307, 447, 551, 720, 821, 833, 867
Hin6I GCGC 2 cut(s) 125, 227
HinP1I GCGC 2 cut(s) 125, 227
HindIII AAGCTT 1 cut(s) 111
HinfI GANTC 3 cut(s) 143, 376, 1029
HpaII CCGG 1 cut(s) 348
HphI GGTGA 2 cut(s) 24, 733
Hpy166II GTNNAC 1 cut(s) 724
Hpy188I TCNGA 2 cut(s) 148, 316
Hpy188III TCNNGA 3 cut(s) 7, 267, 348
Hpy8I GTNNAC 1 cut(s) 724
HpyAV CCTTC 3 cut(s) 401, 736, 943
HpyCH4III ACNGT 1 cut(s) 385
HpyCH4IV ACGT 1 cut(s) 750
HpyCH4V TGCA 7 cut(s) 457, 602, 794, 812, 817, 826, 856
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 194, 233, 242, 599, 823
HpyF3I CTNAG 2 cut(s) 89, 986
HpySE526I ACGT 1 cut(s) 750
Hsp92II CATG 8 cut(s) 224, 307, 447, 551, 720, 821, 833, 867
HspAI GCGC 2 cut(s) 125, 227
Kpn2I TCCGGA 1 cut(s) 347
Kzo9I GATC 6 cut(s) 3, 311, 394, 415, 655, 977
LmnI GCTCC 2 cut(s) 250, 715
Lsp1109I GCAGC 3 cut(s) 838, 840, 868
LweI GCATC 3 cut(s) 232, 815, 902
MaeI CTAG 1 cut(s) 1105
MaeII ACGT 1 cut(s) 750
MaeIII GTNAC 1 cut(s) 643
MalI GATC 6 cut(s) 5, 313, 396, 417, 657, 979
MboI GATC 6 cut(s) 3, 311, 394, 415, 655, 977
MboII GAAGA 5 cut(s) 497, 713, 827, 895, 1069
MfeI CAATTG 1 cut(s) 660
MluI ACGCGT 1 cut(s) 25
MlyI GAGTC 1 cut(s) 1038
MmeI TCCRAC 2 cut(s) 404, 934
MnlI CCTC 8 cut(s) 168, 475, 870, 879, 1005, 1019, 1032, 1063
Mph1103I ATGCAT 1 cut(s) 796
MroI TCCGGA 1 cut(s) 347
MroXI GAANNNNTTC 2 cut(s) 492, 887
MseI TTAA 4 cut(s) 155, 585, 926, 1065
MslI CAYNNNNRTG 3 cut(s) 497, 719, 910
MspA1I CMGCKG 1 cut(s) 593
MspI CCGG 1 cut(s) 348
MspR9I CCNGG 3 cut(s) 309, 1026, 1089
MunI CAATTG 1 cut(s) 660
MvaI CCWGG 3 cut(s) 309, 1026, 1089
MvnI CGCG 1 cut(s) 27
MwoI GCNNNNNNNGC 6 cut(s) 185, 194, 233, 242, 599, 823
NcoI CCATGG 2 cut(s) 443, 863
NdeI CATATG 2 cut(s) 796, 907
NdeII GATC 6 cut(s) 3, 311, 394, 415, 655, 977
NlaIII CATG 8 cut(s) 224, 307, 447, 551, 720, 821, 833, 867
NmeAIII GCCGAG 1 cut(s) 101
NmuCI GTSAC 1 cut(s) 643
NsiI ATGCAT 1 cut(s) 796
NspI RCATGY 2 cut(s) 307, 833
OliI CACNNNNGTG 1 cut(s) 719
PaeI GCATGC 1 cut(s) 307
PaeR7I CTCGAG 1 cut(s) 333
PdmI GAANNNNTTC 2 cut(s) 492, 887
PfeI GAWTC 2 cut(s) 143, 376
PfoI TCCNGGA 1 cut(s) 1024
PkrI GCNGC 3 cut(s) 828, 855, 858
PleI GAGTC 1 cut(s) 1037
PpsI GAGTC 1 cut(s) 1037
PpuMI RGGWCCY 1 cut(s) 638
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 3 cut(s) 307, 1024, 1087
PspGI CCWGG 3 cut(s) 307, 1024, 1087
PspPI GGNCC 3 cut(s) 177, 638, 992
PspPPI RGGWCCY 1 cut(s) 638
PspXI VCTCGAGB 1 cut(s) 333
PstI CTGCAG 1 cut(s) 858
PstNI CAGNNNCTG 2 cut(s) 239, 463
PvuII CAGCTG 1 cut(s) 593
RsaI GTAC 2 cut(s) 287, 297
RsaNI GTAC 2 cut(s) 286, 296
RseI CAYNNNNRTG 3 cut(s) 497, 719, 910
SaqAI TTAA 4 cut(s) 155, 585, 926, 1065
SatI GCNGC 3 cut(s) 827, 854, 857
Sau3AI GATC 6 cut(s) 3, 311, 394, 415, 655, 977
Sau96I GGNCC 3 cut(s) 177, 638, 992
SchI GAGTC 1 cut(s) 1038
ScrFI CCNGG 3 cut(s) 309, 1026, 1089
SetI ASST 9 cut(s) 115, 297, 511, 595, 640, 753, 890, 954, 1011
SfaNI GCATC 3 cut(s) 232, 815, 902
SfcI CTRYAG 3 cut(s) 250, 801, 854
Sfr274I CTCGAG 1 cut(s) 333
SinI GGWCC 2 cut(s) 638, 992
SlaI CTCGAG 1 cut(s) 333
SmiMI CAYNNNNRTG 3 cut(s) 497, 719, 910
SmlI CTYRAG 2 cut(s) 333, 782
SmoI CTYRAG 2 cut(s) 333, 782
SphI GCATGC 1 cut(s) 307
SspMI CTAG 1 cut(s) 1105
StyD4I CCNGG 3 cut(s) 307, 1024, 1087
StyI CCWWGG 3 cut(s) 443, 627, 863
TaaI ACNGT 1 cut(s) 385
TaiI ACGT 1 cut(s) 753
TaqI TCGA 3 cut(s) 268, 334, 480
TfiI GAWTC 2 cut(s) 143, 376
Tru1I TTAA 4 cut(s) 155, 585, 926, 1065
Tru9I TTAA 4 cut(s) 155, 585, 926, 1065
TscAI CASTG 3 cut(s) 244, 464, 994
TseFI GTSAC 1 cut(s) 643
TseI GCWGC 3 cut(s) 826, 853, 856
Tsp45I GTSAC 1 cut(s) 643
TspDTI ATGAA 4 cut(s) 156, 209, 755, 880
TspRI CASTG 3 cut(s) 244, 464, 994
VpaK11BI GGWCC 2 cut(s) 638, 992
XapI RAATTY 3 cut(s) 202, 325, 617
XceI RCATGY 2 cut(s) 307, 833
XcmI CCANNNNNNNNNTGG 1 cut(s) 905
XhoI CTCGAG 1 cut(s) 333
XmnI GAANNNNTTC 2 cut(s) 492, 887
XspI CTAG 1 cut(s) 1105
Zsp2I ATGCAT 1 cut(s) 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.