RchiOBHm_Chr1g0353711

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000085
Physical Location & Seq
Forward (+)
46879263 .. 46881375
2113 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57933

Sequence Viewer

Length: 1806 bp
ATGGTGGTCACATACCTTAAGAATTCAAGCTTGCTTTTAGATAGTGGCAAAGAACTATGTGTAAGGATGCATGATGTCGTTCGGGATACAACCATGAAAATTGCACTATCTGAAGATGGTCACGGGTTTTTTGTAAAAGCTGGCCGCAGTTTGGAGGATTGGCCACGTCAATTACAAGAAGGCTACTCTGCGGTCTCACTAATGGGGAATGAAATCCGCACACTACCAGAAGAGTTGGTATGTCCAAAACTCCAGGTTTTATTACTACAAGATAATTGCCATATAGAAAAGTTCCCAGAGGCCTTCTTTCAAAGTTCCAATGAACTAAGGGTCTTAAATCTTAGCAACACTTGCATTTTATTACTACCCCAATCATTCAGTCTTCTAGCCAACCTCCAAGTTTTGCATTTAGATGATTTGAAGATCATAACTGACATTTCCATGCTTGGAAAACTGAAAAAACTTGAGATCCTTAGTATGAGAGAATCACACATTGGGGAATTTCCAAAAGAAATAGGAGATTTAACCAATCTAAGGATGTTGGATTTGACTGGTGGACATATTGTCACAATTCCATCAAAAGTTTTTTCAAAGTTGCATAAACTAGAAGAACTGTACATGCAATGTGGGTTTTGGGACTGGGGGAGTGAAGTTGAGGGAGGAGGAGGAGAAACCAATGCTGGCTTTGATGAGTTGACTAGTTTGCCATATTTAAGAGTTTTGAAGGTTTGGATCTCCCATGCAAATTGTATCCCTAAAAATGTTGAACTCAACCCGAATTGGGTTGAGTTTGATATATGTATTGGAAGAGATGACGAGACGGTGGTCTCTCAATATTGTTATAATTCAGTATGCTTGACACTTGACACAGCCATCAGCACATTACCGGATTGGTTTGTCTTTGTGGTAATAAACAAAGCAGAGAAGCTAGAGTGGGTAGAGTGCAAAGGGTTGATTGATTTTTGTGTGGAATATGAGCATAGGAGGTTAGATAGATTGAAGTATCTCTCTATAATTGGGTGCGATGAGAACTTGAAAGAGTTGATGAGCACAACAACATGGGTTCCGAAAGAACCTGTGTTTGAGAACTTGGAAGACTTGCATCTCAGTCGAGTAGATTTCATGAAAGAGTTATGTCTTGGTGATTTACCACAAGGGTCTCTATTCAGTCTCAAGTTACTTGAGGTTGACTCTTGTTATAACTGGGGGAACATACTTTTACCATCAAAATTGTTGCAGAGAGTACGAAATCTGGAAACTCTAATTTGTAATGATGTTGATGGAATGGAATATGTATTTGGATGCGAAGGATTTGAGCCGGAAAAATCAAAATTGATAGACTTGTCATTGAGGAGTTTAAATGCAGTAAGAAGCATATGTAATGGTCCTGCTCCACCTGCAATGTTCCAGACTCTTAAAGTTGTGTCCATTGAACAATGCAGCTTTGTAGGAAGTCTTTTCTCTTATGAGGCAGCTCAGTGTCTGTATCAATTGGAAGACCTTTCAGTTGGCAGTTGCCCTCTTTTGGAAAGAGTGATTGAAGCAAACAAGGAAACAATGAACAAGAAGAAGACCATTTTTCCAAAATTGAAGAACTTAGTTTTGATGAGACTTCCTATGTTGTACAGTGGAAGTGCTACTATTGATTTTGAGTGTCCTTTACTGGAATGCTTGTATTTGAAGGACTGCTCCCAGTTTTTATCTTCAACCTCTGCTTCTGACTTCCACAGTAGGAAAAATGTCCAGTTCAATGATGAGCAACACTACCTGTCTCTATGGGAGAGAATGTGGGGAGACATAATATAA

Protein Analysis

601

Amino Acids

68.47

Weight (kDa)

4.98

Isoelectric Point (pI)

41.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 82 - 138 5.9e-07 Leucine rich repeat
LRR_14 PF23598 145 - 384 2.6e-11 Leucine-rich repeat region
LRR_RPS2 PF23247 364 - 506 4.5e-21 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 446 - 563 1.5e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 843, 1200
AarI CACCTGC 1 cut(s) 1405
Acc36I ACCTGC 1 cut(s) 1405
AciI CCGC 3 cut(s) 145, 191, 217
AclWI GGATC 2 cut(s) 463, 740
AcoI YGGCCR 2 cut(s) 142, 161
AcsI RAATTY 2 cut(s) 22, 500
AcuI CTGAAG 1 cut(s) 132
AfaI GTAC 3 cut(s) 617, 1245, 1625
AfiI CCNNNNNNNGG 4 cut(s) 151, 534, 781, 1525
AflII CTTAAG 1 cut(s) 17
AhdI GACNNNNNGTC 1 cut(s) 563
AhlI ACTAGT 1 cut(s) 698
AjiI CACGTC 1 cut(s) 167
AjnI CCWGG 1 cut(s) 252
AjuI GAANNNNNNNTTGG 4 cut(s) 477, 509, 1281, 1313
AluBI AGCT 5 cut(s) 30, 140, 928, 1443, 1475
AluI AGCT 5 cut(s) 30, 140, 928, 1443, 1475
Alw21I GWGCWC 1 cut(s) 1052
Alw26I GTCTC 8 cut(s) 199, 812, 832, 1164, 1175, 1603, 1776, 1788
AlwI GGATC 2 cut(s) 463, 740
AlwNI CAGNNNCTG 1 cut(s) 1483
AoxI GGCC 3 cut(s) 142, 161, 300
ApeKI GCWGC 2 cut(s) 1440, 1472
ApoI RAATTY 2 cut(s) 22, 500
AspS9I GGNCC 1 cut(s) 1385
AsuHPI GGTGA 1 cut(s) 1154
AvaII GGWCC 1 cut(s) 1385
BalI TGGCCA 1 cut(s) 163
BbsI GAAGAC 4 cut(s) 374, 1101, 1503, 1577
Bbv12I GWGCWC 1 cut(s) 1052
BbvI GCAGC 2 cut(s) 1452, 1484
BccI CCATC 5 cut(s) 110, 583, 881, 1231, 1274
BcgI CGANNNNNNTGC 2 cut(s) 1091, 1125
BciT130I CCWGG 1 cut(s) 254
BciVI GTATCC 2 cut(s) 79, 761
BcoDI GTCTC 8 cut(s) 199, 812, 832, 1164, 1175, 1603, 1776, 1788
BcuI ACTAGT 1 cut(s) 698
BfaI CTAG 4 cut(s) 386, 605, 699, 929
BfrI CTTAAG 1 cut(s) 17
BfuAI ACCTGC 1 cut(s) 1405
BfuI GTATCC 2 cut(s) 79, 761
BisI GCNGC 3 cut(s) 145, 1441, 1473
BlsI GCNGC 3 cut(s) 146, 1442, 1474
Bme1390I CCNGG 1 cut(s) 254
Bme18I GGWCC 1 cut(s) 1385
BmeRI GACNNNNNGTC 1 cut(s) 563
BmgBI CACGTC 1 cut(s) 167
BmgT120I GGNCC 1 cut(s) 1385
BmiI GGNNCC 1 cut(s) 1065
BmrFI CCNGG 1 cut(s) 254
BmrI ACTGGG 3 cut(s) 649, 1213, 1687
BmsI GCATC 3 cut(s) 57, 1111, 1292
BmuI ACTGGG 3 cut(s) 649, 1213, 1687
BoxI GACNNNNGTC 1 cut(s) 824
BpiI GAAGAC 4 cut(s) 374, 1101, 1503, 1577
BplI GAGNNNNNCTC 2 cut(s) 1175, 1207
BpmI CTGGAG 1 cut(s) 236
BpuEI CTTGAG 3 cut(s) 485, 1157, 1202
BsaI GGTCTC 3 cut(s) 199, 832, 1164
BsaWI WCCGGW 1 cut(s) 886
BsaXI ACNNNNNCTCC 2 cut(s) 1772, 1802
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 534, 781, 1525
Bse1I ACTGG 6 cut(s) 556, 644, 1208, 1668, 1693, 1744
Bse3DI GCAATG 2 cut(s) 629, 1407
BseBI CCWGG 1 cut(s) 254
BseGI GGATG 3 cut(s) 72, 543, 1307
BseLI CCNNNNNNNGG 4 cut(s) 151, 534, 781, 1525
BseMI GCAATG 2 cut(s) 629, 1407
BseMII CTCAG 2 cut(s) 1120, 1490
BseNI ACTGG 6 cut(s) 556, 644, 1208, 1668, 1693, 1744
BseRI GAGGAG 4 cut(s) 675, 678, 681, 1366
BseXI GCAGC 2 cut(s) 1452, 1484
BshFI GGCC 3 cut(s) 144, 163, 302
BsiHKAI GWGCWC 1 cut(s) 1052
BsiSI CCGG 2 cut(s) 887, 1319
BslFI GGGAC 1 cut(s) 650
BslI CCNNNNNNNGG 4 cut(s) 151, 534, 781, 1525
BsmAI GTCTC 8 cut(s) 199, 812, 832, 1164, 1175, 1603, 1776, 1788
BsmBI CGTCTC 1 cut(s) 812
BsmFI GGGAC 1 cut(s) 650
BsmI GAATGC 1 cut(s) 1673
BsnI GGCC 3 cut(s) 144, 163, 302
Bso31I GGTCTC 3 cut(s) 199, 832, 1164
Bsp1286I GDGCHC 1 cut(s) 1052
Bsp1407I TGTACA 2 cut(s) 615, 1623
Bsp143I GATC 3 cut(s) 423, 468, 732
BspACI CCGC 3 cut(s) 145, 191, 217
BspANI GGCC 3 cut(s) 144, 163, 302
BspCNI CTCAG 2 cut(s) 1119, 1489
BspHI TCATGA 1 cut(s) 1122
BspLI GGNNCC 1 cut(s) 1065
BspMI ACCTGC 1 cut(s) 1405
BspPI GGATC 2 cut(s) 463, 740
BspTI CTTAAG 1 cut(s) 17
BspTNI GGTCTC 3 cut(s) 199, 832, 1164
BsrDI GCAATG 2 cut(s) 629, 1407
BsrGI TGTACA 2 cut(s) 615, 1623
BsrI ACTGG 6 cut(s) 556, 644, 1208, 1668, 1693, 1744
BssMI GATC 3 cut(s) 423, 468, 732
Bst2UI CCWGG 1 cut(s) 254
Bst4CI ACNGT 4 cut(s) 615, 823, 1628, 1730
Bst6I CTCTTC 2 cut(s) 225, 802
BstAFI CTTAAG 1 cut(s) 17
BstAPI GCANNNNNTGC 1 cut(s) 351
BstAUI TGTACA 2 cut(s) 615, 1623
BstC8I GCNNGC 3 cut(s) 32, 142, 682
BstDEI CTNAG 7 cut(s) 326, 341, 473, 533, 1106, 1476, 1597
BstF5I GGATG 3 cut(s) 72, 543, 1307
BstKTI GATC 3 cut(s) 426, 471, 735
BstMAI GTCTC 8 cut(s) 199, 812, 832, 1164, 1175, 1603, 1776, 1788
BstMBI GATC 3 cut(s) 423, 468, 732
BstMWI GCNNNNNNNGC 2 cut(s) 351, 1397
BstNI CCWGG 1 cut(s) 254
BstNSI RCATGY 1 cut(s) 622
BstPAI GACNNNNGTC 1 cut(s) 824
BstSCI CCNGG 1 cut(s) 252
BstV1I GCAGC 2 cut(s) 1452, 1484
BstV2I GAAGAC 4 cut(s) 374, 1101, 1503, 1577
BstX2I RGATCY 2 cut(s) 468, 732
BstYI RGATCY 2 cut(s) 468, 732
BsuI GTATCC 2 cut(s) 79, 761
BsuRI GGCC 3 cut(s) 144, 163, 302
BtgZI GCGATG 1 cut(s) 1038
BtrI CACGTC 1 cut(s) 167
BtsCI GGATG 3 cut(s) 72, 543, 1307
BtsIMutI CAGTG 2 cut(s) 1484, 1633
BveI ACCTGC 1 cut(s) 1405
Cac8I GCNNGC 3 cut(s) 32, 142, 682
CaiI CAGNNNCTG 1 cut(s) 1483
CciI TCATGA 1 cut(s) 1122
Cfr13I GGNCC 1 cut(s) 1385
Csp6I GTAC 3 cut(s) 616, 1244, 1624
CviAII CATG 7 cut(s) 71, 94, 442, 619, 740, 1059, 1123
CviQI GTAC 3 cut(s) 616, 1244, 1624
DdeI CTNAG 7 cut(s) 326, 341, 473, 533, 1106, 1476, 1597
DpnI GATC 3 cut(s) 425, 470, 734
DpnII GATC 3 cut(s) 423, 468, 732
DraI TTTAAA 1 cut(s) 1359
DriI GACNNNNNGTC 1 cut(s) 563
EaeI YGGCCR 2 cut(s) 142, 161
Eam1104I CTCTTC 2 cut(s) 225, 802
Eam1105I GACNNNNNGTC 1 cut(s) 563
EarI CTCTTC 2 cut(s) 225, 802
Eco147I AGGCCT 1 cut(s) 302
Eco31I GGTCTC 3 cut(s) 199, 832, 1164
Eco47I GGWCC 1 cut(s) 1385
Eco57I CTGAAG 1 cut(s) 132
EcoRI GAATTC 1 cut(s) 22
EcoRII CCWGG 1 cut(s) 252
EcoT22I ATGCAT 1 cut(s) 72
Esp3I CGTCTC 1 cut(s) 812
FaeI CATG 7 cut(s) 74, 97, 445, 622, 743, 1062, 1126
FaqI GGGAC 1 cut(s) 650
FatI CATG 7 cut(s) 70, 93, 441, 618, 739, 1058, 1122
FauNDI CATATG 1 cut(s) 1376
Fnu4HI GCNGC 3 cut(s) 145, 1441, 1473
FokI GGATG 3 cut(s) 79, 550, 1314
Fsp4HI GCNGC 3 cut(s) 145, 1441, 1473
FspBI CTAG 4 cut(s) 386, 605, 699, 929
GluI GCNGC 3 cut(s) 145, 1441, 1473
GsuI CTGGAG 1 cut(s) 236
HaeIII GGCC 3 cut(s) 144, 163, 302
HapII CCGG 2 cut(s) 887, 1319
Hin1II CATG 7 cut(s) 74, 97, 445, 622, 743, 1062, 1126
HincII GTYRAC 2 cut(s) 696, 1189
HindII GTYRAC 2 cut(s) 696, 1189
HindIII AAGCTT 1 cut(s) 28
HinfI GANTC 3 cut(s) 485, 1190, 1411
HpaII CCGG 2 cut(s) 887, 1319
HphI GGTGA 1 cut(s) 1154
Hpy166II GTNNAC 3 cut(s) 557, 696, 1189
Hpy188I TCNGA 3 cut(s) 112, 1068, 1720
Hpy188III TCNNGA 4 cut(s) 83, 1123, 1253, 1408
Hpy8I GTNNAC 3 cut(s) 557, 696, 1189
HpyAV CCTTC 5 cut(s) 173, 313, 718, 1301, 1675
HpyCH4III ACNGT 4 cut(s) 615, 823, 1628, 1730
HpyCH4IV ACGT 1 cut(s) 166
HpyF10VI GCNNNNNNNGC 2 cut(s) 351, 1397
HpyF3I CTNAG 7 cut(s) 326, 341, 473, 533, 1106, 1476, 1597
HpySE526I ACGT 1 cut(s) 166
Hsp92II CATG 7 cut(s) 74, 97, 445, 622, 743, 1062, 1126
Kzo9I GATC 3 cut(s) 423, 468, 732
LmnI GCTCC 2 cut(s) 1396, 1694
Lsp1109I GCAGC 2 cut(s) 1452, 1484
LweI GCATC 3 cut(s) 57, 1111, 1292
MaeI CTAG 4 cut(s) 386, 605, 699, 929
MaeII ACGT 1 cut(s) 166
MaeIII GTNAC 4 cut(s) 7, 119, 565, 1176
MalI GATC 3 cut(s) 425, 470, 734
MboI GATC 3 cut(s) 423, 468, 732
MfeI CAATTG 1 cut(s) 1490
MflI RGATCY 2 cut(s) 468, 732
MhlI GDGCHC 1 cut(s) 1052
MlsI TGGCCA 1 cut(s) 163
MluNI TGGCCA 1 cut(s) 163
MlyI GAGTC 2 cut(s) 1184, 1405
MmeI TCCRAC 1 cut(s) 522
Mox20I TGGCCA 1 cut(s) 163
Mph1103I ATGCAT 1 cut(s) 72
MscI TGGCCA 1 cut(s) 163
MseI TTAA 6 cut(s) 18, 335, 524, 713, 1358, 1416
MslI CAYNNNNRTG 2 cut(s) 411, 440
Msp20I TGGCCA 1 cut(s) 163
MspCI CTTAAG 1 cut(s) 17
MspI CCGG 2 cut(s) 887, 1319
MspR9I CCNGG 1 cut(s) 254
MunI CAATTG 1 cut(s) 1490
Mva1269I GAATGC 1 cut(s) 1673
MvaI CCWGG 1 cut(s) 254
MwoI GCNNNNNNNGC 2 cut(s) 351, 1397
NdeI CATATG 1 cut(s) 1376
NdeII GATC 3 cut(s) 423, 468, 732
NlaIII CATG 7 cut(s) 74, 97, 445, 622, 743, 1062, 1126
NlaIV GGNNCC 1 cut(s) 1065
NmuCI GTSAC 3 cut(s) 7, 119, 565
NsiI ATGCAT 1 cut(s) 72
NspI RCATGY 1 cut(s) 622
PagI TCATGA 1 cut(s) 1122
PaqCI CACCTGC 1 cut(s) 1405
PceI AGGCCT 1 cut(s) 302
PctI GAATGC 1 cut(s) 1673
PfeI GAWTC 1 cut(s) 485
PkrI GCNGC 3 cut(s) 146, 1442, 1474
PleI GAGTC 2 cut(s) 1184, 1405
PpsI GAGTC 2 cut(s) 1184, 1405
PshAI GACNNNNGTC 1 cut(s) 824
PsiI TTATAA 2 cut(s) 843, 1200
Psp6I CCWGG 1 cut(s) 252
PspGI CCWGG 1 cut(s) 252
PspN4I GGNNCC 1 cut(s) 1065
PspPI GGNCC 1 cut(s) 1385
PstNI CAGNNNCTG 1 cut(s) 1483
PsuI RGATCY 2 cut(s) 468, 732
RsaI GTAC 3 cut(s) 617, 1245, 1625
RsaNI GTAC 3 cut(s) 616, 1244, 1624
RseI CAYNNNNRTG 2 cut(s) 411, 440
SaqAI TTAA 6 cut(s) 18, 335, 524, 713, 1358, 1416
SatI GCNGC 3 cut(s) 145, 1441, 1473
Sau3AI GATC 3 cut(s) 423, 468, 732
Sau96I GGNCC 1 cut(s) 1385
SchI GAGTC 2 cut(s) 1184, 1405
ScrFI CCNGG 1 cut(s) 254
SduI GDGCHC 1 cut(s) 1052
SfaNI GCATC 3 cut(s) 57, 1111, 1292
SinI GGWCC 1 cut(s) 1385
SmiMI CAYNNNNRTG 2 cut(s) 411, 440
SmlI CTYRAG 4 cut(s) 17, 464, 1172, 1181
SmoI CTYRAG 4 cut(s) 17, 464, 1172, 1181
SpeI ACTAGT 1 cut(s) 698
SseBI AGGCCT 1 cut(s) 302
SsiI CCGC 3 cut(s) 145, 191, 217
SspI AATATT 1 cut(s) 836
SspMI CTAG 4 cut(s) 386, 605, 699, 929
StuI AGGCCT 1 cut(s) 302
StyD4I CCNGG 1 cut(s) 252
TaaI ACNGT 4 cut(s) 615, 823, 1628, 1730
TaiI ACGT 1 cut(s) 169
TaqI TCGA 1 cut(s) 1111
TatI WGTACW 2 cut(s) 615, 1623
TauI GCSGC 1 cut(s) 147
TfiI GAWTC 1 cut(s) 485
Tru1I TTAA 6 cut(s) 18, 335, 524, 713, 1358, 1416
Tru9I TTAA 6 cut(s) 18, 335, 524, 713, 1358, 1416
TscAI CASTG 2 cut(s) 1484, 1633
TseFI GTSAC 3 cut(s) 7, 119, 565
TseI GCWGC 2 cut(s) 1440, 1472
Tsp45I GTSAC 3 cut(s) 7, 119, 565
TspDTI ATGAA 6 cut(s) 110, 225, 336, 1111, 1139, 1574
TspRI CASTG 2 cut(s) 1484, 1633
Vha464I CTTAAG 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 1385
XapI RAATTY 2 cut(s) 22, 500
XceI RCATGY 1 cut(s) 622
XspI CTAG 4 cut(s) 386, 605, 699, 929
Zsp2I ATGCAT 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.