Disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_RPS2 | PF23247 | 170 - 279 | 1.1e-12 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 224 |
| AccII | CGCG | 1 cut(s) | 582 |
| AciI | CCGC | 1 cut(s) | 580 |
| AclWI | GGATC | 1 cut(s) | 911 |
| AcsI | RAATTY | 2 cut(s) | 275, 848 |
| AfaI | GTAC | 6 cut(s) | 89, 386, 395, 452, 506, 914 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 59, 224, 536, 769 |
| AgsI | TTSAA | 4 cut(s) | 684, 721, 736, 908 |
| AjiI | CACGTC | 1 cut(s) | 868 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 621, 653 |
| AluBI | AGCT | 5 cut(s) | 125, 144, 460, 614, 751 |
| AluI | AGCT | 5 cut(s) | 125, 144, 460, 614, 751 |
| Alw21I | GWGCWC | 3 cut(s) | 348, 659, 762 |
| AlwI | GGATC | 1 cut(s) | 911 |
| Ama87I | CYCGRG | 1 cut(s) | 362 |
| AoxI | GGCC | 1 cut(s) | 12 |
| ApeKI | GCWGC | 1 cut(s) | 576 |
| ApoI | RAATTY | 2 cut(s) | 275, 848 |
| AspLEI | GCGC | 1 cut(s) | 445 |
| AspS9I | GGNCC | 5 cut(s) | 13, 42, 233, 485, 700 |
| AsuHPI | GGTGA | 2 cut(s) | 17, 416 |
| AvaI | CYCGRG | 1 cut(s) | 362 |
| AvaII | GGWCC | 4 cut(s) | 42, 233, 485, 700 |
| BaeGI | GKGCMC | 2 cut(s) | 788, 821 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 368, 385, 401, 418 |
| BbsI | GAAGAC | 2 cut(s) | 535, 734 |
| Bbv12I | GWGCWC | 3 cut(s) | 348, 659, 762 |
| BbvI | GCAGC | 1 cut(s) | 563 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 343, 377, 498, 532 |
| BfaI | CTAG | 3 cut(s) | 380, 534, 704 |
| BfmI | CTRYAG | 1 cut(s) | 118 |
| BisI | GCNGC | 2 cut(s) | 577, 580 |
| BlsI | GCNGC | 2 cut(s) | 578, 581 |
| Bme18I | GGWCC | 4 cut(s) | 42, 233, 485, 700 |
| BmeT110I | CYCGRG | 1 cut(s) | 362 |
| BmgBI | CACGTC | 1 cut(s) | 868 |
| BmgT120I | GGNCC | 5 cut(s) | 13, 42, 233, 485, 700 |
| BmiI | GGNNCC | 3 cut(s) | 44, 235, 486 |
| BmrI | ACTGGG | 2 cut(s) | 121, 168 |
| BmsI | GCATC | 2 cut(s) | 325, 363 |
| BmuI | ACTGGG | 2 cut(s) | 121, 168 |
| BpiI | GAAGAC | 2 cut(s) | 535, 734 |
| BpuEI | CTTGAG | 3 cut(s) | 431, 434, 476 |
| BsaAI | YACGTR | 1 cut(s) | 440 |
| BsaBI | GATNNNNATC | 1 cut(s) | 67 |
| BsaJI | CCNNGG | 1 cut(s) | 427 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 59, 224, 536, 769 |
| Bse1I | ACTGG | 3 cut(s) | 116, 163, 286 |
| Bse8I | GATNNNNATC | 1 cut(s) | 67 |
| BseDI | CCNNGG | 1 cut(s) | 427 |
| BseGI | GGATG | 2 cut(s) | 340, 526 |
| BseJI | GATNNNNATC | 1 cut(s) | 67 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 59, 224, 536, 769 |
| BseNI | ACTGG | 3 cut(s) | 116, 163, 286 |
| BseSI | GKGCMC | 2 cut(s) | 788, 821 |
| BseXI | GCAGC | 1 cut(s) | 563 |
| Bsh1236I | CGCG | 1 cut(s) | 582 |
| BshFI | GGCC | 1 cut(s) | 14 |
| BsiHKAI | GWGCWC | 3 cut(s) | 348, 659, 762 |
| BsiHKCI | CYCGRG | 1 cut(s) | 362 |
| BslFI | GGGAC | 2 cut(s) | 28, 219 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 59, 224, 536, 769 |
| BsmFI | GGGAC | 2 cut(s) | 28, 219 |
| BsnI | GGCC | 1 cut(s) | 14 |
| BsoBI | CYCGRG | 1 cut(s) | 362 |
| Bsp1286I | GDGCHC | 5 cut(s) | 348, 659, 762, 788, 821 |
| Bsp143I | GATC | 1 cut(s) | 916 |
| Bsp19I | CCATGG | 1 cut(s) | 427 |
| BspACI | CCGC | 1 cut(s) | 580 |
| BspANI | GGCC | 1 cut(s) | 14 |
| BspFNI | CGCG | 1 cut(s) | 582 |
| BspLI | GGNNCC | 3 cut(s) | 44, 235, 486 |
| BspPI | GGATC | 1 cut(s) | 911 |
| BsrI | ACTGG | 3 cut(s) | 116, 163, 286 |
| BssECI | CCNNGG | 1 cut(s) | 427 |
| BssMI | GATC | 1 cut(s) | 916 |
| BssT1I | CCWWGG | 1 cut(s) | 427 |
| Bst4CI | ACNGT | 3 cut(s) | 179, 325, 560 |
| Bst6I | CTCTTC | 2 cut(s) | 460, 645 |
| BstBAI | YACGTR | 1 cut(s) | 440 |
| BstC8I | GCNNGC | 2 cut(s) | 142, 212 |
| BstDSI | CCRYGG | 1 cut(s) | 427 |
| BstF5I | GGATG | 2 cut(s) | 340, 526 |
| BstFNI | CGCG | 1 cut(s) | 582 |
| BstHHI | GCGC | 1 cut(s) | 445 |
| BstKTI | GATC | 1 cut(s) | 919 |
| BstMBI | GATC | 1 cut(s) | 916 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 114, 757 |
| BstNSI | RCATGY | 1 cut(s) | 817 |
| BstSFI | CTRYAG | 1 cut(s) | 118 |
| BstSLI | GKGCMC | 2 cut(s) | 788, 821 |
| BstUI | CGCG | 1 cut(s) | 582 |
| BstV1I | GCAGC | 1 cut(s) | 563 |
| BstV2I | GAAGAC | 2 cut(s) | 535, 734 |
| BsuRI | GGCC | 1 cut(s) | 14 |
| BtgI | CCRYGG | 1 cut(s) | 427 |
| BtrI | CACGTC | 1 cut(s) | 868 |
| BtsCI | GGATG | 2 cut(s) | 340, 526 |
| BtsIMutI | CAGTG | 1 cut(s) | 788 |
| Cac8I | GCNNGC | 2 cut(s) | 142, 212 |
| CfoI | GCGC | 1 cut(s) | 445 |
| Cfr13I | GGNCC | 5 cut(s) | 13, 42, 233, 485, 700 |
| CseI | GACGC | 1 cut(s) | 309 |
| Csp6I | GTAC | 6 cut(s) | 88, 385, 394, 451, 505, 913 |
| CviAII | CATG | 7 cut(s) | 91, 341, 397, 428, 572, 608, 814 |
| CviQI | GTAC | 6 cut(s) | 88, 385, 394, 451, 505, 913 |
| DpnI | GATC | 1 cut(s) | 918 |
| DpnII | GATC | 1 cut(s) | 916 |
| DraI | TTTAAA | 1 cut(s) | 183 |
| Eam1104I | CTCTTC | 2 cut(s) | 460, 645 |
| EarI | CTCTTC | 2 cut(s) | 460, 645 |
| Eco130I | CCWWGG | 1 cut(s) | 427 |
| Eco32I | GATATC | 2 cut(s) | 69, 256 |
| Eco47I | GGWCC | 4 cut(s) | 42, 233, 485, 700 |
| Eco88I | CYCGRG | 1 cut(s) | 362 |
| EcoO109I | RGGNCCY | 2 cut(s) | 42, 700 |
| EcoRI | GAATTC | 1 cut(s) | 848 |
| EcoRV | GATATC | 2 cut(s) | 69, 256 |
| EcoT14I | CCWWGG | 1 cut(s) | 427 |
| ErhI | CCWWGG | 1 cut(s) | 427 |
| FaeI | CATG | 7 cut(s) | 94, 344, 400, 431, 575, 611, 817 |
| FaqI | GGGAC | 2 cut(s) | 28, 219 |
| FatI | CATG | 7 cut(s) | 90, 340, 396, 427, 571, 607, 813 |
| Fnu4HI | GCNGC | 2 cut(s) | 577, 580 |
| FokI | GGATG | 2 cut(s) | 347, 513 |
| Fsp4HI | GCNGC | 2 cut(s) | 577, 580 |
| FspBI | CTAG | 3 cut(s) | 380, 534, 704 |
| GlaI | GCGC | 1 cut(s) | 444 |
| GluI | GCNGC | 2 cut(s) | 577, 580 |
| HaeIII | GGCC | 1 cut(s) | 14 |
| HgaI | GACGC | 1 cut(s) | 309 |
| HhaI | GCGC | 1 cut(s) | 445 |
| Hin1II | CATG | 7 cut(s) | 94, 344, 400, 431, 575, 611, 817 |
| Hin6I | GCGC | 1 cut(s) | 443 |
| HinP1I | GCGC | 1 cut(s) | 443 |
| HincII | GTYRAC | 1 cut(s) | 247 |
| HindII | GTYRAC | 1 cut(s) | 247 |
| HindIII | AAGCTT | 1 cut(s) | 142 |
| HinfI | GANTC | 4 cut(s) | 83, 540, 617, 825 |
| HphI | GGTGA | 2 cut(s) | 17, 416 |
| Hpy166II | GTNNAC | 2 cut(s) | 247, 387 |
| Hpy188I | TCNGA | 4 cut(s) | 192, 199, 661, 847 |
| Hpy188III | TCNNGA | 6 cut(s) | 53, 310, 362, 364, 413, 477 |
| Hpy8I | GTNNAC | 2 cut(s) | 247, 387 |
| HpyAV | CCTTC | 4 cut(s) | 474, 715, 798, 878 |
| HpyCH4III | ACNGT | 3 cut(s) | 179, 325, 560 |
| HpyCH4IV | ACGT | 2 cut(s) | 439, 867 |
| HpyCH4V | TGCA | 4 cut(s) | 140, 338, 813, 896 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 114, 757 |
| HpySE526I | ACGT | 2 cut(s) | 439, 867 |
| Hsp92II | CATG | 7 cut(s) | 94, 344, 400, 431, 575, 611, 817 |
| HspAI | GCGC | 1 cut(s) | 443 |
| Kzo9I | GATC | 1 cut(s) | 916 |
| LmnI | GCTCC | 2 cut(s) | 662, 765 |
| LpnPI | CCDG | 8 cut(s) | 97, 144, 206, 299, 375, 462, 628, 673 |
| Lsp1109I | GCAGC | 1 cut(s) | 563 |
| LweI | GCATC | 2 cut(s) | 325, 363 |
| MaeI | CTAG | 3 cut(s) | 380, 534, 704 |
| MaeII | ACGT | 2 cut(s) | 439, 867 |
| MaeIII | GTNAC | 2 cut(s) | 98, 667 |
| MalI | GATC | 1 cut(s) | 918 |
| MboI | GATC | 1 cut(s) | 916 |
| MboII | GAAGA | 5 cut(s) | 92, 477, 535, 662, 734 |
| MfeI | CAATTG | 3 cut(s) | 329, 489, 629 |
| MhlI | GDGCHC | 5 cut(s) | 348, 659, 762, 788, 821 |
| MlyI | GAGTC | 2 cut(s) | 549, 819 |
| MmeI | TCCRAC | 1 cut(s) | 684 |
| MnlI | CCTC | 5 cut(s) | 225, 306, 409, 540, 691 |
| MseI | TTAA | 4 cut(s) | 27, 173, 182, 555 |
| MunI | CAATTG | 3 cut(s) | 329, 489, 629 |
| MvnI | CGCG | 1 cut(s) | 582 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 114, 757 |
| NcoI | CCATGG | 1 cut(s) | 427 |
| NdeII | GATC | 1 cut(s) | 916 |
| NlaIII | CATG | 7 cut(s) | 94, 344, 400, 431, 575, 611, 817 |
| NlaIV | GGNNCC | 3 cut(s) | 44, 235, 486 |
| NmuCI | GTSAC | 1 cut(s) | 98 |
| NspI | RCATGY | 1 cut(s) | 817 |
| PaeR7I | CTCGAG | 1 cut(s) | 362 |
| PfeI | GAWTC | 2 cut(s) | 83, 617 |
| PflFI | GACNNNGTC | 1 cut(s) | 40 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 224 |
| PkrI | GCNGC | 2 cut(s) | 578, 581 |
| PleI | GAGTC | 2 cut(s) | 548, 819 |
| PpsI | GAGTC | 2 cut(s) | 548, 819 |
| Ppu21I | YACGTR | 1 cut(s) | 440 |
| PpuMI | RGGWCCY | 2 cut(s) | 42, 700 |
| Psp5II | RGGWCCY | 2 cut(s) | 42, 700 |
| PspN4I | GGNNCC | 3 cut(s) | 44, 235, 486 |
| PspPI | GGNCC | 5 cut(s) | 13, 42, 233, 485, 700 |
| PspPPI | RGGWCCY | 2 cut(s) | 42, 700 |
| PsyI | GACNNNGTC | 1 cut(s) | 40 |
| RsaI | GTAC | 6 cut(s) | 89, 386, 395, 452, 506, 914 |
| RsaNI | GTAC | 6 cut(s) | 88, 385, 394, 451, 505, 913 |
| SaqAI | TTAA | 4 cut(s) | 27, 173, 182, 555 |
| SatI | GCNGC | 2 cut(s) | 577, 580 |
| Sau3AI | GATC | 1 cut(s) | 916 |
| Sau96I | GGNCC | 5 cut(s) | 13, 42, 233, 485, 700 |
| SchI | GAGTC | 2 cut(s) | 549, 819 |
| SduI | GDGCHC | 5 cut(s) | 348, 659, 762, 788, 821 |
| SfaNI | GCATC | 2 cut(s) | 325, 363 |
| SfcI | CTRYAG | 1 cut(s) | 118 |
| Sfr274I | CTCGAG | 1 cut(s) | 362 |
| SinI | GGWCC | 4 cut(s) | 42, 233, 485, 700 |
| SlaI | CTCGAG | 1 cut(s) | 362 |
| SmlI | CTYRAG | 4 cut(s) | 362, 413, 446, 455 |
| SmoI | CTYRAG | 4 cut(s) | 362, 413, 446, 455 |
| SsiI | CCGC | 1 cut(s) | 580 |
| SspMI | CTAG | 3 cut(s) | 380, 534, 704 |
| StyI | CCWWGG | 1 cut(s) | 427 |
| TaaI | ACNGT | 3 cut(s) | 179, 325, 560 |
| TaiI | ACGT | 2 cut(s) | 442, 870 |
| TaqI | TCGA | 3 cut(s) | 252, 309, 363 |
| TaqII | GACCGA | 2 cut(s) | 221, 232 |
| TatI | WGTACW | 1 cut(s) | 384 |
| TauI | GCSGC | 1 cut(s) | 582 |
| TfiI | GAWTC | 2 cut(s) | 83, 617 |
| Tru1I | TTAA | 4 cut(s) | 27, 173, 182, 555 |
| Tru9I | TTAA | 4 cut(s) | 27, 173, 182, 555 |
| TscAI | CASTG | 1 cut(s) | 788 |
| TseFI | GTSAC | 1 cut(s) | 98 |
| TseI | GCWGC | 1 cut(s) | 576 |
| Tsp45I | GTSAC | 1 cut(s) | 98 |
| TspDTI | ATGAA | 6 cut(s) | 107, 296, 560, 668, 780, 897 |
| TspGWI | ACGGA | 2 cut(s) | 312, 536 |
| TspRI | CASTG | 1 cut(s) | 788 |
| Tth111I | GACNNNGTC | 1 cut(s) | 40 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 224 |
| VpaK11BI | GGWCC | 4 cut(s) | 42, 233, 485, 700 |
| XapI | RAATTY | 2 cut(s) | 275, 848 |
| XceI | RCATGY | 1 cut(s) | 817 |
| XhoI | CTCGAG | 1 cut(s) | 362 |
| XspI | CTAG | 3 cut(s) | 380, 534, 704 |