Rmu_co8473147.1_g000001

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8473147.1
OG0000085
Physical Location & Seq
Reverse (-)
5 .. 1948
1944 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8473147.1_g000001.1.cds

Sequence Viewer

Length: 1944 bp
atgtttcaagattcaaacttgctagatgcccgagccacaacatatttagtggtgaaggcccttaaagattctagcttgcttttggacgctgaagatgacggatgcgtaaagatgcatgatgtcattcgggatatggcaatctcaatttcgttatcggaaggccagcgggtcttggtgaaagctggctgtgaattgaagaattggccacagattgatgcacataaaggctactctggaatctcactaatggtgaacaaaatttgcaagctaccccaagagttggtatgtccaaatgtccagattttattgctgcaacacaatgcttcattaaatgatatcccaaactctttcttccaaagtcagaaagaattaagggtcttagatcttagccgcactggtatttcattactaccgcaatcaatcaatttcctaaccaatcttcaagctttgtatttagatcattgcaacagcataattgacatttctgtaatcggaaaacttaacaagcttgagattcttagtatgagaggaattgctctgagagaatttccaagagaaataggacaattgaccaatctaaggatgttagatgtcagtgctgaatttaatctactgacactgagattggatggacgtattgccacacttccatctgaagtgatatcaaagttgcatagattagaagaactgtacatgcaatgtacattttgggactggaggagtaatattgatggagaaggggatggattctccgagagctcggagagtgatactgatggagaaggggaagaaactaatattggcttcgatgaattagttggtttatcatatttaagcattctgaaagtttgcatatcagatggaaattgcatccctagaagtattgaggttgaaccgaattgggtttacttcagtattagtattggcagctgcaatgatatagcgagacatagtatgaacattccatccggtcataattgtagatccttgtgtcttgacagtactgacacaaccatgggaacctttccagactggtttgtaaacgctgtggtaaagaatactgaggggctacagtataaagactgcagagggttaagtaacattcttgtggaatatgaccgtgggaggttacatggactgaaatttctcaatgtaattggtcgctgtgagaacttgagagaattgatgaatgcaataacatgtgttccagatatgcctgtgtttgagaagttggaaaggttgaatctggaatacctggatgacctgaagcagttatgtgttggtgagttgccacctggatctctctggagtctgaaattactgaaggtcagtcggtgtcctaatttggggaatgtactgttgccatcaaaattgttgcagaaactaccaaatctggaaaaactaatctgtgagacaagtggagtggaatatatttttggatgtgaaggatttgagccggatcaaacaaatctgagagagatggagttatgggatctagatgtaataagaagcatatgtaatggtcctgccccacgtggaatgttccagactctaaaggaattggccatatataattgcaacttccagggaagcctcttcacatttgatgtcgctcagtgtctttttcaattggaaaagcttactgtagtcaaatgccctctgttggaaggagtaatcgaagcaaggagggaaacattgaacaacaagaagaccgttcttccaaaattgaagaacttacgtttgcatagtcttccaatgttgtacaagggaagtgctactattgattttgagtgtccttcattggaagacttgcatctgcaggactgcccccacttgtcatttcattcctctgcttctgcttctgactacttccacagcaggaaccaagtccttttcaatgatatgcgtcatcgcgttgatttaatgtatgtcgctgggtcataa

Protein Analysis

647

Amino Acids

72.92

Weight (kDa)

5.21

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 280
AccII CGCG 1 cut(s) 1914
AciI CCGC 3 cut(s) 166, 391, 413
AclWI GGATC 4 cut(s) 978, 1306, 1467, 1500
AcoI YGGCCR 2 cut(s) 203, 1563
AcsI RAATTY 4 cut(s) 258, 545, 602, 1142
AcuI CTGAAG 5 cut(s) 111, 675, 895, 1286, 1343
AcvI CACGTG 1 cut(s) 1535
AfaI GTAC 5 cut(s) 692, 703, 1003, 1356, 1763
AfiI CCNNNNNNNGG 4 cut(s) 280, 579, 1346, 1663
AflIII ACRYGT 1 cut(s) 1199
AjnI CCWGG 3 cut(s) 1254, 1294, 1584
AjuI GAANNNNNNNTTGG 4 cut(s) 783, 815, 1419, 1451
AloI GAACNNNNNNTCC 2 cut(s) 950, 982
AluBI AGCT 8 cut(s) 75, 182, 268, 446, 508, 759, 930, 1639
AluI AGCT 8 cut(s) 75, 182, 268, 446, 508, 759, 930, 1639
Alw21I GWGCWC 1 cut(s) 761
Alw26I GTCTC 2 cut(s) 940, 1406
AlwI GGATC 4 cut(s) 978, 1306, 1467, 1500
Ama87I CYCGRG 1 cut(s) 30
AoxI GGCC 4 cut(s) 57, 160, 203, 1563
ApeKI GCWGC 3 cut(s) 310, 927, 930
ApoI RAATTY 4 cut(s) 258, 545, 602, 1142
AspS9I GGNCC 2 cut(s) 58, 1523
AsuHPI GGTGA 4 cut(s) 64, 187, 262, 1295
AvaI CYCGRG 1 cut(s) 30
AvaII GGWCC 1 cut(s) 1523
BalI TGGCCA 2 cut(s) 205, 1565
BanII GRGCYC 1 cut(s) 761
BbrPI CACGTG 1 cut(s) 1535
BbsI GAAGAC 3 cut(s) 1715, 1742, 1812
Bbv12I GWGCWC 1 cut(s) 761
BbvI GCAGC 3 cut(s) 297, 917, 939
BccI CCATC 9 cut(s) 623, 658, 725, 737, 770, 854, 973, 1372, 1474
BciT130I CCWGG 3 cut(s) 1256, 1296, 1586
BcoDI GTCTC 2 cut(s) 940, 1406
BfaI CTAG 4 cut(s) 23, 72, 876, 1496
BfmI CTRYAG 4 cut(s) 1070, 1084, 1644, 1817
BglII AGATCT 1 cut(s) 382
BisI GCNGC 4 cut(s) 311, 391, 928, 931
BlsI GCNGC 4 cut(s) 312, 392, 929, 932
BmcAI AGTACT 1 cut(s) 1003
Bme1390I CCNGG 3 cut(s) 1256, 1296, 1586
Bme18I GGWCC 1 cut(s) 1523
BmeT110I CYCGRG 1 cut(s) 30
BmgT120I GGNCC 2 cut(s) 58, 1523
BmiI GGNNCC 2 cut(s) 1021, 1883
BmrFI CCNGG 3 cut(s) 1256, 1296, 1586
BmsI GCATC 6 cut(s) 16, 92, 102, 205, 879, 1822
BpiI GAAGAC 3 cut(s) 1715, 1742, 1812
BpmI CTGGAG 2 cut(s) 736, 1327
BpuEI CTTGAG 2 cut(s) 530, 1195
BsaAI YACGTR 1 cut(s) 1535
BsaJI CCNNGG 3 cut(s) 1014, 1120, 1585
BsaWI WCCGGW 1 cut(s) 968
Bsc4I CCNNNNNNNGG 4 cut(s) 280, 579, 1346, 1663
Bse1I ACTGG 3 cut(s) 400, 719, 1037
Bse3DI GCAATG 3 cut(s) 460, 704, 940
BseBI CCWGG 3 cut(s) 1256, 1296, 1586
BseDI CCNNGG 3 cut(s) 1014, 1120, 1585
BseGI GGATG 8 cut(s) 107, 588, 634, 748, 870, 965, 1264, 1445
BseLI CCNNNNNNNGG 4 cut(s) 280, 579, 1346, 1663
BseMI GCAATG 3 cut(s) 460, 704, 940
BseMII CTCAG 5 cut(s) 530, 611, 1053, 1463, 1628
BseNI ACTGG 3 cut(s) 400, 719, 1037
BseRI GAGGAG 1 cut(s) 733
BseXI GCAGC 3 cut(s) 297, 917, 939
BseYI CCCAGC 1 cut(s) 1934
Bsh1236I CGCG 1 cut(s) 1914
BshFI GGCC 4 cut(s) 59, 162, 205, 1565
BsiHKAI GWGCWC 1 cut(s) 761
BsiHKCI CYCGRG 1 cut(s) 30
BsiSI CCGG 2 cut(s) 969, 1457
BslFI GGGAC 1 cut(s) 725
BslI CCNNNNNNNGG 4 cut(s) 280, 579, 1346, 1663
BsmAI GTCTC 2 cut(s) 940, 1406
BsmFI GGGAC 1 cut(s) 725
BsmI GAATGC 2 cut(s) 837, 1195
BsnI GGCC 4 cut(s) 59, 162, 205, 1565
BsoBI CYCGRG 1 cut(s) 30
Bsp1286I GDGCHC 1 cut(s) 761
Bsp1407I TGTACA 3 cut(s) 690, 701, 1761
Bsp143I GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
Bsp19I CCATGG 1 cut(s) 1014
BspACI CCGC 3 cut(s) 166, 391, 413
BspANI GGCC 4 cut(s) 59, 162, 205, 1565
BspCNI CTCAG 5 cut(s) 531, 612, 1054, 1464, 1627
BspFNI CGCG 1 cut(s) 1914
BspLI GGNNCC 2 cut(s) 1021, 1883
BspMAI CTGCAG 2 cut(s) 1088, 1821
BspPI GGATC 4 cut(s) 978, 1306, 1467, 1500
BsrDI GCAATG 3 cut(s) 460, 704, 940
BsrGI TGTACA 3 cut(s) 690, 701, 1761
BsrI ACTGG 3 cut(s) 400, 719, 1037
BssECI CCNNGG 3 cut(s) 1014, 1120, 1585
BssMI GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
BssT1I CCWWGG 1 cut(s) 1014
Bst2UI CCWGG 3 cut(s) 1256, 1296, 1586
Bst4CI ACNGT 7 cut(s) 690, 1001, 1074, 1121, 1359, 1645, 1714
Bst6I CTCTTC 1 cut(s) 1601
BstAUI TGTACA 3 cut(s) 690, 701, 1761
BstBAI YACGTR 1 cut(s) 1535
BstC8I GCNNGC 4 cut(s) 77, 164, 184, 266
BstDEI CTNAG 9 cut(s) 379, 386, 518, 539, 578, 620, 1062, 1472, 1614
BstDSI CCRYGG 2 cut(s) 1014, 1120
BstF5I GGATG 8 cut(s) 107, 588, 634, 748, 870, 965, 1264, 1445
BstFNI CGCG 1 cut(s) 1914
BstKTI GATC 6 cut(s) 385, 460, 986, 1301, 1462, 1495
BstMAI GTCTC 2 cut(s) 940, 1406
BstMBI GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
BstNI CCWGG 3 cut(s) 1256, 1296, 1586
BstNSI RCATGY 2 cut(s) 697, 1203
BstSCI CCNGG 3 cut(s) 1254, 1294, 1584
BstSFI CTRYAG 4 cut(s) 1070, 1084, 1644, 1817
BstUI CGCG 1 cut(s) 1914
BstV1I GCAGC 3 cut(s) 297, 917, 939
BstV2I GAAGAC 3 cut(s) 1715, 1742, 1812
BstX2I RGATCY 4 cut(s) 382, 983, 1298, 1492
BstYI RGATCY 4 cut(s) 382, 983, 1298, 1492
BsuRI GGCC 4 cut(s) 59, 162, 205, 1565
BtgI CCRYGG 2 cut(s) 1014, 1120
BtgZI GCGATG 1 cut(s) 1895
BtsCI GGATG 8 cut(s) 107, 588, 634, 748, 870, 965, 1264, 1445
BtsIMutI CAGTG 4 cut(s) 393, 601, 617, 1622
Cac8I GCNNGC 4 cut(s) 77, 164, 184, 266
Cfr13I GGNCC 2 cut(s) 58, 1523
CseI GACGC 2 cut(s) 95, 1895
Csp6I GTAC 5 cut(s) 691, 702, 1002, 1355, 1762
CspCI CAANNNNNGTGG 2 cut(s) 1404, 1439
CviAII CATG 5 cut(s) 116, 694, 1015, 1133, 1200
CviQI GTAC 5 cut(s) 691, 702, 1002, 1355, 1762
DdeI CTNAG 9 cut(s) 379, 386, 518, 539, 578, 620, 1062, 1472, 1614
DpnI GATC 6 cut(s) 384, 459, 985, 1300, 1461, 1494
DpnII GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
EaeI YGGCCR 2 cut(s) 203, 1563
Eam1104I CTCTTC 1 cut(s) 1601
EarI CTCTTC 1 cut(s) 1601
Ecl136II GAGCTC 1 cut(s) 759
Eco130I CCWWGG 1 cut(s) 1014
Eco24I GRGCYC 1 cut(s) 761
Eco32I GATATC 2 cut(s) 337, 663
Eco47I GGWCC 1 cut(s) 1523
Eco53kI GAGCTC 1 cut(s) 759
Eco57I CTGAAG 5 cut(s) 111, 675, 895, 1286, 1343
Eco72I CACGTG 1 cut(s) 1535
Eco88I CYCGRG 1 cut(s) 30
EcoICRI GAGCTC 1 cut(s) 759
EcoO109I RGGNCCY 1 cut(s) 58
EcoRII CCWGG 3 cut(s) 1254, 1294, 1584
EcoRV GATATC 2 cut(s) 337, 663
EcoT14I CCWWGG 1 cut(s) 1014
EcoT22I ATGCAT 1 cut(s) 117
EcoT38I GRGCYC 1 cut(s) 761
ErhI CCWWGG 1 cut(s) 1014
FaeI CATG 5 cut(s) 119, 697, 1018, 1136, 1203
FaqI GGGAC 1 cut(s) 725
FatI CATG 5 cut(s) 115, 693, 1014, 1132, 1199
FauI CCCGC 1 cut(s) 159
FauNDI CATATG 1 cut(s) 1514
Fnu4HI GCNGC 4 cut(s) 311, 391, 928, 931
FokI GGATG 8 cut(s) 114, 595, 641, 755, 857, 952, 1271, 1452
FriOI GRGCYC 1 cut(s) 761
Fsp4HI GCNGC 4 cut(s) 311, 391, 928, 931
FspBI CTAG 4 cut(s) 23, 72, 876, 1496
GluI GCNGC 4 cut(s) 311, 391, 928, 931
GsaI CCCAGC 1 cut(s) 1938
GsuI CTGGAG 2 cut(s) 736, 1327
HaeIII GGCC 4 cut(s) 59, 162, 205, 1565
HapII CCGG 2 cut(s) 969, 1457
HgaI GACGC 2 cut(s) 95, 1895
Hin1II CATG 5 cut(s) 119, 697, 1018, 1136, 1203
HindIII AAGCTT 3 cut(s) 444, 506, 1637
HinfI GANTC 8 cut(s) 11, 68, 237, 514, 747, 1243, 1309, 1549
HpaII CCGG 2 cut(s) 969, 1457
HphI GGTGA 4 cut(s) 64, 187, 262, 1295
Hpy166II GTNNAC 3 cut(s) 253, 907, 1042
Hpy8I GTNNAC 3 cut(s) 253, 907, 1042
HpyAV CCTTC 8 cut(s) 49, 152, 731, 776, 1318, 1439, 1661, 1806
HpyCH4III ACNGT 7 cut(s) 690, 1001, 1074, 1121, 1359, 1645, 1714
HpyCH4IV ACGT 3 cut(s) 634, 1534, 1738
HpyF3I CTNAG 9 cut(s) 379, 386, 518, 539, 578, 620, 1062, 1472, 1614
HpySE526I ACGT 3 cut(s) 634, 1534, 1738
Hsp92II CATG 5 cut(s) 119, 697, 1018, 1136, 1203
Kzo9I GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
Lsp1109I GCAGC 3 cut(s) 297, 917, 939
LweI GCATC 6 cut(s) 16, 92, 102, 205, 879, 1822
MaeI CTAG 4 cut(s) 23, 72, 876, 1496
MaeII ACGT 3 cut(s) 634, 1534, 1738
MaeIII GTNAC 2 cut(s) 1097, 1128
MalI GATC 6 cut(s) 384, 459, 985, 1300, 1461, 1494
MboI GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
MfeI CAATTG 2 cut(s) 566, 1628
MflI RGATCY 4 cut(s) 382, 983, 1298, 1492
MhlI GDGCHC 1 cut(s) 761
MlsI TGGCCA 2 cut(s) 205, 1565
MluNI TGGCCA 2 cut(s) 205, 1565
MlyI GAGTC 2 cut(s) 1318, 1543
MmeI TCCRAC 2 cut(s) 1212, 1644
Mox20I TGGCCA 2 cut(s) 205, 1565
Mph1103I ATGCAT 1 cut(s) 117
MscI TGGCCA 2 cut(s) 205, 1565
MseI TTAA 8 cut(s) 63, 329, 371, 501, 606, 833, 1094, 1922
MslI CAYNNNNRTG 2 cut(s) 1013, 1106
Msp20I TGGCCA 2 cut(s) 205, 1565
MspA1I CMGCKG 2 cut(s) 166, 930
MspI CCGG 2 cut(s) 969, 1457
MspR9I CCNGG 3 cut(s) 1256, 1296, 1586
MunI CAATTG 2 cut(s) 566, 1628
Mva1269I GAATGC 2 cut(s) 837, 1195
MvaI CCWGG 3 cut(s) 1256, 1296, 1586
MvnI CGCG 1 cut(s) 1914
NcoI CCATGG 1 cut(s) 1014
NdeI CATATG 1 cut(s) 1514
NdeII GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
NlaIII CATG 5 cut(s) 119, 697, 1018, 1136, 1203
NlaIV GGNNCC 2 cut(s) 1021, 1883
NsiI ATGCAT 1 cut(s) 117
NspI RCATGY 2 cut(s) 697, 1203
PciI ACATGT 1 cut(s) 1199
PctI GAATGC 2 cut(s) 837, 1195
PfeI GAWTC 6 cut(s) 11, 68, 237, 514, 747, 1243
PflMI CCANNNNNTGG 1 cut(s) 280
PkrI GCNGC 4 cut(s) 312, 392, 929, 932
PleI GAGTC 2 cut(s) 1317, 1543
PmaCI CACGTG 1 cut(s) 1535
PmlI CACGTG 1 cut(s) 1535
PpsI GAGTC 2 cut(s) 1317, 1543
Ppu21I YACGTR 1 cut(s) 1535
PscI ACATGT 1 cut(s) 1199
Psp124BI GAGCTC 1 cut(s) 761
Psp6I CCWGG 3 cut(s) 1254, 1294, 1584
PspCI CACGTG 1 cut(s) 1535
PspFI CCCAGC 1 cut(s) 1934
PspGI CCWGG 3 cut(s) 1254, 1294, 1584
PspN4I GGNNCC 2 cut(s) 1021, 1883
PspPI GGNCC 2 cut(s) 58, 1523
PstI CTGCAG 2 cut(s) 1088, 1821
PsuI RGATCY 4 cut(s) 382, 983, 1298, 1492
PvuII CAGCTG 1 cut(s) 930
RsaI GTAC 5 cut(s) 692, 703, 1003, 1356, 1763
RsaNI GTAC 5 cut(s) 691, 702, 1002, 1355, 1762
RseI CAYNNNNRTG 2 cut(s) 1013, 1106
SacI GAGCTC 1 cut(s) 761
SaqAI TTAA 8 cut(s) 63, 329, 371, 501, 606, 833, 1094, 1922
SatI GCNGC 4 cut(s) 311, 391, 928, 931
Sau3AI GATC 6 cut(s) 382, 457, 983, 1298, 1459, 1492
Sau96I GGNCC 2 cut(s) 58, 1523
ScaI AGTACT 1 cut(s) 1003
SchI GAGTC 2 cut(s) 1318, 1543
ScrFI CCNGG 3 cut(s) 1256, 1296, 1586
SduI GDGCHC 1 cut(s) 761
SfaNI GCATC 6 cut(s) 16, 92, 102, 205, 879, 1822
SfcI CTRYAG 4 cut(s) 1070, 1084, 1644, 1817
SinI GGWCC 1 cut(s) 1523
SmiMI CAYNNNNRTG 2 cut(s) 1013, 1106
SmlI CTYRAG 2 cut(s) 509, 1174
SmoI CTYRAG 2 cut(s) 509, 1174
SsiI CCGC 3 cut(s) 166, 391, 413
SspI AATATT 2 cut(s) 727, 799
SspMI CTAG 4 cut(s) 23, 72, 876, 1496
SstI GAGCTC 1 cut(s) 761
StyD4I CCNGG 3 cut(s) 1254, 1294, 1584
StyI CCWWGG 1 cut(s) 1014
TaaI ACNGT 7 cut(s) 690, 1001, 1074, 1121, 1359, 1645, 1714
TaiI ACGT 3 cut(s) 637, 1537, 1741
TaqI TCGA 2 cut(s) 807, 1677
TatI WGTACW 5 cut(s) 690, 701, 1001, 1354, 1761
TauI GCSGC 1 cut(s) 393
TfiI GAWTC 6 cut(s) 11, 68, 237, 514, 747, 1243
Tru1I TTAA 8 cut(s) 63, 329, 371, 501, 606, 833, 1094, 1922
Tru9I TTAA 8 cut(s) 63, 329, 371, 501, 606, 833, 1094, 1922
TscAI CASTG 4 cut(s) 400, 601, 624, 1622
TseI GCWGC 3 cut(s) 310, 927, 930
TspDTI ATGAA 7 cut(s) 315, 393, 825, 971, 1202, 1788, 1832
TspGWI ACGGA 1 cut(s) 114
TspRI CASTG 4 cut(s) 400, 601, 624, 1622
Van91I CCANNNNNTGG 1 cut(s) 280
VpaK11BI GGWCC 1 cut(s) 1523
XapI RAATTY 4 cut(s) 258, 545, 602, 1142
XbaI TCTAGA 1 cut(s) 1495
XceI RCATGY 2 cut(s) 697, 1203
XspI CTAG 4 cut(s) 23, 72, 876, 1496
ZrmI AGTACT 1 cut(s) 1003
Zsp2I ATGCAT 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.