Rmu_sc0007793.1_g000025

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007793.1
OG0000085
Physical Location & Seq
Reverse (-)
120258 .. 124721
4464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007793.1_g000025.1.cds

Sequence Viewer

Length: 3606 bp
atggcctcgagctcccaaacaacctcttcatctcttccttcgtcatcagctcctcagtggaagcatgatgtgtttctcagcttcaggggtgtagacacccggaagggtattgtatcctctttataccatgaattgaaaaccagaggaatacaaacattcatggatgaccaagggcttcagcaagggatgcctatttctccaagtctcctaacagcaattgaggaatccaggtgtgcagtcgttcttctatcgccaaactatgcttcttctgcatggtgtttggatgaacttacaaagattcttcagtgctctgaagccaacaagacactgcttctgccaattttttataatgtggatccctctcatgtgcgacatcaaaagggaagttttgcagaagccttcaccaagcatgaagtgaggtatgggcaaggcaatgatgatgcagagaaggtgaagaagtggagagctgctttaacacaagtggccaatctctctggattggattcaaacaaatttgggtctgacagagaacttatccaatgcattgtggaacttgtgtgccagaaagtacggcctattccaataatgccgagcagcaattttgaagcatttgaatcaacaagaaaaaccatgaatgagctgatggaggcattagaagatgatgaggtcgctgccattggggtctatggaatgggaggggttgggaagacaaccatggtgaaacatgtcagtgcacaagcccaaaaaagggggctttttgatcatgtgattatggctgttgtatcccaaaccccaaatacaagaaacattcaagacgcacttgcggatctgctgggcttgaaatgggaggagcagtcagaaattggacgagcccgtagattgcagacggagatacttggaacaaataagatccttataatcttagacgacatttggaatacactagacttgtcaagcattggaattcccagctacaacgagcttcaaatctgcaattccaaactgctattcaccacaaggagattgaatgtttgccataccatggagagccaaacaaaaattcatctcaatatcttatcagaagatgatgcttggaacttgtttttgaagaaggcaagaaggtctattcaaaagtctagccctttctatgaagtagccagaaaggtagctagagaatgtgctggtctcccagttgccttgattgcagttgcgagggcacttggagataaagagcttgaagactggaaagaagcagctcgacaacttgagatgtctcaacctgccaaccttgacgaggagaaagatgtgttcaagtgcattaagttgagctatgattaccttgagagtgacgacgccaagtcttgcttcttgctttgctgcctattcccagaagattatgacatccgtgttgaagacttgatgagctatgggttcggaacagggttgtttcgacatgtcaacagcacaatagaatatgccagagtcagagcacattcggttactagataccttaaagcttcttgtctgcttttggatgggacaaaagaaggatctgtaaggatgcatgatgtcattcgagatatggccatatccattgcatcctctgtagatggccacacctctttggtgaaaactaattgtcatttgaaagattggtcgatggatgcagacaaaggctactcagcaatctcactaatcgagagcaacatttgcaagcttcccaacaagttggtatgttcaaaacttcagattttactgctacaaaacaatgctgatataagaaagatcccaataaccttttttcaaagccccaatgatttaagggtcttagatcttagcaacactggcatttcatcactgcccccatcattcagtctcctaaccagactccaagctttgcgtttagatgattgctactccatgattgacatatccctacttggaaaactgaaaaagcttgagattcttagtatgagacgctgttactctattaagaaatttccaaaagagattggatatttgacgaatttaagaatgttggacttgactgaaacttattttgagacagttccctctcaagtgatatcaaggttgtatagattggaagtactgtacatgagatgttattttggcgagtggggttgtaaagctgcgggaggctgcttctgttttctttgtaagaatgctagctttgatgaattaattggcttgtcaggtttaaacactttgcaggttgccgtatgtggtgcagaatgcttgcctcaaaacgttgagttcaatccaaattgggacaggttttgtattagtatccgaagatacggcaagaggagagtaccctcttgcggcaatcttatcatttatgacgaggtcttcctacttcgttcttcaagaacattgatcatggcggaaaccatgaataacttacccgattggttcatcagtgtagtgacagaaagaacagatgctttatgcttcacaggtcaccgtggcttaattaaccttctcgaggaacatgaccgtgggagattacatggactcaagtatttgtgtatagaatcttcccaatgtgccaaagtgttgttgaacacaataacatggactagggtgtcaaatgaacctgtgtttgagaacttggaagagttggaaatcgccgggtgtctcttggaggagctatgtgtcggtgaattaccacctggctctctacgtaatcttaagaaattgatgatgggggagtgtgattgggtggtgaaaccgcttttaccgtcaaagttgttgcacagattagagagtctggaagaactatgttgttctcatatgcgggcaatgaaatatgtgtttggatttgaagggcatgaaccacaacacgttgtcttgacgaggctgagaatgatttcattgagatccatgaactgcttaataaacatatgggatggtcctgctccatctggaatcttccagagcctcaaaatcttttccttggttaattgccagaaactggaatatctcttcacatctgatgtagctcgatgtctttcgcaattggaagacgttttggtggaggattgcgatagcttggacagaataattgaagcgagtgaggaaatagagagcaacaagatcgttcttccacagttgaagaacttgggtttaaaacgtcttccaaagctcacaaggctgtccagtacaagcagcagtactattgatattgaaatcgagtgccctacattggaacacttatatgtctctgcgtgcccccagttatcaatctctgcttctgatttcaacagcagcaacgaagtccaactagatgatcaccagctcacgcttaaaggtgagttacagctcacgctttccacttgggacgtggtaccacaggggcttttaggggagaaggagagaggcagctgcatcgaggaggagataaggttggaagtcttgtggtcgttgaagtcttcagaaaccataaacctgcaaacaaaccataagaatgagaagaaagggtcagatgtatcaaaacagggcgaatttccaacccgctttgttgccactgaagtagatcggccggcctttgctatcgtcaatcacaatctcggacaagcaggataa

Protein Analysis

1201

Amino Acids

135.21

Weight (kDa)

5.88

Isoelectric Point (pI)

50.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 348, 917
AasI GACNNNNNNGTC 1 cut(s) 2605
Acc36I ACCTGC 3 cut(s) 1288, 2221, 3477
Acc65I GGTACC 1 cut(s) 3367
AccB1I GGYRCC 1 cut(s) 3367
AccB7I CCANNNNNTGG 2 cut(s) 1042, 2995
AccI GTMKAC 1 cut(s) 93
AciI CCGC 7 cut(s) 824, 2153, 2343, 2405, 2753, 2818, 3535
AclI AACGTT 1 cut(s) 2268
AclWI GGATC 7 cut(s) 350, 363, 834, 904, 1558, 1780, 2895
AcoI YGGCCR 4 cut(s) 483, 1584, 1612, 3560
AcsI RAATTY 6 cut(s) 512, 963, 1059, 1997, 2026, 3524
AcuI CTGAAG 7 cut(s) 67, 161, 287, 333, 1730, 3438, 3570
AcyI GRCGYC 1 cut(s) 1353
AfaI GTAC 7 cut(s) 570, 2109, 2114, 2334, 3184, 3196, 3369
AfiI CCNNNNNNNGG 8 cut(s) 747, 748, 1042, 1294, 2342, 2506, 2995, 3226
AflII CTTAAG 1 cut(s) 2711
AflIII ACRYGT 3 cut(s) 724, 1453, 2863
AhdI GACNNNNNGTC 1 cut(s) 1357
AjiI CACGTC 1 cut(s) 3364
AjnI CCWGG 2 cut(s) 227, 2692
AjuI GAANNNNNNNTTGG 8 cut(s) 247, 279, 992, 1024, 1044, 1076, 1349, 1381
Alw21I GWGCWC 4 cut(s) 14, 311, 736, 1492
Alw26I GTCTC 8 cut(s) 209, 1190, 1278, 1880, 1969, 2057, 2663, 3247
Alw44I GTGCAC 1 cut(s) 732
AlwI GGATC 7 cut(s) 350, 363, 834, 904, 1558, 1780, 2895
AlwNI CAGNNNCTG 1 cut(s) 2995
Ama87I CYCGRG 2 cut(s) 7, 2504
AoxI GGCC 7 cut(s) 3, 483, 572, 1584, 1612, 3560, 3564
ApaLI GTGCAC 1 cut(s) 732
ApoI RAATTY 6 cut(s) 512, 963, 1059, 1997, 2026, 3524
AseI ATTAAT 1 cut(s) 2201
Asp700I GAANNNNTTC 1 cut(s) 2890
Asp718I GGTACC 1 cut(s) 3367
AspS9I GGNCC 1 cut(s) 2933
AsuC2I CCSGG 2 cut(s) 100, 2653
AsuNHI GCTAGC 1 cut(s) 2186
AvaI CYCGRG 2 cut(s) 7, 2504
AvaII GGWCC 1 cut(s) 2933
BaeGI GKGCMC 4 cut(s) 736, 1219, 3221, 3254
BalI TGGCCA 3 cut(s) 485, 1586, 1614
BamHI GGATCC 1 cut(s) 355
BanI GGYRCC 1 cut(s) 3367
BanII GRGCYC 2 cut(s) 14, 874
BarI GAAGNNNNNNTAC 2 cut(s) 2542, 2574
BbsI GAAGAC 7 cut(s) 713, 1245, 1419, 2362, 3051, 3149, 3444
Bbv12I GWGCWC 4 cut(s) 14, 311, 736, 1492
BccI CCATC 8 cut(s) 637, 1529, 1604, 1654, 1873, 2719, 2924, 2950
BceAI ACGGC 3 cut(s) 587, 2222, 2335
BcgI CGANNNNNNTGC 4 cut(s) 3100, 3134, 3391, 3425
BciT130I CCWGG 2 cut(s) 229, 2694
BciVI GTATCC 3 cut(s) 124, 793, 2318
BclI TGATCA 3 cut(s) 760, 2397, 3310
BcnI CCSGG 2 cut(s) 100, 2653
BcoDI GTCTC 8 cut(s) 209, 1190, 1278, 1880, 1969, 2057, 2663, 3247
BfaI CTAG 7 cut(s) 944, 1137, 1170, 1503, 2187, 2601, 3305
BfmI CTRYAG 1 cut(s) 1605
BfrI CTTAAG 1 cut(s) 2711
BfuAI ACCTGC 3 cut(s) 1288, 2221, 3477
BfuI GTATCC 3 cut(s) 124, 793, 2318
BglII AGATCT 1 cut(s) 1831
BmcAI AGTACT 2 cut(s) 2109, 3196
Bme1390I CCNGG 4 cut(s) 100, 229, 2653, 2694
Bme18I GGWCC 1 cut(s) 2933
BmeRI GACNNNNNGTC 1 cut(s) 1357
BmeT110I CYCGRG 2 cut(s) 7, 2504
BmgBI CACGTC 1 cut(s) 3364
BmgT120I GGNCC 1 cut(s) 2933
BmiI GGNNCC 2 cut(s) 357, 3369
BmrFI CCNGG 4 cut(s) 100, 229, 2653, 2694
BmrI ACTGGG 2 cut(s) 1184, 3250
BmsI GCATC 8 cut(s) 177, 430, 1078, 1551, 1607, 1654, 2452, 3417
BmtI GCTAGC 1 cut(s) 2190
BmuI ACTGGG 2 cut(s) 1184, 3250
BpiI GAAGAC 7 cut(s) 713, 1245, 1419, 2362, 3051, 3149, 3444
BpuEI CTTGAG 5 cut(s) 1286, 1361, 1979, 2061, 2522
BpuMI CCSGG 2 cut(s) 100, 2653
BsaAI YACGTR 1 cut(s) 2705
BsaHI GRCGYC 1 cut(s) 1353
BsaI GGTCTC 1 cut(s) 1190
BsaJI CCNNGG 6 cut(s) 169, 714, 1041, 2485, 2518, 2976
BsaXI ACNNNNNCTCC 4 cut(s) 839, 869, 3410, 3440
Bsc4I CCNNNNNNNGG 8 cut(s) 747, 748, 1042, 1294, 2342, 2506, 2995, 3226
Bse118I RCCGGY 1 cut(s) 3562
Bse1I ACTGG 6 cut(s) 1190, 1247, 1849, 3000, 3180, 3256
Bse3DI GCAATG 3 cut(s) 439, 1593, 2829
BseBI CCWGG 2 cut(s) 229, 2694
BseDI CCNNGG 6 cut(s) 169, 714, 1041, 2485, 2518, 2976
BseGI GGATG 9 cut(s) 169, 192, 289, 1401, 1540, 1566, 1598, 1669, 2935
BseLI CCNNNNNNNGG 8 cut(s) 747, 748, 1042, 1294, 2342, 2506, 2995, 3226
BseMI GCAATG 3 cut(s) 439, 1593, 2829
BseMII CTCAG 4 cut(s) 68, 91, 1695, 2873
BseNI ACTGG 6 cut(s) 1190, 1247, 1849, 3000, 3180, 3256
BseRI GAGGAG 7 cut(s) 42, 863, 1310, 2341, 2681, 3428, 3431
BseSI GKGCMC 4 cut(s) 736, 1219, 3221, 3254
BseX3I CGGCCG 1 cut(s) 3560
BseYI CCCAGC 2 cut(s) 832, 968
BsgI GTGCAG 2 cut(s) 255, 2268
Bsh1285I CGRYCG 1 cut(s) 3563
BshFI GGCC 7 cut(s) 5, 485, 574, 1586, 1614, 3562, 3566
BshNI GGYRCC 1 cut(s) 3367
BsiEI CGRYCG 1 cut(s) 3563
BsiHKAI GWGCWC 4 cut(s) 14, 311, 736, 1492
BsiHKCI CYCGRG 2 cut(s) 7, 2504
BsiSI CCGG 3 cut(s) 100, 2652, 3563
BslFI GGGAC 3 cut(s) 1552, 2303, 3374
BslI CCNNNNNNNGG 8 cut(s) 747, 748, 1042, 1294, 2342, 2506, 2995, 3226
BsmAI GTCTC 8 cut(s) 209, 1190, 1278, 1880, 1969, 2057, 2663, 3247
BsmBI CGTCTC 1 cut(s) 1969
BsmFI GGGAC 3 cut(s) 1552, 2303, 3374
BsmI GAATGC 2 cut(s) 2188, 2258
BsnI GGCC 7 cut(s) 5, 485, 574, 1586, 1614, 3562, 3566
Bso31I GGTCTC 1 cut(s) 1190
BsoBI CYCGRG 2 cut(s) 7, 2504
Bsp1286I GDGCHC 8 cut(s) 14, 311, 736, 874, 1219, 1492, 3221, 3254
Bsp1407I TGTACA 1 cut(s) 2112
Bsp19I CCATGG 2 cut(s) 714, 1041
BspACI CCGC 7 cut(s) 824, 2153, 2343, 2405, 2753, 2818, 3535
BspANI GGCC 7 cut(s) 5, 485, 574, 1586, 1614, 3562, 3566
BspCNI CTCAG 4 cut(s) 67, 90, 1694, 2874
BspLI GGNNCC 2 cut(s) 357, 3369
BspMI ACCTGC 3 cut(s) 1288, 2221, 3477
BspOI GCTAGC 1 cut(s) 2190
BspPI GGATC 7 cut(s) 350, 363, 834, 904, 1558, 1780, 2895
BspT107I GGYRCC 1 cut(s) 3367
BspTI CTTAAG 1 cut(s) 2711
BspTNI GGTCTC 1 cut(s) 1190
BsrDI GCAATG 3 cut(s) 439, 1593, 2829
BsrFI RCCGGY 1 cut(s) 3562
BsrGI TGTACA 1 cut(s) 2112
BsrI ACTGG 6 cut(s) 1190, 1247, 1849, 3000, 3180, 3256
BssAI RCCGGY 1 cut(s) 3562
BssECI CCNNGG 6 cut(s) 169, 714, 1041, 2485, 2518, 2976
BssNI GRCGYC 1 cut(s) 1353
BssT1I CCWWGG 4 cut(s) 169, 714, 1041, 2976
Bst2UI CCWGG 2 cut(s) 229, 2694
Bst4CI ACNGT 6 cut(s) 2068, 2112, 2486, 2519, 2763, 3132
Bst6I CTCTTC 4 cut(s) 31, 39, 2631, 3011
BstACI GRCGYC 1 cut(s) 1353
BstAFI CTTAAG 1 cut(s) 2711
BstAPI GCANNNNNTGC 2 cut(s) 187, 1710
BstAUI TGTACA 1 cut(s) 2112
BstBAI YACGTR 1 cut(s) 2705
BstC8I GCNNGC 6 cut(s) 1715, 2188, 2258, 2820, 3250, 3564
BstDEI CTNAG 8 cut(s) 54, 77, 922, 1681, 1828, 1835, 1967, 2882
BstDSI CCRYGG 4 cut(s) 714, 1041, 2485, 2518
BstEII GGTNACC 1 cut(s) 2480
BstENI CCTNNNNNAGG 2 cut(s) 1292, 2504
BstF5I GGATG 9 cut(s) 169, 192, 289, 1401, 1540, 1566, 1598, 1669, 2935
BstMAI GTCTC 8 cut(s) 209, 1190, 1278, 1880, 1969, 2057, 2663, 3247
BstMCI CGRYCG 1 cut(s) 3563
BstMWI GCNNNNNNNGC 6 cut(s) 187, 269, 1202, 1710, 1845, 3172
BstNI CCWGG 2 cut(s) 229, 2694
BstNSI RCATGY 2 cut(s) 728, 1457
BstPI GGTNACC 1 cut(s) 2480
BstSCI CCNGG 4 cut(s) 98, 227, 2651, 2692
BstSFI CTRYAG 1 cut(s) 1605
BstSLI GKGCMC 4 cut(s) 736, 1219, 3221, 3254
BstSNI TACGTA 1 cut(s) 2705
BstV2I GAAGAC 7 cut(s) 713, 1245, 1419, 2362, 3051, 3149, 3444
BstX2I RGATCY 7 cut(s) 355, 826, 909, 1550, 1785, 1831, 2900
BstXI CCANNNNNNTGG 1 cut(s) 1729
BstYI RGATCY 7 cut(s) 355, 826, 909, 1550, 1785, 1831, 2900
BstZI CGGCCG 1 cut(s) 3560
BsuI GTATCC 3 cut(s) 124, 793, 2318
BsuRI GGCC 7 cut(s) 5, 485, 574, 1586, 1614, 3562, 3566
BtgI CCRYGG 4 cut(s) 714, 1041, 2485, 2518
BtrI CACGTC 1 cut(s) 3364
BtsCI GGATG 9 cut(s) 169, 192, 289, 1401, 1540, 1566, 1598, 1669, 2935
BtsI GCAGTG 2 cut(s) 326, 1856
BtsIMutI CAGTG 8 cut(s) 62, 311, 326, 736, 1842, 1856, 2446, 3546
BveI ACCTGC 3 cut(s) 1288, 2221, 3477
Cac8I GCNNGC 6 cut(s) 1715, 2188, 2258, 2820, 3250, 3564
CaiI CAGNNNCTG 1 cut(s) 2995
Cfr10I RCCGGY 1 cut(s) 3562
Cfr13I GGNCC 1 cut(s) 2933
CseI GACGC 3 cut(s) 824, 1361, 1986
Csp6I GTAC 7 cut(s) 569, 2108, 2113, 2333, 3183, 3195, 3368
CviQI GTAC 7 cut(s) 569, 2108, 2113, 2333, 3183, 3195, 3368
DdeI CTNAG 8 cut(s) 54, 77, 922, 1681, 1828, 1835, 1967, 2882
DraI TTTAAA 2 cut(s) 2220, 3150
DrdI GACNNNNNNGTC 1 cut(s) 2605
DriI GACNNNNNGTC 1 cut(s) 1357
DseDI GACNNNNNNGTC 1 cut(s) 2605
EaeI YGGCCR 4 cut(s) 483, 1584, 1612, 3560
EagI CGGCCG 1 cut(s) 3560
Eam1104I CTCTTC 4 cut(s) 31, 39, 2631, 3011
Eam1105I GACNNNNNGTC 1 cut(s) 1357
EarI CTCTTC 4 cut(s) 31, 39, 2631, 3011
EciI GGCGGA 1 cut(s) 2420
Ecl136II GAGCTC 1 cut(s) 12
EclXI CGGCCG 1 cut(s) 3560
Eco105I TACGTA 1 cut(s) 2705
Eco130I CCWWGG 4 cut(s) 169, 714, 1041, 2976
Eco24I GRGCYC 2 cut(s) 14, 874
Eco31I GGTCTC 1 cut(s) 1190
Eco32I GATATC 1 cut(s) 2085
Eco47I GGWCC 1 cut(s) 2933
Eco52I CGGCCG 1 cut(s) 3560
Eco53kI GAGCTC 1 cut(s) 12
Eco57I CTGAAG 7 cut(s) 67, 161, 287, 333, 1730, 3438, 3570
Eco88I CYCGRG 2 cut(s) 7, 2504
Eco91I GGTNACC 1 cut(s) 2480
EcoICRI GAGCTC 1 cut(s) 12
EcoNI CCTNNNNNAGG 2 cut(s) 1292, 2504
EcoO65I GGTNACC 1 cut(s) 2480
EcoRI GAATTC 1 cut(s) 963
EcoRII CCWGG 2 cut(s) 227, 2692
EcoRV GATATC 1 cut(s) 2085
EcoT14I CCWWGG 4 cut(s) 169, 714, 1041, 2976
EcoT22I ATGCAT 2 cut(s) 545, 1566
EcoT38I GRGCYC 2 cut(s) 14, 874
ErhI CCWWGG 4 cut(s) 169, 714, 1041, 2976
Esp3I CGTCTC 1 cut(s) 1969
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 1349, 1381
FaqI GGGAC 3 cut(s) 1552, 2303, 3374
FauI CCCGC 3 cut(s) 2146, 2811, 3542
FauNDI CATATG 2 cut(s) 2814, 2924
FbaI TGATCA 3 cut(s) 760, 2397, 3310
FblI GTMKAC 1 cut(s) 93
FokI GGATG 9 cut(s) 176, 199, 296, 1388, 1547, 1573, 1585, 1676, 2942
FriOI GRGCYC 2 cut(s) 14, 874
FseI GGCCGGCC 1 cut(s) 3566
FspBI CTAG 7 cut(s) 944, 1137, 1170, 1503, 2187, 2601, 3305
GsaI CCCAGC 2 cut(s) 836, 972
HaeIII GGCC 7 cut(s) 5, 485, 574, 1586, 1614, 3562, 3566
HapII CCGG 3 cut(s) 100, 2652, 3563
HgaI GACGC 3 cut(s) 824, 1361, 1986
Hin1I GRCGYC 1 cut(s) 1353
HincII GTYRAC 1 cut(s) 1459
HindII GTYRAC 1 cut(s) 1459
HindIII AAGCTT 4 cut(s) 1515, 1715, 1893, 1955
HpaII CCGG 3 cut(s) 100, 2652, 3563
Hpy166II GTNNAC 3 cut(s) 94, 734, 1459
Hpy8I GTNNAC 3 cut(s) 94, 734, 1459
Hpy99I CGWCG 1 cut(s) 1355
HpyCH4III ACNGT 6 cut(s) 2068, 2112, 2486, 2519, 2763, 3132
HpyCH4IV ACGT 6 cut(s) 2268, 2704, 2865, 3048, 3154, 3363
HpyF10VI GCNNNNNNNGC 6 cut(s) 187, 269, 1202, 1710, 1845, 3172
HpyF3I CTNAG 8 cut(s) 54, 77, 922, 1681, 1828, 1835, 1967, 2882
HpySE526I ACGT 6 cut(s) 2268, 2704, 2865, 3048, 3154, 3363
Hsp92I GRCGYC 1 cut(s) 1353
KpnI GGTACC 1 cut(s) 3371
KroI GCCGGC 1 cut(s) 3562
KroNI GCCGGC 1 cut(s) 3564
Ksp22I TGATCA 3 cut(s) 760, 2397, 3310
LmnI GCTCC 5 cut(s) 17, 55, 850, 2668, 2944
LweI GCATC 8 cut(s) 177, 430, 1078, 1551, 1607, 1654, 2452, 3417
MaeI CTAG 7 cut(s) 944, 1137, 1170, 1503, 2187, 2601, 3305
MaeII ACGT 6 cut(s) 2268, 2704, 2865, 3048, 3154, 3363
MaeIII GTNAC 6 cut(s) 1346, 1498, 1982, 2446, 2480, 3336
MfeI CAATTG 2 cut(s) 216, 3038
MflI RGATCY 7 cut(s) 355, 826, 909, 1550, 1785, 1831, 2900
MhlI GDGCHC 8 cut(s) 14, 311, 736, 874, 1219, 1492, 3221, 3254
MlsI TGGCCA 3 cut(s) 485, 1586, 1614
MluNI TGGCCA 3 cut(s) 485, 1586, 1614
MlyI GAGTC 4 cut(s) 1491, 1881, 2529, 2797
MmeI TCCRAC 5 cut(s) 2019, 2622, 3325, 3408, 3554
Mox20I TGGCCA 3 cut(s) 485, 1586, 1614
Mph1103I ATGCAT 2 cut(s) 545, 1566
MroNI GCCGGC 1 cut(s) 3562
MroXI GAANNNNTTC 1 cut(s) 2890
MscI TGGCCA 3 cut(s) 485, 1586, 1614
MslI CAYNNNNRTG 4 cut(s) 729, 2517, 3237, 3486
Msp20I TGGCCA 3 cut(s) 485, 1586, 1614
MspA1I CMGCKG 1 cut(s) 3405
MspCI CTTAAG 1 cut(s) 2711
MspI CCGG 3 cut(s) 100, 2652, 3563
MspR9I CCNGG 4 cut(s) 100, 229, 2653, 2694
MssI GTTTAAAC 1 cut(s) 2220
MunI CAATTG 2 cut(s) 216, 3038
Mva1269I GAATGC 2 cut(s) 2188, 2258
MvaI CCWGG 2 cut(s) 229, 2694
MwoI GCNNNNNNNGC 6 cut(s) 187, 269, 1202, 1710, 1845, 3172
NaeI GCCGGC 1 cut(s) 3564
NciI CCSGG 2 cut(s) 100, 2653
NcoI CCATGG 2 cut(s) 714, 1041
NdeI CATATG 2 cut(s) 2814, 2924
NgoMIV GCCGGC 1 cut(s) 3562
NheI GCTAGC 1 cut(s) 2186
NlaIV GGNNCC 2 cut(s) 357, 3369
NmeAIII GCCGAG 1 cut(s) 615
NmuCI GTSAC 3 cut(s) 1346, 2446, 2480
NsiI ATGCAT 2 cut(s) 545, 1566
NspI RCATGY 2 cut(s) 728, 1457
PacI TTAATTAA 1 cut(s) 2496
PaeR7I CTCGAG 2 cut(s) 7, 2504
PciI ACATGT 2 cut(s) 724, 1453
PctI GAATGC 2 cut(s) 2188, 2258
PdiI GCCGGC 1 cut(s) 3564
PdmI GAANNNNTTC 1 cut(s) 2890
PfeI GAWTC 7 cut(s) 224, 298, 503, 614, 1963, 2555, 2949
PflFI GACNNNGTC 1 cut(s) 2366
PflMI CCANNNNNTGG 2 cut(s) 1042, 2995
PleI GAGTC 4 cut(s) 1490, 1881, 2529, 2796
PmeI GTTTAAAC 1 cut(s) 2220
PpsI GAGTC 4 cut(s) 1490, 1881, 2529, 2796
Ppu21I YACGTR 1 cut(s) 2705
PscI ACATGT 2 cut(s) 724, 1453
PshBI ATTAAT 1 cut(s) 2201
PsiI TTATAA 2 cut(s) 348, 917
Psp124BI GAGCTC 1 cut(s) 14
Psp1406I AACGTT 1 cut(s) 2268
Psp6I CCWGG 2 cut(s) 227, 2692
PspEI GGTNACC 1 cut(s) 2480
PspFI CCCAGC 2 cut(s) 832, 968
PspGI CCWGG 2 cut(s) 227, 2692
PspN4I GGNNCC 2 cut(s) 357, 3369
PspPI GGNCC 1 cut(s) 2933
PspXI VCTCGAGB 1 cut(s) 7
PstNI CAGNNNCTG 1 cut(s) 2995
PsuI RGATCY 7 cut(s) 355, 826, 909, 1550, 1785, 1831, 2900
PsyI GACNNNGTC 1 cut(s) 2366
PvuII CAGCTG 1 cut(s) 3405
RigI GGCCGGCC 1 cut(s) 3566
RsaI GTAC 7 cut(s) 570, 2109, 2114, 2334, 3184, 3196, 3369
RsaNI GTAC 7 cut(s) 569, 2108, 2113, 2333, 3183, 3195, 3368
RseI CAYNNNNRTG 4 cut(s) 729, 2517, 3237, 3486
SacI GAGCTC 1 cut(s) 14
Sau96I GGNCC 1 cut(s) 2933
ScaI AGTACT 2 cut(s) 2109, 3196
SchI GAGTC 4 cut(s) 1491, 1881, 2529, 2797
ScrFI CCNGG 4 cut(s) 100, 229, 2653, 2694
SduI GDGCHC 8 cut(s) 14, 311, 736, 874, 1219, 1492, 3221, 3254
SfaNI GCATC 8 cut(s) 177, 430, 1078, 1551, 1607, 1654, 2452, 3417
SfcI CTRYAG 1 cut(s) 1605
Sfr274I CTCGAG 2 cut(s) 7, 2504
SinI GGWCC 1 cut(s) 2933
SlaI CTCGAG 2 cut(s) 7, 2504
SmiMI CAYNNNNRTG 4 cut(s) 729, 2517, 3237, 3486
SmlI CTYRAG 8 cut(s) 7, 1265, 1340, 1958, 2076, 2504, 2537, 2711
SmoI CTYRAG 8 cut(s) 7, 1265, 1340, 1958, 2076, 2504, 2537, 2711
SnaBI TACGTA 1 cut(s) 2705
SsiI CCGC 7 cut(s) 824, 2153, 2343, 2405, 2753, 2818, 3535
SspMI CTAG 7 cut(s) 944, 1137, 1170, 1503, 2187, 2601, 3305
SstI GAGCTC 1 cut(s) 14
StyD4I CCNGG 4 cut(s) 98, 227, 2651, 2692
StyI CCWWGG 4 cut(s) 169, 714, 1041, 2976
TaaI ACNGT 6 cut(s) 2068, 2112, 2486, 2519, 2763, 3132
TaiI ACGT 6 cut(s) 2271, 2707, 2868, 3051, 3157, 3366
TatI WGTACW 4 cut(s) 2107, 2112, 3182, 3194
TauI GCSGC 1 cut(s) 2346
TfiI GAWTC 7 cut(s) 224, 298, 503, 614, 1963, 2555, 2949
TscAI CASTG 8 cut(s) 62, 311, 333, 736, 1849, 1863, 2446, 3553
TseFI GTSAC 3 cut(s) 1346, 2446, 2480
Tsp45I GTSAC 3 cut(s) 1346, 2446, 2480
TspGWI ACGGA 2 cut(s) 902, 1394
TspRI CASTG 8 cut(s) 62, 311, 333, 736, 1849, 1863, 2446, 3553
Tth111I GACNNNGTC 1 cut(s) 2366
Van91I CCANNNNNTGG 2 cut(s) 1042, 2995
Vha464I CTTAAG 1 cut(s) 2711
VneI GTGCAC 1 cut(s) 732
VpaK11BI GGWCC 1 cut(s) 2933
VspI ATTAAT 1 cut(s) 2201
XagI CCTNNNNNAGG 2 cut(s) 1292, 2504
XapI RAATTY 6 cut(s) 512, 963, 1059, 1997, 2026, 3524
XceI RCATGY 2 cut(s) 728, 1457
XcmI CCANNNNNNNNNTGG 1 cut(s) 3361
XhoI CTCGAG 2 cut(s) 7, 2504
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 2890
XspI CTAG 7 cut(s) 944, 1137, 1170, 1503, 2187, 2601, 3305
ZrmI AGTACT 2 cut(s) 2109, 3196
Zsp2I ATGCAT 2 cut(s) 545, 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.