Rroxscaffold_6G00398270

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000085
Physical Location & Seq
Forward (+)
20139869 .. 20146580
6712 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00398270.1

Sequence Viewer

Length: 1791 bp
ATGGTCTCCAGCTCCCAAACACTTCCTTGGTCATCAGCTCCTCAGTGGAAGCATGATGTGTTTCTCAGCTTCAGGGGTGAAGACACTCGGAAGGGTATTGTATCCTCTTTATACCATGAATTGAAAACCAGAGGAATACAAACATTCATGGATGACCAAGGGCTTCAGCAAGGGATGCCTATTTCTCCAAGTCTCCTAACAGCGATTGAGGAATCCAGGTCTGCAGTCTTTCTTCTATCCCCAAACTATGCTTCTTCTACATGGTGTTTGGATGAACTTGCAAAGATTCTTCAATGCTCTGAAGCCAACAAGACACTGCTTCTGCCAATTTTTTATAATGTGGATCCCTCTCATGTGCGACATCAAGGGGGAAGTTTTGCAGAAGCCTTCACTAAGCACGAAGAGACGTTTGTAGAGAAGGTGAAGAAGTGGAGAGCTGCTTTAACACAAGTGGCCAATCTCTCTGGGTTGGATTCAAACAAATTTGGGTCTGACAGAGAGCTTGTCCAACGCATTGTGGAACTTGTGCGCCGTGATGTAAGGCCTATTTCAATAATGTCGAGCAGCAATTTTGAAGCATTTGAATCAACAAGAAAACCCATGAATGAGCTGATGGAGGCATTAGAAGATGATGAGGTCACTGCCATTGGGGTCTATGGAATGGGAGGGGTTGGGAAGACAACCATGGTGAAACATGTTGGTGCACAAGCCCAAAAAATGGGGCTTTTTGATCATGTGATTATGGCTGTTGTATCCCAAACCCCAGATACAAGAAATATTCAAGGCGCACTGGCGGATATGCTGGGCTTGAAATTGGTGGAGGAGTCAGAAAGTGGACGAGCCGATAGATTGCAGATGGAGATACTTGGAAGAAATAAGATCCTTATAATCTTAGACGACATTTGGAATACACTTGACTTGTCAAGCGTTGGAATTCCCAGCTACAAAGAGCTTCAAATATGCAATTCCAAACTGCTACTCACCACAAGGAGATTGAATGTTTGCCATACCATGGAGAGCCAAGCAAAAATTCATCTCAATATCTTATCAGAAGATGATGCTTGGAACTTGTTTTTGAAGAAGGCAAGAAGGTCTATTCAAAAGTCTACCCTTTTCTATGAAGTAGCCAGAAAGGTAGCTAGAGAATGTGCTGGTCTCCCAGTTGCATTGATTGCAGTTGCGAGGGCACTTGGAGATAAAGATTTTGAAGACTGGAAAGTAGCAGCTCGACAACTTGAGATGTCTCAACCTGCCAACCTTGACGAGGAGAAAGATGTGTTCAAGTGCATTAAGTTGAGCTATGATTACCTTGACAGTGACGACGCCAAGTCTTGCTTCTTGCTTTGCTGCCTATTCCCAGAAGATTATGACATCCGTGTTGAAGACTTGATGAGCTACGGGTTCGGAACAGGGTTGTTTGGACATGTCAACAGCACAATAGAATATGCCAGAGTCAGAGCACATTCGGTTACTAGATACCTTAAAGCTTCTTGTCTGCTTTTGGATGGGATACAAGAAGGATATGTAAGGATGCATGATGTCATTCGAGATATGGCCATATCCATTGCATTCTCTGTAGATGGCTACGCCCCTTTGGTGAAAACTAATCGTCATTTGAAAGATTGGTCGATGGATGAGGACGAAGGCTACTCAGCAATCTCACTAATTGAGAGCAACATTTGCAAGCTTCCCAACAAGTTGGTATGTTCAAAACTTCAGATTTTATTGCTACAAAACAATGCTTATATAAGAGAGATCCCAATAACCTTTTTCAAAGCCCCAATGATTTAA

Protein Analysis

596

Amino Acids

67.09

Weight (kDa)

5.81

Isoelectric Point (pI)

49.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 17 - 184 5.2e-53 TIR domain
TIR_2 PF13676 20 - 116 2.5e-16 TIR domain
NB-ARC PF00931 199 - 363 4.5e-32 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 336, 887
Acc36I ACCTGC 1 cut(s) 1258
AccB7I CCANNNNNTGG 2 cut(s) 718, 1012
AccI GTMKAC 1 cut(s) 1106
AciI CCGC 1 cut(s) 794
AclWI GGATC 4 cut(s) 338, 351, 874, 1750
AcoI YGGCCR 2 cut(s) 453, 1554
AcsI RAATTY 3 cut(s) 482, 933, 1029
AcuI CTGAAG 4 cut(s) 55, 149, 321, 1700
AcyI GRCGYC 1 cut(s) 1323
AfiI CCNNNNNNNGG 3 cut(s) 718, 1012, 1264
AflIII ACRYGT 2 cut(s) 694, 1423
AhdI GACNNNNNGTC 1 cut(s) 1327
AjnI CCWGG 1 cut(s) 215
AjuI GAANNNNNNNTTGG 6 cut(s) 235, 267, 1014, 1046, 1319, 1351
Alw21I GWGCWC 2 cut(s) 706, 1462
Alw26I GTCTC 5 cut(s) 10, 197, 398, 1160, 1248
Alw44I GTGCAC 1 cut(s) 702
AlwI GGATC 4 cut(s) 338, 351, 874, 1750
AoxI GGCC 3 cut(s) 453, 542, 1554
ApaLI GTGCAC 1 cut(s) 702
ApeKI GCWGC 4 cut(s) 437, 564, 1223, 1347
ApoI RAATTY 3 cut(s) 482, 933, 1029
AspLEI GCGC 2 cut(s) 531, 788
AsuHPI GGTGA 5 cut(s) 89, 433, 700, 973, 1609
BaeGI GKGCMC 2 cut(s) 706, 1189
BalI TGGCCA 2 cut(s) 455, 1556
BamHI GGATCC 1 cut(s) 343
BbsI GAAGAC 4 cut(s) 87, 683, 1215, 1389
Bbv12I GWGCWC 2 cut(s) 706, 1462
BbvI GCAGC 4 cut(s) 424, 576, 1235, 1334
BccI CCATC 5 cut(s) 607, 850, 1499, 1574, 1624
BceAI ACGGC 1 cut(s) 516
BciT130I CCWGG 1 cut(s) 217
BciVI GTATCC 3 cut(s) 112, 763, 1503
BclI TGATCA 1 cut(s) 730
BcoDI GTCTC 5 cut(s) 10, 197, 398, 1160, 1248
BfaI CTAG 2 cut(s) 1140, 1473
BfmI CTRYAG 2 cut(s) 222, 1575
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 3 cut(s) 112, 763, 1503
BisI GCNGC 4 cut(s) 438, 565, 1224, 1348
BlsI GCNGC 4 cut(s) 439, 566, 1225, 1349
Bme1390I CCNGG 1 cut(s) 217
BmeRI GACNNNNNGTC 1 cut(s) 1327
BmiI GGNNCC 1 cut(s) 345
BmrFI CCNGG 1 cut(s) 217
BmrI ACTGGG 1 cut(s) 1154
BmsI GCATC 3 cut(s) 165, 1048, 1521
BmuI ACTGGG 1 cut(s) 1154
BpiI GAAGAC 4 cut(s) 87, 683, 1215, 1389
BpuEI CTTGAG 1 cut(s) 1256
BsaHI GRCGYC 1 cut(s) 1323
BsaI GGTCTC 2 cut(s) 10, 1160
BsaJI CCNNGG 4 cut(s) 26, 157, 684, 1011
Bsc4I CCNNNNNNNGG 3 cut(s) 718, 1012, 1264
Bse1I ACTGG 3 cut(s) 795, 1160, 1217
Bse3DI GCAATG 1 cut(s) 1563
BseBI CCWGG 1 cut(s) 217
BseDI CCNNGG 4 cut(s) 26, 157, 684, 1011
BseGI GGATG 7 cut(s) 157, 180, 277, 1371, 1510, 1536, 1639
BseLI CCNNNNNNNGG 3 cut(s) 718, 1012, 1264
BseMI GCAATG 1 cut(s) 1563
BseMII CTCAG 3 cut(s) 56, 79, 1665
BseNI ACTGG 3 cut(s) 795, 1160, 1217
BseRI GAGGAG 3 cut(s) 30, 836, 1280
BseSI GKGCMC 2 cut(s) 706, 1189
BseXI GCAGC 4 cut(s) 424, 576, 1235, 1334
BseYI CCCAGC 2 cut(s) 802, 938
BshFI GGCC 3 cut(s) 455, 544, 1556
BsiHKAI GWGCWC 2 cut(s) 706, 1462
BslI CCNNNNNNNGG 3 cut(s) 718, 1012, 1264
BsmAI GTCTC 5 cut(s) 10, 197, 398, 1160, 1248
BsmBI CGTCTC 1 cut(s) 398
BsmI GAATGC 1 cut(s) 1568
BsnI GGCC 3 cut(s) 455, 544, 1556
Bso31I GGTCTC 2 cut(s) 10, 1160
Bsp1286I GDGCHC 3 cut(s) 706, 1189, 1462
Bsp143I GATC 4 cut(s) 343, 730, 879, 1755
Bsp19I CCATGG 2 cut(s) 684, 1011
BspACI CCGC 1 cut(s) 794
BspANI GGCC 3 cut(s) 455, 544, 1556
BspCNI CTCAG 3 cut(s) 55, 78, 1664
BspLI GGNNCC 1 cut(s) 345
BspMAI CTGCAG 1 cut(s) 226
BspMI ACCTGC 1 cut(s) 1258
BspPI GGATC 4 cut(s) 338, 351, 874, 1750
BspTNI GGTCTC 2 cut(s) 10, 1160
BsrDI GCAATG 1 cut(s) 1563
BsrI ACTGG 3 cut(s) 795, 1160, 1217
BssECI CCNNGG 4 cut(s) 26, 157, 684, 1011
BssMI GATC 4 cut(s) 343, 730, 879, 1755
BssNI GRCGYC 1 cut(s) 1323
BssT1I CCWWGG 4 cut(s) 26, 157, 684, 1011
Bst2UI CCWGG 1 cut(s) 217
Bst4CI ACNGT 1 cut(s) 1316
Bst6I CTCTTC 1 cut(s) 396
BstACI GRCGYC 1 cut(s) 1323
BstAPI GCANNNNNTGC 3 cut(s) 175, 1172, 1680
BstC8I GCNNGC 1 cut(s) 1685
BstDEI CTNAG 5 cut(s) 42, 65, 393, 892, 1651
BstDSI CCRYGG 2 cut(s) 684, 1011
BstENI CCTNNNNNAGG 1 cut(s) 1262
BstF5I GGATG 7 cut(s) 157, 180, 277, 1371, 1510, 1536, 1639
BstHHI GCGC 2 cut(s) 531, 788
BstKTI GATC 4 cut(s) 346, 733, 882, 1758
BstMAI GTCTC 5 cut(s) 10, 197, 398, 1160, 1248
BstMBI GATC 4 cut(s) 343, 730, 879, 1755
BstMWI GCNNNNNNNGC 3 cut(s) 175, 1172, 1680
BstNI CCWGG 1 cut(s) 217
BstNSI RCATGY 2 cut(s) 698, 1427
BstSCI CCNGG 1 cut(s) 215
BstSFI CTRYAG 2 cut(s) 222, 1575
BstSLI GKGCMC 2 cut(s) 706, 1189
BstV1I GCAGC 4 cut(s) 424, 576, 1235, 1334
BstV2I GAAGAC 4 cut(s) 87, 683, 1215, 1389
BstX2I RGATCY 3 cut(s) 343, 879, 1755
BstXI CCANNNNNNTGG 1 cut(s) 1699
BstYI RGATCY 3 cut(s) 343, 879, 1755
BsuI GTATCC 3 cut(s) 112, 763, 1503
BsuRI GGCC 3 cut(s) 455, 544, 1556
BtgI CCRYGG 2 cut(s) 684, 1011
BtsCI GGATG 7 cut(s) 157, 180, 277, 1371, 1510, 1536, 1639
BtsI GCAGTG 2 cut(s) 314, 639
BtsIMutI CAGTG 5 cut(s) 50, 314, 639, 788, 1321
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 1 cut(s) 1685
CfoI GCGC 2 cut(s) 531, 788
CseI GACGC 1 cut(s) 1331
DdeI CTNAG 5 cut(s) 42, 65, 393, 892, 1651
DpnI GATC 4 cut(s) 345, 732, 881, 1757
DpnII GATC 4 cut(s) 343, 730, 879, 1755
DriI GACNNNNNGTC 1 cut(s) 1327
EaeI YGGCCR 2 cut(s) 453, 1554
Eam1104I CTCTTC 1 cut(s) 396
Eam1105I GACNNNNNGTC 1 cut(s) 1327
EarI CTCTTC 1 cut(s) 396
EciI GGCGGA 1 cut(s) 809
Eco130I CCWWGG 4 cut(s) 26, 157, 684, 1011
Eco147I AGGCCT 1 cut(s) 544
Eco31I GGTCTC 2 cut(s) 10, 1160
Eco57I CTGAAG 4 cut(s) 55, 149, 321, 1700
EcoNI CCTNNNNNAGG 1 cut(s) 1262
EcoRI GAATTC 1 cut(s) 933
EcoRII CCWGG 1 cut(s) 215
EcoT14I CCWWGG 4 cut(s) 26, 157, 684, 1011
EcoT22I ATGCAT 1 cut(s) 1536
ErhI CCWWGG 4 cut(s) 26, 157, 684, 1011
Esp3I CGTCTC 1 cut(s) 398
FalI AAGNNNNNCTT 2 cut(s) 1319, 1351
FbaI TGATCA 1 cut(s) 730
FblI GTMKAC 1 cut(s) 1106
Fnu4HI GCNGC 4 cut(s) 438, 565, 1224, 1348
FokI GGATG 7 cut(s) 164, 187, 284, 1358, 1517, 1543, 1646
Fsp4HI GCNGC 4 cut(s) 438, 565, 1224, 1348
FspBI CTAG 2 cut(s) 1140, 1473
GlaI GCGC 2 cut(s) 530, 787
GluI GCNGC 4 cut(s) 438, 565, 1224, 1348
GsaI CCCAGC 2 cut(s) 806, 942
HaeIII GGCC 3 cut(s) 455, 544, 1556
HgaI GACGC 1 cut(s) 1331
HhaI GCGC 2 cut(s) 531, 788
Hin1I GRCGYC 1 cut(s) 1323
Hin6I GCGC 2 cut(s) 529, 786
HinP1I GCGC 2 cut(s) 529, 786
HincII GTYRAC 1 cut(s) 1429
HindII GTYRAC 1 cut(s) 1429
HindIII AAGCTT 2 cut(s) 1485, 1685
HinfI GANTC 6 cut(s) 212, 286, 473, 584, 824, 1452
HphI GGTGA 5 cut(s) 89, 433, 700, 973, 1609
Hpy166II GTNNAC 4 cut(s) 704, 836, 1107, 1429
Hpy188I TCNGA 8 cut(s) 90, 301, 493, 829, 1051, 1406, 1457, 1719
Hpy188III TCNNGA 1 cut(s) 1547
Hpy8I GTNNAC 4 cut(s) 704, 836, 1107, 1429
Hpy99I CGWCG 1 cut(s) 1325
HpyAV CCTTC 7 cut(s) 85, 397, 412, 1075, 1083, 1511, 1637
HpyCH4III ACNGT 1 cut(s) 1316
HpyCH4IV ACGT 1 cut(s) 407
HpyF10VI GCNNNNNNNGC 3 cut(s) 175, 1172, 1680
HpyF3I CTNAG 5 cut(s) 42, 65, 393, 892, 1651
HpySE526I ACGT 1 cut(s) 407
Hsp92I GRCGYC 1 cut(s) 1323
HspAI GCGC 2 cut(s) 529, 786
Ksp22I TGATCA 1 cut(s) 730
Kzo9I GATC 4 cut(s) 343, 730, 879, 1755
LmnI GCTCC 2 cut(s) 17, 43
Lsp1109I GCAGC 4 cut(s) 424, 576, 1235, 1334
LweI GCATC 3 cut(s) 165, 1048, 1521
MaeI CTAG 2 cut(s) 1140, 1473
MaeII ACGT 1 cut(s) 407
MaeIII GTNAC 3 cut(s) 637, 1316, 1468
MalI GATC 4 cut(s) 345, 732, 881, 1757
MboI GATC 4 cut(s) 343, 730, 879, 1755
MflI RGATCY 3 cut(s) 343, 879, 1755
MhlI GDGCHC 3 cut(s) 706, 1189, 1462
MlsI TGGCCA 2 cut(s) 455, 1556
MluCI AATT 9 cut(s) 119, 327, 482, 568, 812, 933, 964, 1029, 1665
MluNI TGGCCA 2 cut(s) 455, 1556
MlyI GAGTC 2 cut(s) 833, 1461
MmeI TCCRAC 3 cut(s) 450, 532, 910
Mox20I TGGCCA 2 cut(s) 455, 1556
Mph1103I ATGCAT 1 cut(s) 1536
MscI TGGCCA 2 cut(s) 455, 1556
MseI TTAA 4 cut(s) 443, 1290, 1482, 1789
MslI CAYNNNNRTG 1 cut(s) 699
Msp20I TGGCCA 2 cut(s) 455, 1556
MspR9I CCNGG 1 cut(s) 217
Mva1269I GAATGC 1 cut(s) 1568
MvaI CCWGG 1 cut(s) 217
MwoI GCNNNNNNNGC 3 cut(s) 175, 1172, 1680
NcoI CCATGG 2 cut(s) 684, 1011
NdeII GATC 4 cut(s) 343, 730, 879, 1755
NlaIV GGNNCC 1 cut(s) 345
NmuCI GTSAC 2 cut(s) 637, 1316
NsiI ATGCAT 1 cut(s) 1536
NspI RCATGY 2 cut(s) 698, 1427
PceI AGGCCT 1 cut(s) 544
PciI ACATGT 2 cut(s) 694, 1423
PctI GAATGC 1 cut(s) 1568
PfeI GAWTC 4 cut(s) 212, 286, 473, 584
PflMI CCANNNNNTGG 2 cut(s) 718, 1012
PkrI GCNGC 4 cut(s) 439, 566, 1225, 1349
PleI GAGTC 2 cut(s) 832, 1460
PpsI GAGTC 2 cut(s) 832, 1460
PscI ACATGT 2 cut(s) 694, 1423
PsiI TTATAA 2 cut(s) 336, 887
Psp6I CCWGG 1 cut(s) 215
PspFI CCCAGC 2 cut(s) 802, 938
PspGI CCWGG 1 cut(s) 215
PspN4I GGNNCC 1 cut(s) 345
PstI CTGCAG 1 cut(s) 226
PsuI RGATCY 3 cut(s) 343, 879, 1755
RseI CAYNNNNRTG 1 cut(s) 699
SaqAI TTAA 4 cut(s) 443, 1290, 1482, 1789
SatI GCNGC 4 cut(s) 438, 565, 1224, 1348
Sau3AI GATC 4 cut(s) 343, 730, 879, 1755
SchI GAGTC 2 cut(s) 833, 1461
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 3 cut(s) 706, 1189, 1462
SfaNI GCATC 3 cut(s) 165, 1048, 1521
SfcI CTRYAG 2 cut(s) 222, 1575
SmiMI CAYNNNNRTG 1 cut(s) 699
SmlI CTYRAG 1 cut(s) 1235
SmoI CTYRAG 1 cut(s) 1235
Sse9I AATT 9 cut(s) 119, 327, 482, 568, 812, 933, 964, 1029, 1665
SseBI AGGCCT 1 cut(s) 544
SsiI CCGC 1 cut(s) 794
SspI AATATT 1 cut(s) 778
SspMI CTAG 2 cut(s) 1140, 1473
StuI AGGCCT 1 cut(s) 544
StyD4I CCNGG 1 cut(s) 215
StyI CCWWGG 4 cut(s) 26, 157, 684, 1011
TaaI ACNGT 1 cut(s) 1316
TaiI ACGT 1 cut(s) 410
TaqI TCGA 4 cut(s) 560, 1228, 1546, 1628
TasI AATT 9 cut(s) 119, 327, 482, 568, 812, 933, 964, 1029, 1665
TfiI GAWTC 4 cut(s) 212, 286, 473, 584
Tru1I TTAA 4 cut(s) 443, 1290, 1482, 1789
Tru9I TTAA 4 cut(s) 443, 1290, 1482, 1789
TscAI CASTG 5 cut(s) 50, 321, 646, 795, 1321
TseFI GTSAC 2 cut(s) 637, 1316
TseI GCWGC 4 cut(s) 437, 564, 1223, 1347
Tsp45I GTSAC 2 cut(s) 637, 1316
TspDTI ATGAA 6 cut(s) 132, 136, 288, 617, 1022, 1134
TspGWI ACGGA 1 cut(s) 1364
TspRI CASTG 5 cut(s) 50, 321, 646, 795, 1321
Van91I CCANNNNNTGG 2 cut(s) 718, 1012
VneI GTGCAC 1 cut(s) 702
XagI CCTNNNNNAGG 1 cut(s) 1262
XapI RAATTY 3 cut(s) 482, 933, 1029
XceI RCATGY 2 cut(s) 698, 1427
XmiI GTMKAC 1 cut(s) 1106
XspI CTAG 2 cut(s) 1140, 1473
Zsp2I ATGCAT 1 cut(s) 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.