RchiOBHm_Chr5g0069731

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000085
Physical Location & Seq
Forward (+)
75553455 .. 75555886
2432 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34510

Sequence Viewer

Length: 1761 bp
ATGCATGATGTCATTGGAGATATGGCCATGTCAATTGCATTATCTGAAGATGGCTATGGGTTTTTGGTAAAAACTCGTTGTGAATTGAAAGAATGGCCAATGGATGCACATGAGGGATACTCGGCAATCTCATTAATGGAGAACAACATTTCCAAGCTGCCTAATGAGTTGGTATGTTCAAAACTCCAAATTTTATTGCTACAGAGAAACATTGGTTTGAAAAATATCCCAGACACTTTTTTTCAGAGTCCCAAGGAATTAAAAGTCTTAGATCTTAGCCGCACCAATATTTTGTTAAGATCCCCATCATTCAATCTCATAACCAACCTCCAAGCTCTGTACTTAGATTATTGCGAGTCAATGATTGACATATCCATGCTTAAAAGCCTGAAAAAACTTGAGATTCTTAGTATAAGAGGATGTGATATTAAGGAATTTCCAAGAGAAATAGGACAACTGACCAATTTGAGGATGTTGGACCTCACTAATATTGGAGACATTGATACAGTTCCATCTCAAGTGATTTCGAGGTTGCACAGATTAGAAGAACTGTACATGAAGTGTAAATTTGGGGATTGGGGCAGTAAAGTTGAGGGAGGCTTATATTCTTTCTTTTTTGGTAAAAATGCTGGCTTTGAAGAGTTAACTGACTTGTCGCATCTAAACATTTTGGAGGTGTCCATATTTGGTCCAGAGTGCTTGCCTAAAACTGTTGAGTTCGATCCAAATTGGGTAAGCTTCGATATATGTATCAACAAAAACTCGTTTAGGGGAATATCCTCTCTGCGACGTGACCATTCACATCATCATTCAAGAACTCTGAGCCTTGACACAACCATCAATACATTACCGGATTGGTTTATCAACGTAGTGACAAAGAAAGCAGAGACGTTATTTTATTTTGAGTGCAAGGGCTTAAATAGCATTGTTGTAGAACATGACCATGGAAGACTACACAGACTAAAGCGGCTCGCTGTACATTCCAATGACAACTTGAAAGAGTTGTTGAACCTAACTACACGGGTCTCAAATGAACCTGTGTTTGAGAATTTGGAAGAATTGCATCTCAAGGACATGGGTTGCCTGGAGAAGTTATGTGTTGGTGAATTACCACTTGGGTCTCTACGGAAGCTGAAGGTATTGGACATCAGACAGTGTCGTGACTTGGTCGATGAACTTTTACCATCAAATTTACTGCGAATAGTGCAAAATATGGAACAAATAATTTGTCATGATTTGAGGCAAATGAAATATGTGTTTGGATTTGAAGGGCTGAAGCCAGAACAGATTATCTTGACGAAATTGAGAAAGATGAGATTGTACAATCAACATAAGGTGTTACGCATATGGAAAGGTCCTGCTCCACATGCAGTCTTCCATAATCTTCGAAGTTTGACAGTTGAATACTACACTAAACTGAAATACCTCTTCACATCCAATGTTGCTCAATGTCTTTTGCATTTGGAAGACCTGTGGCTGCAAGGTTGCAGTAGCTTGGACAGAATTATTGAAACAAGTGATGTGGAAATGATCGTCTTTCCAGAATTGAAGAACTTTATTTTGAAACATCTTCCACAGCTGAAAAGTTTTTGCAGTCCTATTTCAGTAGATATTGAATTCCCTTCGTTGGAACACTTGTATGTGCGTGACTGCCCCCAGTTGATAATCTGTGCTTTTGACTTCAAAAGCAGGAACCATGTAAAACTGAATGATGAACAACATATGTCGTCTCTGTGCAGAAGGTTGTGGGATTTAGAATGA

Protein Analysis

586

Amino Acids

67.89

Weight (kDa)

6.44

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 61 - 118 1.6e-06 Leucine rich repeat
LRR_14 PF23598 102 - 187 1.1e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 350 - 496 2.8e-23 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 280, 967
AclWI GGATC 2 cut(s) 294, 716
AcoI YGGCCR 2 cut(s) 24, 95
AcsI RAATTY 6 cut(s) 189, 434, 566, 1048, 1189, 1616
AcuI CTGAAG 3 cut(s) 66, 1154, 1295
AfaI GTAC 4 cut(s) 341, 554, 978, 1322
AfiI CCNNNNNNNGG 2 cut(s) 468, 1627
AjiI CACGTC 1 cut(s) 791
AjnI CCWGG 1 cut(s) 1083
AjuI GAANNNNNNNTTGG 2 cut(s) 1098, 1130
AloI GAACNNNNNNTCC 2 cut(s) 134, 166
AluBI AGCT 6 cut(s) 157, 335, 738, 1132, 1494, 1579
AluI AGCT 6 cut(s) 157, 335, 738, 1132, 1494, 1579
Alw26I GTCTC 5 cut(s) 489, 881, 1030, 1125, 1734
AlwI GGATC 2 cut(s) 294, 716
AoxI GGCC 2 cut(s) 24, 95
ApeKI GCWGC 2 cut(s) 157, 1477
ApoI RAATTY 6 cut(s) 189, 434, 566, 1048, 1189, 1616
ArsI GACNNNNNNTTYG 2 cut(s) 1213, 1245
AseI ATTAAT 1 cut(s) 134
AspS9I GGNCC 3 cut(s) 478, 689, 1355
AsuHPI GGTGA 1 cut(s) 1115
AsuII TTCGAA 1 cut(s) 1387
AvaII GGWCC 3 cut(s) 478, 689, 1355
BalI TGGCCA 2 cut(s) 26, 97
BbsI GAAGAC 3 cut(s) 955, 1366, 1473
BbvI GCAGC 2 cut(s) 144, 1464
BccI CCATC 5 cut(s) 44, 313, 520, 845, 1192
BciT130I CCWGG 1 cut(s) 1085
BciVI GTATCC 1 cut(s) 110
BcoDI GTCTC 5 cut(s) 489, 881, 1030, 1125, 1734
BfmI CTRYAG 1 cut(s) 200
BfuI GTATCC 1 cut(s) 110
BglII AGATCT 1 cut(s) 271
BisI GCNGC 4 cut(s) 158, 280, 968, 1478
BlsI GCNGC 4 cut(s) 159, 281, 969, 1479
Bme1390I CCNGG 1 cut(s) 1085
Bme18I GGWCC 3 cut(s) 478, 689, 1355
BmgBI CACGTC 1 cut(s) 791
BmgT120I GGNCC 3 cut(s) 478, 689, 1355
BmiI GGNNCC 1 cut(s) 1694
BmrFI CCNGG 1 cut(s) 1085
BmrI ACTGGG 1 cut(s) 1651
BmsI GCATC 3 cut(s) 94, 667, 1072
BmuI ACTGGG 1 cut(s) 1651
BpiI GAAGAC 3 cut(s) 955, 1366, 1473
BplI GAGNNNNNCTC 2 cut(s) 104, 136
BpmI CTGGAG 1 cut(s) 1106
Bpu14I TTCGAA 1 cut(s) 1387
BpuEI CTTGAG 3 cut(s) 419, 501, 1052
BsaBI GATNNNNATC 1 cut(s) 304
BsaI GGTCTC 2 cut(s) 1030, 1125
BsaJI CCNNGG 2 cut(s) 252, 943
BsaWI WCCGGW 1 cut(s) 850
Bsc4I CCNNNNNNNGG 2 cut(s) 468, 1627
Bse1I ACTGG 1 cut(s) 1657
Bse8I GATNNNNATC 1 cut(s) 304
BseBI CCWGG 1 cut(s) 1085
BseDI CCNNGG 2 cut(s) 252, 943
BseGI GGATG 4 cut(s) 109, 425, 477, 1433
BseJI GATNNNNATC 1 cut(s) 304
BseLI CCNNNNNNNGG 2 cut(s) 468, 1627
BseMII CTCAG 1 cut(s) 812
BseNI ACTGG 1 cut(s) 1657
BseXI GCAGC 2 cut(s) 144, 1464
BsgI GTGCAG 1 cut(s) 1756
BshFI GGCC 2 cut(s) 26, 97
BsiSI CCGG 1 cut(s) 851
BslFI GGGAC 1 cut(s) 234
BslI CCNNNNNNNGG 2 cut(s) 468, 1627
BsmAI GTCTC 5 cut(s) 489, 881, 1030, 1125, 1734
BsmBI CGTCTC 2 cut(s) 881, 1734
BsmFI GGGAC 1 cut(s) 234
BsnI GGCC 2 cut(s) 26, 97
Bso31I GGTCTC 2 cut(s) 1030, 1125
Bsp119I TTCGAA 1 cut(s) 1387
Bsp1407I TGTACA 3 cut(s) 552, 976, 1320
Bsp143I GATC 4 cut(s) 271, 299, 721, 1530
Bsp19I CCATGG 1 cut(s) 943
BspACI CCGC 2 cut(s) 280, 967
BspANI GGCC 2 cut(s) 26, 97
BspCNI CTCAG 1 cut(s) 813
BspHI TCATGA 1 cut(s) 1231
BspLI GGNNCC 1 cut(s) 1694
BspPI GGATC 2 cut(s) 294, 716
BspT104I TTCGAA 1 cut(s) 1387
BspTNI GGTCTC 2 cut(s) 1030, 1125
BsrGI TGTACA 3 cut(s) 552, 976, 1320
BsrI ACTGG 1 cut(s) 1657
BssECI CCNNGG 2 cut(s) 252, 943
BssMI GATC 4 cut(s) 271, 299, 721, 1530
BssT1I CCWWGG 2 cut(s) 252, 943
Bst2UI CCWGG 1 cut(s) 1085
Bst4CI ACNGT 5 cut(s) 508, 552, 712, 1155, 1399
Bst6I CTCTTC 2 cut(s) 633, 1433
BstAUI TGTACA 3 cut(s) 552, 976, 1320
BstBI TTCGAA 1 cut(s) 1387
BstC8I GCNNGC 3 cut(s) 631, 701, 972
BstDEI CTNAG 5 cut(s) 268, 275, 343, 407, 821
BstDSI CCRYGG 1 cut(s) 943
BstF5I GGATG 4 cut(s) 109, 425, 477, 1433
BstKTI GATC 4 cut(s) 274, 302, 724, 1533
BstMAI GTCTC 5 cut(s) 489, 881, 1030, 1125, 1734
BstMBI GATC 4 cut(s) 271, 299, 721, 1530
BstMWI GCNNNNNNNGC 3 cut(s) 921, 1204, 1367
BstNI CCWGG 1 cut(s) 1085
BstNSI RCATGY 1 cut(s) 1370
BstSCI CCNGG 1 cut(s) 1083
BstSFI CTRYAG 1 cut(s) 200
BstV1I GCAGC 2 cut(s) 144, 1464
BstV2I GAAGAC 3 cut(s) 955, 1366, 1473
BstX2I RGATCY 2 cut(s) 271, 299
BstYI RGATCY 2 cut(s) 271, 299
BsuI GTATCC 1 cut(s) 110
BsuRI GGCC 2 cut(s) 26, 97
BtgI CCRYGG 1 cut(s) 943
BtrI CACGTC 1 cut(s) 791
BtsCI GGATG 4 cut(s) 109, 425, 477, 1433
BtsIMutI CAGTG 1 cut(s) 1160
Cac8I GCNNGC 3 cut(s) 631, 701, 972
CciI TCATGA 1 cut(s) 1231
Cfr13I GGNCC 3 cut(s) 478, 689, 1355
Csp6I GTAC 4 cut(s) 340, 553, 977, 1321
CspCI CAANNNNNGTGG 2 cut(s) 1503, 1538
CviQI GTAC 4 cut(s) 340, 553, 977, 1321
DdeI CTNAG 5 cut(s) 268, 275, 343, 407, 821
DpnI GATC 4 cut(s) 273, 301, 723, 1532
DpnII GATC 4 cut(s) 271, 299, 721, 1530
EaeI YGGCCR 2 cut(s) 24, 95
Eam1104I CTCTTC 2 cut(s) 633, 1433
EarI CTCTTC 2 cut(s) 633, 1433
Eco130I CCWWGG 2 cut(s) 252, 943
Eco31I GGTCTC 2 cut(s) 1030, 1125
Eco47I GGWCC 3 cut(s) 478, 689, 1355
Eco57I CTGAAG 3 cut(s) 66, 1154, 1295
EcoO109I RGGNCCY 1 cut(s) 1355
EcoRI GAATTC 1 cut(s) 1616
EcoRII CCWGG 1 cut(s) 1083
EcoT14I CCWWGG 2 cut(s) 252, 943
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 252, 943
Esp3I CGTCTC 2 cut(s) 881, 1734
FaqI GGGAC 1 cut(s) 234
FauNDI CATATG 2 cut(s) 1346, 1722
Fnu4HI GCNGC 4 cut(s) 158, 280, 968, 1478
FokI GGATG 4 cut(s) 116, 432, 484, 1420
Fsp4HI GCNGC 4 cut(s) 158, 280, 968, 1478
GluI GCNGC 4 cut(s) 158, 280, 968, 1478
GsuI CTGGAG 1 cut(s) 1106
HaeIII GGCC 2 cut(s) 26, 97
HapII CCGG 1 cut(s) 851
HincII GTYRAC 1 cut(s) 645
HindII GTYRAC 1 cut(s) 645
HindIII AAGCTT 1 cut(s) 736
HinfI GANTC 3 cut(s) 247, 356, 403
HpaI GTTAAC 1 cut(s) 645
HpaII CCGG 1 cut(s) 851
HphI GGTGA 1 cut(s) 1115
Hpy166II GTNNAC 1 cut(s) 645
Hpy188I TCNGA 4 cut(s) 46, 246, 822, 1151
Hpy188III TCNNGA 6 cut(s) 692, 813, 1160, 1232, 1294, 1541
Hpy8I GTNNAC 1 cut(s) 645
Hpy99I CGWCG 1 cut(s) 792
HpyAV CCTTC 4 cut(s) 1129, 1262, 1632, 1734
HpyCH4III ACNGT 5 cut(s) 508, 552, 712, 1155, 1399
HpyCH4IV ACGT 3 cut(s) 790, 867, 890
HpyF10VI GCNNNNNNNGC 3 cut(s) 921, 1204, 1367
HpyF3I CTNAG 5 cut(s) 268, 275, 343, 407, 821
HpySE526I ACGT 3 cut(s) 790, 867, 890
KspAI GTTAAC 1 cut(s) 645
Kzo9I GATC 4 cut(s) 271, 299, 721, 1530
LmnI GCTCC 1 cut(s) 1366
Lsp1109I GCAGC 2 cut(s) 144, 1464
LweI GCATC 3 cut(s) 94, 667, 1072
MaeII ACGT 3 cut(s) 790, 867, 890
MaeIII GTNAC 5 cut(s) 791, 871, 1160, 1338, 1646
MalI GATC 4 cut(s) 273, 301, 723, 1532
MboI GATC 4 cut(s) 271, 299, 721, 1530
MfeI CAATTG 1 cut(s) 33
MflI RGATCY 2 cut(s) 271, 299
MlsI TGGCCA 2 cut(s) 26, 97
MluNI TGGCCA 2 cut(s) 26, 97
MlyI GAGTC 2 cut(s) 256, 365
MmeI TCCRAC 2 cut(s) 456, 1608
Mox20I TGGCCA 2 cut(s) 26, 97
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 2 cut(s) 26, 97
MseI TTAA 7 cut(s) 134, 260, 296, 381, 429, 644, 917
MslI CAYNNNNRTG 4 cut(s) 374, 942, 984, 1638
Msp20I TGGCCA 2 cut(s) 26, 97
MspA1I CMGCKG 1 cut(s) 1579
MspI CCGG 1 cut(s) 851
MspR9I CCNGG 1 cut(s) 1085
MunI CAATTG 1 cut(s) 33
MvaI CCWGG 1 cut(s) 1085
MwoI GCNNNNNNNGC 3 cut(s) 921, 1204, 1367
NcoI CCATGG 1 cut(s) 943
NdeI CATATG 2 cut(s) 1346, 1722
NdeII GATC 4 cut(s) 271, 299, 721, 1530
NlaIV GGNNCC 1 cut(s) 1694
NmeAIII GCCGAG 1 cut(s) 101
NmuCI GTSAC 4 cut(s) 791, 871, 1160, 1646
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1370
NspV TTCGAA 1 cut(s) 1387
PagI TCATGA 1 cut(s) 1231
PfeI GAWTC 1 cut(s) 403
PflFI GACNNNGTC 2 cut(s) 1155, 1166
PkrI GCNGC 4 cut(s) 159, 281, 969, 1479
PleI GAGTC 2 cut(s) 255, 364
PpsI GAGTC 2 cut(s) 255, 364
PpuMI RGGWCCY 1 cut(s) 1355
PshBI ATTAAT 1 cut(s) 134
Psp5II RGGWCCY 1 cut(s) 1355
Psp6I CCWGG 1 cut(s) 1083
PspGI CCWGG 1 cut(s) 1083
PspN4I GGNNCC 1 cut(s) 1694
PspPI GGNCC 3 cut(s) 478, 689, 1355
PspPPI RGGWCCY 1 cut(s) 1355
PsuI RGATCY 2 cut(s) 271, 299
PsyI GACNNNGTC 2 cut(s) 1155, 1166
PvuII CAGCTG 1 cut(s) 1579
RsaI GTAC 4 cut(s) 341, 554, 978, 1322
RsaNI GTAC 4 cut(s) 340, 553, 977, 1321
RseI CAYNNNNRTG 4 cut(s) 374, 942, 984, 1638
SaqAI TTAA 7 cut(s) 134, 260, 296, 381, 429, 644, 917
SatI GCNGC 4 cut(s) 158, 280, 968, 1478
Sau3AI GATC 4 cut(s) 271, 299, 721, 1530
Sau96I GGNCC 3 cut(s) 478, 689, 1355
SchI GAGTC 2 cut(s) 256, 365
ScrFI CCNGG 1 cut(s) 1085
SfaNI GCATC 3 cut(s) 94, 667, 1072
SfcI CTRYAG 1 cut(s) 200
SfuI TTCGAA 1 cut(s) 1387
SinI GGWCC 3 cut(s) 478, 689, 1355
SmiMI CAYNNNNRTG 4 cut(s) 374, 942, 984, 1638
SmlI CTYRAG 3 cut(s) 398, 516, 1067
SmoI CTYRAG 3 cut(s) 398, 516, 1067
SsiI CCGC 2 cut(s) 280, 967
SspI AATATT 2 cut(s) 289, 490
StyD4I CCNGG 1 cut(s) 1083
StyI CCWWGG 2 cut(s) 252, 943
TaaI ACNGT 5 cut(s) 508, 552, 712, 1155, 1399
TaiI ACGT 3 cut(s) 793, 870, 893
TaqI TCGA 5 cut(s) 527, 720, 741, 1170, 1387
TatI WGTACW 4 cut(s) 339, 552, 976, 1320
TauI GCSGC 2 cut(s) 282, 970
TfiI GAWTC 1 cut(s) 403
Tru1I TTAA 7 cut(s) 134, 260, 296, 381, 429, 644, 917
Tru9I TTAA 7 cut(s) 134, 260, 296, 381, 429, 644, 917
TscAI CASTG 1 cut(s) 1160
TseFI GTSAC 4 cut(s) 791, 871, 1160, 1646
TseI GCWGC 2 cut(s) 157, 1477
Tsp45I GTSAC 4 cut(s) 791, 871, 1160, 1646
TspDTI ATGAA 5 cut(s) 572, 1047, 1188, 1262, 1728
TspGWI ACGGA 1 cut(s) 1141
TspRI CASTG 1 cut(s) 1160
Tth111I GACNNNGTC 2 cut(s) 1155, 1166
VpaK11BI GGWCC 3 cut(s) 478, 689, 1355
VspI ATTAAT 1 cut(s) 134
XapI RAATTY 6 cut(s) 189, 434, 566, 1048, 1189, 1616
XceI RCATGY 1 cut(s) 1370
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.