Rh7CG362800

Callose synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
45026784 .. 45032052
5269 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG362800.1

Sequence Viewer

Length: 996 bp
ATGGGAGCCACGTTACTGGCACTGATGCAAACGTTCAATCTGCACGGCTTACTAATTGGGAAGTTCAGGAAATCCTGCAAGTTGCCGATGAAATCCGACATAACGATCCCATCATCAGTAGAATCTATAAAGCAAGCAAGGAGGGGGGATGATACTGTGGATAGAAACCAAGACTTTCTTGCCTTACAGAAGTTCTATAAACTTTATAGAGAGAAGAATAATGTAGAAAAGCTGCGGGAGGAAGAAATGAAGTTGAGGGAATCTGGATCTGTCTGTGGAAACCTGGGGGAGTTGGAGAGAAAAACAAGTACAAGGAAAAGAGTTTCTGCAATTCTAAGAATTCTGGAGACAGTTTTGGAGCAGCTGGAGGAAACTCCTGAAGAGAAAACATCTCGAGTTGAGGAGCATGGGACTTACGATATTGGAAAAACATCTCGAGTTGAGGAGCATGGGACTTGCAATATTGGAAAAACATCTCGAGTTGAGGAGCATGGGACTTGCGATATTGGAAAAACATCTCGAGTTGAGGAGCGATGGGAGAGTATAGTCTGTGCAGTACTAAAACGGGAAAGGATGGGAACTGATGCATACAGGCGGCATGGTACAGGCATTGTTGGAAAAGTTCGATCTTCATTTGCAATTAGCAGGGTTATAAATAAAATTTTGGAAGCTGCAGATGAAATCGGAGATGAAAATCTTATTGCCTCTAGAATCTTATGTGAGCAGGGTTATTCATTGGCTCAAGATCTGGATTCTGATAGTGAAGGAAAGGGAGTATTACAGTTTAAGGCTGGTCTGATGTGTGTCATTAAGGTATATCTTTCATATTTAATAGGTGAAGTATCTCTCAATCACTCTGGGTTCTTACATTTTGCATACAATGACATGTTTTGCATGCAAATATGGGCTTCTGCAGGTATTATCATTTGGATCTGTTATGTAATTCCACTCATAATGGATCAATATGTGAGATATCTTTTATGCAGCCATGTATAA

Protein Analysis

331

Amino Acids

37.52

Weight (kDa)

7.07

Isoelectric Point (pI)

36.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 653
Acc36I ACCTGC 1 cut(s) 905
AciI CCGC 2 cut(s) 235, 595
AclI AACGTT 1 cut(s) 32
AclWI GGATC 4 cut(s) 100, 274, 938, 966
AcsI RAATTY 2 cut(s) 339, 660
AcuI CTGAAG 1 cut(s) 399
AfaI GTAC 3 cut(s) 310, 558, 604
AflIII ACRYGT 1 cut(s) 885
AgsI TTSAA 1 cut(s) 37
AjnI CCWGG 1 cut(s) 282
AluBI AGCT 3 cut(s) 232, 364, 671
AluI AGCT 3 cut(s) 232, 364, 671
Alw26I GTCTC 1 cut(s) 341
AlwI GGATC 4 cut(s) 100, 274, 938, 966
Ama87I CYCGRG 4 cut(s) 393, 435, 477, 519
ApeKI GCWGC 4 cut(s) 232, 361, 671, 984
ApoI RAATTY 2 cut(s) 339, 660
AsuHPI GGTGA 1 cut(s) 848
AvaI CYCGRG 4 cut(s) 393, 435, 477, 519
BbvI GCAGC 3 cut(s) 219, 373, 658
BccI CCATC 3 cut(s) 118, 528, 568
BceAI ACGGC 1 cut(s) 61
BciT130I CCWGG 1 cut(s) 284
BcoDI GTCTC 1 cut(s) 341
BfaI CTAG 1 cut(s) 708
BfmI CTRYAG 2 cut(s) 672, 912
BfuAI ACCTGC 1 cut(s) 905
BglII AGATCT 1 cut(s) 745
BisI GCNGC 5 cut(s) 233, 362, 596, 672, 985
BlsI GCNGC 5 cut(s) 234, 363, 597, 673, 986
BmcAI AGTACT 1 cut(s) 558
Bme1390I CCNGG 1 cut(s) 284
BmeT110I CYCGRG 4 cut(s) 393, 435, 477, 519
BmiI GGNNCC 1 cut(s) 7
BmrFI CCNGG 1 cut(s) 284
BmsI GCATC 2 cut(s) 15, 574
BpmI CTGGAG 2 cut(s) 365, 386
BpuEI CTTGAG 1 cut(s) 726
BsaBI GATNNNNATC 1 cut(s) 693
BsaJI CCNNGG 1 cut(s) 283
Bse1I ACTGG 1 cut(s) 21
Bse8I GATNNNNATC 1 cut(s) 693
BseBI CCWGG 1 cut(s) 284
BseDI CCNNGG 1 cut(s) 283
BseGI GGATG 2 cut(s) 154, 579
BseJI GATNNNNATC 1 cut(s) 693
BseNI ACTGG 1 cut(s) 21
BseRI GAGGAG 4 cut(s) 416, 458, 500, 542
BseXI GCAGC 3 cut(s) 219, 373, 658
BsgI GTGCAG 2 cut(s) 26, 573
BsiHKCI CYCGRG 4 cut(s) 393, 435, 477, 519
BslFI GGGAC 3 cut(s) 424, 466, 508
BsmAI GTCTC 1 cut(s) 341
BsmFI GGGAC 3 cut(s) 424, 466, 508
BsoBI CYCGRG 4 cut(s) 393, 435, 477, 519
Bsp143I GATC 6 cut(s) 105, 266, 626, 745, 930, 958
BspACI CCGC 2 cut(s) 235, 595
BspLI GGNNCC 1 cut(s) 7
BspMAI CTGCAG 2 cut(s) 676, 916
BspMI ACCTGC 1 cut(s) 905
BspPI GGATC 4 cut(s) 100, 274, 938, 966
BsrI ACTGG 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 283
BssMI GATC 6 cut(s) 105, 266, 626, 745, 930, 958
Bst2UI CCWGG 1 cut(s) 284
Bst4CI ACNGT 3 cut(s) 157, 352, 783
Bst6I CTCTTC 1 cut(s) 375
BstC8I GCNNGC 2 cut(s) 135, 896
BstDEI CTNAG 1 cut(s) 335
BstF5I GGATG 2 cut(s) 154, 579
BstKTI GATC 6 cut(s) 108, 269, 629, 748, 933, 961
BstMAI GTCTC 1 cut(s) 341
BstMBI GATC 6 cut(s) 105, 266, 626, 745, 930, 958
BstNI CCWGG 1 cut(s) 284
BstNSI RCATGY 2 cut(s) 889, 898
BstSCI CCNGG 1 cut(s) 282
BstSFI CTRYAG 2 cut(s) 672, 912
BstV1I GCAGC 3 cut(s) 219, 373, 658
BstX2I RGATCY 3 cut(s) 266, 745, 930
BstXI CCANNNNNNTGG 1 cut(s) 16
BstYI RGATCY 3 cut(s) 266, 745, 930
BtgZI GCGATG 1 cut(s) 547
BtsCI GGATG 2 cut(s) 154, 579
BtsIMutI CAGTG 1 cut(s) 20
BveI ACCTGC 1 cut(s) 905
Cac8I GCNNGC 2 cut(s) 135, 896
Csp6I GTAC 3 cut(s) 309, 557, 603
CviAII CATG 7 cut(s) 407, 449, 491, 599, 886, 895, 989
CviJI RGCY 9 cut(s) 8, 48, 232, 364, 671, 740, 791, 908, 987
CviKI_1 RGCY 9 cut(s) 8, 48, 232, 364, 671, 740, 791, 908, 987
CviQI GTAC 3 cut(s) 309, 557, 603
DdeI CTNAG 1 cut(s) 335
DpnI GATC 6 cut(s) 107, 268, 628, 747, 932, 960
DpnII GATC 6 cut(s) 105, 266, 626, 745, 930, 958
Eam1104I CTCTTC 1 cut(s) 375
EarI CTCTTC 1 cut(s) 375
Eco32I GATATC 1 cut(s) 974
Eco57I CTGAAG 1 cut(s) 399
Eco88I CYCGRG 4 cut(s) 393, 435, 477, 519
EcoRI GAATTC 1 cut(s) 339
EcoRII CCWGG 1 cut(s) 282
EcoRV GATATC 1 cut(s) 974
EcoT22I ATGCAT 1 cut(s) 589
FaeI CATG 7 cut(s) 410, 452, 494, 602, 889, 898, 992
FalI AAGNNNNNCTT 2 cut(s) 162, 194
FaqI GGGAC 3 cut(s) 424, 466, 508
FatI CATG 7 cut(s) 406, 448, 490, 598, 885, 894, 988
FauI CCCGC 1 cut(s) 228
Fnu4HI GCNGC 5 cut(s) 233, 362, 596, 672, 985
FokI GGATG 2 cut(s) 161, 586
Fsp4HI GCNGC 5 cut(s) 233, 362, 596, 672, 985
FspBI CTAG 1 cut(s) 708
GluI GCNGC 5 cut(s) 233, 362, 596, 672, 985
GsuI CTGGAG 2 cut(s) 365, 386
Hin1II CATG 7 cut(s) 410, 452, 494, 602, 889, 898, 992
HinfI GANTC 4 cut(s) 122, 260, 711, 752
HphI GGTGA 1 cut(s) 848
Hpy188I TCNGA 4 cut(s) 97, 686, 757, 798
HpyAV CCTTC 1 cut(s) 758
HpyCH4III ACNGT 3 cut(s) 157, 352, 783
HpyCH4IV ACGT 2 cut(s) 11, 32
HpyF3I CTNAG 1 cut(s) 335
HpySE526I ACGT 2 cut(s) 11, 32
Hsp92II CATG 7 cut(s) 410, 452, 494, 602, 889, 898, 992
Kzo9I GATC 6 cut(s) 105, 266, 626, 745, 930, 958
LmnI GCTCC 6 cut(s) 5, 358, 403, 445, 487, 529
Lsp1109I GCAGC 3 cut(s) 219, 373, 658
LweI GCATC 2 cut(s) 15, 574
MaeI CTAG 1 cut(s) 708
MaeII ACGT 2 cut(s) 11, 32
MaeIII GTNAC 1 cut(s) 12
MalI GATC 6 cut(s) 107, 268, 628, 747, 932, 960
MboI GATC 6 cut(s) 105, 266, 626, 745, 930, 958
MboII GAAGA 4 cut(s) 226, 254, 392, 621
MflI RGATCY 3 cut(s) 266, 745, 930
MluCI AATT 6 cut(s) 54, 330, 339, 639, 660, 942
MmeI TCCRAC 3 cut(s) 120, 273, 595
MnlI CCTC 9 cut(s) 135, 232, 249, 361, 394, 436, 478, 520, 715
Mph1103I ATGCAT 1 cut(s) 589
MseI TTAA 3 cut(s) 786, 810, 830
MspA1I CMGCKG 1 cut(s) 364
MspR9I CCNGG 1 cut(s) 284
MvaI CCWGG 1 cut(s) 284
NdeII GATC 6 cut(s) 105, 266, 626, 745, 930, 958
NlaIII CATG 7 cut(s) 410, 452, 494, 602, 889, 898, 992
NlaIV GGNNCC 1 cut(s) 7
NsiI ATGCAT 1 cut(s) 589
NspI RCATGY 2 cut(s) 889, 898
PaeI GCATGC 1 cut(s) 898
PaeR7I CTCGAG 4 cut(s) 393, 435, 477, 519
PciI ACATGT 1 cut(s) 885
PfeI GAWTC 4 cut(s) 122, 260, 711, 752
PkrI GCNGC 5 cut(s) 234, 363, 597, 673, 986
PscI ACATGT 1 cut(s) 885
PsiI TTATAA 1 cut(s) 653
Psp1406I AACGTT 1 cut(s) 32
Psp6I CCWGG 1 cut(s) 282
PspGI CCWGG 1 cut(s) 282
PspN4I GGNNCC 1 cut(s) 7
PstI CTGCAG 2 cut(s) 676, 916
PsuI RGATCY 3 cut(s) 266, 745, 930
PvuII CAGCTG 1 cut(s) 364
RsaI GTAC 3 cut(s) 310, 558, 604
RsaNI GTAC 3 cut(s) 309, 557, 603
SaqAI TTAA 3 cut(s) 786, 810, 830
SatI GCNGC 5 cut(s) 233, 362, 596, 672, 985
Sau3AI GATC 6 cut(s) 105, 266, 626, 745, 930, 958
ScaI AGTACT 1 cut(s) 558
ScrFI CCNGG 1 cut(s) 284
SetI ASST 9 cut(s) 14, 35, 234, 285, 366, 673, 816, 838, 919
SfaNI GCATC 2 cut(s) 15, 574
SfcI CTRYAG 2 cut(s) 672, 912
Sfr274I CTCGAG 4 cut(s) 393, 435, 477, 519
SlaI CTCGAG 4 cut(s) 393, 435, 477, 519
SmlI CTYRAG 5 cut(s) 393, 435, 477, 519, 741
SmoI CTYRAG 5 cut(s) 393, 435, 477, 519, 741
SphI GCATGC 1 cut(s) 898
Sse9I AATT 6 cut(s) 54, 330, 339, 639, 660, 942
SsiI CCGC 2 cut(s) 235, 595
SspI AATATT 1 cut(s) 463
SspMI CTAG 1 cut(s) 708
StyD4I CCNGG 1 cut(s) 282
TaaI ACNGT 3 cut(s) 157, 352, 783
TaiI ACGT 2 cut(s) 14, 35
TaqI TCGA 5 cut(s) 394, 436, 478, 520, 625
TasI AATT 6 cut(s) 54, 330, 339, 639, 660, 942
TatI WGTACW 2 cut(s) 308, 556
TauI GCSGC 1 cut(s) 598
TfiI GAWTC 4 cut(s) 122, 260, 711, 752
Tru1I TTAA 3 cut(s) 786, 810, 830
Tru9I TTAA 3 cut(s) 786, 810, 830
TscAI CASTG 1 cut(s) 27
TseI GCWGC 4 cut(s) 232, 361, 671, 984
TspDTI ATGAA 7 cut(s) 104, 263, 621, 693, 705, 723, 813
TspRI CASTG 1 cut(s) 27
XapI RAATTY 2 cut(s) 339, 660
XbaI TCTAGA 1 cut(s) 707
XceI RCATGY 2 cut(s) 889, 898
XhoI CTCGAG 4 cut(s) 393, 435, 477, 519
XspI CTAG 1 cut(s) 708
ZrmI AGTACT 1 cut(s) 558
Zsp2I ATGCAT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.