Rmu_sc0016164.1_g000015

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016164.1
Physical Location & Seq
Reverse (-)
44913 .. 47528
2616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016164.1_g000015.1.cds

Sequence Viewer

Length: 2616 bp
atgctttctggcagaactgatagagaacttgtggatgccattgaggaatctgtgtgcaataaattacgactgactgaacctgagcttaaaatgtgcatcggaggttttaaagaatttgcagcaacaaaacaagccattgagaaggtcatgaacgcgctaaaagatgatgaggccactaccattggagtctacggaatggggggcgttggaaagacgacaatggtgaaatatgttggagcacaagcccaaaaaagtaggctttttaatcaagtgattatggctgtcgtatcccaaaaccccgacttgatacaaattcaagagacatttgcagaaatgctggactttaaattggaggagaagacagaaattggaagagccattaaattgaaggagaagataatgagaggaaccgggatcctcataatcttggatgacatttggaagagaatagagttttcaagaattggaattccaaaccacaacgaacttctaagatgcaattccaaagtcctattgaccaccagaagatcaagtgtttgtcagatcatggagagccatgcaattggaattgggaaaggaatgtttcaagattccaacatgctagaagcccgcgccacaacatatttagtggtgaaggcccttaaagattctagcttgcttttggacgctagagctgaaggatgtgtaaggatgcatgatgtcattcgggatatggcaatattaatgacgtcattatctgaagacggccagcggttcttggtgaaagttggctttgaattgaagaattggccaaagattgatgcacgtaaaggctactctgcaatctcactaatgcataacaacatttgcaagctacccgaagagttggtatgtccaaatctacagattttattactacagtacagtttgtctctacatgagatcccaaaatcttttttccaaagtcaaaatgaattaagagtcttggatcttagctacacttgtatttcattactaccccaatcaattagtttcctaaccaaccttcaagctttgtatttagattattgtttgaacataattgacatttctgtaatcggaaaacttcacaagcttgagattcttagtatgagaggaaattctctgagagaattgccaagagaaatagggcagttgaccaagctagggatgctggatgtcagtgctgaacgtatccatctatttgcagtgtctaaaagtgcaagtggaacctcgagtagacgtctttgcacaattccatctaaagtgatatcaaagttgcataaattagaagaactatacatgcaatgtggattttgggactgggggagtaaaattgatggaaaaggagaagaaactaatattagctttgatgaattagctggtttatcatatttaagcattttgaaagtttgcatatcagatgcaaattgcatccctaaaagtgttaaggccgtaccaaattgggtttactttgatattagtatttgcagcgacagtgaaagacagagacacaatcattggttcatagaaacctttcctgggagcctacaatctggtcataattgtagatccttgagttttgatagtactgacacaaccataggaacctttccggactggtttgtcaacgttgtggtaaagaatactgagaggctaagttatagagagtgcagagggttgagtaacattcttgtggagtttgaccgtgggaggttacatggactgaaagttctctctgtacaagatcgctgtgagaacttgaaagaattgatgaatgcaataacatgtgttccagatatgcctgtgtttaagaacttggaaaagttgtatctggagaacttggatgacctgaagcagttatgtgttggtgagttaccgtctggatctctctgcagtctgaaattattgagggtacttgactgtcctaacttggggaatgtactgttgccatcaaaattgttgcagaaactaccaaatctggaaaaactactctgtaagagaagtggaatagaatctgtgtttggatgtgaaggatttgagccagaaaaaacaaatctgagagagatggagttgcaagatctatatgaagtaagaagcatatgtaacagtcctgctccacgcggaatgttccagactctaaagaaattggacattcactgtagcaagttccagggaagcctattcacatttgatgtagctcagtgtctttttcaattggaagaccttcatgtatccttctgccgtcacttggaaagagtaattgaaccaaggagggaaacagtgaatagcaagaagaccgttcttccaaaattgaagaacttatgtttgcagtttcttccaatgttgtacgagggaagtgctactattgattttgagtgtccttcattggaaaacttggtagtgtcttcctgcccccacttgtcatttccatcctctgcttctgactacttccacagcaggaaccaagtcattttcagtgaacttcccaaatctagagatccagagtatgtcggcatgtcgctgggccataaactttattcaattttctttgccataaactttattcaattttcttttctcttaatgtctgcttatataattggtaggctagtttga

Protein Analysis

871

Amino Acids

98.56

Weight (kDa)

7.42

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1622
AatII GACGTC 2 cut(s) 731, 1243
AccI GTMKAC 2 cut(s) 189, 1237
AccII CGCG 3 cut(s) 155, 612, 2121
AccIII TCCGGA 1 cut(s) 1612
AciI CCGC 3 cut(s) 610, 751, 2121
AclI AACGTT 1 cut(s) 1629
AclWI GGATC 7 cut(s) 409, 422, 916, 975, 1563, 1891, 2492
AcoI YGGCCR 2 cut(s) 745, 788
AcsI RAATTY 4 cut(s) 113, 312, 468, 1117
AcuI CTGAAG 3 cut(s) 696, 759, 1871
AcyI GRCGYC 2 cut(s) 728, 1240
AfaI GTAC 7 cut(s) 902, 1455, 1588, 1740, 1914, 1941, 2348
AfiI CCNNNNNNNGG 4 cut(s) 1164, 1539, 1931, 2248
AflIII ACRYGT 1 cut(s) 1784
AjnI CCWGG 2 cut(s) 1537, 2169
AjuI GAANNNNNNNTTGG 2 cut(s) 2004, 2036
AloI GAACNNNNNNTCC 2 cut(s) 1713, 1745
Alw21I GWGCWC 1 cut(s) 241
Alw26I GTCTC 3 cut(s) 314, 915, 1501
AlwI GGATC 7 cut(s) 409, 422, 916, 975, 1563, 1891, 2492
Ama87I CYCGRG 1 cut(s) 1231
Aor13HI TCCGGA 1 cut(s) 1612
AoxI GGCC 6 cut(s) 171, 636, 745, 788, 1449, 2524
ApeKI GCWGC 2 cut(s) 119, 1488
ApoI RAATTY 4 cut(s) 113, 312, 468, 1117
AseI ATTAAT 1 cut(s) 722
Asp700I GAANNNNTTC 2 cut(s) 1533, 2223
AspLEI GCGC 2 cut(s) 157, 614
AspS9I GGNCC 2 cut(s) 637, 2524
AsuC2I CCSGG 1 cut(s) 412
AsuHPI GGTGA 4 cut(s) 235, 643, 772, 1880
AvaI CYCGRG 1 cut(s) 1231
BalI TGGCCA 1 cut(s) 790
BamHI GGATCC 1 cut(s) 414
BbsI GAAGAC 5 cut(s) 365, 747, 2226, 2300, 2397
Bbv12I GWGCWC 1 cut(s) 241
BbvI GCAGC 2 cut(s) 131, 1500
BccI CCATC 6 cut(s) 1203, 1264, 1331, 1957, 2059, 2437
BceAI ACGGC 3 cut(s) 760, 1436, 2226
BcgI CGANNNNNNTGC 2 cut(s) 2339, 2373
BciT130I CCWGG 2 cut(s) 1539, 2171
BciVI GTATCC 3 cut(s) 298, 1202, 2242
BcnI CCSGG 1 cut(s) 412
BcoDI GTCTC 3 cut(s) 314, 915, 1501
BfaI CTAG 6 cut(s) 602, 651, 669, 1163, 2493, 2609
BfmI CTRYAG 4 cut(s) 881, 896, 1891, 2158
BfuI GTATCC 3 cut(s) 298, 1202, 2242
BglII AGATCT 1 cut(s) 2077
BisI GCNGC 2 cut(s) 120, 1489
BlsI GCNGC 2 cut(s) 121, 1490
BmcAI AGTACT 1 cut(s) 1588
Bme1390I CCNGG 3 cut(s) 412, 1539, 2171
BmeT110I CYCGRG 1 cut(s) 1231
BmgT120I GGNCC 2 cut(s) 637, 2524
BmiI GGNNCC 6 cut(s) 409, 416, 1228, 1544, 1606, 2462
BmrFI CCNGG 3 cut(s) 412, 1539, 2171
BmrI ACTGGG 1 cut(s) 1330
BmsI GCATC 8 cut(s) 25, 105, 485, 681, 790, 1158, 1411, 1440
BmuI ACTGGG 1 cut(s) 1330
BpiI GAAGAC 5 cut(s) 365, 747, 2226, 2300, 2397
BpmI CTGGAG 1 cut(s) 1853
Bpu10I CCTNAGC 1 cut(s) 81
BpuEI CTTGAG 2 cut(s) 1115, 1594
BpuMI CCSGG 1 cut(s) 412
BsaAI YACGTR 1 cut(s) 806
BsaHI GRCGYC 2 cut(s) 728, 1240
BsaJI CCNNGG 4 cut(s) 1538, 1705, 2170, 2267
BsaWI WCCGGW 1 cut(s) 1612
Bsc4I CCNNNNNNNGG 4 cut(s) 1164, 1539, 1931, 2248
Bse1I ACTGG 2 cut(s) 1325, 1622
Bse3DI GCAATG 1 cut(s) 1310
BseAI TCCGGA 1 cut(s) 1612
BseBI CCWGG 2 cut(s) 1539, 2171
BseDI CCNNGG 4 cut(s) 1538, 1705, 2170, 2267
BseLI CCNNNNNNNGG 4 cut(s) 1164, 1539, 1931, 2248
BseMI GCAATG 1 cut(s) 1310
BseMII CTCAG 5 cut(s) 72, 1115, 1638, 2048, 2213
BseNI ACTGG 2 cut(s) 1325, 1622
BseRI GAGGAG 1 cut(s) 368
BseXI GCAGC 2 cut(s) 131, 1500
BseYI CCCAGC 1 cut(s) 2521
BsgI GTGCAG 1 cut(s) 1690
Bsh1236I CGCG 3 cut(s) 155, 612, 2121
BshFI GGCC 6 cut(s) 173, 638, 747, 790, 1451, 2526
BsiHKAI GWGCWC 1 cut(s) 241
BsiHKCI CYCGRG 1 cut(s) 1231
BsiSI CCGG 2 cut(s) 411, 1613
BslFI GGGAC 1 cut(s) 1331
BslI CCNNNNNNNGG 4 cut(s) 1164, 1539, 1931, 2248
BsmAI GTCTC 3 cut(s) 314, 915, 1501
BsmFI GGGAC 1 cut(s) 1331
BsmI GAATGC 1 cut(s) 1780
BsnI GGCC 6 cut(s) 173, 638, 747, 790, 1451, 2526
BsoBI CYCGRG 1 cut(s) 1231
Bsp1286I GDGCHC 1 cut(s) 241
Bsp13I TCCGGA 1 cut(s) 1612
Bsp1407I TGTACA 1 cut(s) 1738
BspACI CCGC 3 cut(s) 610, 751, 2121
BspANI GGCC 6 cut(s) 173, 638, 747, 790, 1451, 2526
BspCNI CTCAG 5 cut(s) 73, 1116, 1639, 2049, 2212
BspEI TCCGGA 1 cut(s) 1612
BspFNI CGCG 3 cut(s) 155, 612, 2121
BspHI TCATGA 1 cut(s) 147
BspLI GGNNCC 6 cut(s) 409, 416, 1228, 1544, 1606, 2462
BspMAI CTGCAG 1 cut(s) 1895
BspPI GGATC 7 cut(s) 409, 422, 916, 975, 1563, 1891, 2492
BspQI GCTCTTC 1 cut(s) 367
BsrDI GCAATG 1 cut(s) 1310
BsrGI TGTACA 1 cut(s) 1738
BsrI ACTGG 2 cut(s) 1325, 1622
BssECI CCNNGG 4 cut(s) 1538, 1705, 2170, 2267
BssNI GRCGYC 2 cut(s) 728, 1240
BssT1I CCWWGG 1 cut(s) 2267
Bst2UI CCWGG 2 cut(s) 1539, 2171
Bst6I CTCTTC 3 cut(s) 367, 437, 855
BstACI GRCGYC 2 cut(s) 728, 1240
BstAUI TGTACA 1 cut(s) 1738
BstBAI YACGTR 1 cut(s) 806
BstC8I GCNNGC 4 cut(s) 610, 656, 749, 851
BstDEI CTNAG 9 cut(s) 81, 491, 971, 1103, 1124, 1647, 1655, 2057, 2199
BstDSI CCRYGG 1 cut(s) 1705
BstFNI CGCG 3 cut(s) 155, 612, 2121
BstHHI GCGC 2 cut(s) 157, 614
BstMAI GTCTC 3 cut(s) 314, 915, 1501
BstMWI GCNNNNNNNGC 1 cut(s) 1168
BstNI CCWGG 2 cut(s) 1539, 2171
BstNSI RCATGY 4 cut(s) 601, 1303, 1788, 2518
BstSCI CCNGG 3 cut(s) 410, 1537, 2169
BstSFI CTRYAG 4 cut(s) 881, 896, 1891, 2158
BstUI CGCG 3 cut(s) 155, 612, 2121
BstV1I GCAGC 2 cut(s) 131, 1500
BstV2I GAAGAC 5 cut(s) 365, 747, 2226, 2300, 2397
BstX2I RGATCY 7 cut(s) 414, 921, 967, 1568, 1883, 2077, 2497
BstXI CCANNNNNNTGG 1 cut(s) 563
BstYI RGATCY 7 cut(s) 414, 921, 967, 1568, 1883, 2077, 2497
BsuI GTATCC 3 cut(s) 298, 1202, 2242
BsuRI GGCC 6 cut(s) 173, 638, 747, 790, 1451, 2526
BtgI CCRYGG 1 cut(s) 1705
BtsI GCAGTG 1 cut(s) 1212
BtsIMutI CAGTG 7 cut(s) 1186, 1212, 1501, 2155, 2207, 2286, 2482
Cac8I GCNNGC 4 cut(s) 610, 656, 749, 851
CciI TCATGA 1 cut(s) 147
CfoI GCGC 2 cut(s) 157, 614
Cfr13I GGNCC 2 cut(s) 637, 2524
CseI GACGC 1 cut(s) 674
Csp6I GTAC 7 cut(s) 901, 1454, 1587, 1739, 1913, 1940, 2347
CspCI CAANNNNNGTGG 2 cut(s) 163, 198
CviQI GTAC 7 cut(s) 901, 1454, 1587, 1739, 1913, 1940, 2347
DdeI CTNAG 9 cut(s) 81, 491, 971, 1103, 1124, 1647, 1655, 2057, 2199
DraI TTTAAA 2 cut(s) 109, 346
DrdI GACNNNNNNGTC 1 cut(s) 1622
DseDI GACNNNNNNGTC 1 cut(s) 1622
EaeI YGGCCR 2 cut(s) 745, 788
Eam1104I CTCTTC 3 cut(s) 367, 437, 855
EarI CTCTTC 3 cut(s) 367, 437, 855
Eco130I CCWWGG 1 cut(s) 2267
Eco32I GATATC 1 cut(s) 1269
Eco57I CTGAAG 3 cut(s) 696, 759, 1871
Eco88I CYCGRG 1 cut(s) 1231
EcoO109I RGGNCCY 1 cut(s) 637
EcoRI GAATTC 1 cut(s) 468
EcoRII CCWGG 2 cut(s) 1537, 2169
EcoRV GATATC 1 cut(s) 1269
EcoT14I CCWWGG 1 cut(s) 2267
EcoT22I ATGCAT 2 cut(s) 696, 837
ErhI CCWWGG 1 cut(s) 2267
FaqI GGGAC 1 cut(s) 1331
FauI CCCGC 1 cut(s) 617
FauNDI CATATG 1 cut(s) 2099
FblI GTMKAC 2 cut(s) 189, 1237
Fnu4HI GCNGC 2 cut(s) 120, 1489
Fsp4HI GCNGC 2 cut(s) 120, 1489
FspBI CTAG 6 cut(s) 602, 651, 669, 1163, 2493, 2609
GlaI GCGC 2 cut(s) 156, 613
GluI GCNGC 2 cut(s) 120, 1489
GsaI CCCAGC 1 cut(s) 2525
GsuI CTGGAG 1 cut(s) 1853
HaeIII GGCC 6 cut(s) 173, 638, 747, 790, 1451, 2526
HapII CCGG 2 cut(s) 411, 1613
HgaI GACGC 1 cut(s) 674
HhaI GCGC 2 cut(s) 157, 614
Hin1I GRCGYC 2 cut(s) 728, 1240
Hin6I GCGC 2 cut(s) 155, 612
HinP1I GCGC 2 cut(s) 155, 612
HincII GTYRAC 2 cut(s) 1155, 1627
HindII GTYRAC 2 cut(s) 1155, 1627
HindIII AAGCTT 2 cut(s) 1029, 1091
HinfI GANTC 8 cut(s) 47, 186, 590, 647, 960, 1099, 2012, 2134
HpaII CCGG 2 cut(s) 411, 1613
HphI GGTGA 4 cut(s) 235, 643, 772, 1880
Hpy166II GTNNAC 6 cut(s) 190, 1155, 1238, 1468, 1627, 2480
Hpy188I TCNGA 9 cut(s) 101, 543, 739, 1079, 1125, 1420, 1899, 2058, 2443
Hpy8I GTNNAC 6 cut(s) 190, 1155, 1238, 1468, 1627, 2480
HpyAV CCTTC 9 cut(s) 136, 382, 628, 671, 1034, 2024, 2234, 2245, 2391
HpyCH4IV ACGT 5 cut(s) 728, 805, 1189, 1240, 1629
HpyF10VI GCNNNNNNNGC 1 cut(s) 1168
HpyF3I CTNAG 9 cut(s) 81, 491, 971, 1103, 1124, 1647, 1655, 2057, 2199
HpySE526I ACGT 5 cut(s) 728, 805, 1189, 1240, 1629
Hsp92I GRCGYC 2 cut(s) 728, 1240
HspAI GCGC 2 cut(s) 155, 612
Kpn2I TCCGGA 1 cut(s) 1612
LguI GCTCTTC 1 cut(s) 367
LmnI GCTCC 3 cut(s) 236, 1542, 2119
Lsp1109I GCAGC 2 cut(s) 131, 1500
LweI GCATC 8 cut(s) 25, 105, 485, 681, 790, 1158, 1411, 1440
MaeI CTAG 6 cut(s) 602, 651, 669, 1163, 2493, 2609
MaeII ACGT 5 cut(s) 728, 805, 1189, 1240, 1629
MaeIII GTNAC 5 cut(s) 1682, 1713, 1872, 2102, 2243
MfeI CAATTG 2 cut(s) 561, 2213
MflI RGATCY 7 cut(s) 414, 921, 967, 1568, 1883, 2077, 2497
MhlI GDGCHC 1 cut(s) 241
MlsI TGGCCA 1 cut(s) 790
MluNI TGGCCA 1 cut(s) 790
MlyI GAGTC 3 cut(s) 195, 969, 2128
MmeI TCCRAC 3 cut(s) 187, 214, 618
Mox20I TGGCCA 1 cut(s) 790
Mph1103I ATGCAT 2 cut(s) 696, 837
MroI TCCGGA 1 cut(s) 1612
MroXI GAANNNNTTC 2 cut(s) 1533, 2223
MscI TGGCCA 1 cut(s) 790
MslI CAYNNNNRTG 1 cut(s) 1691
Msp20I TGGCCA 1 cut(s) 790
MspA1I CMGCKG 1 cut(s) 751
MspI CCGG 2 cut(s) 411, 1613
MspR9I CCNGG 3 cut(s) 412, 1539, 2171
MunI CAATTG 2 cut(s) 561, 2213
Mva1269I GAATGC 1 cut(s) 1780
MvaI CCWGG 2 cut(s) 1539, 2171
MvnI CGCG 3 cut(s) 155, 612, 2121
MwoI GCNNNNNNNGC 1 cut(s) 1168
NciI CCSGG 1 cut(s) 412
NdeI CATATG 1 cut(s) 2099
NlaIV GGNNCC 6 cut(s) 409, 416, 1228, 1544, 1606, 2462
NmuCI GTSAC 1 cut(s) 2243
NsiI ATGCAT 2 cut(s) 696, 837
NspI RCATGY 4 cut(s) 601, 1303, 1788, 2518
PaeR7I CTCGAG 1 cut(s) 1231
PagI TCATGA 1 cut(s) 147
PciI ACATGT 1 cut(s) 1784
PciSI GCTCTTC 1 cut(s) 367
PctI GAATGC 1 cut(s) 1780
PdmI GAANNNNTTC 2 cut(s) 1533, 2223
PfeI GAWTC 5 cut(s) 47, 590, 647, 1099, 2012
PkrI GCNGC 2 cut(s) 121, 1490
PleI GAGTC 3 cut(s) 194, 968, 2128
PpsI GAGTC 3 cut(s) 194, 968, 2128
Ppu21I YACGTR 1 cut(s) 806
PscI ACATGT 1 cut(s) 1784
PshBI ATTAAT 1 cut(s) 722
Psp1406I AACGTT 1 cut(s) 1629
Psp6I CCWGG 2 cut(s) 1537, 2169
PspFI CCCAGC 1 cut(s) 2521
PspGI CCWGG 2 cut(s) 1537, 2169
PspN4I GGNNCC 6 cut(s) 409, 416, 1228, 1544, 1606, 2462
PspPI GGNCC 2 cut(s) 637, 2524
PspXI VCTCGAGB 1 cut(s) 1231
PstI CTGCAG 1 cut(s) 1895
PsuI RGATCY 7 cut(s) 414, 921, 967, 1568, 1883, 2077, 2497
RsaI GTAC 7 cut(s) 902, 1455, 1588, 1740, 1914, 1941, 2348
RsaNI GTAC 7 cut(s) 901, 1454, 1587, 1739, 1913, 1940, 2347
RseI CAYNNNNRTG 1 cut(s) 1691
SapI GCTCTTC 1 cut(s) 367
SatI GCNGC 2 cut(s) 120, 1489
Sau96I GGNCC 2 cut(s) 637, 2524
ScaI AGTACT 1 cut(s) 1588
SchI GAGTC 3 cut(s) 195, 969, 2128
ScrFI CCNGG 3 cut(s) 412, 1539, 2171
SduI GDGCHC 1 cut(s) 241
SfaNI GCATC 8 cut(s) 25, 105, 485, 681, 790, 1158, 1411, 1440
SfcI CTRYAG 4 cut(s) 881, 896, 1891, 2158
Sfr274I CTCGAG 1 cut(s) 1231
SlaI CTCGAG 1 cut(s) 1231
SmiMI CAYNNNNRTG 1 cut(s) 1691
SmlI CTYRAG 3 cut(s) 1094, 1231, 1573
SmoI CTYRAG 3 cut(s) 1094, 1231, 1573
SsiI CCGC 3 cut(s) 610, 751, 2121
SspI AATATT 2 cut(s) 720, 1360
SspMI CTAG 6 cut(s) 602, 651, 669, 1163, 2493, 2609
StyD4I CCNGG 3 cut(s) 410, 1537, 2169
StyI CCWWGG 1 cut(s) 2267
TaiI ACGT 5 cut(s) 731, 808, 1192, 1243, 1632
TaqI TCGA 1 cut(s) 1232
TatI WGTACW 4 cut(s) 900, 1586, 1738, 1939
TfiI GAWTC 5 cut(s) 47, 590, 647, 1099, 2012
TscAI CASTG 7 cut(s) 1186, 1212, 1501, 2162, 2207, 2286, 2482
TseFI GTSAC 1 cut(s) 2243
TseI GCWGC 2 cut(s) 119, 1488
Tsp45I GTSAC 1 cut(s) 2243
TspDTI ATGAA 9 cut(s) 164, 966, 978, 1386, 1513, 1787, 2100, 2216, 2373
TspGWI ACGGA 1 cut(s) 207
TspRI CASTG 7 cut(s) 1186, 1212, 1501, 2162, 2207, 2286, 2482
VspI ATTAAT 1 cut(s) 722
XapI RAATTY 4 cut(s) 113, 312, 468, 1117
XbaI TCTAGA 1 cut(s) 2492
XceI RCATGY 4 cut(s) 601, 1303, 1788, 2518
XhoI CTCGAG 1 cut(s) 1231
XmiI GTMKAC 2 cut(s) 189, 1237
XmnI GAANNNNTTC 2 cut(s) 1533, 2223
XspI CTAG 6 cut(s) 602, 651, 669, 1163, 2493, 2609
ZraI GACGTC 2 cut(s) 729, 1241
ZrmI AGTACT 1 cut(s) 1588
Zsp2I ATGCAT 2 cut(s) 696, 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.