Rorug05G0362200

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
47921381 .. 47935740
14360 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0362200.1

Sequence Viewer

Length: 2631 bp
ATGTCGGCTTCTTTAGCTGCTTTTGAGCGCCCCCGCCCCGGAGCTTCTAACACGGTCTTCAAGAGTGGCCCATTATTCATATCTTCAAAAGGAATAGGGTGGAAGTCTTGGAAGAAGCGGTGGTTTATCCTCACACGGACTTCTTTGGTTTTCTTTAAAAACGATCCTAGCGCACTTCCACAAAAAGGTGGTGAAGTATATTTGACTTTAGGAGGCATTGACCTGAACAATTCTGGGAGTGTTGTTGTTAGAGAAGATAAAAAGCTGCTGACTGTTTTATTTCCTGATGGACGTGATGGGCGGGCTTTCACTCTTAAGGCTGAGACATCAGAAGACTTGTACGAGTGGAAGACAGCCCTTGAACATGCCCTTGCACAAGCTCCAAGTGCCGCCCTTGTCATGGGGCACAATGGGATTTTCAGAAATGACACAAATGATACAATAGAAGGGTCTTTCCATCAATGGAGGGATAAGCGTCCTGTTAAATCTTTGGTCGTTGGAAGACCAATTCTGCTTGCCCTAGAAGATATTGATGGAGGTCCTTCTTTCCTCGAGAAAGCTCTTCGGTTCCTTGAAAAGTTTGGTACTAAAGTTGAAGGAATTTTGCGACAGTCTGCTGATGTTGAGGAGGTAGAACGCAGGGTACAAGAGTATGAACAAGGCAAGACTGAATTTGATCCTGATGAGGATGCTCATGTTGTTGGTGATTGTGTCAAGCACGTTCTGAGAGAGCTGCCCTCATCTCCAGTACCAGCTTCTTGCTGCACTGCCTTGCTGGAGGCTTATAAAATTGATCGAAAGGAAGCTCGGATCAATGCAATGCGGTCTTCAATATTAGAGACATTTCCTGAACCAAACCGCCGTTTATTACAAAGAATTTTAAAGATGATGCATACCATCTCTTCTCACTCTCATGAGAATCGAATGAATCCATCTGCAGTTGCTGCTTGCATGGCACCCTTGCTCTTACGCCCTCTATTGGCTGGTGAATGTGAGTTGGATGATGACTTTGATATTAATGGTGATAATTCTGCCCAGCTTCTTGCTGCTGCAAATGCCGCCAATAATGCTCAAGCAATCATCACTACGCTTTTGGAGGAGTTTGAAAACATTTTTGATGATGAGAATTTACTGCGGTGTTCGATCTCAGCTGATTCTCGAATTGAAAATAGCGGCAGTGATGATTCGTCCGATGATGACAACCTTGATATAAAAGATAATGGTTACCATGATGCCGAAAATGAAGTTGATGCGGAAACAGATGATGACCAAGATCGTGTACACAGTGGGAAATTGAGTGAAAGCAGCGGTTATGCTGGCAGTGACCTCTATGATTATAAGGCATTTGGGGCTGATGATTCTGATGTTGGATCGCCTAATGGAAATCATGCTTCAGCTGAGAGTTCAAAATCAGTTGTTCCTCAACAGAATCCAAACGTCGAAGGGATGGATAGAGGAGGCAAACAGATAAAAGAAAATGAAAATTCAATTAGTGAGAATGGTGAAACGAGCATACCAAGCACATCACCTGCGGGAGAATCGTACAGATCAATGGGAGAGATTCTATCAGCAATGGATCCAGGGCATCCTTTACCAGTTGTGTCTGAATCAGGAGCTGTTAAGGCAGTGGGTAAAGTAACAGGCTCCAATCATAGTGCAAAGCGAACAGCATTTTGGGGAAGAAGCAATGCAAGAAAGACACTATCCATGGAATCAGTCGATTCTTCTGGAGAGGAAGAGCTTTCTATTCAGAGGCTTGAGATTGCTAAAAATGACCTGCAGCACAGGATTGCAAAAGAGGCTAGAGGAAATGCAATTTTACAAGCTAGCTTGGAGAGAAGAAAGCAAGCTTTACATGAGAGGCGCCTGGCACTGGAACAAGATGTTTCAAGATTACAAGAACAGCTACAAGCTGAAAGAGATCTTAGAGCTGCATTAGAGGTTGGTTTGAGCATGTCTTCTGGACAGTTAACCAGTTCACGTGGCATGGATTCTAAGACAAGAGCTGAACTTGAGGAGATAGCTCTTGCCGAAGCAGATGTGGCCAGGTTGAAACAGAAAGTTGCAGAACTCCACCATCAACTTAATCAGCAGCGACAGAATCATTATGGTTCTCTCTCTGATGCATGTGACCGTTACCAGAACGTCCAAAATCATAATTCTCAACAGAGGTTTCTTCAGCAAGATTTTGATGCAACCCTCGCCTTTTGTAATCATGAACGGAAACAGAGGAATGAGGAGAATTTGTTGGGGGCGGATTGGAGGAATATCAAAGGACAAATTCTAGCATCTGGAAGTAGCACAAGGCAGCCATCAAGGAAGCAATTCATGGATCCAGGTAGCTTAAGTGAATCCAAAAGTACTGATGTATCCACAAGTTTGTCTGTTGATGAGCTTTCTGCTGTTGATTCTGCTTCCATTCCCTCCACTTCAAGAGCAGCAGAGGTGGTGGATTATCCAAGACATCCATCAACAGCATCTTCAGCCTTGGTAGAATTAACAACTCGTCTTGATTTCTTCAAGGAAAGACGTTCTCAGCTAATGGAGCAGCTTCATAACCTTGATTTAAATTATGGCGCAACATCTTTGCAAGACTCAGTCTATAGACCATCGTCCCCACCATGGAATTGA

Protein Analysis

876

Amino Acids

96.68

Weight (kDa)

5.2

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH PF00169 20 - 124 2.5e-13 PH domain
RhoGAP PF00620 181 - 325 2.8e-34 RhoGAP domain
Lzipper-MIP1 PF14389 618 - 698 1.5e-21 Leucine-zipper of ternary complex factor MIP1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 786, 1338
AarI CACCTGC 1 cut(s) 1537
Acc36I ACCTGC 2 cut(s) 1537, 1785
AccB1I GGYRCC 2 cut(s) 955, 1863
AclWI GGATC 8 cut(s) 158, 671, 818, 1378, 1571, 1584, 2327, 2340
AcoI YGGCCR 1 cut(s) 2043
AcsI RAATTY 7 cut(s) 600, 671, 876, 1126, 1483, 2242, 2280
AcuI CTGAAG 3 cut(s) 1377, 2162, 2466
AcvI CACGTG 1 cut(s) 1982
AcyI GRCGYC 1 cut(s) 1864
AfaI GTAC 7 cut(s) 341, 586, 645, 750, 1281, 1544, 2362
AfiI CCNNNNNNNGG 6 cut(s) 38, 185, 400, 979, 1873, 2622
AflII CTTAAG 2 cut(s) 314, 2344
AjiI CACGTC 1 cut(s) 293
AjnI CCWGG 4 cut(s) 1579, 1866, 2045, 2335
AjuI GAANNNNNNNTTGG 2 cut(s) 1657, 1689
Alw26I GTCTC 2 cut(s) 317, 833
AlwI GGATC 8 cut(s) 158, 671, 818, 1378, 1571, 1584, 2327, 2340
AlwNI CAGNNNCTG 2 cut(s) 944, 1616
Ama87I CYCGRG 1 cut(s) 551
AoxI GGCC 2 cut(s) 67, 2043
ApoI RAATTY 7 cut(s) 600, 671, 876, 1126, 1483, 2242, 2280
AseI ATTAAT 1 cut(s) 1017
Asp700I GAANNNNTTC 1 cut(s) 2324
AspLEI GCGC 4 cut(s) 30, 173, 1866, 2579
AspS9I GGNCC 2 cut(s) 68, 539
AsuC2I CCSGG 1 cut(s) 39
AsuHPI GGTGA 6 cut(s) 203, 716, 998, 1034, 1514, 1518
AsuNHI GCTAGC 1 cut(s) 1826
AvaI CYCGRG 1 cut(s) 551
AvaII GGWCC 1 cut(s) 539
BaeGI GKGCMC 1 cut(s) 408
BaeI ACNNNNGTAYC 6 cut(s) 576, 609, 635, 668, 2352, 2385
BalI TGGCCA 1 cut(s) 2045
BamHI GGATCC 2 cut(s) 1576, 2332
BanI GGYRCC 2 cut(s) 955, 1863
BbrPI CACGTG 1 cut(s) 1982
BbsI GAAGAC 6 cut(s) 49, 339, 356, 508, 819, 1950
BceAI ACGGC 1 cut(s) 846
BciT130I CCWGG 4 cut(s) 1581, 1868, 2047, 2337
BciVI GTATCC 1 cut(s) 2380
BcnI CCSGG 1 cut(s) 39
BcoDI GTCTC 2 cut(s) 317, 833
BfaI CTAG 5 cut(s) 168, 521, 1803, 1827, 2285
BfmI CTRYAG 3 cut(s) 936, 1778, 2602
BfoI RGCGCY 2 cut(s) 31, 1867
BfrI CTTAAG 2 cut(s) 314, 2344
BfuAI ACCTGC 2 cut(s) 1537, 1785
BfuI GTATCC 1 cut(s) 2380
BglII AGATCT 1 cut(s) 1921
BmcAI AGTACT 1 cut(s) 2362
Bme1390I CCNGG 5 cut(s) 39, 1581, 1868, 2047, 2337
Bme18I GGWCC 1 cut(s) 539
BmeT110I CYCGRG 1 cut(s) 551
BmgBI CACGTC 1 cut(s) 293
BmgT120I GGNCC 2 cut(s) 68, 539
BmiI GGNNCC 6 cut(s) 569, 957, 1578, 1645, 1865, 2334
BmrFI CCNGG 5 cut(s) 39, 1581, 1868, 2047, 2337
BmsI GCATC 9 cut(s) 679, 879, 1222, 1240, 1594, 2113, 2182, 2297, 2486
BmtI GCTAGC 1 cut(s) 1830
BoxI GACNNNNGTC 1 cut(s) 2611
BpiI GAAGAC 6 cut(s) 49, 339, 356, 508, 819, 1950
BplI GAGNNNNNCTC 2 cut(s) 722, 754
BpmI CTGGAG 3 cut(s) 729, 797, 1749
BpuEI CTTGAG 3 cut(s) 1056, 1778, 2033
BpuMI CCSGG 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 1982
BsaHI GRCGYC 1 cut(s) 1864
BsaJI CCNNGG 5 cut(s) 37, 1580, 1707, 2487, 2621
BsaXI ACNNNNNCTCC 2 cut(s) 2231, 2261
Bsc4I CCNNNNNNNGG 6 cut(s) 38, 185, 400, 979, 1873, 2622
Bse1I ACTGG 4 cut(s) 746, 1595, 1878, 1974
Bse3DI GCAATG 3 cut(s) 825, 1578, 1693
BseBI CCWGG 4 cut(s) 1581, 1868, 2047, 2337
BseDI CCNNGG 5 cut(s) 37, 1580, 1707, 2487, 2621
BseGI GGATG 5 cut(s) 694, 1006, 1452, 1585, 2464
BseLI CCNNNNNNNGG 6 cut(s) 38, 185, 400, 979, 1873, 2622
BseMI GCAATG 3 cut(s) 825, 1578, 1693
BseMII CTCAG 6 cut(s) 312, 716, 1161, 1389, 2549, 2610
BseNI ACTGG 4 cut(s) 746, 1595, 1878, 1974
BseRI GAGGAG 5 cut(s) 641, 1112, 1470, 2030, 2252
BseSI GKGCMC 1 cut(s) 408
BseYI CCCAGC 1 cut(s) 1035
BsgI GTGCAG 1 cut(s) 748
BshFI GGCC 2 cut(s) 69, 2045
BshNI GGYRCC 2 cut(s) 955, 1863
BsiHKCI CYCGRG 1 cut(s) 551
BsiSI CCGG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 2599
BslI CCNNNNNNNGG 6 cut(s) 38, 185, 400, 979, 1873, 2622
BsmAI GTCTC 2 cut(s) 317, 833
BsmFI GGGAC 1 cut(s) 2599
BsnI GGCC 2 cut(s) 69, 2045
BsoBI CYCGRG 1 cut(s) 551
Bsp1286I GDGCHC 1 cut(s) 408
Bsp1407I TGTACA 1 cut(s) 1279
Bsp19I CCATGG 2 cut(s) 1707, 2621
BspANI GGCC 2 cut(s) 69, 2045
BspCNI CTCAG 6 cut(s) 313, 717, 1160, 1390, 2548, 2609
BspHI TCATGA 2 cut(s) 913, 2215
BspLI GGNNCC 6 cut(s) 569, 957, 1578, 1645, 1865, 2334
BspMAI CTGCAG 2 cut(s) 940, 1782
BspMI ACCTGC 2 cut(s) 1537, 1785
BspOI GCTAGC 1 cut(s) 1830
BspPI GGATC 8 cut(s) 158, 671, 818, 1378, 1571, 1584, 2327, 2340
BspQI GCTCTTC 2 cut(s) 567, 1731
BspT107I GGYRCC 2 cut(s) 955, 1863
BspTI CTTAAG 2 cut(s) 314, 2344
BsrDI GCAATG 3 cut(s) 825, 1578, 1693
BsrGI TGTACA 1 cut(s) 1279
BsrI ACTGG 4 cut(s) 746, 1595, 1878, 1974
BssECI CCNNGG 5 cut(s) 37, 1580, 1707, 2487, 2621
BssNI GRCGYC 1 cut(s) 1864
BssT1I CCWWGG 3 cut(s) 1707, 2487, 2621
Bst2UI CCWGG 4 cut(s) 1581, 1868, 2047, 2337
Bst4CI ACNGT 6 cut(s) 55, 274, 612, 1286, 1968, 2135
Bst6I CTCTTC 3 cut(s) 567, 907, 1731
BstACI GRCGYC 1 cut(s) 1864
BstAFI CTTAAG 2 cut(s) 314, 2344
BstAPI GCANNNNNTGC 1 cut(s) 944
BstAUI TGTACA 1 cut(s) 1279
BstBAI YACGTR 1 cut(s) 1982
BstC8I GCNNGC 6 cut(s) 303, 516, 949, 1318, 1828, 1848
BstDEI CTNAG 8 cut(s) 321, 725, 1147, 1398, 1925, 1995, 2535, 2596
BstDSI CCRYGG 2 cut(s) 1707, 2621
BstEII GGTNACC 1 cut(s) 1223
BstF5I GGATG 5 cut(s) 694, 1006, 1452, 1585, 2464
BstH2I RGCGCY 2 cut(s) 31, 1867
BstHHI GCGC 4 cut(s) 30, 173, 1866, 2579
BstMAI GTCTC 2 cut(s) 317, 833
BstNI CCWGG 4 cut(s) 1581, 1868, 2047, 2337
BstNSI RCATGY 3 cut(s) 368, 1957, 2130
BstPAI GACNNNNGTC 1 cut(s) 2611
BstPI GGTNACC 1 cut(s) 1223
BstSCI CCNGG 5 cut(s) 37, 1579, 1866, 2045, 2335
BstSFI CTRYAG 3 cut(s) 936, 1778, 2602
BstSLI GKGCMC 1 cut(s) 408
BstV2I GAAGAC 6 cut(s) 49, 339, 356, 508, 819, 1950
BstX2I RGATCY 3 cut(s) 1576, 1921, 2332
BstYI RGATCY 3 cut(s) 1576, 1921, 2332
BsuI GTATCC 1 cut(s) 2380
BsuRI GGCC 2 cut(s) 69, 2045
BtgI CCRYGG 2 cut(s) 1707, 2621
BtrI CACGTC 1 cut(s) 293
BtsCI GGATG 5 cut(s) 694, 1006, 1452, 1585, 2464
BtsI GCAGTG 4 cut(s) 765, 1183, 1327, 1632
BtsIMutI CAGTG 6 cut(s) 765, 1183, 1291, 1327, 1632, 1871
BveI ACCTGC 2 cut(s) 1537, 1785
Cac8I GCNNGC 6 cut(s) 303, 516, 949, 1318, 1828, 1848
CaiI CAGNNNCTG 2 cut(s) 944, 1616
CciI TCATGA 2 cut(s) 913, 2215
CfoI GCGC 4 cut(s) 30, 173, 1866, 2579
Cfr13I GGNCC 2 cut(s) 68, 539
CseI GACGC 1 cut(s) 464
Csp6I GTAC 7 cut(s) 340, 585, 644, 749, 1280, 1543, 2361
CviQI GTAC 7 cut(s) 340, 585, 644, 749, 1280, 1543, 2361
DdeI CTNAG 8 cut(s) 321, 725, 1147, 1398, 1925, 1995, 2535, 2596
DinI GGCGCC 1 cut(s) 1865
DraI TTTAAA 3 cut(s) 157, 882, 2568
EaeI YGGCCR 1 cut(s) 2043
Eam1104I CTCTTC 3 cut(s) 567, 907, 1731
EarI CTCTTC 3 cut(s) 567, 907, 1731
EciI GGCGGA 1 cut(s) 2270
Eco130I CCWWGG 3 cut(s) 1707, 2487, 2621
Eco47I GGWCC 1 cut(s) 539
Eco57I CTGAAG 3 cut(s) 1377, 2162, 2466
Eco72I CACGTG 1 cut(s) 1982
Eco88I CYCGRG 1 cut(s) 551
Eco91I GGTNACC 1 cut(s) 1223
EcoO109I RGGNCCY 1 cut(s) 539
EcoO65I GGTNACC 1 cut(s) 1223
EcoRII CCWGG 4 cut(s) 1579, 1866, 2045, 2335
EcoT14I CCWWGG 3 cut(s) 1707, 2487, 2621
EcoT22I ATGCAT 2 cut(s) 894, 2128
EgeI GGCGCC 1 cut(s) 1865
EheI GGCGCC 1 cut(s) 1865
ErhI CCWWGG 3 cut(s) 1707, 2487, 2621
FaqI GGGAC 1 cut(s) 2599
FauI CCCGC 3 cut(s) 41, 294, 1525
FokI GGATG 5 cut(s) 701, 1013, 1459, 1572, 2451
FspBI CTAG 5 cut(s) 168, 521, 1803, 1827, 2285
GlaI GCGC 4 cut(s) 29, 172, 1865, 2578
GsaI CCCAGC 1 cut(s) 1039
GsuI CTGGAG 3 cut(s) 729, 797, 1749
HaeII RGCGCY 2 cut(s) 31, 1867
HaeIII GGCC 2 cut(s) 69, 2045
HapII CCGG 1 cut(s) 39
HgaI GACGC 1 cut(s) 464
HhaI GCGC 4 cut(s) 30, 173, 1866, 2579
Hin1I GRCGYC 1 cut(s) 1864
Hin6I GCGC 4 cut(s) 28, 171, 1864, 2577
HinP1I GCGC 4 cut(s) 28, 171, 1864, 2577
HincII GTYRAC 1 cut(s) 1971
HindII GTYRAC 1 cut(s) 1971
HindIII AAGCTT 1 cut(s) 1848
HpaI GTTAAC 1 cut(s) 1971
HpaII CCGG 1 cut(s) 39
HphI GGTGA 6 cut(s) 203, 716, 998, 1034, 1514, 1518
Hpy166II GTNNAC 4 cut(s) 1280, 1282, 1971, 1979
Hpy188I TCNGA 9 cut(s) 331, 422, 726, 810, 1192, 1363, 1606, 1752, 2122
Hpy8I GTNNAC 4 cut(s) 1280, 1282, 1971, 1979
Hpy99I CGWCG 1 cut(s) 1442
HpyAV CCTTC 4 cut(s) 440, 552, 590, 1436
HpyCH4III ACNGT 6 cut(s) 55, 274, 612, 1286, 1968, 2135
HpyCH4IV ACGT 6 cut(s) 292, 720, 1437, 1981, 2145, 2530
HpyF3I CTNAG 8 cut(s) 321, 725, 1147, 1398, 1925, 1995, 2535, 2596
HpySE526I ACGT 6 cut(s) 292, 720, 1437, 1981, 2145, 2530
Hsp92I GRCGYC 1 cut(s) 1864
HspAI GCGC 4 cut(s) 28, 171, 1864, 2577
KasI GGCGCC 1 cut(s) 1863
KspAI GTTAAC 1 cut(s) 1971
LguI GCTCTTC 2 cut(s) 567, 1731
LmnI GCTCC 5 cut(s) 41, 385, 1613, 1649, 2545
LweI GCATC 9 cut(s) 679, 879, 1222, 1240, 1594, 2113, 2182, 2297, 2486
MaeI CTAG 5 cut(s) 168, 521, 1803, 1827, 2285
MaeII ACGT 6 cut(s) 292, 720, 1437, 1981, 2145, 2530
MaeIII GTNAC 5 cut(s) 1223, 1322, 1636, 2129, 2135
MflI RGATCY 3 cut(s) 1576, 1921, 2332
MhlI GDGCHC 1 cut(s) 408
MlsI TGGCCA 1 cut(s) 2045
MluNI TGGCCA 1 cut(s) 2045
Mly113I GGCGCC 1 cut(s) 1864
MlyI GAGTC 1 cut(s) 2588
MmeI TCCRAC 3 cut(s) 478, 978, 1348
Mox20I TGGCCA 1 cut(s) 2045
Mph1103I ATGCAT 2 cut(s) 894, 2128
MroXI GAANNNNTTC 1 cut(s) 2324
MscI TGGCCA 1 cut(s) 2045
MslI CAYNNNNRTG 1 cut(s) 912
Msp20I TGGCCA 1 cut(s) 2045
MspA1I CMGCKG 3 cut(s) 1151, 1308, 1397
MspCI CTTAAG 2 cut(s) 314, 2344
MspI CCGG 1 cut(s) 39
MspR9I CCNGG 5 cut(s) 39, 1581, 1868, 2047, 2337
MvaI CCWGG 4 cut(s) 1581, 1868, 2047, 2337
NarI GGCGCC 1 cut(s) 1864
NciI CCSGG 1 cut(s) 39
NcoI CCATGG 2 cut(s) 1707, 2621
NheI GCTAGC 1 cut(s) 1826
NlaIV GGNNCC 6 cut(s) 569, 957, 1578, 1645, 1865, 2334
NmuCI GTSAC 2 cut(s) 1322, 2129
NsiI ATGCAT 2 cut(s) 894, 2128
NspI RCATGY 3 cut(s) 368, 1957, 2130
PaeR7I CTCGAG 1 cut(s) 551
PagI TCATGA 2 cut(s) 913, 2215
PaqCI CACCTGC 1 cut(s) 1537
PciSI GCTCTTC 2 cut(s) 567, 1731
PdmI GAANNNNTTC 1 cut(s) 2324
PflFI GACNNNGTC 1 cut(s) 2597
PleI GAGTC 1 cut(s) 2588
PluTI GGCGCC 1 cut(s) 1867
PmaCI CACGTG 1 cut(s) 1982
PmlI CACGTG 1 cut(s) 1982
PpsI GAGTC 1 cut(s) 2588
Ppu21I YACGTR 1 cut(s) 1982
PpuMI RGGWCCY 1 cut(s) 539
PshAI GACNNNNGTC 1 cut(s) 2611
PshBI ATTAAT 1 cut(s) 1017
PsiI TTATAA 2 cut(s) 786, 1338
Psp5II RGGWCCY 1 cut(s) 539
Psp6I CCWGG 4 cut(s) 1579, 1866, 2045, 2335
PspCI CACGTG 1 cut(s) 1982
PspEI GGTNACC 1 cut(s) 1223
PspFI CCCAGC 1 cut(s) 1035
PspGI CCWGG 4 cut(s) 1579, 1866, 2045, 2335
PspN4I GGNNCC 6 cut(s) 569, 957, 1578, 1645, 1865, 2334
PspPI GGNCC 2 cut(s) 68, 539
PspPPI RGGWCCY 1 cut(s) 539
PsrI GAACNNNNNNTAC 2 cut(s) 627, 659
PstI CTGCAG 2 cut(s) 940, 1782
PstNI CAGNNNCTG 2 cut(s) 944, 1616
PsuI RGATCY 3 cut(s) 1576, 1921, 2332
PsyI GACNNNGTC 1 cut(s) 2597
PvuII CAGCTG 2 cut(s) 1151, 1397
RsaI GTAC 7 cut(s) 341, 586, 645, 750, 1281, 1544, 2362
RsaNI GTAC 7 cut(s) 340, 585, 644, 749, 1280, 1543, 2361
RseI CAYNNNNRTG 1 cut(s) 912
SapI GCTCTTC 2 cut(s) 567, 1731
Sau96I GGNCC 2 cut(s) 68, 539
ScaI AGTACT 1 cut(s) 2362
SchI GAGTC 1 cut(s) 2588
ScrFI CCNGG 5 cut(s) 39, 1581, 1868, 2047, 2337
SduI GDGCHC 1 cut(s) 408
SfaNI GCATC 9 cut(s) 679, 879, 1222, 1240, 1594, 2113, 2182, 2297, 2486
SfcI CTRYAG 3 cut(s) 936, 1778, 2602
SfoI GGCGCC 1 cut(s) 1865
Sfr274I CTCGAG 1 cut(s) 551
SinI GGWCC 1 cut(s) 539
SlaI CTCGAG 1 cut(s) 551
SmiI ATTTAAAT 1 cut(s) 2568
SmiMI CAYNNNNRTG 1 cut(s) 912
SmlI CTYRAG 6 cut(s) 314, 551, 1071, 1757, 2012, 2344
SmoI CTYRAG 6 cut(s) 314, 551, 1071, 1757, 2012, 2344
SspDI GGCGCC 1 cut(s) 1863
SspI AATATT 1 cut(s) 834
SspMI CTAG 5 cut(s) 168, 521, 1803, 1827, 2285
StyD4I CCNGG 5 cut(s) 37, 1579, 1866, 2045, 2335
StyI CCWWGG 3 cut(s) 1707, 2487, 2621
SwaI ATTTAAAT 1 cut(s) 2568
TaaI ACNGT 6 cut(s) 55, 274, 612, 1286, 1968, 2135
TaiI ACGT 6 cut(s) 295, 723, 1440, 1984, 2148, 2533
TaqI TCGA 7 cut(s) 552, 796, 922, 1142, 1159, 1440, 1719
TatI WGTACW 2 cut(s) 1279, 2360
TauI GCSGC 3 cut(s) 392, 1061, 1176
TscAI CASTG 6 cut(s) 772, 1183, 1291, 1327, 1632, 1878
TseFI GTSAC 2 cut(s) 1322, 2129
Tsp45I GTSAC 2 cut(s) 1322, 2129
TspDTI ATGAA 8 cut(s) 67, 669, 941, 1257, 1494, 2232, 2317, 2543
TspGWI ACGGA 2 cut(s) 151, 2236
TspRI CASTG 6 cut(s) 772, 1183, 1291, 1327, 1632, 1878
Tth111I GACNNNGTC 1 cut(s) 2597
Vha464I CTTAAG 2 cut(s) 314, 2344
VpaK11BI GGWCC 1 cut(s) 539
VspI ATTAAT 1 cut(s) 1017
XapI RAATTY 7 cut(s) 600, 671, 876, 1126, 1483, 2242, 2280
XceI RCATGY 3 cut(s) 368, 1957, 2130
XhoI CTCGAG 1 cut(s) 551
XmnI GAANNNNTTC 1 cut(s) 2324
XspI CTAG 5 cut(s) 168, 521, 1803, 1827, 2285
ZrmI AGTACT 1 cut(s) 2362
Zsp2I ATGCAT 2 cut(s) 894, 2128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.