Rmu_sc0000394.1_g000030

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000394.1
OG0000085
Physical Location & Seq
Forward (+)
80298 .. 83992
3695 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000394.1_g000030.1.cds

Sequence Viewer

Length: 3204 bp
atggttacagttaatcaaacccccgatttgaaaagaattcaaggcgtaatggcagataggctaggcatcaaattgatgagcgagacagatgagggaagagcttctgcattgtattcagagataatgagaagaaacaaaacccttataatcttggacaacgtttgggatatattagacctgccaagcataggaattcccagttacaaggtgcttcagagtcgcaactccaaagtcctacttaccacaaggagatggaatgcttgtcatgtcatgaggagccaagaaaatatcaccctcagtaccctatcgaaagaagattcatggacattgtttgtgaaatatgcaagaaagtcttttgagtcgacctatttcgaggatgttgcgaggaaggtagctagagaatgtggtggtctaccaattgcattgatagcagttgcaagggcacttggagataaagacctgacagaatgggaatacgcagctcaacggctagagaagtcgcgtgctgccaaccttgacgataatggagaagcatccgaatgcataaaactaagttatgatttcttgaaagatgaggactccaagtcatgcttcttgctttgttgcctattcccagaagactatgacatccgaatagaagacttgttcaagtatgggatcgggatcggattgtttcaagatactgacacaatccaagaagccagaggaaaagctggttcagtggccaagcaccttacacattctagcttgcttttggataggggaattgatggatgtgttaggatgcatgatgtcatccgggatacagccattcaaattgcacgatctgaagacgagcacggatttttcgtagaagctggctgtggtttgaagaattggccacgtcgattgcgtgaaggccattctgcaatttcagtcatgacgaacgacattcgcgagctacctgaagagctggtatgtccgaagctccaaattttattgctacaagagaattattttttagatcagatccctgatacttgtttcaaaaatactagtttactaagagtcgtcgatcttagtaacactagtatatcatccctatccatgtcatttattcacctaagcaatctccaaggtttgtatttagattcttgccagaatatatctgacatttccatactgaaaaattttaagaagcttgagattctcagtatgaaaaagtaccctctaaaggaattgtcaacagaaataagaaatttgaccaatttaagggtgttggatgttagtagccagggttcagtgcgtggaggtatcgtcagaattccatctggggtgatatcagaattgcgtaaattagaagaactgtgcttgcaatgtggattttgggactggaggagtcaagttgagggagaacgagaaacaactaatgttagctttgatgaggtaactagcttatcatatttgaacagtttgaaggtttgcatatctgacgcgaattgcatccctagaagggtttgggtcaatctgagttggaatgactttgatatatgtattggtagagacaggaacaccagaaatattatcagaaaccagcatagtcaactctggcgagatggtcataaatattcaagatctttggttcttgatacaaccatttgtatgttaccagcttggtttgtcagcgtggtgacagagaatacagagaggctaatgtatgtaaatttcacagggttaaataacattctcgtggaatatcaccatgggatgttacatagtctgaagcatctctcagttattggtcccaatgagagcttggtaacattgatcaatttggaggcaataccaagtatgcgaaataaacctgtgtttgagaaattggaagaattgcatctggagagtatgggttccctgaaggagttatgttctagtgaattaccatctaggtctctctggaatctgaaggtattgcaggtacatgattgtcctaagttgggaaatgtcctgttaccgtcaaaattgttacagagactggcaaatctggagaacctattctgtaagtgtgtgcctgaaatggaatatgtgtttggatgtgaaggatttgagctagaacaatcaaaactgagaaagatgaacttgtttgagctagaagcagtaaaaagcatatgtaatggtcctgctccacctgcaatgttccaagcgcttcacagtttgtcaatttaccgttgcaaatttcacggatgtctcttcacatttgatgtagctcaatgtctttttcaagtggaaatcatttcagtacagagttgccctatcttggaaagagtaatcgaagcaagcaaagaatcagagctcagtaagaagaccgttcttccaaaattgaagtacctaggcttggtggatcttcctatgttgtacagtggtagtgctgctattgatatggagtgtccttcattgcaacacttgtatgtggaagactgccctcatgttccggcctctgcttatgacttcgggagcaataaccaagtcatactcaacgatccactgcattacgcatctcagcaagccacaaaatttggcacacccctatcagcatgggatactctcatcaagtcacgtctcaaggtcggggaaaagatcttaacatcgatggagcctgaaatgatgcagagggcggttgaattcacggggaagatgtctcaaatcatacagacgaagcccgaatttgcaaagaagtttttacctagttcgttagcgaagcctgaattgttggagatgatgcctagactgatggagttgctgaatggaagtttgacagagaagaatcctgaatcgatggagaatcttacagcgttggcgaatatcactcctgatctgatgaatcatatacctgctgagattagtgagatgatggatctgatgactaaattgatggaggatacgaactttatcaagtccttgaccggaatcgtggagaacatccctggaatcatgaacttgcctcgaatcatagaggactttcctcggttgtttgagattttgccaatgactggatcggtggagaatatgcctggaatcatggaggactttgctcaattgattgagaattcgcctcagatggctgaatcgttgaaggactttgctcaatcggttgagaattttctgaatttgcctcaaatgactgaatggatgggaatcatggagaacttatctcagatgactgaatag

Protein Analysis

1067

Amino Acids

121.04

Weight (kDa)

5.39

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 146
AarI CACCTGC 1 cut(s) 2173
Acc36I ACCTGC 4 cut(s) 186, 1942, 2173, 2875
AccB7I CCANNNNNTGG 1 cut(s) 3026
AccI GTMKAC 2 cut(s) 362, 412
AccII CGCG 3 cut(s) 502, 936, 1475
AciI CCGC 1 cut(s) 2651
AclI AACGTT 1 cut(s) 159
AclWI GGATC 7 cut(s) 665, 671, 1003, 2385, 2510, 2898, 3037
AcoI YGGCCR 2 cut(s) 723, 878
AcuI CTGAAG 6 cut(s) 197, 849, 966, 1781, 1913, 1961
AfaI GTAC 6 cut(s) 301, 1205, 1956, 2277, 2363, 2393
AfeI AGCGCT 1 cut(s) 2181
AfiI CCNNNNNNNGG 8 cut(s) 188, 1213, 1251, 1492, 1973, 2293, 2371, 3026
AhdI GACNNNNNGTC 1 cut(s) 583
AhlI ACTAGT 2 cut(s) 1034, 1067
AjiI CACGTC 2 cut(s) 884, 2594
AjnI CCWGG 3 cut(s) 1272, 2959, 3046
AjuI GAANNNNNNNTTGG 4 cut(s) 575, 607, 2049, 2081
Alw21I GWGCWC 2 cut(s) 840, 2331
Alw26I GTCTC 7 cut(s) 77, 1536, 1932, 2002, 2228, 2600, 2679
AlwI GGATC 7 cut(s) 665, 671, 1003, 2385, 2510, 2898, 3037
AlwNI CAGNNNCTG 1 cut(s) 2011
Aor51HI AGCGCT 1 cut(s) 2181
AoxI GGCC 4 cut(s) 723, 878, 898, 2469
ApeKI GCWGC 3 cut(s) 479, 506, 2405
Asp700I GAANNNNTTC 2 cut(s) 100, 2030
AspA2I CCTAGG 1 cut(s) 2365
AspLEI GCGC 1 cut(s) 2182
AspS9I GGNCC 2 cut(s) 1781, 2153
AsuC2I CCSGG 1 cut(s) 800
AsuHPI GGTGA 5 cut(s) 283, 1091, 1327, 1681, 1730
AvaII GGWCC 2 cut(s) 1781, 2153
AvrII CCTAGG 1 cut(s) 2365
BaeGI GKGCMC 1 cut(s) 445
BalI TGGCCA 2 cut(s) 725, 880
BanII GRGCYC 1 cut(s) 2331
BauI CACGAG 1 cut(s) 1727
BbsI GAAGAC 5 cut(s) 624, 645, 837, 2345, 2457
Bbv12I GWGCWC 2 cut(s) 840, 2331
BbvI GCAGC 3 cut(s) 491, 493, 2392
BceAI ACGGC 1 cut(s) 503
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BciT130I CCWGG 3 cut(s) 1274, 2961, 3048
BciVI GTATCC 3 cut(s) 796, 2569, 2908
BclI TGATCA 1 cut(s) 1806
BcnI CCSGG 1 cut(s) 800
BcoDI GTCTC 7 cut(s) 77, 1536, 1932, 2002, 2228, 2600, 2679
BcuI ACTAGT 2 cut(s) 1034, 1067
BfoI RGCGCY 1 cut(s) 2183
BfuAI ACCTGC 4 cut(s) 186, 1942, 2173, 2875
BfuI GTATCC 3 cut(s) 796, 2569, 2908
BglII AGATCT 2 cut(s) 1613, 2613
BisI GCNGC 3 cut(s) 480, 507, 2406
BlnI CCTAGG 1 cut(s) 2365
BlsI GCNGC 3 cut(s) 481, 508, 2407
Bme1390I CCNGG 4 cut(s) 800, 1274, 2961, 3048
Bme18I GGWCC 2 cut(s) 1781, 2153
BmeRI GACNNNNNGTC 1 cut(s) 583
BmgBI CACGTC 2 cut(s) 884, 2594
BmgT120I GGNCC 2 cut(s) 1781, 2153
BmiI GGNNCC 4 cut(s) 278, 1783, 1888, 2631
BmrFI CCNGG 4 cut(s) 800, 1274, 2961, 3048
BmrI ACTGGG 1 cut(s) 192
BmsI GCATC 9 cut(s) 75, 542, 774, 1491, 1774, 1879, 2540, 2631, 2745
BmuI ACTGGG 1 cut(s) 192
BpiI GAAGAC 5 cut(s) 624, 645, 837, 2345, 2457
BpmI CTGGAG 3 cut(s) 1393, 1895, 2042
Bpu10I CCTNAGC 1 cut(s) 1103
BpuEI CTTGAG 2 cut(s) 1202, 2582
BpuMI CCSGG 1 cut(s) 800
Bsa29I ATCGAT 2 cut(s) 2624, 2810
BsaBI GATNNNNATC 2 cut(s) 662, 3170
BsaI GGTCTC 1 cut(s) 1932
BsaJI CCNNGG 6 cut(s) 1114, 1273, 1741, 2365, 2959, 2999
BsaWI WCCGGW 1 cut(s) 2939
BsaXI ACNNNNNCTCC 2 cut(s) 1281, 1311
Bsc4I CCNNNNNNNGG 8 cut(s) 188, 1213, 1251, 1492, 1973, 2293, 2371, 3026
Bse1I ACTGG 4 cut(s) 198, 1376, 2016, 3031
Bse3DI GCAATG 3 cut(s) 1361, 2175, 2429
Bse8I GATNNNNATC 2 cut(s) 662, 3170
BseBI CCWGG 3 cut(s) 1274, 2961, 3048
BseCI ATCGAT 2 cut(s) 2624, 2810
BseDI CCNNGG 6 cut(s) 1114, 1273, 1741, 2365, 2959, 2999
BseJI GATNNNNATC 2 cut(s) 662, 3170
BseLI CCNNNNNNNGG 8 cut(s) 188, 1213, 1251, 1492, 1973, 2293, 2371, 3026
BseMI GCAATG 3 cut(s) 1361, 2175, 2429
BseNI ACTGG 4 cut(s) 198, 1376, 2016, 3031
BseRI GAGGAG 2 cut(s) 289, 1390
BseSI GKGCMC 1 cut(s) 445
BseXI GCAGC 3 cut(s) 491, 493, 2392
Bsh1236I CGCG 3 cut(s) 502, 936, 1475
BshFI GGCC 4 cut(s) 725, 880, 900, 2471
BshVI ATCGAT 2 cut(s) 2624, 2810
BsiHKAI GWGCWC 2 cut(s) 840, 2331
BsiSI CCGG 3 cut(s) 799, 2468, 2940
BslFI GGGAC 2 cut(s) 1382, 1767
BslI CCNNNNNNNGG 8 cut(s) 188, 1213, 1251, 1492, 1973, 2293, 2371, 3026
BsmAI GTCTC 7 cut(s) 77, 1536, 1932, 2002, 2228, 2600, 2679
BsmBI CGTCTC 1 cut(s) 2600
BsmFI GGGAC 2 cut(s) 1382, 1767
BsmI GAATGC 2 cut(s) 262, 545
BsnI GGCC 4 cut(s) 725, 880, 900, 2471
Bso31I GGTCTC 1 cut(s) 1932
Bsp1286I GDGCHC 3 cut(s) 445, 840, 2331
Bsp1407I TGTACA 1 cut(s) 2391
Bsp19I CCATGG 1 cut(s) 1741
Bsp68I TCGCGA 1 cut(s) 936
BspACI CCGC 1 cut(s) 2651
BspANI GGCC 4 cut(s) 725, 880, 900, 2471
BspDI ATCGAT 2 cut(s) 2624, 2810
BspFNI CGCG 3 cut(s) 502, 936, 1475
BspHI TCATGA 3 cut(s) 270, 918, 2967
BspLI GGNNCC 4 cut(s) 278, 1783, 1888, 2631
BspMI ACCTGC 4 cut(s) 186, 1942, 2173, 2875
BspPI GGATC 7 cut(s) 665, 671, 1003, 2385, 2510, 2898, 3037
BspQI GCTCTTC 2 cut(s) 91, 942
BspTNI GGTCTC 1 cut(s) 1932
BsrDI GCAATG 3 cut(s) 1361, 2175, 2429
BsrGI TGTACA 1 cut(s) 2391
BsrI ACTGG 4 cut(s) 198, 1376, 2016, 3031
BssECI CCNNGG 6 cut(s) 1114, 1273, 1741, 2365, 2959, 2999
BssSI CACGAG 1 cut(s) 1727
BssT1I CCWWGG 3 cut(s) 1114, 1741, 2365
Bst2BI CACGAG 1 cut(s) 1727
Bst2UI CCWGG 3 cut(s) 1274, 2961, 3048
Bst4CI ACNGT 8 cut(s) 10, 1347, 1451, 1992, 2189, 2204, 2344, 2396
Bst6I CTCTTC 3 cut(s) 91, 942, 2231
BstAUI TGTACA 1 cut(s) 2391
BstC8I GCNNGC 7 cut(s) 504, 749, 859, 938, 1352, 2314, 2541
BstDSI CCRYGG 1 cut(s) 1741
BstFNI CGCG 3 cut(s) 502, 936, 1475
BstH2I RGCGCY 1 cut(s) 2183
BstHHI GCGC 1 cut(s) 2182
BstMAI GTCTC 7 cut(s) 77, 1536, 1932, 2002, 2228, 2600, 2679
BstMWI GCNNNNNNNGC 2 cut(s) 428, 2165
BstNI CCWGG 3 cut(s) 1274, 2961, 3048
BstSCI CCNGG 4 cut(s) 798, 1272, 2959, 3046
BstSLI GKGCMC 1 cut(s) 445
BstUI CGCG 3 cut(s) 502, 936, 1475
BstV1I GCAGC 3 cut(s) 491, 493, 2392
BstV2I GAAGAC 5 cut(s) 624, 645, 837, 2345, 2457
BstX2I RGATCY 5 cut(s) 1008, 1613, 2377, 2613, 2890
BstYI RGATCY 5 cut(s) 1008, 1613, 2377, 2613, 2890
Bsu15I ATCGAT 2 cut(s) 2624, 2810
BsuI GTATCC 3 cut(s) 796, 2569, 2908
BsuRI GGCC 4 cut(s) 725, 880, 900, 2471
BsuTUI ATCGAT 2 cut(s) 2624, 2810
BtgI CCRYGG 1 cut(s) 1741
BtrI CACGTC 2 cut(s) 884, 2594
BtsI GCAGTG 1 cut(s) 2519
BtsIMutI CAGTG 4 cut(s) 726, 1287, 2401, 2519
BtuMI TCGCGA 1 cut(s) 936
BveI ACCTGC 4 cut(s) 186, 1942, 2173, 2875
Cac8I GCNNGC 7 cut(s) 504, 749, 859, 938, 1352, 2314, 2541
CaiI CAGNNNCTG 1 cut(s) 2011
CciI TCATGA 3 cut(s) 270, 918, 2967
CfoI GCGC 1 cut(s) 2182
Cfr13I GGNCC 2 cut(s) 1781, 2153
ClaI ATCGAT 2 cut(s) 2624, 2810
CseI GACGC 1 cut(s) 1481
Csp6I GTAC 6 cut(s) 300, 1204, 1955, 2276, 2362, 2392
CspCI CAANNNNNGTGG 4 cut(s) 870, 905, 2533, 2568
CviQI GTAC 6 cut(s) 300, 1204, 1955, 2276, 2362, 2392
DriI GACNNNNNGTC 1 cut(s) 583
EaeI YGGCCR 2 cut(s) 723, 878
Eam1104I CTCTTC 3 cut(s) 91, 942, 2231
Eam1105I GACNNNNNGTC 1 cut(s) 583
EarI CTCTTC 3 cut(s) 91, 942, 2231
Ecl136II GAGCTC 1 cut(s) 2329
Eco130I CCWWGG 3 cut(s) 1114, 1741, 2365
Eco24I GRGCYC 1 cut(s) 2331
Eco31I GGTCTC 1 cut(s) 1932
Eco32I GATATC 1 cut(s) 1320
Eco47I GGWCC 2 cut(s) 1781, 2153
Eco47III AGCGCT 1 cut(s) 2181
Eco53kI GAGCTC 1 cut(s) 2329
Eco57I CTGAAG 6 cut(s) 197, 849, 966, 1781, 1913, 1961
EcoICRI GAGCTC 1 cut(s) 2329
EcoRI GAATTC 5 cut(s) 36, 192, 1302, 2657, 3082
EcoRII CCWGG 3 cut(s) 1272, 2959, 3046
EcoRV GATATC 1 cut(s) 1320
EcoT14I CCWWGG 3 cut(s) 1114, 1741, 2365
EcoT22I ATGCAT 2 cut(s) 545, 789
EcoT38I GRGCYC 1 cut(s) 2331
ErhI CCWWGG 3 cut(s) 1114, 1741, 2365
Esp3I CGTCTC 1 cut(s) 2600
FalI AAGNNNNNCTT 8 cut(s) 222, 254, 337, 369, 575, 607, 2099, 2131
FaqI GGGAC 2 cut(s) 1382, 1767
FauNDI CATATG 1 cut(s) 2144
FbaI TGATCA 1 cut(s) 1806
FblI GTMKAC 2 cut(s) 362, 412
Fnu4HI GCNGC 3 cut(s) 480, 507, 2406
FriOI GRGCYC 1 cut(s) 2331
Fsp4HI GCNGC 3 cut(s) 480, 507, 2406
GlaI GCGC 1 cut(s) 2181
GluI GCNGC 3 cut(s) 480, 507, 2406
GsuI CTGGAG 3 cut(s) 1393, 1895, 2042
HaeII RGCGCY 1 cut(s) 2183
HaeIII GGCC 4 cut(s) 725, 880, 900, 2471
HapII CCGG 3 cut(s) 799, 2468, 2940
HgaI GACGC 1 cut(s) 1481
HhaI GCGC 1 cut(s) 2182
Hin6I GCGC 1 cut(s) 2180
HinP1I GCGC 1 cut(s) 2180
HincII GTYRAC 3 cut(s) 363, 1224, 1583
HindII GTYRAC 3 cut(s) 363, 1224, 1583
HindIII AAGCTT 1 cut(s) 1178
HpaII CCGG 3 cut(s) 799, 2468, 2940
HphI GGTGA 5 cut(s) 283, 1091, 1327, 1681, 1730
Hpy166II GTNNAC 5 cut(s) 363, 413, 1040, 1224, 1583
Hpy8I GTNNAC 5 cut(s) 363, 413, 1040, 1224, 1583
Hpy99I CGWCG 2 cut(s) 888, 1055
HpyAV CCTTC 9 cut(s) 382, 890, 1450, 1485, 1888, 1936, 2069, 2436, 3103
HpyCH4III ACNGT 8 cut(s) 10, 1347, 1451, 1992, 2189, 2204, 2344, 2396
HpyCH4IV ACGT 3 cut(s) 159, 883, 2593
HpyF10VI GCNNNNNNNGC 2 cut(s) 428, 2165
HpySE526I ACGT 3 cut(s) 159, 883, 2593
HspAI GCGC 1 cut(s) 2180
Ksp22I TGATCA 1 cut(s) 1806
LguI GCTCTTC 2 cut(s) 91, 942
LmnI GCTCC 5 cut(s) 276, 972, 2164, 2490, 2629
Lsp1109I GCAGC 3 cut(s) 491, 493, 2392
LweI GCATC 9 cut(s) 75, 542, 774, 1491, 1774, 1879, 2540, 2631, 2745
MaeII ACGT 3 cut(s) 159, 883, 2593
MfeI CAATTG 2 cut(s) 417, 3071
MflI RGATCY 5 cut(s) 1008, 1613, 2377, 2613, 2890
MhlI GDGCHC 3 cut(s) 445, 840, 2331
MlsI TGGCCA 2 cut(s) 725, 880
MluNI TGGCCA 2 cut(s) 725, 880
MlyI GAGTC 5 cut(s) 226, 368, 572, 1056, 1387
MmeI TCCRAC 3 cut(s) 1239, 1493, 2727
Mox20I TGGCCA 2 cut(s) 725, 880
Mph1103I ATGCAT 2 cut(s) 545, 789
MroXI GAANNNNTTC 2 cut(s) 100, 2030
MscI TGGCCA 2 cut(s) 725, 880
MseI TTAA 5 cut(s) 12, 1173, 1250, 1715, 2618
MslI CAYNNNNRTG 4 cut(s) 538, 1640, 1727, 2442
Msp20I TGGCCA 2 cut(s) 725, 880
MspI CCGG 3 cut(s) 799, 2468, 2940
MspR9I CCNGG 4 cut(s) 800, 1274, 2961, 3048
MunI CAATTG 2 cut(s) 417, 3071
Mva1269I GAATGC 2 cut(s) 262, 545
MvaI CCWGG 3 cut(s) 1274, 2961, 3048
MvnI CGCG 3 cut(s) 502, 936, 1475
MwoI GCNNNNNNNGC 2 cut(s) 428, 2165
NciI CCSGG 1 cut(s) 800
NcoI CCATGG 1 cut(s) 1741
NdeI CATATG 1 cut(s) 2144
NlaIV GGNNCC 4 cut(s) 278, 1783, 1888, 2631
NmuCI GTSAC 2 cut(s) 1669, 2589
NruI TCGCGA 1 cut(s) 936
NsiI ATGCAT 2 cut(s) 545, 789
PagI TCATGA 3 cut(s) 270, 918, 2967
PaqCI CACCTGC 1 cut(s) 2173
PciSI GCTCTTC 2 cut(s) 91, 942
PcsI WCGNNNNNNNCGW 3 cut(s) 846, 889, 933
PctI GAATGC 2 cut(s) 262, 545
PdmI GAANNNNTTC 2 cut(s) 100, 2030
PflMI CCANNNNNTGG 1 cut(s) 3026
PfoI TCCNGGA 1 cut(s) 798
PkrI GCNGC 3 cut(s) 481, 508, 2407
PleI GAGTC 5 cut(s) 225, 367, 572, 1055, 1386
PpsI GAGTC 5 cut(s) 225, 367, 572, 1055, 1386
PsiI TTATAA 1 cut(s) 146
Psp124BI GAGCTC 1 cut(s) 2331
Psp1406I AACGTT 1 cut(s) 159
Psp6I CCWGG 3 cut(s) 1272, 2959, 3046
PspGI CCWGG 3 cut(s) 1272, 2959, 3046
PspN4I GGNNCC 4 cut(s) 278, 1783, 1888, 2631
PspPI GGNCC 2 cut(s) 1781, 2153
PsrI GAACNNNNNNTAC 2 cut(s) 1261, 1293
PstNI CAGNNNCTG 1 cut(s) 2011
PsuI RGATCY 5 cut(s) 1008, 1613, 2377, 2613, 2890
RruI TCGCGA 1 cut(s) 936
RsaI GTAC 6 cut(s) 301, 1205, 1956, 2277, 2363, 2393
RsaNI GTAC 6 cut(s) 300, 1204, 1955, 2276, 2362, 2392
RseI CAYNNNNRTG 4 cut(s) 538, 1640, 1727, 2442
SacI GAGCTC 1 cut(s) 2331
SalI GTCGAC 1 cut(s) 361
SapI GCTCTTC 2 cut(s) 91, 942
SaqAI TTAA 5 cut(s) 12, 1173, 1250, 1715, 2618
SatI GCNGC 3 cut(s) 480, 507, 2406
Sau96I GGNCC 2 cut(s) 1781, 2153
SchI GAGTC 5 cut(s) 226, 368, 572, 1056, 1387
ScrFI CCNGG 4 cut(s) 800, 1274, 2961, 3048
SduI GDGCHC 3 cut(s) 445, 840, 2331
SfaNI GCATC 9 cut(s) 75, 542, 774, 1491, 1774, 1879, 2540, 2631, 2745
SinI GGWCC 2 cut(s) 1781, 2153
SmiMI CAYNNNNRTG 4 cut(s) 538, 1640, 1727, 2442
SmlI CTYRAG 2 cut(s) 1181, 2597
SmoI CTYRAG 2 cut(s) 1181, 2597
SpeI ACTAGT 2 cut(s) 1034, 1067
SsiI CCGC 1 cut(s) 2651
SspI AATATT 2 cut(s) 1561, 1607
SstI GAGCTC 1 cut(s) 2331
StyD4I CCNGG 4 cut(s) 798, 1272, 2959, 3046
StyI CCWWGG 3 cut(s) 1114, 1741, 2365
TaaI ACNGT 8 cut(s) 10, 1347, 1451, 1992, 2189, 2204, 2344, 2396
TaiI ACGT 3 cut(s) 162, 886, 2596
TaqI TCGA 9 cut(s) 308, 362, 372, 886, 1053, 2307, 2624, 2810, 2980
TatI WGTACW 2 cut(s) 2275, 2391
Tru1I TTAA 5 cut(s) 12, 1173, 1250, 1715, 2618
Tru9I TTAA 5 cut(s) 12, 1173, 1250, 1715, 2618
TscAI CASTG 4 cut(s) 726, 1287, 2401, 2526
TseFI GTSAC 2 cut(s) 1669, 2589
TseI GCWGC 3 cut(s) 479, 506, 2405
Tsp45I GTSAC 2 cut(s) 1669, 2589
TspDTI ATGAA 6 cut(s) 309, 1211, 2126, 2418, 2870, 2984
TspGWI ACGGA 2 cut(s) 855, 2232
TspRI CASTG 4 cut(s) 726, 1287, 2401, 2526
Van91I CCANNNNNTGG 1 cut(s) 3026
VpaK11BI GGWCC 2 cut(s) 1781, 2153
XcmI CCANNNNNNNNNTGG 1 cut(s) 1792
XmaJI CCTAGG 1 cut(s) 2365
XmiI GTMKAC 2 cut(s) 362, 412
XmnI GAANNNNTTC 2 cut(s) 100, 2030
Zsp2I ATGCAT 2 cut(s) 545, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.