Rmu_sc0003547.1_g000008

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003547.1
OG0000085
Physical Location & Seq
Forward (+)
36760 .. 39509
2750 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003547.1_g000008.1.cds

Sequence Viewer

Length: 2676 bp
atggctttgagcatcccaagtgcttctgctcgtcagtggaagtatgacgtgtttttgagtttcaggggtgaaactcgccatggttttgtatcccatttatatgatgaattggaaagcacaggaatgattaccacattcatggatgaggaaaagctggaagtagggaaggctatttctccaaatcttgtaatggcaattgaagaatcaaggtttgctatagttgttctgtcgccaaactatgcttcttctccttggtgtttggatgaacttgcaaaggttcttcaatccatggaagggagggacagaatcctgccaattttctatcatgtggatccttctcatgtacgacatcaactggggacttttgcagaagcctttactaagcatgaagaaaattctaggcacagcaaagagaagttggaccagtggaggcttgctttaaaaaatgtggccgatctctctggatgggatgcaaagaatttgcggtctgaaagggaacttgttaaacgcattgtgaaatttgtctgcaataaggcacttcaagtatcaccacggcctattccaattgagttcaaagcgcagcctaccgaatatattgaatcaacaacacgggccagggataagcttactcagctgctgaaagataatgaaattactgtcatcggggttttcggcaagggaggtgttggcaagagaactatggtgaaacatgtcggcgcgcaagcccgagaacttaggcttgttcattatgtgattagggctgttgtagcccagagccctgatttgagaaatattcaaagcacattggccaatcagctgggcttaaaattcgaggaggaggagacagaaattggaagagccgctagattgaaggagaggataatgggaggaaataaaatcctcatagtcttagtcgacatttggcggagaatagatttgtcaagcataggaattcccaattacaaccagcttcaaagacacaattccaaactcatactaacctcaaggagcagaagtgtttgctattccatgcagtgccaagcaagcattcctctccctatcttatcagaagaagattcttggaacctttttgtggagaaatcgggaaagtcttttcatacatctatccggctgtatggtccagcaaggatgttagctagagaatgtggtggtttcccacttgtactgataacagttgctcgggcacttggagataaacacatagacgactggaaagaagcagctcgacgagtacgcacatcccaactagccagtcctgaggatgggggagatccattcagatttataaagttgagctatgattacttgaggtctgatgatgccagatcattcttcttgcttagctgcctattcccagaagactatgacatcccaatcgaagacttgctcatgtatgcaattgggaaaggattgcttcaagatgtcaaaacaatccaagaagccagagctacagcaaattcggtgatcaagtccctcggaacttccggcttacttttggactgtacaaaggaaggatgtgtaaggatgcatgatgtagtgcgggatgtagccgtgttgattttgttgtctgaagatggtcatagatctttggtaaaatcgggttgtgcattacggcattggccaaggattggtctgcagagaggctactctgcaatctcactaatgatgaatgatattgacaggcttcctgaagatttggtatgctcagaactccagattttgttactacaaaaaaatgctggtatatatgagatcccagaaaccttttttcaaagtttgaatgcactaagggtcttagatattaactttactaatatttcgtcaccacccaggtcaattaatatcctaaccaatctccaagctttgtttttagattattgcaataagttaattgacatatccatattcagaaacttgaagaaactcaagattcttagtatgaaggggtttcctcttcaggagttaccaaaagagataggatacttgaccaatctaaggatgctggacttaagtgggagttacactcttggtatatttccatataatgtcatgtcaagattgtgtaacttagaagaactgtacatgcaatgtaattctgcgggctggggaagcaaaattcatggaggtggagaagaaactaatgttgatcctgatgagttgattggcttgacacatttaaacattgtgaagcttcacatatctgatgcagaatgcttgcctaaaactgttatacgcagtttgagttgggtaaacttcgacatatgtatcagcactgaatcaccatctagagactactcttcaacaccatttttttcagatgatcattcaagaaccctgactcttggcacaacaatcaagagcttaccagattggtttatcaacacggtgacagagaaggcaggaaaactacagtacctaaagtgcgagggcctaaagaacattcttgtggaatatgacagaggaaggttacatggattgaagtatctagctataattgggccgcatgagaacttggaggtgttgatggaaacaataacatgggatccgaataaacctgtgttcgagaacttggaagagttgcatctccttggcgtgagttgcctgaaggaattatgtcgtggtgaattaccccctcgggtctctaatcagtcttaa

Protein Analysis

891

Amino Acids

100.8

Weight (kDa)

6.9

Isoelectric Point (pI)

53.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1307
AccB7I CCANNNNNTGG 1 cut(s) 1649
AccI GTMKAC 1 cut(s) 915
AccII CGCG 1 cut(s) 719
AciI CCGC 6 cut(s) 484, 861, 925, 1561, 2120, 2522
AclWI GGATC 7 cut(s) 326, 339, 1286, 1768, 2162, 2558, 2571
AcoI YGGCCR 3 cut(s) 450, 807, 1640
AcsI RAATTY 7 cut(s) 394, 478, 518, 827, 951, 1477, 2136
AcuI CTGAAG 4 cut(s) 1611, 1731, 1961, 2645
AfaI GTAC 6 cut(s) 345, 1185, 1254, 1525, 2102, 2435
AfiI CCNNNNNNNGG 5 cut(s) 294, 1093, 1283, 1649, 2016
AflII CTTAAG 1 cut(s) 2029
AflIII ACRYGT 2 cut(s) 48, 709
AjiI CACGTC 1 cut(s) 49
AjnI CCWGG 2 cut(s) 614, 1850
AjuI GAANNNNNNNTTGG 4 cut(s) 226, 258, 1032, 1064
Alw26I GTCTC 3 cut(s) 836, 2304, 2665
AlwI GGATC 7 cut(s) 326, 339, 1286, 1768, 2162, 2558, 2571
AlwNI CAGNNNCTG 1 cut(s) 637
Ama87I CYCGRG 3 cut(s) 726, 1200, 2655
AoxI GGCC 7 cut(s) 450, 554, 612, 807, 1640, 2449, 2519
ApeKI GCWGC 4 cut(s) 580, 634, 1241, 1365
ApoI RAATTY 7 cut(s) 394, 478, 518, 827, 951, 1477, 2136
AseI ATTAAT 1 cut(s) 1860
AspLEI GCGC 3 cut(s) 580, 719, 721
AspS9I GGNCC 5 cut(s) 421, 612, 1139, 2449, 2519
AsuHPI GGTGA 8 cut(s) 80, 540, 715, 1495, 1836, 2292, 2419, 2654
AvaI CYCGRG 3 cut(s) 726, 1200, 2655
AvaII GGWCC 2 cut(s) 421, 1139
AxyI CCTNAGG 1 cut(s) 1278
BaeGI GKGCMC 1 cut(s) 1207
BaeI ACNNNNGTAYC 4 cut(s) 2269, 2302, 2417, 2450
BalI TGGCCA 2 cut(s) 809, 1642
BamHI GGATCC 2 cut(s) 331, 2563
BanII GRGCYC 1 cut(s) 779
BbsI GAAGAC 2 cut(s) 1386, 1407
BbvI GCAGC 4 cut(s) 592, 621, 1253, 1352
BccI CCATC 5 cut(s) 459, 1277, 1589, 2311, 2539
BceAI ACGGC 3 cut(s) 569, 1556, 1649
BciT130I CCWGG 2 cut(s) 616, 1852
BciVI GTATCC 2 cut(s) 100, 1994
BclI TGATCA 2 cut(s) 1485, 2341
BcoDI GTCTC 3 cut(s) 836, 2304, 2665
BfaI CTAG 6 cut(s) 399, 864, 1158, 1268, 2307, 2507
BfmI CTRYAG 4 cut(s) 216, 1470, 1655, 2429
BfrI CTTAAG 1 cut(s) 2029
BfuI GTATCC 2 cut(s) 100, 1994
BglII AGATCT 1 cut(s) 1604
BisI GCNGC 6 cut(s) 581, 635, 861, 1242, 1366, 2522
BlpI GCTNAGC 1 cut(s) 1361
BlsI GCNGC 6 cut(s) 582, 636, 862, 1243, 1367, 2523
Bme1390I CCNGG 2 cut(s) 616, 1852
Bme18I GGWCC 2 cut(s) 421, 1139
BmeT110I CYCGRG 3 cut(s) 726, 1200, 2655
BmgBI CACGTC 1 cut(s) 49
BmgT120I GGNCC 5 cut(s) 421, 612, 1139, 2449, 2519
BmiI GGNNCC 3 cut(s) 333, 1085, 2565
BmrFI CCNGG 2 cut(s) 616, 1852
BmrI ACTGGG 1 cut(s) 365
BmsI GCATC 7 cut(s) 21, 460, 1330, 1536, 2010, 2215, 2611
BmuI ACTGGG 1 cut(s) 365
BpiI GAAGAC 2 cut(s) 1386, 1407
BplI GAGNNNNNCTC 2 cut(s) 2029, 2061
BpmI CTGGAG 1 cut(s) 1718
Bpu1102I GCTNAGC 1 cut(s) 1361
BpuEI CTTGAG 3 cut(s) 988, 1348, 1931
BsaI GGTCTC 1 cut(s) 2665
BsaXI ACNNNNNCTCC 2 cut(s) 1000, 1030
Bsc4I CCNNNNNNNGG 5 cut(s) 294, 1093, 1283, 1649, 2016
Bse1I ACTGG 4 cut(s) 360, 424, 1235, 1272
Bse21I CCTNAGG 1 cut(s) 1278
Bse3DI GCAATG 1 cut(s) 2114
BseBI CCWGG 2 cut(s) 616, 1852
BseLI CCNNNNNNNGG 5 cut(s) 294, 1093, 1283, 1649, 2016
BseMI GCAATG 1 cut(s) 2114
BseMII CTCAG 3 cut(s) 644, 1269, 1740
BseNI ACTGG 4 cut(s) 360, 424, 1235, 1272
BsePI GCGCGC 1 cut(s) 717
BseRI GAGGAG 3 cut(s) 848, 851, 854
BseSI GKGCMC 1 cut(s) 1207
BseXI GCAGC 4 cut(s) 592, 621, 1253, 1352
BseYI CCCAGC 2 cut(s) 817, 2124
Bsh1236I CGCG 1 cut(s) 719
BshFI GGCC 7 cut(s) 452, 556, 614, 809, 1642, 2451, 2521
BsiHKCI CYCGRG 3 cut(s) 726, 1200, 2655
BsiSI CCGG 2 cut(s) 1129, 1506
BslFI GGGAC 3 cut(s) 314, 373, 1477
BslI CCNNNNNNNGG 5 cut(s) 294, 1093, 1283, 1649, 2016
BsmAI GTCTC 3 cut(s) 836, 2304, 2665
BsmFI GGGAC 3 cut(s) 314, 373, 1477
BsmI GAATGC 3 cut(s) 1047, 1807, 2237
BsnI GGCC 7 cut(s) 452, 556, 614, 809, 1642, 2451, 2521
Bso31I GGTCTC 1 cut(s) 2665
BsoBI CYCGRG 3 cut(s) 726, 1200, 2655
Bsp1286I GDGCHC 2 cut(s) 779, 1207
Bsp1407I TGTACA 2 cut(s) 1523, 2100
Bsp1720I GCTNAGC 1 cut(s) 1361
Bsp19I CCATGG 2 cut(s) 79, 288
BspACI CCGC 6 cut(s) 484, 861, 925, 1561, 2120, 2522
BspANI GGCC 7 cut(s) 452, 556, 614, 809, 1642, 2451, 2521
BspCNI CTCAG 3 cut(s) 643, 1270, 1739
BspFNI CGCG 1 cut(s) 719
BspLI GGNNCC 3 cut(s) 333, 1085, 2565
BspMAI CTGCAG 1 cut(s) 1659
BspPI GGATC 7 cut(s) 326, 339, 1286, 1768, 2162, 2558, 2571
BspQI GCTCTTC 1 cut(s) 850
BspTI CTTAAG 1 cut(s) 2029
BspTNI GGTCTC 1 cut(s) 2665
BsrDI GCAATG 1 cut(s) 2114
BsrGI TGTACA 2 cut(s) 1523, 2100
BsrI ACTGG 4 cut(s) 360, 424, 1235, 1272
BssHII GCGCGC 1 cut(s) 717
BssT1I CCWWGG 5 cut(s) 79, 251, 288, 1643, 2608
Bst2UI CCWGG 2 cut(s) 616, 1852
Bst4CI ACNGT 7 cut(s) 658, 1195, 1523, 2100, 2248, 2407, 2433
Bst6I CTCTTC 4 cut(s) 850, 1980, 2323, 2589
BstAFI CTTAAG 1 cut(s) 2029
BstAUI TGTACA 2 cut(s) 1523, 2100
BstC8I GCNNGC 6 cut(s) 435, 719, 723, 1045, 2122, 2237
BstDSI CCRYGG 3 cut(s) 79, 288, 551
BstFNI CGCG 1 cut(s) 719
BstHHI GCGC 3 cut(s) 580, 719, 721
BstMAI GTCTC 3 cut(s) 836, 2304, 2665
BstMWI GCNNNNNNNGC 5 cut(s) 631, 767, 1044, 2130, 2619
BstNI CCWGG 2 cut(s) 616, 1852
BstNSI RCATGY 2 cut(s) 713, 2107
BstSCI CCNGG 2 cut(s) 614, 1850
BstSFI CTRYAG 4 cut(s) 216, 1470, 1655, 2429
BstSLI GKGCMC 1 cut(s) 1207
BstUI CGCG 1 cut(s) 719
BstV1I GCAGC 4 cut(s) 592, 621, 1253, 1352
BstV2I GAAGAC 2 cut(s) 1386, 1407
BstX2I RGATCY 5 cut(s) 331, 1291, 1604, 1773, 2563
BstXI CCANNNNNNTGG 2 cut(s) 139, 817
BstYI RGATCY 5 cut(s) 331, 1291, 1604, 1773, 2563
Bsu36I CCTNAGG 1 cut(s) 1278
BsuI GTATCC 2 cut(s) 100, 1994
BsuRI GGCC 7 cut(s) 452, 556, 614, 809, 1642, 2451, 2521
BtgI CCRYGG 3 cut(s) 79, 288, 551
BtrI CACGTC 1 cut(s) 49
BtsI GCAGTG 1 cut(s) 1040
BtsIMutI CAGTG 4 cut(s) 41, 431, 1040, 2292
Cac8I GCNNGC 6 cut(s) 435, 719, 723, 1045, 2122, 2237
CaiI CAGNNNCTG 1 cut(s) 637
CfoI GCGC 3 cut(s) 580, 719, 721
Cfr13I GGNCC 5 cut(s) 421, 612, 1139, 2449, 2519
Csp6I GTAC 6 cut(s) 344, 1184, 1253, 1524, 2101, 2434
CviQI GTAC 6 cut(s) 344, 1184, 1253, 1524, 2101, 2434
DraI TTTAAA 2 cut(s) 441, 2199
EaeI YGGCCR 3 cut(s) 450, 807, 1640
Eam1104I CTCTTC 4 cut(s) 850, 1980, 2323, 2589
EarI CTCTTC 4 cut(s) 850, 1980, 2323, 2589
EciI GGCGGA 1 cut(s) 940
Eco130I CCWWGG 5 cut(s) 79, 251, 288, 1643, 2608
Eco24I GRGCYC 1 cut(s) 779
Eco31I GGTCTC 1 cut(s) 2665
Eco47I GGWCC 2 cut(s) 421, 1139
Eco57I CTGAAG 4 cut(s) 1611, 1731, 1961, 2645
Eco81I CCTNAGG 1 cut(s) 1278
Eco88I CYCGRG 3 cut(s) 726, 1200, 2655
EcoO109I RGGNCCY 1 cut(s) 2449
EcoRI GAATTC 1 cut(s) 951
EcoRII CCWGG 2 cut(s) 614, 1850
EcoT14I CCWWGG 5 cut(s) 79, 251, 288, 1643, 2608
EcoT22I ATGCAT 1 cut(s) 1551
EcoT38I GRGCYC 1 cut(s) 779
ErhI CCWWGG 5 cut(s) 79, 251, 288, 1643, 2608
FalI AAGNNNNNCTT 2 cut(s) 1419, 1451
FaqI GGGAC 3 cut(s) 314, 373, 1477
FauI CCCGC 2 cut(s) 1554, 2113
FauNDI CATATG 1 cut(s) 2282
FbaI TGATCA 2 cut(s) 1485, 2341
FblI GTMKAC 1 cut(s) 915
Fnu4HI GCNGC 6 cut(s) 581, 635, 861, 1242, 1366, 2522
FriOI GRGCYC 1 cut(s) 779
Fsp4HI GCNGC 6 cut(s) 581, 635, 861, 1242, 1366, 2522
FspBI CTAG 6 cut(s) 399, 864, 1158, 1268, 2307, 2507
GlaI GCGC 3 cut(s) 579, 718, 720
GluI GCNGC 6 cut(s) 581, 635, 861, 1242, 1366, 2522
GsaI CCCAGC 2 cut(s) 821, 2128
GsuI CTGGAG 1 cut(s) 1718
HaeIII GGCC 7 cut(s) 452, 556, 614, 809, 1642, 2451, 2521
HapII CCGG 2 cut(s) 1129, 1506
HhaI GCGC 3 cut(s) 580, 719, 721
Hin6I GCGC 3 cut(s) 578, 717, 719
HinP1I GCGC 3 cut(s) 578, 717, 719
HincII GTYRAC 1 cut(s) 916
HindII GTYRAC 1 cut(s) 916
HindIII AAGCTT 3 cut(s) 623, 1881, 2210
HinfI GANTC 7 cut(s) 203, 306, 599, 1076, 1951, 2297, 2359
HpaII CCGG 2 cut(s) 1129, 1506
HphI GGTGA 8 cut(s) 80, 540, 715, 1495, 1836, 2292, 2419, 2654
Hpy166II GTNNAC 2 cut(s) 916, 2272
Hpy8I GTNNAC 2 cut(s) 916, 2272
Hpy99I CGWCG 1 cut(s) 1251
HpyAV CCTTC 9 cut(s) 160, 287, 345, 865, 1526, 1957, 2410, 2478, 2620
HpyCH4III ACNGT 7 cut(s) 658, 1195, 1523, 2100, 2248, 2407, 2433
HpyCH4IV ACGT 1 cut(s) 48
HpyF10VI GCNNNNNNNGC 5 cut(s) 631, 767, 1044, 2130, 2619
HpySE526I ACGT 1 cut(s) 48
HspAI GCGC 3 cut(s) 578, 717, 719
Ksp22I TGATCA 2 cut(s) 1485, 2341
LguI GCTCTTC 1 cut(s) 850
LmnI GCTCC 1 cut(s) 1008
Lsp1109I GCAGC 4 cut(s) 592, 621, 1253, 1352
LweI GCATC 7 cut(s) 21, 460, 1330, 1536, 2010, 2215, 2611
MaeI CTAG 6 cut(s) 399, 864, 1158, 1268, 2307, 2507
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 7 cut(s) 1743, 1842, 1983, 2039, 2084, 2407, 2487
MfeI CAATTG 3 cut(s) 195, 564, 1419
MflI RGATCY 5 cut(s) 331, 1291, 1604, 1773, 2563
MhlI GDGCHC 2 cut(s) 779, 1207
MlsI TGGCCA 2 cut(s) 809, 1642
MluNI TGGCCA 2 cut(s) 809, 1642
MlyI GAGTC 1 cut(s) 2353
MmeI TCCRAC 1 cut(s) 399
Mox20I TGGCCA 2 cut(s) 809, 1642
Mph1103I ATGCAT 1 cut(s) 1551
MscI TGGCCA 2 cut(s) 809, 1642
MseI TTAA 9 cut(s) 440, 504, 824, 1824, 1860, 1910, 2030, 2198, 2674
MslI CAYNNNNRTG 5 cut(s) 99, 122, 137, 2145, 2465
Msp20I TGGCCA 2 cut(s) 809, 1642
MspA1I CMGCKG 2 cut(s) 634, 817
MspCI CTTAAG 1 cut(s) 2029
MspI CCGG 2 cut(s) 1129, 1506
MspR9I CCNGG 2 cut(s) 616, 1852
MunI CAATTG 3 cut(s) 195, 564, 1419
Mva1269I GAATGC 3 cut(s) 1047, 1807, 2237
MvaI CCWGG 2 cut(s) 616, 1852
MvnI CGCG 1 cut(s) 719
MwoI GCNNNNNNNGC 5 cut(s) 631, 767, 1044, 2130, 2619
NcoI CCATGG 2 cut(s) 79, 288
NdeI CATATG 1 cut(s) 2282
NlaIV GGNNCC 3 cut(s) 333, 1085, 2565
NmuCI GTSAC 2 cut(s) 1842, 2407
NsiI ATGCAT 1 cut(s) 1551
NspI RCATGY 2 cut(s) 713, 2107
PauI GCGCGC 1 cut(s) 717
PciI ACATGT 1 cut(s) 709
PciSI GCTCTTC 1 cut(s) 850
PctI GAATGC 3 cut(s) 1047, 1807, 2237
PfeI GAWTC 6 cut(s) 203, 306, 599, 1076, 1951, 2297
PflMI CCANNNNNTGG 1 cut(s) 1649
PkrI GCNGC 6 cut(s) 582, 636, 862, 1243, 1367, 2523
PleI GAGTC 1 cut(s) 2353
PpsI GAGTC 1 cut(s) 2353
PscI ACATGT 1 cut(s) 709
PshBI ATTAAT 1 cut(s) 1860
PsiI TTATAA 1 cut(s) 1307
Psp6I CCWGG 2 cut(s) 614, 1850
PspFI CCCAGC 2 cut(s) 817, 2124
PspGI CCWGG 2 cut(s) 614, 1850
PspN4I GGNNCC 3 cut(s) 333, 1085, 2565
PspPI GGNCC 5 cut(s) 421, 612, 1139, 2449, 2519
PstI CTGCAG 1 cut(s) 1659
PstNI CAGNNNCTG 1 cut(s) 637
PsuI RGATCY 5 cut(s) 331, 1291, 1604, 1773, 2563
PteI GCGCGC 1 cut(s) 717
PvuII CAGCTG 2 cut(s) 634, 817
RsaI GTAC 6 cut(s) 345, 1185, 1254, 1525, 2102, 2435
RsaNI GTAC 6 cut(s) 344, 1184, 1253, 1524, 2101, 2434
RseI CAYNNNNRTG 5 cut(s) 99, 122, 137, 2145, 2465
SalI GTCGAC 1 cut(s) 914
SapI GCTCTTC 1 cut(s) 850
SaqAI TTAA 9 cut(s) 440, 504, 824, 1824, 1860, 1910, 2030, 2198, 2674
SatI GCNGC 6 cut(s) 581, 635, 861, 1242, 1366, 2522
Sau96I GGNCC 5 cut(s) 421, 612, 1139, 2449, 2519
SchI GAGTC 1 cut(s) 2353
ScrFI CCNGG 2 cut(s) 616, 1852
SduI GDGCHC 2 cut(s) 779, 1207
SfaNI GCATC 7 cut(s) 21, 460, 1330, 1536, 2010, 2215, 2611
SfcI CTRYAG 4 cut(s) 216, 1470, 1655, 2429
SinI GGWCC 2 cut(s) 421, 1139
SmiMI CAYNNNNRTG 5 cut(s) 99, 122, 137, 2145, 2465
SmlI CTYRAG 4 cut(s) 1003, 1327, 1946, 2029
SmoI CTYRAG 4 cut(s) 1003, 1327, 1946, 2029
SsiI CCGC 6 cut(s) 484, 861, 925, 1561, 2120, 2522
SspI AATATT 2 cut(s) 793, 1837
SspMI CTAG 6 cut(s) 399, 864, 1158, 1268, 2307, 2507
StyD4I CCNGG 2 cut(s) 614, 1850
StyI CCWWGG 5 cut(s) 79, 251, 288, 1643, 2608
TaaI ACNGT 7 cut(s) 658, 1195, 1523, 2100, 2248, 2407, 2433
TaiI ACGT 1 cut(s) 51
TaqI TCGA 6 cut(s) 831, 915, 1246, 1398, 2277, 2583
TatI WGTACW 3 cut(s) 1183, 1523, 2100
TauI GCSGC 2 cut(s) 863, 2524
TfiI GAWTC 6 cut(s) 203, 306, 599, 1076, 1951, 2297
Tru1I TTAA 9 cut(s) 440, 504, 824, 1824, 1860, 1910, 2030, 2198, 2674
Tru9I TTAA 9 cut(s) 440, 504, 824, 1824, 1860, 1910, 2030, 2198, 2674
TscAI CASTG 4 cut(s) 41, 431, 1040, 2299
TseFI GTSAC 2 cut(s) 1842, 2407
TseI GCWGC 4 cut(s) 580, 634, 1241, 1365
Tsp45I GTSAC 2 cut(s) 1842, 2407
TspRI CASTG 4 cut(s) 41, 431, 1040, 2299
Van91I CCANNNNNTGG 1 cut(s) 1649
Vha464I CTTAAG 1 cut(s) 2029
VpaK11BI GGWCC 2 cut(s) 421, 1139
VspI ATTAAT 1 cut(s) 1860
XapI RAATTY 7 cut(s) 394, 478, 518, 827, 951, 1477, 2136
XbaI TCTAGA 1 cut(s) 2306
XceI RCATGY 2 cut(s) 713, 2107
XmiI GTMKAC 1 cut(s) 915
XspI CTAG 6 cut(s) 399, 864, 1158, 1268, 2307, 2507
Zsp2I ATGCAT 1 cut(s) 1551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.