Rmu_sc0002075.1_g000004

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002075.1
OG0000085
Physical Location & Seq
Reverse (-)
19931 .. 26444
6514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002075.1_g000004.1.cds

Sequence Viewer

Length: 2829 bp
atgctgggctttgaactcaaggagaagacagaaattgtaagagcccgtgaagtgaagaagaaaataatgagaggaacaaggatcctcataatcttggatgacatttggaagagaatagagttttcagacattggaattccgagccacaacgatcttcaaagatgcaattccaaagttctactgaccaccagaaaattggatgtttgccgttccatggattgccatgcaaacatacgtctcaatatcttatcagaagaagattctcggagcttatttgtgaaggaagcaaggaagtaccctcttgacaaatcatccaatttctatgatgtagcgagtgaggtggctagagaatgcgctggtcttcctattgctttgatagcagttgcgagggcccttcgaggtgaaggtttggacagatggaaagaagctgctcgaaggctaaaagcgtctcaaccccccacggctaaaagcgtctcaaccccccaagattatgatatcccaattgaatacttgctcaattatggaattgggaaaggaatgtttcaagattccgacatgctagacgcccgcgccacaacaaattcagcggtgaaggcccttaaagactctagcttgcttttggactctagacatgacgtatgtgtaaggatgcatgatgtcattcgggatatggcaatattgatatcattatctgaagacggcccgcggttcttggtgaaagttggctgtgaattgaagaattggccaaggattgatgcacgtaagggctactctgcaatctcactaatgaagaacaaaatttgcaagctacccgaagagttggtatgttcaaatctccagattttattactgcaagacaatgcttcattaaatgatatccctaactctttcttccaaaatcagaaagaattaagagtcttggatcttagccgcactggtatttcattactaccccaatcaatcagtttcctaaccaaccttcaagctttgtatttagattactgcaagaacataattgacatttctgtaatcggaaaacttaacatgcttgagattcttagtatgagaggaaatgctctgaaagaattgccaagagaaataggacagttgacctgtctaaggatgctggatatcactagagctgatagattccttttcacatccacgaatggatgtattggcacaattccatctaaagtgatatcaaagttgcataaattagaagaactgtacatgcaatgtggattttgggagtgggggagtaaaattgatggagaaggagaagaaactaatattggctttgatgaattagttggtttatcatatttaagcattttgaaagtttggatgtcagatgtaaattgcatccctataagtgttgaggttgaaccgaattgggtttactttgatattaccatttgcagcaacagttatttcacttcgaacggtcaatctggtcataattgtagatccttgagttttaatggaactgacactaccataggaatctgtccggactggtttgtcaacgctgtggtaaagaatactgagaggctactttatagttactgcaaagggttaagtaacattcttgtggaatatgactgtggaaggttacatggattgaaagttctctctgtaattggttgcggtgagaacttgaaagaattgatgaatgcaataacatgtgttctagatatgcctgtgtttgagaatttggaagagttgtatctggaatacctggattacttgaagcagttatgtgttggtgagttaccaccaggatctctctgcagtctgaaattattgaaggtccttaagtgtcctatcttggggaatgtactgttgccatctaaattgttgcagcagctaccaaaactggaaaaactaatctgtgagtcaagtgaagtggaacatgtgtttggatgtgaaggttttgagccagatcaaacaaatctgagagagatggatttacggtatctagatgtcgtaacaagcatatgtaatggtcctgctccacatggaatgttccaggctctaaagaaattggtcattcgtaattgcaacttccagggaagcctcttcacatttgatgtagctcagtgtctttttcaattggaagaccttattgtatccgaatgccctgtcttggaaagagtaattgaagaaaggagggaaacattgaccaacaagaagaccattcttccaaaattgaagaacctagctttggaagatcttccaatgttgtacaagggaagtgctactattgattttgagtgtccttcattggaaaaactgagtctgtttggctgcccccacttgtcatttccatcctctgcttctgactacttccgcagcaggaaccaagtcgttttcaatgatgctcctcgtcattctctgctactcagcaaactaggggatttcatcgttcttgaactttgggagaagcccctgcgccacagaagccgaagaaagaacctaccgatgacgaaaagacgtagtaatggggaatatataaaagctggtttgattgagctggagcattggagctataaagcaacagatgagtatgcaggttcagcttgggatgaactcaaccatacttggcaagccataggatccctgggtaaaatctacgtgattgctgccaagaagtcttcagcgaaggtggtgagtatgaatagaacaaaattcagcggcttcaacgcattctcgaaaaggtctgatccttccattggatactatgcatttgttatgacttatgatcaatgtcatgattgttactgcatcttcaatgacatgctagggttaggttctattagaagttga

Protein Analysis

942

Amino Acids

106.62

Weight (kDa)

6.92

Isoelectric Point (pI)

41.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1523
Acc36I ACCTGC 1 cut(s) 2564
AccII CGCG 2 cut(s) 570, 706
AccIII TCCGGA 1 cut(s) 1513
AciI CCGC 8 cut(s) 568, 587, 704, 706, 931, 1650, 2353, 2697
AclWI GGATC 8 cut(s) 76, 89, 930, 1464, 1792, 2613, 2626, 2720
AcoI YGGCCR 1 cut(s) 743
AcsI RAATTY 5 cut(s) 135, 580, 798, 1714, 2690
AcuI CTGAAG 2 cut(s) 714, 2643
AcyI GRCGYC 1 cut(s) 564
AfaI GTAC 4 cut(s) 296, 1232, 1842, 2249
AfiI CCNNNNNNNGG 6 cut(s) 214, 1119, 1832, 2149, 2227, 2735
AflII CTTAAG 1 cut(s) 1817
AflIII ACRYGT 2 cut(s) 1685, 1915
AjnI CCWGG 5 cut(s) 1740, 1780, 2031, 2070, 2622
AjuI GAANNNNNNNTTGG 6 cut(s) 1278, 1310, 1905, 1937, 2210, 2242
AloI GAACNNNNNNTCC 2 cut(s) 1614, 1646
Alw26I GTCTC 3 cut(s) 242, 453, 478
AlwI GGATC 8 cut(s) 76, 89, 930, 1464, 1792, 2613, 2626, 2720
Aor13HI TCCGGA 1 cut(s) 1513
AoxI GGCC 4 cut(s) 390, 594, 700, 743
ApaI GGGCCC 1 cut(s) 394
ApeKI GCWGC 7 cut(s) 428, 1422, 1864, 1867, 2310, 2355, 2645
ApoI RAATTY 5 cut(s) 135, 580, 798, 1714, 2690
ArsI GACNNNNNNTTYG 2 cut(s) 2130, 2162
Asp700I GAANNNNTTC 1 cut(s) 2235
AspLEI GCGC 3 cut(s) 356, 572, 2457
AspS9I GGNCC 6 cut(s) 390, 391, 595, 701, 1813, 2009
AsuHPI GGTGA 6 cut(s) 413, 601, 727, 1664, 1781, 2683
AsuII TTCGAA 1 cut(s) 1442
AvaII GGWCC 2 cut(s) 1813, 2009
BaeGI GKGCMC 1 cut(s) 394
BalI TGGCCA 1 cut(s) 745
BamHI GGATCC 2 cut(s) 81, 2618
BanII GRGCYC 2 cut(s) 46, 394
BbsI GAAGAC 6 cut(s) 32, 353, 702, 2127, 2201, 2649
BbvI GCAGC 7 cut(s) 415, 1434, 1876, 1879, 2297, 2367, 2632
BccI CCATC 6 cut(s) 411, 1198, 1265, 1858, 1960, 2338
BceAI ACGGC 3 cut(s) 192, 477, 715
BciT130I CCWGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
BciVI GTATCC 2 cut(s) 2143, 2732
BclI TGATCA 1 cut(s) 2764
BcoDI GTCTC 3 cut(s) 242, 453, 478
BfmI CTRYAG 1 cut(s) 1792
BfrI CTTAAG 1 cut(s) 1817
BfuAI ACCTGC 1 cut(s) 2564
BfuI GTATCC 2 cut(s) 2143, 2732
BglII AGATCT 1 cut(s) 2233
BisI GCNGC 9 cut(s) 429, 931, 1423, 1865, 1868, 2311, 2356, 2646, 2698
BlsI GCNGC 9 cut(s) 430, 932, 1424, 1866, 1869, 2312, 2357, 2647, 2699
Bme1390I CCNGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
Bme18I GGWCC 2 cut(s) 1813, 2009
BmgT120I GGNCC 6 cut(s) 390, 391, 595, 701, 1813, 2009
BmiI GGNNCC 4 cut(s) 83, 392, 2363, 2620
BmrFI CCNGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
BmsI GCATC 7 cut(s) 152, 639, 745, 1113, 1374, 2371, 2796
BpiI GAAGAC 6 cut(s) 32, 353, 702, 2127, 2201, 2649
BpmI CTGGAG 2 cut(s) 821, 2558
Bpu14I TTCGAA 1 cut(s) 1442
BpuEI CTTGAG 2 cut(s) 1070, 1495
BsaAI YACGTR 2 cut(s) 761, 2638
BsaHI GRCGYC 1 cut(s) 564
BsaJI CCNNGG 7 cut(s) 213, 459, 704, 746, 2071, 2622, 2623
BsaWI WCCGGW 1 cut(s) 1513
Bsc4I CCNNNNNNNGG 6 cut(s) 214, 1119, 1832, 2149, 2227, 2735
Bse1I ACTGG 3 cut(s) 940, 1523, 1884
Bse3DI GCAATG 1 cut(s) 1244
BseAI TCCGGA 1 cut(s) 1513
BseBI CCWGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
BseDI CCNNGG 7 cut(s) 213, 459, 704, 746, 2071, 2622, 2623
BseLI CCNNNNNNNGG 6 cut(s) 214, 1119, 1832, 2149, 2227, 2735
BseMI GCAATG 1 cut(s) 1244
BseMII CTCAG 5 cut(s) 1539, 1949, 2114, 2288, 2419
BseNI ACTGG 3 cut(s) 940, 1523, 1884
BseRI GAGGAG 1 cut(s) 2376
BseSI GKGCMC 1 cut(s) 394
BseXI GCAGC 7 cut(s) 415, 1434, 1876, 1879, 2297, 2367, 2632
BseYI CCCAGC 1 cut(s) 4
Bsh1236I CGCG 2 cut(s) 570, 706
BshFI GGCC 4 cut(s) 392, 596, 702, 745
BsiSI CCGG 1 cut(s) 1514
BslI CCNNNNNNNGG 6 cut(s) 214, 1119, 1832, 2149, 2227, 2735
BsmAI GTCTC 3 cut(s) 242, 453, 478
BsmBI CGTCTC 3 cut(s) 242, 453, 478
BsmI GAATGC 4 cut(s) 356, 1681, 2144, 2708
BsnI GGCC 4 cut(s) 392, 596, 702, 745
Bsp119I TTCGAA 1 cut(s) 1442
Bsp120I GGGCCC 1 cut(s) 390
Bsp1286I GDGCHC 2 cut(s) 46, 394
Bsp13I TCCGGA 1 cut(s) 1513
Bsp1407I TGTACA 2 cut(s) 1230, 2247
Bsp19I CCATGG 1 cut(s) 213
BspACI CCGC 8 cut(s) 568, 587, 704, 706, 931, 1650, 2353, 2697
BspANI GGCC 4 cut(s) 392, 596, 702, 745
BspCNI CTCAG 5 cut(s) 1540, 1950, 2113, 2289, 2418
BspEI TCCGGA 1 cut(s) 1513
BspFNI CGCG 2 cut(s) 570, 706
BspHI TCATGA 1 cut(s) 2773
BspLI GGNNCC 4 cut(s) 83, 392, 2363, 2620
BspMAI CTGCAG 1 cut(s) 1796
BspMI ACCTGC 1 cut(s) 2564
BspPI GGATC 8 cut(s) 76, 89, 930, 1464, 1792, 2613, 2626, 2720
BspT104I TTCGAA 1 cut(s) 1442
BspTI CTTAAG 1 cut(s) 1817
BsrDI GCAATG 1 cut(s) 1244
BsrGI TGTACA 2 cut(s) 1230, 2247
BsrI ACTGG 3 cut(s) 940, 1523, 1884
BssECI CCNNGG 7 cut(s) 213, 459, 704, 746, 2071, 2622, 2623
BssNI GRCGYC 1 cut(s) 564
BssT1I CCWWGG 2 cut(s) 213, 746
Bst2UI CCWGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
Bst4CI ACNGT 7 cut(s) 1107, 1230, 1430, 1448, 1607, 1845, 1977
Bst6I CTCTTC 4 cut(s) 104, 810, 1716, 2087
BstACI GRCGYC 1 cut(s) 564
BstAFI CTTAAG 1 cut(s) 1817
BstAUI TGTACA 2 cut(s) 1230, 2247
BstBAI YACGTR 2 cut(s) 761, 2638
BstBI TTCGAA 1 cut(s) 1442
BstC8I GCNNGC 5 cut(s) 568, 614, 704, 806, 2610
BstDEI CTNAG 8 cut(s) 926, 1058, 1118, 1548, 1958, 2100, 2297, 2405
BstDSI CCRYGG 3 cut(s) 213, 459, 704
BstENI CCTNNNNNAGG 1 cut(s) 1117
BstFNI CGCG 2 cut(s) 570, 706
BstHHI GCGC 3 cut(s) 356, 572, 2457
BstMAI GTCTC 3 cut(s) 242, 453, 478
BstMWI GCNNNNNNNGC 4 cut(s) 377, 593, 2463, 2579
BstNI CCWGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
BstNSI RCATGY 6 cut(s) 559, 1048, 1237, 1689, 1919, 2803
BstSCI CCNGG 5 cut(s) 1740, 1780, 2031, 2070, 2622
BstSFI CTRYAG 1 cut(s) 1792
BstSLI GKGCMC 1 cut(s) 394
BstUI CGCG 2 cut(s) 570, 706
BstV1I GCAGC 7 cut(s) 415, 1434, 1876, 1879, 2297, 2367, 2632
BstV2I GAAGAC 6 cut(s) 32, 353, 702, 2127, 2201, 2649
BstX2I RGATCY 6 cut(s) 81, 922, 1469, 1784, 2233, 2618
BstXI CCANNNNNNTGG 1 cut(s) 196
BstYI RGATCY 6 cut(s) 81, 922, 1469, 1784, 2233, 2618
BsuI GTATCC 2 cut(s) 2143, 2732
BsuRI GGCC 4 cut(s) 392, 596, 702, 745
BtgI CCRYGG 3 cut(s) 213, 459, 704
BtsIMutI CAGTG 2 cut(s) 933, 2108
BveI ACCTGC 1 cut(s) 2564
Cac8I GCNNGC 5 cut(s) 568, 614, 704, 806, 2610
CciI TCATGA 1 cut(s) 2773
CfoI GCGC 3 cut(s) 356, 572, 2457
Cfr13I GGNCC 6 cut(s) 390, 391, 595, 701, 1813, 2009
Cfr42I CCGCGG 1 cut(s) 707
CseI GACGC 3 cut(s) 435, 460, 572
Csp6I GTAC 4 cut(s) 295, 1231, 1841, 2248
CspCI CAANNNNNGTGG 2 cut(s) 1890, 1925
CviQI GTAC 4 cut(s) 295, 1231, 1841, 2248
DdeI CTNAG 8 cut(s) 926, 1058, 1118, 1548, 1958, 2100, 2297, 2405
DrdI GACNNNNNNGTC 1 cut(s) 1523
DseDI GACNNNNNNGTC 1 cut(s) 1523
EaeI YGGCCR 1 cut(s) 743
Eam1104I CTCTTC 4 cut(s) 104, 810, 1716, 2087
EarI CTCTTC 4 cut(s) 104, 810, 1716, 2087
Eco130I CCWWGG 2 cut(s) 213, 746
Eco24I GRGCYC 2 cut(s) 46, 394
Eco32I GATATC 5 cut(s) 496, 684, 877, 1132, 1203
Eco47I GGWCC 2 cut(s) 1813, 2009
Eco57I CTGAAG 2 cut(s) 714, 2643
EcoNI CCTNNNNNAGG 1 cut(s) 1117
EcoO109I RGGNCCY 4 cut(s) 390, 391, 595, 1813
EcoRI GAATTC 1 cut(s) 135
EcoRII CCWGG 5 cut(s) 1740, 1780, 2031, 2070, 2622
EcoRV GATATC 5 cut(s) 496, 684, 877, 1132, 1203
EcoT14I CCWWGG 2 cut(s) 213, 746
EcoT22I ATGCAT 2 cut(s) 654, 2749
EcoT38I GRGCYC 2 cut(s) 46, 394
ErhI CCWWGG 2 cut(s) 213, 746
Esp3I CGTCTC 3 cut(s) 242, 453, 478
FauI CCCGC 2 cut(s) 575, 711
FauNDI CATATG 1 cut(s) 2000
FbaI TGATCA 1 cut(s) 2764
Fnu4HI GCNGC 9 cut(s) 429, 931, 1423, 1865, 1868, 2311, 2356, 2646, 2698
FriOI GRGCYC 2 cut(s) 46, 394
Fsp4HI GCNGC 9 cut(s) 429, 931, 1423, 1865, 1868, 2311, 2356, 2646, 2698
GlaI GCGC 3 cut(s) 355, 571, 2456
GluI GCNGC 9 cut(s) 429, 931, 1423, 1865, 1868, 2311, 2356, 2646, 2698
GsaI CCCAGC 1 cut(s) 8
GsuI CTGGAG 2 cut(s) 821, 2558
HaeIII GGCC 4 cut(s) 392, 596, 702, 745
HapII CCGG 1 cut(s) 1514
HgaI GACGC 3 cut(s) 435, 460, 572
HhaI GCGC 3 cut(s) 356, 572, 2457
Hin1I GRCGYC 1 cut(s) 564
Hin6I GCGC 3 cut(s) 354, 570, 2455
HinP1I GCGC 3 cut(s) 354, 570, 2455
HincII GTYRAC 2 cut(s) 1110, 1528
HindII GTYRAC 2 cut(s) 1110, 1528
HindIII AAGCTT 1 cut(s) 984
HpaII CCGG 1 cut(s) 1514
HphI GGTGA 6 cut(s) 413, 601, 727, 1664, 1781, 2683
Hpy166II GTNNAC 3 cut(s) 1110, 1402, 1528
Hpy8I GTNNAC 3 cut(s) 1110, 1402, 1528
HpyCH4III ACNGT 7 cut(s) 1107, 1230, 1430, 1448, 1607, 1845, 1977
HpyCH4IV ACGT 5 cut(s) 235, 636, 760, 2497, 2637
HpyF10VI GCNNNNNNNGC 4 cut(s) 377, 593, 2463, 2579
HpyF3I CTNAG 8 cut(s) 926, 1058, 1118, 1548, 1958, 2100, 2297, 2405
HpySE526I ACGT 5 cut(s) 235, 636, 760, 2497, 2637
Hsp92I GRCGYC 1 cut(s) 564
HspAI GCGC 3 cut(s) 354, 570, 2455
Kpn2I TCCGGA 1 cut(s) 1513
Ksp22I TGATCA 1 cut(s) 2764
KspI CCGCGG 1 cut(s) 707
LmnI GCTCC 5 cut(s) 267, 2020, 2389, 2539, 2547
Lsp1109I GCAGC 7 cut(s) 415, 1434, 1876, 1879, 2297, 2367, 2632
LweI GCATC 7 cut(s) 152, 639, 745, 1113, 1374, 2371, 2796
MaeII ACGT 5 cut(s) 235, 636, 760, 2497, 2637
MaeIII GTNAC 6 cut(s) 1565, 1583, 1614, 1773, 1990, 2780
MfeI CAATTG 2 cut(s) 501, 2114
MflI RGATCY 6 cut(s) 81, 922, 1469, 1784, 2233, 2618
MhlI GDGCHC 2 cut(s) 46, 394
MlsI TGGCCA 1 cut(s) 745
MluNI TGGCCA 1 cut(s) 745
MlyI GAGTC 5 cut(s) 599, 617, 924, 1907, 2308
MmeI TCCRAC 1 cut(s) 576
Mox20I TGGCCA 1 cut(s) 745
Mph1103I ATGCAT 2 cut(s) 654, 2749
MroI TCCGGA 1 cut(s) 1513
MroXI GAANNNNTTC 1 cut(s) 2235
MscI TGGCCA 1 cut(s) 745
MseI TTAA 8 cut(s) 600, 869, 911, 1041, 1328, 1482, 1580, 1818
MslI CAYNNNNRTG 1 cut(s) 1592
Msp20I TGGCCA 1 cut(s) 745
MspA1I CMGCKG 3 cut(s) 587, 706, 2697
MspCI CTTAAG 1 cut(s) 1817
MspI CCGG 1 cut(s) 1514
MspR9I CCNGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
MunI CAATTG 2 cut(s) 501, 2114
Mva1269I GAATGC 4 cut(s) 356, 1681, 2144, 2708
MvaI CCWGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
MvnI CGCG 2 cut(s) 570, 706
MwoI GCNNNNNNNGC 4 cut(s) 377, 593, 2463, 2579
NcoI CCATGG 1 cut(s) 213
NdeI CATATG 1 cut(s) 2000
NlaIV GGNNCC 4 cut(s) 83, 392, 2363, 2620
NsiI ATGCAT 2 cut(s) 654, 2749
NspI RCATGY 6 cut(s) 559, 1048, 1237, 1689, 1919, 2803
NspV TTCGAA 1 cut(s) 1442
PagI TCATGA 1 cut(s) 2773
PasI CCCWGGG 1 cut(s) 2623
PciI ACATGT 2 cut(s) 1685, 1915
PctI GAATGC 4 cut(s) 356, 1681, 2144, 2708
PdmI GAANNNNTTC 1 cut(s) 2235
PfeI GAWTC 5 cut(s) 260, 548, 1054, 1149, 1506
PkrI GCNGC 9 cut(s) 430, 932, 1424, 1866, 1869, 2312, 2357, 2647, 2699
PleI GAGTC 5 cut(s) 599, 617, 923, 1906, 2307
PpsI GAGTC 5 cut(s) 599, 617, 923, 1906, 2307
Ppu21I YACGTR 2 cut(s) 761, 2638
PpuMI RGGWCCY 1 cut(s) 1813
PscI ACATGT 2 cut(s) 1685, 1915
Psp5II RGGWCCY 1 cut(s) 1813
Psp6I CCWGG 5 cut(s) 1740, 1780, 2031, 2070, 2622
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 5 cut(s) 1740, 1780, 2031, 2070, 2622
PspN4I GGNNCC 4 cut(s) 83, 392, 2363, 2620
PspOMI GGGCCC 1 cut(s) 390
PspPI GGNCC 6 cut(s) 390, 391, 595, 701, 1813, 2009
PspPPI RGGWCCY 1 cut(s) 1813
PsrI GAACNNNNNNTAC 2 cut(s) 1480, 1512
PstI CTGCAG 1 cut(s) 1796
PsuI RGATCY 6 cut(s) 81, 922, 1469, 1784, 2233, 2618
RsaI GTAC 4 cut(s) 296, 1232, 1842, 2249
RsaNI GTAC 4 cut(s) 295, 1231, 1841, 2248
RseI CAYNNNNRTG 1 cut(s) 1592
SacII CCGCGG 1 cut(s) 707
SaqAI TTAA 8 cut(s) 600, 869, 911, 1041, 1328, 1482, 1580, 1818
SatI GCNGC 9 cut(s) 429, 931, 1423, 1865, 1868, 2311, 2356, 2646, 2698
Sau96I GGNCC 6 cut(s) 390, 391, 595, 701, 1813, 2009
SchI GAGTC 5 cut(s) 599, 617, 924, 1907, 2308
ScrFI CCNGG 5 cut(s) 1742, 1782, 2033, 2072, 2624
SduI GDGCHC 2 cut(s) 46, 394
SfaNI GCATC 7 cut(s) 152, 639, 745, 1113, 1374, 2371, 2796
SfcI CTRYAG 1 cut(s) 1792
Sfr303I CCGCGG 1 cut(s) 707
SfuI TTCGAA 1 cut(s) 1442
SgrBI CCGCGG 1 cut(s) 707
SinI GGWCC 2 cut(s) 1813, 2009
SmiMI CAYNNNNRTG 1 cut(s) 1592
SmlI CTYRAG 4 cut(s) 17, 1049, 1474, 1817
SmoI CTYRAG 4 cut(s) 17, 1049, 1474, 1817
SsiI CCGC 8 cut(s) 568, 587, 704, 706, 931, 1650, 2353, 2697
SspI AATATT 2 cut(s) 678, 1294
StyD4I CCNGG 5 cut(s) 1740, 1780, 2031, 2070, 2622
StyI CCWWGG 2 cut(s) 213, 746
TaaI ACNGT 7 cut(s) 1107, 1230, 1430, 1448, 1607, 1845, 1977
TaiI ACGT 5 cut(s) 238, 639, 763, 2500, 2640
TaqI TCGA 4 cut(s) 397, 433, 1442, 2714
TatI WGTACW 3 cut(s) 1230, 1840, 2247
TauI GCSGC 2 cut(s) 933, 2700
TfiI GAWTC 5 cut(s) 260, 548, 1054, 1149, 1506
Tru1I TTAA 8 cut(s) 600, 869, 911, 1041, 1328, 1482, 1580, 1818
Tru9I TTAA 8 cut(s) 600, 869, 911, 1041, 1328, 1482, 1580, 1818
TscAI CASTG 2 cut(s) 940, 2108
TseI GCWGC 7 cut(s) 428, 1422, 1864, 1867, 2310, 2355, 2645
TspDTI ATGAA 9 cut(s) 803, 855, 933, 1320, 1688, 2274, 2413, 2604, 2693
TspRI CASTG 2 cut(s) 940, 2108
Vha464I CTTAAG 1 cut(s) 1817
VpaK11BI GGWCC 2 cut(s) 1813, 2009
XagI CCTNNNNNAGG 1 cut(s) 1117
XapI RAATTY 5 cut(s) 135, 580, 798, 1714, 2690
XbaI TCTAGA 3 cut(s) 626, 1693, 1981
XceI RCATGY 6 cut(s) 559, 1048, 1237, 1689, 1919, 2803
XcmI CCANNNNNNNNNTGG 2 cut(s) 193, 2620
XmnI GAANNNNTTC 1 cut(s) 2235
Zsp2I ATGCAT 2 cut(s) 654, 2749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.