RchiOBHm_Chr5g0080241

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000085
Physical Location & Seq
Reverse (-)
86076798 .. 86090172
13375 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35457

Sequence Viewer

Length: 7692 bp
ATGGCCTTGGTCGCTCGAAGATCTGATCCGAAGGAAGAGATGCATTCGATGGACTGGTTCTCTCGAAGATCTGATGCATTCAATTGGTTTCCGATGCATCAGCCTTCATCAGTTGTTGAGTGGGAGTATGACGTGTATTTGAGTTTCAGGGCTGTAGATACTCAATGGGGTTTTACATTGCATTTATACGATTGGCTGCAAAAGGGAGGAATCACAACATTCATGGATGATTCAGATTTTGAAGCAGGGGATGTTATTGCTCCCGCTCTCCTAAAGGCAATTGAAGGATCAAGTTTCGCAATTGTTGTTCTGTCCAAAAATTATGCTTCTTCTGCTTGGTGTTTGGATGAACTTACAGCGATTTGTCAGTCCATGGAGGAAATTCTTCCAGTTTTTTATAAGGTCAAGCCTAGTGATGTAAGAAATCAAAAGGGGAGTTTTCAAGATGCTTTCGCCAAGCATGAAAGCTCTGGGCGATACGGATCAGAGAAGGTGAAGCAGTGGAGAGATGCTTTAACAAAAGTGGCCAATTTGTCTGGGTGGGATACACGGGATTACGACACTGAGAAGGGACTTGTCCAAGACATTGTGGAATCTGTGTACAGTAAACTACAACCTGTTGTGGTATCCCAGAGGCCTGACTTGACAAAAATTCTAGGCACATTGGCGGGGCGGAGTGGGTATTCTACTGTCACTACTTGGGAAAAGGGTGATTTTCTCGGCAACGGCTCTTTCGGGTCTGTGTATGAAGGAATTTATAACGGATGCTTCTTTGCTGTCAAGGAAGTTTCCTTGCTTGATCAAGGAAGCCTGGGGAGGCAAAGAGTTTCTCAACTTGAACAGGAGATTGCTCTTCTGAGTCAATTTGAACATGAGAACATAGTTCAGTATTATGGCACAGAAAAGGATGAATCAAAGCTCTATATCTATATGGAACTTGTAACCAAAGGCTCCCTTCAAAAGCTATATCAGATTCACCATCTTACAGATTCGCATGTCTCTGTATACACTAGACAGATCTTGCAAGGTCTGAAGTATCTTCACGACCGAAAAGTGATTCACAGGGACATTAGATGTGCAAATCTTTTGGTGCATGCTAATGGATCTGTGAAGCTTGCAGACTTTGGATTGTCAAAGACTATCAAAATGAATGACATAAAATCTTGCCAAGGAACTGCATACTGGATGGCACCTGAGGTTGTTAATCATAAGAGTCAAGGTTATGGCCTTCCAGCTGATATATGGAGTCTTGGATGTACTGTGTTGGAGATGTTAACTGGGATGGTTCCATACTCTAATCTCGAATGGATGCAGGCATTATGGAAAATTGGAAAGGGGGACCCCCCTCTGGTTCCTGATTCTCTTTCAAGAGAGGCACAACATTTCATCCATCTATGCTTAAAAGTTAAGCCAGATGATCGTCCCACTGCTGCTCAGCTTTTAGAACATCCATTTGTAAATAAGCCCCTTCCTCCCACGTCTTCTGGATTAGTATCTCCTTACAATCACTACGGGCACCGTTATGCCTCGGTTCCTCGAAAAACTGCTGCATCTCTTCCTTCATCAGTTGAATCATCATCATCGTCAGCTCGTCCGTGGATCTATGATGTGTTTTTGAGTTGCAGAGGTGAAGATGCTGTAAGGGGTTTTACATTACATTTATACGATCGGCTGCAAAAGAGAGGAATCACAACATTCATGGATGATCTAGATCTTCAAGTAGGGGATGATGTTTCTCCCACTCTCCTAGAGGCAATTGAAGGATCAAGGTTCACAATTGTTGTTCTGTCTCAAAATTATGCTTATTCTGCTTGGTGTTTGGATGAACTTACAAAGATTTGTGAGTTCATGGAGAGCGCCTACAGAATTCTTCCAGTTTTTTATGATGTCGACCCTAATGATGTAAGAAATCAAAAGGGGAGTTTTCAAGATGCTTTCACCAAGCATGAAAGGTCTGGCCGATACGAACCAAAGAAGGTCCAGCTGTGGAGAGATGCTTTAAGAAGAACGGCCAATTTGACCGGGTGGGATACAAGGAATTACATCACTGAGAGTAAATGTGTCGAAGACATTGTGGAATATGTGTGGAGGAAAGTACAATCTGTTTTGGAAGTCAAAAAAGTACAACCTATTGAAATCACTACGGGAGGTTTTGAAGTATTTGAAGCAACAAGAAAAGCCATGGATGAGGTTATGGAGGTGCTAAAAGATGACGAGGTCACTGCCATTGGTGTCTACGGCATGGGAGGTGTCGGCAAGACAACCTTGGTAAAACATATTGCTGAACAATCCTGCAAAAATGGGACTTTTAATCATGTGATTATGGCTGTTGTATCCCAACGCCCCAACTTCCAAAGAATTCAACACACATTGATAGAGCTGTTGGGCATTAAATTGGAGGAATCAGAATTTGGAAGAGCTGCTACATTGCATAAGGACATGTTGAGAAGAGAAAAACTCCTTATTATCTTGGACGATGTTTGGGAGAGCATAGAGTTGTCAAAGATAGGGATTCCCAGCTACATGGAGCTTCAAAAGTGCAAGTCCAAAGTTCTACTCACTACAAGGATGATGAATATCTGTCATGTCATGAGATGCCAAAGCATGATCAACCTCAGTATCCTATCAAAAGATGATTCTTGGACCTTGTTTGTGAGAAATGCAGGGAGGTCTTTTGAATCGACCACTTTCGAGGGTGTGGCAAAGAATGTAGCTGGAGAATGTGCTGGTCTGCCAATTGCATTGAGAGCAGTTGCAAGGGCACTCGGAGATAAGAATCTGCAGGAATGGGAAAAAGCAGCTCAACAACTACAGAAGTCGCAATCTGCCAACTCTTTACATGAAGATGATGCATTCAGATGTATAAAATTAAGCTATGATTACTTGAAAGATGAAGATTCCAAGTCATGCTTCTTGCTTTGTTGCCTATTTCCTGAAGGCTATGACATCCCAACCGGAGACTTGTTCAAGTATGCAACTGGGAAAGGATTGTTTCGAGATGCTGACACAATCGAAGAAGCCAGAGGAACAGCAGATTCAGTGGTCATGTACCTGAAAGATTCTAGCTTGCTTTTGGAAAGTGAAAAAAATGGATGCGTAAGGATGCATGATGTCATCCGGGCTACAGCCATCATGATTGCAAATTCTGAAGATGGGCATGGATTTTTGGTAATAGCTGGCTGTGGTTTAAAAGAGTGGCCACGTCAAGGGCATGAAGGCTACTCTGCAATCTCATTAATGAAAAATGATATCCAGAAGCTACCCGGAGAGCTGGTATGTCCAAAACTCCAGATTTTATTACTACAGCAGAATGCTGATTTAAATGAGATCCCAGAAACTTTTTTCCAAAGTCCTAATGAATTAAGGGTCTTAGATCTTAGCCTCACCAACATTACTGCACTTCCTCAATCATTCAGTCTCCTAATGAACCTCCAAGCTTTATATCTAGATTTTTGCCAGAGACTGATTGACTTTTCTGTACTCGGAAAACTAAAGAAGCTTGAGATTCTTAGTTTGAGAGGAAATGTTTTGAAAGAATTGTCGAGAGAAATAGGGAATCTGATCAATCTAAGGATGCTGGACATTACTGACGGAATTATTAGCAAAATTCCATCGAAAGTGATATCACAGTTGCATAGATTAGAAGAACTGTACATGCCATTTCGATTTGGGAATTGGGTCAGGAAGGTTGAAGGAGAAGGAGAAGAAACTGATATTGGCTTTGGTGAGGTAACTGGCTTATCATGTCTAAATATTTTGAAGGTTTCCCTATCTGCAAAATGCATACCTGAAAAGCTTATGTTTCGTCCCAATTGGTTGTTCTTTGATATTTGTATTAGAGGAGACACAAGCAGCAGAGACATTACGAGAGACATAAGTAATCAAGGCTCTCAACACAGTCATAAAGATTCAAGATCCTTGAGTCTTGACACAAGAATTAGTGCCTTACCAGCTTGGTTTGTCCGTGAGGTAACAGTCAAAACAGAGAAGCTACTGTATGTAAAGTGCAAATGGTTGAATAACATTCTTGTTGAATATCACCATGGGAGGTTACATATGCTGAAACATCTCTCTGTTATTGGTCCCAGTGAGAGCTTGGAAGAGCTGATGAATGCTATAACATGGGTTCCAGTTAAACCCGTGTTCGAGAACTTGGAAGAGTTGCATTTGGAGTGTGTGACTTCTTTGAAAGAGTTATGTGTTGGAAAATTACCACCTGGGTCTCTATACAATCTGAAGTTATTGAAGGTCCATTATTGTCCTAACTTGGGGAATATTCTTTTACCGTCAAAATTGTTACATAGATTGCCAAATCTGGAGAACATAATCTGTAGGGATATGTCTAGACTGGAACATGTGTTTGGATGTCAAGGGTTTGAGCCAGAGCAATCAAAACTGAGAGAGATGACCTTTATCAATCTACCTGCTATAAGAAACATATGTAACGGTCCAGCTCCACGTGCAATGTTCCAAGCTCTTAAAAGTTTGTTCATTTATCATTGCAACTTTCTAGGATGTCTCTTCTCGTTTGATACTGCTCAAGTTCTTTTTCAATTGGAAGACCTTTTTGTAGACAGTTGCCCTTTATTGGAAAGACTAATTGAAGTACGCACGGAAAGAGTGAACAACAAGAAGATCATTCTTCCAAAATTGAAGAACTTGGGTTTAGAGAAACTTCCTATATTGTACAGTGGAGGTGCTACTATTGATATCGATTGTCCTTCCTTGGAACACTTGTATGTGAAGGAGTGCCCCCAGTTTACAGCCTCTGCTTCTGACTTCCAGAGCAAGAACCAAGTCCAAGTCAACGATAAATTACATTACTTTGGTCTACTTGGCAGAAGGACTGAAAGACAACACATTGAAGCCATTGCAGAATCTGTGTTCAGTACATTACGACCTATTGAAACTGAGTTTACAATGCCCATGGGAGATTTTCAAGCATTTGAAGCAACAAGACAGGCCATGAATAAGGTTATGAAGGCACTAGAAGCTGATGAGGTCACAGCCATTGGGGTCTACGGAATGGGAGGAGTTGGAAAATCAACCATGGTTGAACGTGTTTGTGCAGAAGTTCGGGATAATGGGATGTTTCATCAGGTGATTTCGGCTGTTGTATCCCAAAACCCTGACTTGAGAAAAATTCAAGGCACATTGGCAGATATGTTGGGCTTTATATTTGAGGAGGAAACAGAAATTGGAAGAGCTCGTAGATTGATGCAGAGGATAAGGAGAGGAAATAGGATCCTTGTAATCTTGGACAACATTTGGGAGAGAATAGATTTGTTAAACATAGGAATTCCCAGCTACTACGAGCTTCAAAGATGCAATTCCAAAGTCCTACTCATCACAAGGACAGAAAATGTCTGTCATGCCATGGAGTGCCAATCAAACATTTCTCTTGATGTCTTATCAGAAGAAGATTCTTGGACCTTATTTGTGAACAAAGCAAGAATGTCTTTTGAATCGACCAATTTGTGTGATGTTGCAAAGAAGGTAGCTAGAGCATGTGCTGGTCTTCCAGTTGCGTTGATAGCAGTTGCGAAGGCACTTGGTGATAAGTGTTTGGATGACTGGAAGGAAGCGGCTAGACGACTAGAGGCTTCGCAACCTGCCAACCTTGAAGATGGGAAAGTTGTCTTCAATTGTATAAAATTAAGCTATGATTTCTTGATATCTGATGATGCCAGGTCATTCTTCTTGCTTTGTTGCCTCTTCCCAGAAGACTATGATATCCAAATTGAAGAGTTGTTAAAGTATGGGATGGGGAAAGGATTGTTTCAAGATTCCTGCACAATGCAAGATGCCAGAGTAACTGCACATTTGGTGGTCAAGTACCTTAAAGATTGTAGCTTGCTTTTGGAAACTGAACAGGACGGATGTGTAAAGATGCATGATGTCATTCGGGATGTGGCCATAAGGATTTCGTGGTCTGAGGATGGCCCACTGTTTTTTGTACAAGCTGGTTGTCAATTAAAGGAATGGCCAAGTATTAGTGCACATGAAGGCTACTCTGCTATTTCACTAATTATGAGTAAAATTTGCATGCTTCCTGAAGAGTTGGTATGTCCGAAACTCCTTATTTTGTTTTTGCAAAGTAATGTTTGGTTGAATGAGATCCCAGAATATTTCTTTCAAAGTCTGAATGTGTTGAGGGTATTAGATCTAAGCCGAACCAGAATTTCTTTTCTACCCACATCATTCAATACCTTGATCAACCTCCAGACCTTGTATCTAGATGGTTGCTTGTCAACCATAGAAAACATATCCATACTCGGAAAATTGAAAAAACTTGAGATTCTTAGTATGAGAGAACTTCCTCTTGTGGAACTGCCAAAAGAAATCGGAGATTTGAGCCATCTAAGGATGTTAGACATCACTGGTGATTATGTTGATAATGTTCCATCTGAAGTGATATGCAACCTTAATTTGTTAGAGGAACTATACATGCAGTGTAATTTTGCAGACTGGGGGAGTAAAGTTGAGGGAGCAGGAGAAGAAAATATTGTTGCGTTTGATGAGTTAACTGGCTTGTCATGTCTAAATGTTTTGAAGGTTTTCATATCTGATGCTAAATGTTTGCCTAAAGATGTGGAGGTTGAACCAAATTGGGTAAACTTTGATATTTGTATCAGCAGAGACCCATCCATCAGAAAAGTGTCCTTGGTTTCAAGTTCTTCACCCGCTTTTACAAGAGCCTTGACTCTTGATACAACCATCAATGCCTTACCAGGTTGGTTTATCAATGCGGTGACAATGAAAGCAGAGAAACTGCAGTACATAATGTGTTGGGGATTAGATAACATTCTTGTGGAATATGACTCTGGGAGATTACATGCACTGAAGTATTTATCTGTTATTGGGCCCAATGAGAACTTGAAAATATTGATGAACACAGTAACACGCTTTTGGAATGAACCAGTGTTTCAGAACTTGGAAGAGTTGCATCTCGTTCAAGTGGATTGCCTGAAGGAGTTATGTGCTGGTGAATTGCCACCTGGGTCTCTATGCAATCTCAGGTTACTGAAGGTGAAACATTGCTATGAATTGGTGGATGCACTCCTACCGTCACAGTTGCTGCAGAGATTACAAAATCTGGAAGAACTGATTTGTGAAGAGATAGATGAATTGGAATATGTTTTTGGATGTGAAGGGCTTGAGCCAGAACAAATGATATTGACACAATTGATGGAAATGAGATTGGAGAATCTAGGGAAACTAATAAAGATATGGAATGGTCCTGCTCCTTGTGCAATCTTCCAGAATCTTCAGAGTTTGGTAGTTTCCAGGTGCTTTGAACTGGAAAATCTCTTCACAGCTGATGTAGCTCAACGTCTTTTGCACTTGGAAGATCTTTCAGTGGAGCTTTGCCCAATGTTGGACAACATTATTGAAGCAAGTAAGGACACAGTGGATAACAAGATTGTTTTTCCAGAACTGAAGAACTTAACTTTGATAAAGCTTCCACAACTCACAAGGTTCTGCGGCAGTACAGGCAGTGCTATTAAGTGCCCTTTACTGGAATACTTGTATGTGGAGAGGTGCCCCCAGTTTTCAACACCTGACTTCCATAGCAGGAACAAAGTCGAACCCAAATATCCACAACGTTTGGACATTGTATTGAGAAGGGCCAGAGCAGAGAAAAGAAGAAAAATCAAATTCACTGAGGTCGTCCAAGAAGACAGTAAGTAG

Protein Analysis

2563

Amino Acids

290.6

Weight (kDa)

5.63

Isoelectric Point (pI)

45.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 43 - 211 2.9e-46 TIR domain
TIR_2 PF13676 45 - 137 8.3e-14 TIR domain
Pkinase PF00069 235 - 486 1.2e-65 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 238 - 482 1.5e-48 Protein tyrosine and serine/threonine kinase
TIR PF01582 535 - 705 3.1e-47 TIR domain
TIR_2 PF13676 537 - 632 2.7e-16 TIR domain
NB-ARC PF00931 726 - 888 3.2e-33 NB-ARC domain
LRR_8 PF13855 1094 - 1153 1.1e-08 Leucine rich repeat
LRR_14 PF23598 1156 - 1220 2.2e-07 Leucine-rich repeat region
LRR_RPS2 PF23247 1385 - 1527 1.8e-21 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1484 - 1588 3.2e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
NB-ARC PF00931 1654 - 1818 1.1e-27 NB-ARC domain
LRR_8 PF13855 2024 - 2082 1e-06 Leucine rich repeat
LRR_14 PF23598 2077 - 2152 1.9e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 2312 - 2457 1.7e-28 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 399, 759
Acc36I ACCTGC 2 cut(s) 4432, 5620
AccB1I GGYRCC 3 cut(s) 1189, 1515, 7542
AccBSI CCGCTC 1 cut(s) 266
AccI GTMKAC 6 cut(s) 1005, 1890, 2235, 4572, 4831, 5019
AciI CCGC 7 cut(s) 264, 668, 673, 5585, 6684, 6749, 7485
AclI AACGTT 1 cut(s) 7606
AcoI YGGCCR 6 cut(s) 525, 1957, 2010, 3197, 5913, 5984
AcvI CACGTG 1 cut(s) 4460
AdeI CACNNNGTG 1 cut(s) 5555
AfiI CCNNNNNNNGG 6 cut(s) 1348, 3206, 4268, 4588, 7378, 7519
AflIII ACRYGT 4 cut(s) 132, 2439, 4354, 5059
AjiI CACGTC 3 cut(s) 133, 1479, 3203
AjnI CCWGG 6 cut(s) 810, 4216, 5687, 6730, 6997, 7286
Alw21I GWGCWC 2 cut(s) 5209, 6001
Alw44I GTGCAC 1 cut(s) 5997
AlwNI CAGNNNCTG 4 cut(s) 3463, 4769, 4880, 7078
ApaI GGGCCC 1 cut(s) 6867
ApaLI GTGCAC 1 cut(s) 5997
ApeKI GCWGC 8 cut(s) 196, 1430, 1547, 1672, 2420, 2798, 3852, 7078
AseI ATTAAT 1 cut(s) 3236
Asp700I GAANNNNTTC 2 cut(s) 384, 6557
AspLEI GCGC 1 cut(s) 1859
AsuC2I CCSGG 3 cut(s) 2023, 3119, 3264
AvaII GGWCC 8 cut(s) 1339, 1978, 2643, 4082, 4249, 4448, 5430, 7238
AxyI CCTNAGG 1 cut(s) 1194
BaeGI GKGCMC 7 cut(s) 1518, 2764, 4754, 6001, 6867, 7514, 7547
BaeI ACNNNNGTAYC 2 cut(s) 2602, 2635
BalI TGGCCA 4 cut(s) 527, 3199, 5915, 5986
BamHI GGATCC 1 cut(s) 5244
BanI GGYRCC 3 cut(s) 1189, 1515, 7542
BanII GRGCYC 2 cut(s) 5209, 6867
BarI GAAGNNNNNNTAC 2 cut(s) 2407, 2439
BbrPI CACGTG 1 cut(s) 4460
BbsI GAAGAC 7 cut(s) 1473, 2073, 4566, 5510, 5632, 5730, 7686
Bbv12I GWGCWC 2 cut(s) 5209, 6001
BbvI GCAGC 8 cut(s) 183, 1417, 1534, 1659, 2407, 2810, 3864, 7065
BceAI ACGGC 3 cut(s) 742, 2025, 2254
BcgI CGANNNNNNTGC 2 cut(s) 2204, 2238
BciT130I CCWGG 6 cut(s) 812, 4218, 5689, 6732, 6999, 7288
BciVI GTATCC 6 cut(s) 538, 637, 2023, 2344, 2630, 5128
BclI TGATCA 4 cut(s) 799, 2607, 3561, 6213
BcnI CCSGG 3 cut(s) 2023, 3119, 3264
BfmI CTRYAG 9 cut(s) 153, 1861, 2780, 2810, 3123, 3302, 4330, 6773, 7079
BfoI RGCGCY 1 cut(s) 1860
BfuAI ACCTGC 2 cut(s) 4432, 5620
BfuI GTATCC 6 cut(s) 538, 637, 2023, 2344, 2630, 5128
BglII AGATCT 7 cut(s) 20, 68, 1017, 1711, 3373, 6163, 7351
BlpI GCTNAGC 1 cut(s) 1434
Bme1390I CCNGG 9 cut(s) 812, 2023, 3119, 3264, 4218, 5689, 6732, 6999, 7288
Bme18I GGWCC 8 cut(s) 1339, 1978, 2643, 4082, 4249, 4448, 5430, 7238
BmgBI CACGTC 3 cut(s) 133, 1479, 3203
BmrFI CCNGG 9 cut(s) 812, 2023, 3119, 3264, 4218, 5689, 6732, 6999, 7288
BmrI ACTGGG 6 cut(s) 1287, 2988, 4080, 4750, 6478, 7543
BmuI ACTGGG 6 cut(s) 1287, 2988, 4080, 4750, 6478, 7543
BpiI GAAGAC 7 cut(s) 1473, 2073, 4566, 5510, 5632, 5730, 7686
BplI GAGNNNNNCTC 2 cut(s) 2442, 2474
BpmI CTGGAG 4 cut(s) 2736, 3272, 4337, 6206
Bpu1102I GCTNAGC 1 cut(s) 1434
BpuEI CTTGAG 6 cut(s) 3521, 3940, 4524, 5155, 6314, 7178
BpuMI CCSGG 3 cut(s) 2023, 3119, 3264
Bsa29I ATCGAT 1 cut(s) 4713
BsaAI YACGTR 1 cut(s) 4460
BsaBI GATNNNNATC 5 cut(s) 481, 1492, 1710, 2576, 2775
BsaI GGTCTC 3 cut(s) 4227, 6633, 7008
BsaWI WCCGGW 1 cut(s) 2954
BsaXI ACNNNNNCTCC 2 cut(s) 3258, 3288
Bsc4I CCNNNNNNNGG 6 cut(s) 1348, 3206, 4268, 4588, 7378, 7519
Bse21I CCTNAGG 1 cut(s) 1194
Bse3DI GCAATG 6 cut(s) 176, 2426, 4470, 4498, 4869, 7036
Bse8I GATNNNNATC 5 cut(s) 481, 1492, 1710, 2576, 2775
BseBI CCWGG 6 cut(s) 812, 4218, 5689, 6732, 6999, 7288
BseCI ATCGAT 1 cut(s) 4713
BseJI GATNNNNATC 5 cut(s) 481, 1492, 1710, 2576, 2775
BseLI CCNNNNNNNGG 6 cut(s) 1348, 3206, 4268, 4588, 7378, 7519
BseMI GCAATG 6 cut(s) 176, 2426, 4470, 4498, 4869, 7036
BseRI GAGGAG 3 cut(s) 3855, 5046, 5198
BseSI GKGCMC 7 cut(s) 1518, 2764, 4754, 6001, 6867, 7514, 7547
BseXI GCAGC 8 cut(s) 183, 1417, 1534, 1659, 2407, 2810, 3864, 7065
BseYI CCCAGC 2 cut(s) 2516, 5303
BsgI GTGCAG 4 cut(s) 3381, 5088, 5776, 5802
Bsh1285I CGRYCG 2 cut(s) 1048, 1669
BshNI GGYRCC 3 cut(s) 1189, 1515, 7542
BshVI ATCGAT 1 cut(s) 4713
BsiEI CGRYCG 2 cut(s) 1048, 1669
BsiHKAI GWGCWC 2 cut(s) 5209, 6001
BsiSI CCGG 4 cut(s) 2022, 2955, 3118, 3264
BslFI GGGAC 7 cut(s) 585, 1079, 1352, 1407, 2317, 3792, 4068
BslI CCNNNNNNNGG 6 cut(s) 1348, 3206, 4268, 4588, 7378, 7519
BsmFI GGGAC 7 cut(s) 585, 1079, 1352, 1407, 2317, 3792, 4068
BsmI GAATGC 5 cut(s) 43, 77, 2852, 3316, 4117
Bso31I GGTCTC 3 cut(s) 4227, 6633, 7008
Bsp120I GGGCCC 1 cut(s) 6863
Bsp1286I GDGCHC 8 cut(s) 1518, 2764, 4754, 5209, 6001, 6867, 7514, 7547
Bsp1407I TGTACA 4 cut(s) 600, 3651, 4686, 5956
Bsp1720I GCTNAGC 1 cut(s) 1434
Bsp19I CCATGG 6 cut(s) 372, 2181, 4042, 4926, 5049, 5376
BspACI CCGC 7 cut(s) 264, 668, 673, 5585, 6684, 6749, 7485
BspDI ATCGAT 1 cut(s) 4713
BspHI TCATGA 2 cut(s) 2589, 3132
BspMAI CTGCAG 3 cut(s) 2784, 6777, 7083
BspMI ACCTGC 2 cut(s) 4432, 5620
BspQI GCTCTTC 4 cut(s) 858, 2410, 4095, 5197
BspT107I GGYRCC 3 cut(s) 1189, 1515, 7542
BspTNI GGTCTC 3 cut(s) 4227, 6633, 7008
BsrBI CCGCTC 1 cut(s) 266
BsrDI GCAATG 6 cut(s) 176, 2426, 4470, 4498, 4869, 7036
BsrGI TGTACA 4 cut(s) 600, 3651, 4686, 5956
BssNAI GTATAC 1 cut(s) 1006
Bst1107I GTATAC 1 cut(s) 1006
Bst2UI CCWGG 6 cut(s) 812, 4218, 5689, 6732, 6999, 7288
BstAUI TGTACA 4 cut(s) 600, 3651, 4686, 5956
BstBAI YACGTR 1 cut(s) 4460
BstC8I GCNNGC 7 cut(s) 1095, 1116, 1314, 3068, 3178, 5855, 6047
BstDSI CCRYGG 7 cut(s) 372, 1595, 2181, 4042, 4926, 5049, 5376
BstH2I RGCGCY 1 cut(s) 1860
BstHHI GCGC 1 cut(s) 1859
BstMCI CGRYCG 2 cut(s) 1048, 1669
BstNI CCWGG 6 cut(s) 812, 4218, 5689, 6732, 6999, 7288
BstNSI RCATGY 9 cut(s) 998, 1097, 2443, 3658, 4358, 5511, 6049, 6451, 6839
BstSCI CCNGG 9 cut(s) 810, 2021, 3117, 3262, 4216, 5687, 6730, 6997, 7286
BstSFI CTRYAG 9 cut(s) 153, 1861, 2780, 2810, 3123, 3302, 4330, 6773, 7079
BstSLI GKGCMC 7 cut(s) 1518, 2764, 4754, 6001, 6867, 7514, 7547
BstV1I GCAGC 8 cut(s) 183, 1417, 1534, 1659, 2407, 2810, 3864, 7065
BstV2I GAAGAC 7 cut(s) 1473, 2073, 4566, 5510, 5632, 5730, 7686
BstXI CCANNNNNNTGG 1 cut(s) 2524
BstZ17I GTATAC 1 cut(s) 1006
Bsu15I ATCGAT 1 cut(s) 4713
Bsu36I CCTNAGG 1 cut(s) 1194
BsuI GTATCC 6 cut(s) 538, 637, 2023, 2344, 2630, 5128
BsuTUI ATCGAT 1 cut(s) 4713
BtgI CCRYGG 7 cut(s) 372, 1595, 2181, 4042, 4926, 5049, 5376
BtrI CACGTC 3 cut(s) 133, 1479, 3203
BtsI GCAGTG 5 cut(s) 506, 1425, 2220, 6458, 7504
BveI ACCTGC 2 cut(s) 4432, 5620
Cac8I GCNNGC 7 cut(s) 1095, 1116, 1314, 3068, 3178, 5855, 6047
CaiI CAGNNNCTG 4 cut(s) 3463, 4769, 4880, 7078
CciI TCATGA 2 cut(s) 2589, 3132
CfoI GCGC 1 cut(s) 1859
ClaI ATCGAT 1 cut(s) 4713
CsiI ACCWGGT 1 cut(s) 6730
CspCI CAANNNNNGTGG 2 cut(s) 7590, 7625
DraI TTTAAA 2 cut(s) 3189, 3321
DraIII CACNNNGTG 1 cut(s) 5555
EaeI YGGCCR 6 cut(s) 525, 1957, 2010, 3197, 5913, 5984
EciI GGCGGA 1 cut(s) 688
Ecl136II GAGCTC 1 cut(s) 5207
Eco147I AGGCCT 1 cut(s) 637
Eco24I GRGCYC 2 cut(s) 5209, 6867
Eco31I GGTCTC 3 cut(s) 4227, 6633, 7008
Eco32I GATATC 5 cut(s) 3250, 3624, 4711, 5676, 5734
Eco47I GGWCC 8 cut(s) 1339, 1978, 2643, 4082, 4249, 4448, 5430, 7238
Eco53kI GAGCTC 1 cut(s) 5207
Eco72I CACGTG 1 cut(s) 4460
Eco81I CCTNAGG 1 cut(s) 1194
EcoICRI GAGCTC 1 cut(s) 5207
EcoO109I RGGNCCY 1 cut(s) 1339
EcoRI GAATTC 3 cut(s) 1866, 2358, 5298
EcoRII CCWGG 6 cut(s) 810, 4216, 5687, 6730, 6997, 7286
EcoRV GATATC 5 cut(s) 3250, 3624, 4711, 5676, 5734
EcoT22I ATGCAT 7 cut(s) 45, 79, 99, 2854, 3108, 3785, 5895
EcoT38I GRGCYC 2 cut(s) 5209, 6867
FalI AAGNNNNNCTT 8 cut(s) 939, 971, 2249, 2281, 2894, 2926, 5443, 5475
FaqI GGGAC 7 cut(s) 585, 1079, 1352, 1407, 2317, 3792, 4068
FauI CCCGC 3 cut(s) 271, 661, 6691
FauNDI CATATG 2 cut(s) 4056, 4439
FbaI TGATCA 4 cut(s) 799, 2607, 3561, 6213
FblI GTMKAC 6 cut(s) 1005, 1890, 2235, 4572, 4831, 5019
FriOI GRGCYC 2 cut(s) 5209, 6867
GlaI GCGC 1 cut(s) 1858
GsaI CCCAGC 2 cut(s) 2520, 5307
GsuI CTGGAG 4 cut(s) 2736, 3272, 4337, 6206
HaeII RGCGCY 1 cut(s) 1860
HapII CCGG 4 cut(s) 2022, 2955, 3118, 3264
HhaI GCGC 1 cut(s) 1859
Hin6I GCGC 1 cut(s) 1857
HinP1I GCGC 1 cut(s) 1857
HincII GTYRAC 5 cut(s) 1275, 1891, 4807, 6252, 6525
HindII GTYRAC 5 cut(s) 1275, 1891, 4807, 6252, 6525
HindIII AAGCTT 5 cut(s) 1112, 3435, 3497, 3794, 7460
HpaI GTTAAC 2 cut(s) 1275, 6525
HpaII CCGG 4 cut(s) 2022, 2955, 3118, 3264
HpyCH4IV ACGT 7 cut(s) 132, 1478, 3202, 4459, 5059, 7333, 7606
HpySE526I ACGT 7 cut(s) 132, 1478, 3202, 4459, 5059, 7333, 7606
HspAI GCGC 1 cut(s) 1857
KflI GGGWCCC 1 cut(s) 1339
Ksp22I TGATCA 4 cut(s) 799, 2607, 3561, 6213
KspAI GTTAAC 2 cut(s) 1275, 6525
LguI GCTCTTC 4 cut(s) 858, 2410, 4095, 5197
LmnI GCTCC 7 cut(s) 265, 956, 2527, 4459, 6488, 7249, 7363
Lsp1109I GCAGC 8 cut(s) 183, 1417, 1534, 1659, 2407, 2810, 3864, 7065
MabI ACCWGGT 1 cut(s) 6730
MaeII ACGT 7 cut(s) 132, 1478, 3202, 4459, 5059, 7333, 7606
MbiI CCGCTC 1 cut(s) 266
MhlI GDGCHC 8 cut(s) 1518, 2764, 4754, 5209, 6001, 6867, 7514, 7547
MlsI TGGCCA 4 cut(s) 527, 3199, 5915, 5986
MluNI TGGCCA 4 cut(s) 527, 3199, 5915, 5986
MlyI GAGTC 6 cut(s) 868, 1222, 1255, 3931, 6697, 6815
MmeI TCCRAC 4 cut(s) 1245, 4183, 5017, 7359
Mox20I TGGCCA 4 cut(s) 527, 3199, 5915, 5986
Mph1103I ATGCAT 7 cut(s) 45, 79, 99, 2854, 3108, 3785, 5895
MroXI GAANNNNTTC 2 cut(s) 384, 6557
MscI TGGCCA 4 cut(s) 527, 3199, 5915, 5986
MslI CAYNNNNRTG 7 cut(s) 1098, 1521, 2844, 2857, 4737, 6809, 7041
Msp20I TGGCCA 4 cut(s) 527, 3199, 5915, 5986
MspA1I CMGCKG 3 cut(s) 1235, 1984, 7319
MspI CCGG 4 cut(s) 2022, 2955, 3118, 3264
MspR9I CCNGG 9 cut(s) 812, 2023, 3119, 3264, 4218, 5689, 6732, 6999, 7288
Mva1269I GAATGC 5 cut(s) 43, 77, 2852, 3316, 4117
MvaI CCWGG 6 cut(s) 812, 4218, 5689, 6732, 6999, 7288
NciI CCSGG 3 cut(s) 2023, 3119, 3264
NcoI CCATGG 6 cut(s) 372, 2181, 4042, 4926, 5049, 5376
NdeI CATATG 2 cut(s) 4056, 4439
NmeAIII GCCGAG 1 cut(s) 699
NmuCI GTSAC 6 cut(s) 691, 2218, 4177, 5002, 6751, 7068
NsiI ATGCAT 7 cut(s) 45, 79, 99, 2854, 3108, 3785, 5895
NspI RCATGY 9 cut(s) 998, 1097, 2443, 3658, 4358, 5511, 6049, 6451, 6839
PaeI GCATGC 2 cut(s) 1097, 6049
PagI TCATGA 2 cut(s) 2589, 3132
PceI AGGCCT 1 cut(s) 637
PciI ACATGT 2 cut(s) 2439, 4354
PciSI GCTCTTC 4 cut(s) 858, 2410, 4095, 5197
PctI GAATGC 5 cut(s) 43, 77, 2852, 3316, 4117
PdmI GAANNNNTTC 2 cut(s) 384, 6557
PflFI GACNNNGTC 1 cut(s) 2216
Ple19I CGATCG 1 cut(s) 1669
PleI GAGTC 6 cut(s) 867, 1221, 1254, 3930, 6697, 6815
PmaCI CACGTG 1 cut(s) 4460
PmlI CACGTG 1 cut(s) 4460
PpsI GAGTC 6 cut(s) 867, 1221, 1254, 3930, 6697, 6815
Ppu21I YACGTR 1 cut(s) 4460
PpuMI RGGWCCY 1 cut(s) 1339
PscI ACATGT 2 cut(s) 2439, 4354
PshBI ATTAAT 1 cut(s) 3236
PsiI TTATAA 2 cut(s) 399, 759
Psp124BI GAGCTC 1 cut(s) 5209
Psp1406I AACGTT 1 cut(s) 7606
Psp5II RGGWCCY 1 cut(s) 1339
Psp6I CCWGG 6 cut(s) 810, 4216, 5687, 6730, 6997, 7286
PspCI CACGTG 1 cut(s) 4460
PspFI CCCAGC 2 cut(s) 2516, 5303
PspGI CCWGG 6 cut(s) 810, 4216, 5687, 6730, 6997, 7286
PspOMI GGGCCC 1 cut(s) 6863
PspPPI RGGWCCY 1 cut(s) 1339
PstI CTGCAG 3 cut(s) 2784, 6777, 7083
PstNI CAGNNNCTG 4 cut(s) 3463, 4769, 4880, 7078
PsyI GACNNNGTC 1 cut(s) 2216
PvuI CGATCG 1 cut(s) 1669
PvuII CAGCTG 3 cut(s) 1235, 1984, 7319
RseI CAYNNNNRTG 7 cut(s) 1098, 1521, 2844, 2857, 4737, 6809, 7041
SacI GAGCTC 1 cut(s) 5209
SalI GTCGAC 1 cut(s) 1889
SapI GCTCTTC 4 cut(s) 858, 2410, 4095, 5197
SchI GAGTC 6 cut(s) 868, 1222, 1255, 3931, 6697, 6815
ScrFI CCNGG 9 cut(s) 812, 2023, 3119, 3264, 4218, 5689, 6732, 6999, 7288
SduI GDGCHC 8 cut(s) 1518, 2764, 4754, 5209, 6001, 6867, 7514, 7547
SexAI ACCWGGT 1 cut(s) 6730
SfcI CTRYAG 9 cut(s) 153, 1861, 2780, 2810, 3123, 3302, 4330, 6773, 7079
SinI GGWCC 8 cut(s) 1339, 1978, 2643, 4082, 4249, 4448, 5430, 7238
SmiI ATTTAAAT 1 cut(s) 3321
SmiMI CAYNNNNRTG 7 cut(s) 1098, 1521, 2844, 2857, 4737, 6809, 7041
SmlI CTYRAG 6 cut(s) 3500, 3919, 4539, 5134, 6293, 7157
SmoI CTYRAG 6 cut(s) 3500, 3919, 4539, 5134, 6293, 7157
SphI GCATGC 2 cut(s) 1097, 6049
SseBI AGGCCT 1 cut(s) 637
SsiI CCGC 7 cut(s) 264, 668, 673, 5585, 6684, 6749, 7485
SspI AATATT 5 cut(s) 3754, 4276, 6128, 6505, 6885
SstI GAGCTC 1 cut(s) 5209
StuI AGGCCT 1 cut(s) 637
StyD4I CCNGG 9 cut(s) 810, 2021, 3117, 3262, 4216, 5687, 6730, 6997, 7286
SwaI ATTTAAAT 1 cut(s) 3321
TaiI ACGT 7 cut(s) 135, 1481, 3205, 4462, 5062, 7336, 7609
TaqII GACCGA 1 cut(s) 1062
TauI GCSGC 2 cut(s) 5588, 7488
TseFI GTSAC 6 cut(s) 691, 2218, 4177, 5002, 6751, 7068
TseI GCWGC 8 cut(s) 196, 1430, 1547, 1672, 2420, 2798, 3852, 7078
Tsp45I GTSAC 6 cut(s) 691, 2218, 4177, 5002, 6751, 7068
TspGWI ACGGA 8 cut(s) 495, 777, 1584, 3606, 3953, 4628, 5037, 5892
Tth111I GACNNNGTC 1 cut(s) 2216
VneI GTGCAC 1 cut(s) 5997
VpaK11BI GGWCC 8 cut(s) 1339, 1978, 2643, 4082, 4249, 4448, 5430, 7238
VspI ATTAAT 1 cut(s) 3236
XbaI TCTAGA 4 cut(s) 1708, 3445, 4343, 6235
XceI RCATGY 9 cut(s) 998, 1097, 2443, 3658, 4358, 5511, 6049, 6451, 6839
XcmI CCANNNNNNNNNTGG 2 cut(s) 1239, 4093
XmiI GTMKAC 6 cut(s) 1005, 1890, 2235, 4572, 4831, 5019
XmnI GAANNNNTTC 2 cut(s) 384, 6557
Zsp2I ATGCAT 7 cut(s) 45, 79, 99, 2854, 3108, 3785, 5895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.