Rmu_sc0007793.1_g000024

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007793.1
OG0000085
Physical Location & Seq
Forward (+)
111880 .. 115321
3442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007793.1_g000024.1.cds

Sequence Viewer

Length: 3165 bp
atgtcgagcagcaattttgaagcatttgaatcaacaagaaaagccatgaatgagctgatggaggcattagaagatgataaggtcgctgccattggggtctatggaatgggaggggttgggaagacaaccatggtgaaacatgtcggtgcacaagcccaaaaaatggggctttttgatcgtgtgattatggctgttgtatcccaaaccccagatccaagaaatattcaaggcgcacttgcggatctgctgggcttgaaattagaggaggagtccgaaagtggacgagccgatagattgcagaaggagatacttggaagaaataagatccttataatcttagacgacatttggaatacacttgacttgtcaagcattggaattcccagctacaacgagcttcaaatctgcaattccaaactgctattcaccacaaggagattgaatgtttgccataccatggagagccaagcaaaaattcatctcaatatcttatcagaagatgatgcttggaacttgtttttgaagaaggcaaaaaggcctattcaaaagtctacccctttctatgaagtagccagaaaggtagctagagaatgtgctggtcttccagttgcattgattgcagttgcgagggcacttggagataaaaattttgaagactggaaagaagcagctcgacaacttgagatgtctcaacctgccaaccctgacgagaagaaagttgtgttcaagtgtattaagttgagctatgattaccttgacagtgacgacgccaagtcttgcttcttgctttgctgcctattcccagaagattatgacatccaaattgaagacttgatgaagtatgggttcggaacagggttgtttcgagatgtcaacagcacaatagaagatgccagagtcagagcaaattcagtgactagacaccttatagcttcttgtctgcttttggatgggacaaaagaaggatgtgtgaggatgcatgatgtcattcgagatacggccatatacattgcattctctgtagatggccacgcctctctggtgaaaactaattgtcatttgaaagattggtcgatggatgcgggcgaaggctactcagcaatctcactaatcaagagcaacatttgcaagcttcccaacaagttggtatgttcaaaacttcagattttattgctacaaaaaaatgctgatataagagagatcccaataaccttttttcaaagccccaatgatttaagggtcttagatcttagcaacactggcatttcatcactgcccccatcattcagtctcctaactagactccaagctttgcatttagatgattgctggtccatgattgacatatccatacttggaaaactgaaaaagcttgagattcttagtatgagacgctgtgactctattaagaaatttccaaaagagattggaaatttgacgaatttaagaatgttggacttgactaaaacccattttgagacagttccctcgcaagtgatatcaaggttgtatagattggaagtactgtacatgatgtgttattttggcgagtggggttgtaaagctgcgggaggcttcctgtcttttcgttgtaagaatgctagctttgatgagttaattggcttgtcaagtttaaacactttgcaggttaccgtatgtgatgcagaatgcttgcctcaaaacgttgagttcaatccaaattgggacaggttttgtataattatccaaagatacaacatggaagattttgtatatcttgacaacggcttcccacatctttcttcaagaacattgatcacggacgaaaccatgaataacttacccgactggttcatcagtgtagtgacagaaagaacagatgatttatggtacagaggttgctatggcttaactaaccttctcgaggaacacgaccgtgggagattacatggactcaagtatttgtgtatagaatcttccaaatatgccaaagtgttgttgaacacaataacatggactagggtgtcaaatgaacctgtgtttgatcacttggaagagttggaaatctcggggtgtctcttggaggagctatgtgtcggtgaattaccacctgactctctacgtaatcttaagaaattgatgatgggtatctgtcattggttggtgaaaccgcttttaccgtcaaagttgttgcacagattagagagtctggaagaactatgttgtagtcgtatgcgggaaatgaaatatgtgtttggatttgaagggcatgaaccacaacacgttgtcttgacgaggctgagactgatttcattgagatccatgaacagcttaataaacatatgggatggtcctgctccatctggaatcttccagagtctcatggggtgtctcttggaggagctatgtgtcggtgaattaccacctggctctctacgtaatcttaagaaattgatgatgggtatgtgtgattggttggtgaaaccgcttttactgtcaaagttgttgcacagattagagagtctggaagaactatgttgtagtcatatgcgggaaatgaaatatgtgtttggatttgaagggcatgaaccacaacacgttgtcttgacgaggctaagactgatttcattgagatccatgaacagcttaataaacatatgggatggtcctgctccatctggaatcttccagagtctcaaaatcttttccttgtttaattgcccgaaactggaatatctcttcacatctgatgtagctcgatgtcttttgcaattggaaggcgtttgggtagaggaatgcgatagcttggacagaataattgaagccagtgaggaaatagagagcaacaagatcgtttttccacagttgaagagcttggttttaaaaggtcttccaaagctgacaaggctgtccggtacaagcagcagtactattgatattgaaatcgagtgccctacattggaacacttacatgtctctgcgtgcccccagttatcaatttctgcttctgatttcaacagcagcagccaagtccaactagatgatcacccgcatcggcgcacactacagttttggtccttttggatcgacatcgtgagttaccgctcatgtcctcgagattggatgagaaagctccttttagaggagtggaaccaactgaattgtagaccaagagggccccagtga

Protein Analysis

1054

Amino Acids

119.97

Weight (kDa)

5.94

Isoelectric Point (pI)

46.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 332
AasI GACNNNNNNGTC 2 cut(s) 2002, 2887
Acc36I ACCTGC 2 cut(s) 703, 1636
AccB7I CCANNNNNTGG 2 cut(s) 163, 457
AccBSI CCGCTC 1 cut(s) 3084
AccI GTMKAC 2 cut(s) 551, 3145
AciI CCGC 9 cut(s) 239, 1082, 1568, 2150, 2215, 2465, 2530, 3029, 3082
AclI AACGTT 1 cut(s) 1683
AclWI GGATC 7 cut(s) 206, 249, 319, 1195, 2292, 2607, 3071
AcoI YGGCCR 2 cut(s) 999, 1027
AcsI RAATTY 7 cut(s) 378, 474, 646, 907, 1412, 1432, 1441
AcuI CTGAAG 1 cut(s) 1145
AcyI GRCGYC 1 cut(s) 768
AfaI GTAC 5 cut(s) 1524, 1529, 1871, 2896, 2908
AfiI CCNNNNNNNGG 6 cut(s) 163, 457, 1903, 2707, 2938, 3121
AflII CTTAAG 2 cut(s) 2108, 2423
AflIII ACRYGT 4 cut(s) 139, 2260, 2575, 2950
AhdI GACNNNNNGTC 1 cut(s) 772
AjnI CCWGG 1 cut(s) 2404
AjuI GAANNNNNNNTTGG 6 cut(s) 407, 439, 459, 491, 764, 796
AleI CACNNNNGTG 1 cut(s) 1914
Alw21I GWGCWC 1 cut(s) 151
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 7 cut(s) 206, 249, 319, 1195, 2292, 2607, 3071
Ama87I CYCGRG 3 cut(s) 1901, 2047, 3093
AoxI GGCC 4 cut(s) 536, 999, 1027, 3155
ApaI GGGCCC 1 cut(s) 3159
ApaLI GTGCAC 1 cut(s) 147
ApeKI GCWGC 8 cut(s) 9, 86, 668, 792, 1565, 2901, 3000, 3003
ApoI RAATTY 7 cut(s) 378, 474, 646, 907, 1412, 1432, 1441
AspLEI GCGC 2 cut(s) 233, 3039
AspS9I GGNCC 6 cut(s) 1332, 2330, 2645, 3054, 3155, 3156
AsuHPI GGTGA 8 cut(s) 145, 418, 1054, 2090, 2155, 2405, 2470, 3017
AsuNHI GCTAGC 1 cut(s) 1601
AvaI CYCGRG 3 cut(s) 1901, 2047, 3093
AvaII GGWCC 4 cut(s) 1332, 2330, 2645, 3054
BaeGI GKGCMC 5 cut(s) 151, 634, 2933, 2966, 3159
BaeI ACNNNNGTAYC 2 cut(s) 1861, 1894
BalI TGGCCA 1 cut(s) 1029
BanII GRGCYC 1 cut(s) 3159
BarI GAAGNNNNNNTAC 2 cut(s) 1939, 1971
BbsI GAAGAC 5 cut(s) 128, 593, 660, 834, 2861
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 8 cut(s) 21, 73, 680, 779, 1552, 2913, 3012, 3015
BceAI ACGGC 2 cut(s) 1014, 1780
BcgI CGANNNNNNTGC 2 cut(s) 2812, 2846
BciT130I CCWGG 1 cut(s) 2406
BciVI GTATCC 1 cut(s) 208
BclI TGATCA 3 cut(s) 1794, 2023, 3022
BfaI CTAG 6 cut(s) 585, 918, 1299, 1602, 1998, 3017
BfmI CTRYAG 2 cut(s) 1020, 3044
BfrI CTTAAG 2 cut(s) 2108, 2423
BfuAI ACCTGC 2 cut(s) 703, 1636
BfuI GTATCC 1 cut(s) 208
BglII AGATCT 1 cut(s) 1246
BisI GCNGC 8 cut(s) 10, 87, 669, 793, 1566, 2902, 3001, 3004
BlsI GCNGC 8 cut(s) 11, 88, 670, 794, 1567, 2903, 3002, 3005
BmcAI AGTACT 2 cut(s) 1524, 2908
Bme1390I CCNGG 1 cut(s) 2406
Bme18I GGWCC 4 cut(s) 1332, 2330, 2645, 3054
BmeRI GACNNNNNGTC 1 cut(s) 772
BmeT110I CYCGRG 3 cut(s) 1901, 2047, 3093
BmgT120I GGNCC 6 cut(s) 1332, 2330, 2645, 3054, 3155, 3156
BmiI GGNNCC 3 cut(s) 3131, 3157, 3158
BmrFI CCNGG 1 cut(s) 2406
BmrI ACTGGG 2 cut(s) 2962, 3154
BmsI GCATC 6 cut(s) 493, 880, 966, 1069, 1651, 3040
BmtI GCTAGC 1 cut(s) 1605
BmuI ACTGGG 2 cut(s) 2962, 3154
BpiI GAAGAC 5 cut(s) 128, 593, 660, 834, 2861
BpuEI CTTGAG 3 cut(s) 701, 1394, 1919
BsaAI YACGTR 2 cut(s) 2102, 2417
BsaBI GATNNNNATC 2 cut(s) 2126, 3068
BsaHI GRCGYC 1 cut(s) 768
BsaJI CCNNGG 3 cut(s) 129, 456, 1915
BsaWI WCCGGW 1 cut(s) 2891
Bsc4I CCNNNNNNNGG 6 cut(s) 163, 457, 1903, 2707, 2938, 3121
Bse1I ACTGG 8 cut(s) 605, 662, 1264, 1832, 2712, 2805, 2968, 3160
Bse3DI GCAATG 1 cut(s) 1008
Bse8I GATNNNNATC 2 cut(s) 2126, 3068
BseBI CCWGG 1 cut(s) 2406
BseDI CCNNGG 3 cut(s) 129, 456, 1915
BseGI GGATG 8 cut(s) 816, 955, 971, 981, 1084, 2332, 2647, 3108
BseJI GATNNNNATC 2 cut(s) 2126, 3068
BseLI CCNNNNNNNGG 6 cut(s) 163, 457, 1903, 2707, 2938, 3121
BseMI GCAATG 1 cut(s) 1008
BseMII CTCAG 2 cut(s) 1110, 2270
BseNI ACTGG 8 cut(s) 605, 662, 1264, 1832, 2712, 2805, 2968, 3160
BseRI GAGGAG 5 cut(s) 278, 281, 2078, 2393, 3137
BseSI GKGCMC 5 cut(s) 151, 634, 2933, 2966, 3159
BseXI GCAGC 8 cut(s) 21, 73, 680, 779, 1552, 2913, 3012, 3015
BseYI CCCAGC 2 cut(s) 247, 383
Bsh1285I CGRYCG 1 cut(s) 1915
BshFI GGCC 4 cut(s) 538, 1001, 1029, 3157
BsiEI CGRYCG 1 cut(s) 1915
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 3 cut(s) 1901, 2047, 3093
BsiSI CCGG 1 cut(s) 2892
BslFI GGGAC 2 cut(s) 967, 1718
BslI CCNNNNNNNGG 6 cut(s) 163, 457, 1903, 2707, 2938, 3121
BsmBI CGTCTC 1 cut(s) 1384
BsmFI GGGAC 2 cut(s) 967, 1718
BsmI GAATGC 4 cut(s) 1013, 1603, 1673, 2780
BsnI GGCC 4 cut(s) 538, 1001, 1029, 3157
BsoBI CYCGRG 3 cut(s) 1901, 2047, 3093
Bsp120I GGGCCC 1 cut(s) 3155
Bsp1286I GDGCHC 5 cut(s) 151, 634, 2933, 2966, 3159
Bsp1407I TGTACA 1 cut(s) 1527
Bsp19I CCATGG 2 cut(s) 129, 456
BspACI CCGC 9 cut(s) 239, 1082, 1568, 2150, 2215, 2465, 2530, 3029, 3082
BspANI GGCC 4 cut(s) 538, 1001, 1029, 3157
BspCNI CTCAG 2 cut(s) 1109, 2271
BspLI GGNNCC 3 cut(s) 3131, 3157, 3158
BspMI ACCTGC 2 cut(s) 703, 1636
BspOI GCTAGC 1 cut(s) 1605
BspPI GGATC 7 cut(s) 206, 249, 319, 1195, 2292, 2607, 3071
BspQI GCTCTTC 1 cut(s) 2843
BspTI CTTAAG 2 cut(s) 2108, 2423
BsrBI CCGCTC 1 cut(s) 3084
BsrDI GCAATG 1 cut(s) 1008
BsrGI TGTACA 1 cut(s) 1527
BsrI ACTGG 8 cut(s) 605, 662, 1264, 1832, 2712, 2805, 2968, 3160
BssECI CCNNGG 3 cut(s) 129, 456, 1915
BssNI GRCGYC 1 cut(s) 768
BssT1I CCWWGG 2 cut(s) 129, 456
Bst2UI CCWGG 1 cut(s) 2406
Bst4CI ACNGT 9 cut(s) 761, 1483, 1527, 1654, 1916, 2160, 2475, 2844, 3048
Bst6I CTCTTC 3 cut(s) 2028, 2723, 2843
BstACI GRCGYC 1 cut(s) 768
BstAFI CTTAAG 2 cut(s) 2108, 2423
BstAPI GCANNNNNTGC 2 cut(s) 617, 1125
BstAUI TGTACA 1 cut(s) 1527
BstBAI YACGTR 2 cut(s) 2102, 2417
BstC8I GCNNGC 5 cut(s) 1084, 1130, 1603, 1673, 2962
BstDEI CTNAG 7 cut(s) 337, 1096, 1243, 1250, 1382, 2279, 2594
BstDSI CCRYGG 3 cut(s) 129, 456, 1915
BstEII GGTNACC 1 cut(s) 1648
BstENI CCTNNNNNAGG 2 cut(s) 1901, 3119
BstF5I GGATG 8 cut(s) 816, 955, 971, 981, 1084, 2332, 2647, 3108
BstHHI GCGC 2 cut(s) 233, 3039
BstMCI CGRYCG 1 cut(s) 1915
BstMWI GCNNNNNNNGC 4 cut(s) 617, 1125, 1260, 2884
BstNI CCWGG 1 cut(s) 2406
BstNSI RCATGY 2 cut(s) 143, 2954
BstPI GGTNACC 1 cut(s) 1648
BstSCI CCNGG 1 cut(s) 2404
BstSFI CTRYAG 2 cut(s) 1020, 3044
BstSLI GKGCMC 5 cut(s) 151, 634, 2933, 2966, 3159
BstSNI TACGTA 2 cut(s) 2102, 2417
BstV1I GCAGC 8 cut(s) 21, 73, 680, 779, 1552, 2913, 3012, 3015
BstV2I GAAGAC 5 cut(s) 128, 593, 660, 834, 2861
BstX2I RGATCY 7 cut(s) 211, 241, 324, 1200, 1246, 2297, 2612
BstXI CCANNNNNNTGG 1 cut(s) 1144
BstYI RGATCY 7 cut(s) 211, 241, 324, 1200, 1246, 2297, 2612
BsuI GTATCC 1 cut(s) 208
BsuRI GGCC 4 cut(s) 538, 1001, 1029, 3157
BtgI CCRYGG 3 cut(s) 129, 456, 1915
BtsCI GGATG 8 cut(s) 816, 955, 971, 981, 1084, 2332, 2647, 3108
BtsI GCAGTG 1 cut(s) 1271
BtsIMutI CAGTG 6 cut(s) 766, 918, 1257, 1271, 1843, 2812
BveI ACCTGC 2 cut(s) 703, 1636
Cac8I GCNNGC 5 cut(s) 1084, 1130, 1603, 1673, 2962
CfoI GCGC 2 cut(s) 233, 3039
Cfr13I GGNCC 6 cut(s) 1332, 2330, 2645, 3054, 3155, 3156
CseI GACGC 2 cut(s) 776, 1401
Csp6I GTAC 5 cut(s) 1523, 1528, 1870, 2895, 2907
CviQI GTAC 5 cut(s) 1523, 1528, 1870, 2895, 2907
DdeI CTNAG 7 cut(s) 337, 1096, 1243, 1250, 1382, 2279, 2594
DraI TTTAAA 2 cut(s) 1635, 2862
DrdI GACNNNNNNGTC 2 cut(s) 2002, 2887
DriI GACNNNNNGTC 1 cut(s) 772
DseDI GACNNNNNNGTC 2 cut(s) 2002, 2887
EaeI YGGCCR 2 cut(s) 999, 1027
Eam1104I CTCTTC 3 cut(s) 2028, 2723, 2843
Eam1105I GACNNNNNGTC 1 cut(s) 772
EarI CTCTTC 3 cut(s) 2028, 2723, 2843
Eco105I TACGTA 2 cut(s) 2102, 2417
Eco130I CCWWGG 2 cut(s) 129, 456
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 1 cut(s) 3159
Eco32I GATATC 1 cut(s) 1500
Eco47I GGWCC 4 cut(s) 1332, 2330, 2645, 3054
Eco57I CTGAAG 1 cut(s) 1145
Eco88I CYCGRG 3 cut(s) 1901, 2047, 3093
Eco91I GGTNACC 1 cut(s) 1648
EcoNI CCTNNNNNAGG 2 cut(s) 1901, 3119
EcoO109I RGGNCCY 2 cut(s) 3155, 3156
EcoO65I GGTNACC 1 cut(s) 1648
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 1 cut(s) 2404
EcoRV GATATC 1 cut(s) 1500
EcoT14I CCWWGG 2 cut(s) 129, 456
EcoT22I ATGCAT 1 cut(s) 981
EcoT38I GRGCYC 1 cut(s) 3159
ErhI CCWWGG 2 cut(s) 129, 456
Esp3I CGTCTC 1 cut(s) 1384
FalI AAGNNNNNCTT 4 cut(s) 219, 251, 764, 796
FaqI GGGAC 2 cut(s) 967, 1718
FauI CCCGC 5 cut(s) 1075, 1561, 2208, 2523, 3036
FauNDI CATATG 3 cut(s) 2321, 2526, 2636
FbaI TGATCA 3 cut(s) 1794, 2023, 3022
FblI GTMKAC 2 cut(s) 551, 3145
Fnu4HI GCNGC 8 cut(s) 10, 87, 669, 793, 1566, 2902, 3001, 3004
FokI GGATG 8 cut(s) 803, 962, 978, 988, 1091, 2339, 2654, 3115
FriOI GRGCYC 1 cut(s) 3159
Fsp4HI GCNGC 8 cut(s) 10, 87, 669, 793, 1566, 2902, 3001, 3004
FspBI CTAG 6 cut(s) 585, 918, 1299, 1602, 1998, 3017
GlaI GCGC 2 cut(s) 232, 3038
GluI GCNGC 8 cut(s) 10, 87, 669, 793, 1566, 2902, 3001, 3004
GsaI CCCAGC 2 cut(s) 251, 387
HaeIII GGCC 4 cut(s) 538, 1001, 1029, 3157
HapII CCGG 1 cut(s) 2892
HgaI GACGC 2 cut(s) 776, 1401
HhaI GCGC 2 cut(s) 233, 3039
Hin1I GRCGYC 1 cut(s) 768
Hin6I GCGC 2 cut(s) 231, 3037
HinP1I GCGC 2 cut(s) 231, 3037
HincII GTYRAC 1 cut(s) 874
HindII GTYRAC 1 cut(s) 874
HindIII AAGCTT 3 cut(s) 1130, 1308, 1370
HpaII CCGG 1 cut(s) 2892
HphI GGTGA 8 cut(s) 145, 418, 1054, 2090, 2155, 2405, 2470, 3017
Hpy166II GTNNAC 5 cut(s) 149, 281, 552, 874, 3146
Hpy188I TCNGA 7 cut(s) 274, 496, 851, 902, 1164, 2728, 2989
Hpy8I GTNNAC 5 cut(s) 149, 281, 552, 874, 3146
Hpy99I CGWCG 1 cut(s) 770
HpyAV CCTTC 8 cut(s) 295, 520, 956, 1082, 1907, 2237, 2552, 2750
HpyCH4III ACNGT 9 cut(s) 761, 1483, 1527, 1654, 1916, 2160, 2475, 2844, 3048
HpyCH4IV ACGT 5 cut(s) 1683, 2101, 2262, 2416, 2577
HpyF10VI GCNNNNNNNGC 4 cut(s) 617, 1125, 1260, 2884
HpyF3I CTNAG 7 cut(s) 337, 1096, 1243, 1250, 1382, 2279, 2594
HpySE526I ACGT 5 cut(s) 1683, 2101, 2262, 2416, 2577
Hsp92I GRCGYC 1 cut(s) 768
HspAI GCGC 2 cut(s) 231, 3037
Ksp22I TGATCA 3 cut(s) 1794, 2023, 3022
LguI GCTCTTC 1 cut(s) 2843
LmnI GCTCC 5 cut(s) 2065, 2341, 2380, 2656, 3117
Lsp1109I GCAGC 8 cut(s) 21, 73, 680, 779, 1552, 2913, 3012, 3015
LweI GCATC 6 cut(s) 493, 880, 966, 1069, 1651, 3040
MaeI CTAG 6 cut(s) 585, 918, 1299, 1602, 1998, 3017
MaeII ACGT 5 cut(s) 1683, 2101, 2262, 2416, 2577
MaeIII GTNAC 6 cut(s) 761, 913, 1397, 1648, 1843, 3077
MbiI CCGCTC 1 cut(s) 3084
MfeI CAATTG 1 cut(s) 2750
MflI RGATCY 7 cut(s) 211, 241, 324, 1200, 1246, 2297, 2612
MhlI GDGCHC 5 cut(s) 151, 634, 2933, 2966, 3159
MlsI TGGCCA 1 cut(s) 1029
MluNI TGGCCA 1 cut(s) 1029
MmeI TCCRAC 3 cut(s) 1434, 2019, 3037
Mox20I TGGCCA 1 cut(s) 1029
Mph1103I ATGCAT 1 cut(s) 981
MscI TGGCCA 1 cut(s) 1029
MslI CAYNNNNRTG 4 cut(s) 144, 1320, 1914, 2949
Msp20I TGGCCA 1 cut(s) 1029
MspCI CTTAAG 2 cut(s) 2108, 2423
MspI CCGG 1 cut(s) 2892
MspR9I CCNGG 1 cut(s) 2406
MssI GTTTAAAC 1 cut(s) 1635
MunI CAATTG 1 cut(s) 2750
Mva1269I GAATGC 4 cut(s) 1013, 1603, 1673, 2780
MvaI CCWGG 1 cut(s) 2406
MwoI GCNNNNNNNGC 4 cut(s) 617, 1125, 1260, 2884
NcoI CCATGG 2 cut(s) 129, 456
NdeI CATATG 3 cut(s) 2321, 2526, 2636
NheI GCTAGC 1 cut(s) 1601
NlaIV GGNNCC 3 cut(s) 3131, 3157, 3158
NmuCI GTSAC 4 cut(s) 761, 913, 1397, 1843
NsiI ATGCAT 1 cut(s) 981
NspI RCATGY 2 cut(s) 143, 2954
OliI CACNNNNGTG 1 cut(s) 1914
PaeR7I CTCGAG 2 cut(s) 1901, 3093
PceI AGGCCT 1 cut(s) 538
PciI ACATGT 2 cut(s) 139, 2950
PciSI GCTCTTC 1 cut(s) 2843
PcsI WCGNNNNNNNCGW 1 cut(s) 1908
PctI GAATGC 4 cut(s) 1013, 1603, 1673, 2780
PfeI GAWTC 5 cut(s) 29, 1378, 1952, 2346, 2661
PflMI CCANNNNNTGG 2 cut(s) 163, 457
PkrI GCNGC 8 cut(s) 11, 88, 670, 794, 1567, 2903, 3002, 3005
PmeI GTTTAAAC 1 cut(s) 1635
Ppu21I YACGTR 2 cut(s) 2102, 2417
PscI ACATGT 2 cut(s) 139, 2950
PsiI TTATAA 1 cut(s) 332
Psp1406I AACGTT 1 cut(s) 1683
Psp6I CCWGG 1 cut(s) 2404
PspEI GGTNACC 1 cut(s) 1648
PspFI CCCAGC 2 cut(s) 247, 383
PspGI CCWGG 1 cut(s) 2404
PspN4I GGNNCC 3 cut(s) 3131, 3157, 3158
PspOMI GGGCCC 1 cut(s) 3155
PspPI GGNCC 6 cut(s) 1332, 2330, 2645, 3054, 3155, 3156
PsuI RGATCY 7 cut(s) 211, 241, 324, 1200, 1246, 2297, 2612
RsaI GTAC 5 cut(s) 1524, 1529, 1871, 2896, 2908
RsaNI GTAC 5 cut(s) 1523, 1528, 1870, 2895, 2907
RseI CAYNNNNRTG 4 cut(s) 144, 1320, 1914, 2949
SapI GCTCTTC 1 cut(s) 2843
SatI GCNGC 8 cut(s) 10, 87, 669, 793, 1566, 2902, 3001, 3004
Sau96I GGNCC 6 cut(s) 1332, 2330, 2645, 3054, 3155, 3156
ScaI AGTACT 2 cut(s) 1524, 2908
ScrFI CCNGG 1 cut(s) 2406
SduI GDGCHC 5 cut(s) 151, 634, 2933, 2966, 3159
SfaNI GCATC 6 cut(s) 493, 880, 966, 1069, 1651, 3040
SfcI CTRYAG 2 cut(s) 1020, 3044
Sfr274I CTCGAG 2 cut(s) 1901, 3093
SinI GGWCC 4 cut(s) 1332, 2330, 2645, 3054
SlaI CTCGAG 2 cut(s) 1901, 3093
SmiMI CAYNNNNRTG 4 cut(s) 144, 1320, 1914, 2949
SmlI CTYRAG 7 cut(s) 680, 1373, 1901, 1934, 2108, 2423, 3093
SmoI CTYRAG 7 cut(s) 680, 1373, 1901, 1934, 2108, 2423, 3093
SnaBI TACGTA 2 cut(s) 2102, 2417
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 9 cut(s) 239, 1082, 1568, 2150, 2215, 2465, 2530, 3029, 3082
SspI AATATT 1 cut(s) 223
SspMI CTAG 6 cut(s) 585, 918, 1299, 1602, 1998, 3017
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 1 cut(s) 2404
StyI CCWWGG 2 cut(s) 129, 456
TaaI ACNGT 9 cut(s) 761, 1483, 1527, 1654, 1916, 2160, 2475, 2844, 3048
TaiI ACGT 5 cut(s) 1686, 2104, 2265, 2419, 2580
TatI WGTACW 3 cut(s) 1522, 1527, 2906
TfiI GAWTC 5 cut(s) 29, 1378, 1952, 2346, 2661
TscAI CASTG 6 cut(s) 766, 918, 1264, 1278, 1843, 2812
TseFI GTSAC 4 cut(s) 761, 913, 1397, 1843
TseI GCWGC 8 cut(s) 9, 86, 668, 792, 1565, 2901, 3000, 3003
Tsp45I GTSAC 4 cut(s) 761, 913, 1397, 1843
TspGWI ACGGA 1 cut(s) 1814
TspRI CASTG 6 cut(s) 766, 918, 1264, 1278, 1843, 2812
Van91I CCANNNNNTGG 2 cut(s) 163, 457
Vha464I CTTAAG 2 cut(s) 2108, 2423
VneI GTGCAC 1 cut(s) 147
VpaK11BI GGWCC 4 cut(s) 1332, 2330, 2645, 3054
XagI CCTNNNNNAGG 2 cut(s) 1901, 3119
XapI RAATTY 7 cut(s) 378, 474, 646, 907, 1412, 1432, 1441
XceI RCATGY 2 cut(s) 143, 2954
XhoI CTCGAG 2 cut(s) 1901, 3093
XmiI GTMKAC 2 cut(s) 551, 3145
XspI CTAG 6 cut(s) 585, 918, 1299, 1602, 1998, 3017
ZrmI AGTACT 2 cut(s) 1524, 2908
Zsp2I ATGCAT 1 cut(s) 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.