Rmu_sc0000689.1_g000032

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000689.1
OG0000085
Physical Location & Seq
Forward (+)
126469 .. 134274
7806 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000689.1_g000032.1.cds

Sequence Viewer

Length: 4710 bp
atggccttggaatccccaacggcctctgcatcactttctacatcggctccttggtggaagtatgaggtgtttttgagtttcaggagtgaagacactcggcggggttttacttcttatttgtacaaggaattgcaaaacagagaaatcaagacattcatggatatcgacggaactagtttggatagaggagaggggatttctcaaagtatcgtagaggccattcaagaatcaagatttgcaatcgttgttctctcgcaaaattatgcttcttccagttggtgtttggatgaactcacacagattatgcagtgcatggaaaataaggaaacaattctgccagttttctatcacgtggatccctctgaagtgcgctctcaaaggggggtgtgcggagcggccttggctgcacatgaagagcagtttaaagatcaaaaagagaggctgatgaaatggagggacgccttgaacaaaatcagcagcatctttggctgggtatgtgggagttctgagccagaaggacagattgtccaacaaatcgcggaatttgtctgcagcaaacctattgaaattaagtcgacggaagatattgaaactcatggaacttttgttttcaatggccttgatcaacctaaaaggcgacctgtacatcacttccttgagctaaaatcagctcctcgttggaagtatgatgtgtttataaatttcaggggtgaggacacttgtaagggttttctgtcccatttactagctgaattgcaaaagaaaccagcacacatgaacacagtaaagaatgatgaaccacttccaaaagggcggaatatatcttcgtatctcctaaacgccatagaagaggtgaggtttgccattgttgttctttcgcaagactttgcttcttcatcatggtgcctagaggaactagcaaagatttttgaatgcatgggaaaccaaaatagaattctgccaatcttttatcatgtggatccctctgaggtgcgacatcaaagggggagttttggagatgccttcgctgtacatgaagaaagatttcgggataatcatgagaaggtcaggcggtggagacgtgttttatcaatggtagccaacatccctggatggacttcagaaaaatatgagtatgaaagagaacttatcaaagacgttgtgcaagctatgtgcagtagactagttcagtctacagagtcgacagaagattttgaagcaacaggagatgtcatggaccaaacttctccccagcctgacccagctcctgtgtggaagaatgatgtgctttcgggtttcgggatggaagacactcgcaggggttttgtagcccattcagaccatgatttgccaaacacaggactacgtaaaacattcaaggatgaagaccagcttgaaaaaggggtagccctcccctctgcatctctttcctcaactgaaccaagtcttcaaccagctgttgggcagaagaatgatgagtttttgggtttcaggagaaacgacaatcataggggttttgtcacccattcaagtcatgaaatacaaaagaccaggatgactaagacattcaccgatgaagaacatcttgaaaaagggatagctgcgtctccgccttcatcagctgaacgagatcctcggccgaagtatgatgtgtttttgagtttcaggggggaagacactcgtaggggttttatagcccatttataccgtgaattgcaaaacaccagagtgattaaaactttcaaggatgacaggcaactagaaaaagggacggtcattgcttcaaatctcctaatggcaatcgaagaatcaagatttgcgatcattgtgttgtcaacaaattatgcttcttcttcatggatgcttataatattggacgacatttgggagagttttgaactctcgagcattggaattcccagtcacaatgagcttcaaaggtgcaattctaaagttatactcaccacaaggaaaagcaatgtctgcgattctatggggtgccatgcccagatcactctcaatgttctgtcagaggaagactcttggaagttattcatggagacgtcggggaagtcctttcatgaatctaccatttcctatgatgaagcgagaaaggtagctcgagaatgctgtggtctcccaaaagcaataaaagcagctgcaaggtcacttggagataaatacatggacgaatggaatgaagcagttgtaacagcatttggagatgactgcttggacaaatggaatgaaacagctccacctgtcaacttcgaagctgaggaagacgcatttcattcattggcatctgatgatgccaagtcatgcttcttgctatgctgcctattccccgaaaattatgatatcccaattgaagatctgctcaagtatgcgattggaaaaggtttgtttcaatatgatacaatgcaagaagccagagatagagcacattctgtggtcaagtacctcaaagtttctagattgcttttagacggtagaaagaagggatgcgtaaggatgactgatggcattcgaaatctggccatgtccattgcgttgcccaaagaaggcgatgggtttttagtaaaagctggttgtgaactagaggagtggccagaggcaggatggctgcaagaaatcacttccaggaacttgaactgcccaatagatgcccatgaagcctactcaacaatctcactcatgagaaacaagcttcacaagcttcccgaatatttggtatgttcaaaactccaaattttattactacaaagtaatgccggaatatgtgacatcccagaaacctttttgcaaagtcctaatccgctaagggtctttgatcttagcttcactggtgtttcgtcactaccttcatcattcagtttcctaaccaacctccaaactttgaatttggattcttgcaagaatttaagtaacatatccgttctaggaaaacttaataagaaacttaagattcttagtatgagagaacttcctcttaagaaatttccaaaacaaataggagatttgaccagtctaaggatgttggacgtcactggtagatatcttgaaactatcccatctaaagtgatatcaaggttgtatagattggaagaactgcacatgaaatttcagtttgggaagtggggaagtaaaattgaggatgcagttgatgaagaaaccaatgctgactttgatgagttgactggcttgttggatttaaacattttggaagtttacatatctgatgccgcatgcttgcctaaaagtgtcgagtacatgccgaattgggcagaatttgatatatgcatcagcagacacgtcccttgcatggcgctccctcaacatgatggtttttcaagaaccttgactcttgacacaacaatcagaagcttaccgtattggtttatcagcgctgtgacagagaaggtggagaagctagagtacacagattgcgaagacttgaatgacatcgttagggaatatgaccatggcagattacttgcactgaaatatctctctgtgaacgggaaccgtaagaacttgaaagagataatcaacacaatgacacgggtttcaaataaaccagtttttgagaacttggaagagttgcatctgcactgcttatattccctcaaggagttatgtgttggtgagctaccacctgggtccctacgcaagctcaagttcttgaaagtgcaaacttgtcgtagcttggtgaatgcacttttaccatcaacattgttgcagagactacaaaatctggaagaaatcatttgtgtaaatctggaaggaatgaaatatgtatttggatctgatgaagggcttgatccagaaaatattttcttgaggaaattgagggagatgagattgtctgctctatacgaactagtaagcatatgtaatggtcctgctccgcgtgtaatcttccagaatcttaaagttttggcaatttgcgagtgcaaggaattgaaaaatctcttcacaatagatgtagttgaatgtctttgtcagttggaagacctttccatagagcactgtcctagcttggacagagtcattgaagcaagcaatagcttgaacagcaagattaaacttctgaagttgaagaagttagctttgatagatcttccggtgctcacaaggttctgcactgaaggtggtactattgaaactgagtgcccttcattggaatacttgtatgtggagaagtgcctccagttttcgtattttgcttaccacttagacaacaagaaccaagtccacttcaatgataaacaacatttcagttctttagtgaaaaggttgccaaaaacaatcgctggaaaatctggcctaaaaaagacaccagaaaagtggccggaaagttgtcggaaagttgccagaggagatgtggcagtaccggagctaccgtggcagtgtcggggtgacgtggcagatccgaaggtgacgtggcagtacttagctgatgtggcagcgccgaagctaacgtggttgtgggaggttcagtcgaccggttcagttacttttaggcaggttttcgtgagttttcttccgagtattttccgcgggtggtatggagcttctagtggccggttcagtaggtttctgacgtgttctggtggttctgcagccggttctggattcctggggtcaagggcttcacgttgtgtagcggaggcagaaaatgtttcaaggttttgtattcggatttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1569

Amino Acids

178.24

Weight (kDa)

5.86

Isoelectric Point (pI)

47.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 698, 1868
AatII GACGTC 2 cut(s) 2066, 3048
Acc36I ACCTGC 1 cut(s) 4519
AccB1I GGYRCC 2 cut(s) 903, 1998
AccB7I CCANNNNNTGG 1 cut(s) 1460
AccBSI CCGCTC 1 cut(s) 395
AccI GTMKAC 5 cut(s) 575, 1180, 1193, 1202, 4505
AccII CGCG 3 cut(s) 539, 3913, 4563
AclWI GGATC 8 cut(s) 350, 363, 974, 987, 1625, 3814, 3818, 4427
AcoI YGGCCR 5 cut(s) 1637, 2538, 2609, 4352, 4585
AcuI CTGAAG 4 cut(s) 384, 1104, 4115, 4170
AcvI CACGTG 1 cut(s) 352
AcyI GRCGYC 3 cut(s) 459, 2063, 3045
AdeI CACNNNGTG 1 cut(s) 4664
AfaI GTAC 9 cut(s) 122, 645, 1032, 2462, 3272, 3440, 4159, 4395, 4454
AfeI AGCGCT 1 cut(s) 3409
AfiI CCNNNNNNNGG 7 cut(s) 1358, 1460, 2564, 2618, 3033, 3325, 4183
AflII CTTAAG 2 cut(s) 2963, 2993
AflIII ACRYGT 3 cut(s) 1081, 3313, 4607
AgeI ACCGGT 1 cut(s) 4508
AhdI GACNNNNNGTC 1 cut(s) 524
AhlI ACTAGT 3 cut(s) 173, 1183, 3883
AjiI CACGTC 5 cut(s) 1082, 3316, 4426, 4446, 4608
AjnI CCWGG 5 cut(s) 1108, 1550, 2642, 3658, 4641
AjuI GAANNNNNNNTTGG 4 cut(s) 939, 971, 2309, 2341
AleI CACNNNNGTG 1 cut(s) 1727
Alw21I GWGCWC 3 cut(s) 2446, 4032, 4134
Alw26I GTCTC 5 cut(s) 1072, 1611, 2054, 2141, 3739
AlwI GGATC 8 cut(s) 350, 363, 974, 987, 1625, 3814, 3818, 4427
AlwNI CAGNNNCTG 1 cut(s) 1268
Ama87I CYCGRG 2 cut(s) 1903, 2121
Aor51HI AGCGCT 1 cut(s) 3409
AsiGI ACCGGT 1 cut(s) 4508
Asp700I GAANNNNTTC 4 cut(s) 330, 801, 1044, 2051
AspLEI GCGC 4 cut(s) 372, 3331, 3410, 4474
AspS9I GGNCC 3 cut(s) 1237, 3663, 3902
AsuHPI GGTGA 9 cut(s) 722, 865, 1513, 1561, 1954, 3659, 3724, 4433, 4453
AsuII TTCGAA 2 cut(s) 2271, 2530
AvaI CYCGRG 2 cut(s) 1903, 2121
AvaII GGWCC 3 cut(s) 1237, 3663, 3902
BaeGI GKGCMC 1 cut(s) 4178
BalI TGGCCA 2 cut(s) 2540, 2611
BamHI GGATCC 2 cut(s) 355, 979
BanI GGYRCC 2 cut(s) 903, 1998
BarI GAAGNNNNNNTAC 2 cut(s) 3422, 3454
BbrPI CACGTG 1 cut(s) 352
BbsI GAAGAC 9 cut(s) 96, 1314, 1392, 1439, 1680, 2043, 2289, 3459, 4020
Bbv12I GWGCWC 3 cut(s) 2446, 4032, 4134
BbvCI CCTCAGC 1 cut(s) 2277
BccI CCATC 8 cut(s) 1107, 1297, 2516, 2564, 2616, 3082, 3338, 3736
BceAI ACGGC 1 cut(s) 36
BcgI CGANNNNNNTGC 2 cut(s) 3683, 3717
BciT130I CCWGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
BclI TGATCA 1 cut(s) 622
BcoDI GTCTC 5 cut(s) 1072, 1611, 2054, 2141, 3739
BcuI ACTAGT 3 cut(s) 173, 1183, 3883
BfmI CTRYAG 3 cut(s) 550, 1194, 4623
BfoI RGCGCY 3 cut(s) 3332, 3411, 4475
BfrI CTTAAG 2 cut(s) 2963, 2993
BfuAI ACCTGC 1 cut(s) 4519
BglII AGATCT 2 cut(s) 2374, 4120
BmcAI AGTACT 1 cut(s) 4454
Bme1390I CCNGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
Bme18I GGWCC 3 cut(s) 1237, 3663, 3902
BmeRI GACNNNNNGTC 1 cut(s) 524
BmeT110I CYCGRG 2 cut(s) 1903, 2121
BmgBI CACGTC 5 cut(s) 1082, 3316, 4426, 4446, 4608
BmgT120I GGNCC 3 cut(s) 1237, 3663, 3902
BmiI GGNNCC 8 cut(s) 48, 357, 905, 981, 2000, 3527, 3664, 3665
BmrFI CCNGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
BmrI ACTGGG 1 cut(s) 1914
BmuI ACTGGG 1 cut(s) 1914
BpiI GAAGAC 9 cut(s) 96, 1314, 1392, 1439, 1680, 2043, 2289, 3459, 4020
BplI GAGNNNNNCTC 2 cut(s) 2024, 2056
BpmI CTGGAG 1 cut(s) 4196
Bpu10I CCTNAGC 2 cut(s) 2277, 2822
Bpu14I TTCGAA 2 cut(s) 2271, 2530
BpuEI CTTGAG 5 cut(s) 677, 2366, 3614, 3662, 3862
BsaAI YACGTR 2 cut(s) 352, 1367
BsaHI GRCGYC 3 cut(s) 459, 2063, 3045
BsaI GGTCTC 1 cut(s) 2141
BsaWI WCCGGW 3 cut(s) 4126, 4396, 4508
BsaXI ACNNNNNCTCC 6 cut(s) 31, 61, 4391, 4421, 4487, 4517
Bsc4I CCNNNNNNNGG 7 cut(s) 1358, 1460, 2564, 2618, 3033, 3325, 4183
Bse118I RCCGGY 3 cut(s) 4508, 4587, 4628
Bse1I ACTGG 9 cut(s) 273, 338, 1920, 2851, 3027, 3055, 3205, 3581, 4213
Bse3DI GCAATG 3 cut(s) 1776, 1984, 2547
BseBI CCWGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
BseLI CCNNNNNNNGG 7 cut(s) 1358, 1460, 2564, 2618, 3033, 3325, 4183
BseMI GCAATG 3 cut(s) 1776, 1984, 2547
BseMII CTCAG 4 cut(s) 498, 978, 2268, 4161
BseNI ACTGG 9 cut(s) 273, 338, 1920, 2851, 3027, 3055, 3205, 3581, 4213
BseRI GAGGAG 4 cut(s) 201, 663, 2618, 4395
BseSI GKGCMC 1 cut(s) 4178
BseX3I CGGCCG 1 cut(s) 1637
BseYI CCCAGC 3 cut(s) 489, 1251, 1261
BsgI GTGCAG 5 cut(s) 390, 1195, 3098, 3596, 4129
Bsh1236I CGCG 3 cut(s) 539, 3913, 4563
Bsh1285I CGRYCG 2 cut(s) 1640, 4509
BshNI GGYRCC 2 cut(s) 903, 1998
BshTI ACCGGT 1 cut(s) 4508
BsiEI CGRYCG 2 cut(s) 1640, 4509
BsiHKAI GWGCWC 3 cut(s) 2446, 4032, 4134
BsiHKCI CYCGRG 2 cut(s) 1903, 2121
BsiSI CCGG 7 cut(s) 2775, 4127, 4355, 4397, 4509, 4588, 4629
BslFI GGGAC 5 cut(s) 470, 721, 1783, 3302, 3649
BslI CCNNNNNNNGG 7 cut(s) 1358, 1460, 2564, 2618, 3033, 3325, 4183
BsmAI GTCTC 5 cut(s) 1072, 1611, 2054, 2141, 3739
BsmBI CGTCTC 3 cut(s) 1072, 1611, 2054
BsmFI GGGAC 5 cut(s) 470, 721, 1783, 3302, 3649
BsmI GAATGC 4 cut(s) 938, 2132, 2526, 3721
Bso31I GGTCTC 1 cut(s) 2141
BsoBI CYCGRG 2 cut(s) 1903, 2121
Bsp119I TTCGAA 2 cut(s) 2271, 2530
Bsp1286I GDGCHC 4 cut(s) 2446, 4032, 4134, 4178
Bsp1407I TGTACA 3 cut(s) 120, 643, 1030
Bsp19I CCATGG 1 cut(s) 3484
BspCNI CTCAG 4 cut(s) 499, 979, 2269, 4162
BspFNI CGCG 3 cut(s) 539, 3913, 4563
BspHI TCATGA 4 cut(s) 1057, 1534, 2080, 2697
BspLI GGNNCC 8 cut(s) 48, 357, 905, 981, 2000, 3527, 3664, 3665
BspMAI CTGCAG 2 cut(s) 554, 4627
BspMI ACCTGC 1 cut(s) 4519
BspPI GGATC 8 cut(s) 350, 363, 974, 987, 1625, 3814, 3818, 4427
BspQI GCTCTTC 1 cut(s) 408
BspT104I TTCGAA 2 cut(s) 2271, 2530
BspT107I GGYRCC 2 cut(s) 903, 1998
BspTI CTTAAG 2 cut(s) 2963, 2993
BspTNI GGTCTC 1 cut(s) 2141
BsrBI CCGCTC 1 cut(s) 395
BsrDI GCAATG 3 cut(s) 1776, 1984, 2547
BsrFI RCCGGY 3 cut(s) 4508, 4587, 4628
BsrGI TGTACA 3 cut(s) 120, 643, 1030
BsrI ACTGG 9 cut(s) 273, 338, 1920, 2851, 3027, 3055, 3205, 3581, 4213
BssAI RCCGGY 3 cut(s) 4508, 4587, 4628
BssNI GRCGYC 3 cut(s) 459, 2063, 3045
BssT1I CCWWGG 4 cut(s) 6, 50, 399, 3484
Bst2UI CCWGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
Bst4CI ACNGT 8 cut(s) 784, 1709, 1774, 2492, 3393, 3530, 4034, 4407
Bst6I CTCTTC 4 cut(s) 408, 843, 3594, 3980
BstACI GRCGYC 3 cut(s) 459, 2063, 3045
BstAFI CTTAAG 2 cut(s) 2963, 2993
BstAPI GCANNNNNTGC 1 cut(s) 1983
BstAUI TGTACA 3 cut(s) 120, 643, 1030
BstBAI YACGTR 2 cut(s) 352, 1367
BstBI TTCGAA 2 cut(s) 2271, 2530
BstC8I GCNNGC 5 cut(s) 1167, 3250, 3254, 3674, 4063
BstDSI CCRYGG 3 cut(s) 3484, 4406, 4561
BstFNI CGCG 3 cut(s) 539, 3913, 4563
BstH2I RGCGCY 3 cut(s) 3332, 3411, 4475
BstHHI GCGC 4 cut(s) 372, 3331, 3410, 4474
BstMAI GTCTC 5 cut(s) 1072, 1611, 2054, 2141, 3739
BstMCI CGRYCG 2 cut(s) 1640, 4509
BstNI CCWGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
BstNSI RCATGY 2 cut(s) 3252, 3277
BstSCI CCNGG 5 cut(s) 1108, 1550, 2642, 3658, 4641
BstSFI CTRYAG 3 cut(s) 550, 1194, 4623
BstSLI GKGCMC 1 cut(s) 4178
BstSNI TACGTA 1 cut(s) 1367
BstUI CGCG 3 cut(s) 539, 3913, 4563
BstV2I GAAGAC 9 cut(s) 96, 1314, 1392, 1439, 1680, 2043, 2289, 3459, 4020
BstX2I RGATCY 7 cut(s) 355, 979, 1630, 2374, 3806, 4120, 4432
BstXI CCANNNNNNTGG 1 cut(s) 4350
BstYI RGATCY 7 cut(s) 355, 979, 1630, 2374, 3806, 4120, 4432
BstZI CGGCCG 1 cut(s) 1637
BtgI CCRYGG 3 cut(s) 3484, 4406, 4561
BtgZI GCGATG 1 cut(s) 2583
BtrI CACGTC 5 cut(s) 1082, 3316, 4426, 4446, 4608
BtsI GCAGTG 3 cut(s) 314, 3613, 4418
BtsIMutI CAGTG 8 cut(s) 314, 2844, 3048, 3500, 3613, 4030, 4146, 4418
BveI ACCTGC 1 cut(s) 4519
Cac8I GCNNGC 5 cut(s) 1167, 3250, 3254, 3674, 4063
CaiI CAGNNNCTG 1 cut(s) 1268
CciI TCATGA 4 cut(s) 1057, 1534, 2080, 2697
CfoI GCGC 4 cut(s) 372, 3331, 3410, 4474
Cfr10I RCCGGY 3 cut(s) 4508, 4587, 4628
Cfr13I GGNCC 3 cut(s) 1237, 3663, 3902
Cfr42I CCGCGG 1 cut(s) 4564
CseI GACGC 3 cut(s) 467, 1593, 2294
Csp6I GTAC 9 cut(s) 121, 644, 1031, 2461, 3271, 3439, 4158, 4394, 4453
CspAI ACCGGT 1 cut(s) 4508
CviQI GTAC 9 cut(s) 121, 644, 1031, 2461, 3271, 3439, 4158, 4394, 4453
DraI TTTAAA 2 cut(s) 424, 3216
DraIII CACNNNGTG 1 cut(s) 4664
DriI GACNNNNNGTC 1 cut(s) 524
EaeI YGGCCR 5 cut(s) 1637, 2538, 2609, 4352, 4585
EagI CGGCCG 1 cut(s) 1637
Eam1104I CTCTTC 4 cut(s) 408, 843, 3594, 3980
Eam1105I GACNNNNNGTC 1 cut(s) 524
EarI CTCTTC 4 cut(s) 408, 843, 3594, 3980
EciI GGCGGA 2 cut(s) 829, 1599
EclXI CGGCCG 1 cut(s) 1637
Eco105I TACGTA 1 cut(s) 1367
Eco130I CCWWGG 4 cut(s) 6, 50, 399, 3484
Eco31I GGTCTC 1 cut(s) 2141
Eco32I GATATC 4 cut(s) 163, 2362, 3059, 3087
Eco47I GGWCC 3 cut(s) 1237, 3663, 3902
Eco47III AGCGCT 1 cut(s) 3409
Eco52I CGGCCG 1 cut(s) 1637
Eco57I CTGAAG 4 cut(s) 384, 1104, 4115, 4170
Eco72I CACGTG 1 cut(s) 352
Eco88I CYCGRG 2 cut(s) 1903, 2121
EcoO109I RGGNCCY 1 cut(s) 3663
EcoRI GAATTC 2 cut(s) 954, 1914
EcoRII CCWGG 5 cut(s) 1108, 1550, 2642, 3658, 4641
EcoRV GATATC 4 cut(s) 163, 2362, 3059, 3087
EcoT14I CCWWGG 4 cut(s) 6, 50, 399, 3484
EcoT22I ATGCAT 2 cut(s) 938, 3305
ErhI CCWWGG 4 cut(s) 6, 50, 399, 3484
Esp3I CGTCTC 3 cut(s) 1072, 1611, 2054
FalI AAGNNNNNCTT 6 cut(s) 1377, 1409, 1569, 1601, 2309, 2341
FaqI GGGAC 5 cut(s) 470, 721, 1783, 3302, 3649
FauI CCCGC 2 cut(s) 93, 4556
FauNDI CATATG 1 cut(s) 3893
FbaI TGATCA 1 cut(s) 622
FblI GTMKAC 5 cut(s) 575, 1180, 1193, 1202, 4505
GlaI GCGC 4 cut(s) 371, 3330, 3409, 4473
GsaI CCCAGC 3 cut(s) 493, 1255, 1265
GsuI CTGGAG 1 cut(s) 4196
HaeII RGCGCY 3 cut(s) 3332, 3411, 4475
HapII CCGG 7 cut(s) 2775, 4127, 4355, 4397, 4509, 4588, 4629
HgaI GACGC 3 cut(s) 467, 1593, 2294
HhaI GCGC 4 cut(s) 372, 3331, 3410, 4474
Hin1I GRCGYC 3 cut(s) 459, 2063, 3045
Hin6I GCGC 4 cut(s) 370, 3329, 3408, 4472
HinP1I GCGC 4 cut(s) 370, 3329, 3408, 4472
HincII GTYRAC 6 cut(s) 576, 1203, 1836, 2266, 3198, 4506
HindII GTYRAC 6 cut(s) 576, 1203, 1836, 2266, 3198, 4506
HindIII AAGCTT 3 cut(s) 2708, 2717, 3385
HpaII CCGG 7 cut(s) 2775, 4127, 4355, 4397, 4509, 4588, 4629
HphI GGTGA 9 cut(s) 722, 865, 1513, 1561, 1954, 3659, 3724, 4433, 4453
Hpy99I CGWCG 3 cut(s) 170, 580, 2068
HpyCH4III ACNGT 8 cut(s) 784, 1709, 1774, 2492, 3393, 3530, 4034, 4407
Hsp92I GRCGYC 3 cut(s) 459, 2063, 3045
HspAI GCGC 4 cut(s) 370, 3329, 3408, 4472
KflI GGGWCCC 1 cut(s) 3663
Ksp22I TGATCA 1 cut(s) 622
KspI CCGCGG 1 cut(s) 4564
LguI GCTCTTC 1 cut(s) 408
LmnI GCTCC 9 cut(s) 52, 392, 676, 1270, 2260, 3336, 3913, 4399, 4574
MbiI CCGCTC 1 cut(s) 395
MfeI CAATTG 1 cut(s) 2367
MflI RGATCY 7 cut(s) 355, 979, 1630, 2374, 3806, 4120, 4432
MhlI GDGCHC 4 cut(s) 2446, 4032, 4134, 4178
MlsI TGGCCA 2 cut(s) 2540, 2611
MluNI TGGCCA 2 cut(s) 2540, 2611
MlyI GAGTC 4 cut(s) 1208, 2033, 3358, 4059
MmeI TCCRAC 6 cut(s) 553, 659, 3021, 3189, 3990, 4346
Mox20I TGGCCA 2 cut(s) 2540, 2611
Mph1103I ATGCAT 2 cut(s) 938, 3305
MroXI GAANNNNTTC 4 cut(s) 330, 801, 1044, 2051
MscI TGGCCA 2 cut(s) 2540, 2611
MslI CAYNNNNRTG 3 cut(s) 901, 1727, 4263
Msp20I TGGCCA 2 cut(s) 2540, 2611
MspA1I CMGCKG 4 cut(s) 1457, 1622, 2159, 4563
MspCI CTTAAG 2 cut(s) 2963, 2993
MspI CCGG 7 cut(s) 2775, 4127, 4355, 4397, 4509, 4588, 4629
MspR9I CCNGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
MunI CAATTG 1 cut(s) 2367
Mva1269I GAATGC 4 cut(s) 938, 2132, 2526, 3721
MvaI CCWGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
MvnI CGCG 3 cut(s) 539, 3913, 4563
NcoI CCATGG 1 cut(s) 3484
NdeI CATATG 1 cut(s) 3893
NlaIV GGNNCC 8 cut(s) 48, 357, 905, 981, 2000, 3527, 3664, 3665
NmeAIII GCCGAG 2 cut(s) 76, 1615
NmuCI GTSAC 9 cut(s) 1519, 1922, 2166, 2783, 2856, 3046, 3412, 4421, 4441
NsiI ATGCAT 2 cut(s) 938, 3305
NspI RCATGY 2 cut(s) 3252, 3277
NspV TTCGAA 2 cut(s) 2271, 2530
OliI CACNNNNGTG 1 cut(s) 1727
PaeI GCATGC 1 cut(s) 3252
PaeR7I CTCGAG 2 cut(s) 1903, 2121
PagI TCATGA 4 cut(s) 1057, 1534, 2080, 2697
PciSI GCTCTTC 1 cut(s) 408
PctI GAATGC 4 cut(s) 938, 2132, 2526, 3721
PdmI GAANNNNTTC 4 cut(s) 330, 801, 1044, 2051
PfeI GAWTC 9 cut(s) 11, 227, 1808, 1988, 2084, 2909, 2968, 3928, 4638
PflFI GACNNNGTC 1 cut(s) 4049
PflMI CCANNNNNTGG 1 cut(s) 1460
PfoI TCCNGGA 1 cut(s) 2642
PinAI ACCGGT 1 cut(s) 4508
PleI GAGTC 4 cut(s) 1207, 2033, 3358, 4058
PmaCI CACGTG 1 cut(s) 352
PmlI CACGTG 1 cut(s) 352
PpsI GAGTC 4 cut(s) 1207, 2033, 3358, 4058
Ppu21I YACGTR 2 cut(s) 352, 1367
PpuMI RGGWCCY 1 cut(s) 3663
PsiI TTATAA 2 cut(s) 698, 1868
Psp5II RGGWCCY 1 cut(s) 3663
Psp6I CCWGG 5 cut(s) 1108, 1550, 2642, 3658, 4641
PspCI CACGTG 1 cut(s) 352
PspFI CCCAGC 3 cut(s) 489, 1251, 1261
PspGI CCWGG 5 cut(s) 1108, 1550, 2642, 3658, 4641
PspN4I GGNNCC 8 cut(s) 48, 357, 905, 981, 2000, 3527, 3664, 3665
PspPI GGNCC 3 cut(s) 1237, 3663, 3902
PspPPI RGGWCCY 1 cut(s) 3663
PstI CTGCAG 2 cut(s) 554, 4627
PstNI CAGNNNCTG 1 cut(s) 1268
PsuI RGATCY 7 cut(s) 355, 979, 1630, 2374, 3806, 4120, 4432
PsyI GACNNNGTC 1 cut(s) 4049
PvuII CAGCTG 3 cut(s) 1457, 1622, 2159
RsaI GTAC 9 cut(s) 122, 645, 1032, 2462, 3272, 3440, 4159, 4395, 4454
RsaNI GTAC 9 cut(s) 121, 644, 1031, 2461, 3271, 3439, 4158, 4394, 4453
RseI CAYNNNNRTG 3 cut(s) 901, 1727, 4263
SacII CCGCGG 1 cut(s) 4564
SalI GTCGAC 3 cut(s) 574, 1201, 4504
SapI GCTCTTC 1 cut(s) 408
Sau96I GGNCC 3 cut(s) 1237, 3663, 3902
ScaI AGTACT 1 cut(s) 4454
SchI GAGTC 4 cut(s) 1208, 2033, 3358, 4059
ScrFI CCNGG 5 cut(s) 1110, 1552, 2644, 3660, 4643
SduI GDGCHC 4 cut(s) 2446, 4032, 4134, 4178
SfcI CTRYAG 3 cut(s) 550, 1194, 4623
Sfr274I CTCGAG 2 cut(s) 1903, 2121
Sfr303I CCGCGG 1 cut(s) 4564
SfuI TTCGAA 2 cut(s) 2271, 2530
SgrBI CCGCGG 1 cut(s) 4564
SinI GGWCC 3 cut(s) 1237, 3663, 3902
SlaI CTCGAG 2 cut(s) 1903, 2121
SmiMI CAYNNNNRTG 3 cut(s) 901, 1727, 4263
SmlI CTYRAG 9 cut(s) 656, 1903, 2121, 2381, 2963, 2993, 3629, 3677, 3841
SmoI CTYRAG 9 cut(s) 656, 1903, 2121, 2381, 2963, 2993, 3629, 3677, 3841
SnaBI TACGTA 1 cut(s) 1367
SpeI ACTAGT 3 cut(s) 173, 1183, 3883
SphI GCATGC 1 cut(s) 3252
SspI AATATT 3 cut(s) 1872, 2729, 3835
StyD4I CCNGG 5 cut(s) 1108, 1550, 2642, 3658, 4641
StyI CCWWGG 4 cut(s) 6, 50, 399, 3484
TaaI ACNGT 8 cut(s) 784, 1709, 1774, 2492, 3393, 3530, 4034, 4407
TatI WGTACW 6 cut(s) 120, 643, 1030, 3270, 3438, 4452
TauI GCSGC 2 cut(s) 398, 3248
TfiI GAWTC 9 cut(s) 11, 227, 1808, 1988, 2084, 2909, 2968, 3928, 4638
TscAI CASTG 8 cut(s) 314, 2851, 3055, 3507, 3620, 4037, 4153, 4418
TseFI GTSAC 9 cut(s) 1519, 1922, 2166, 2783, 2856, 3046, 3412, 4421, 4441
Tsp45I GTSAC 9 cut(s) 1519, 1922, 2166, 2783, 2856, 3046, 3412, 4421, 4441
TspGWI ACGGA 3 cut(s) 183, 593, 2926
TspRI CASTG 8 cut(s) 314, 2851, 3055, 3507, 3620, 4037, 4153, 4418
Tth111I GACNNNGTC 1 cut(s) 4049
Van91I CCANNNNNTGG 1 cut(s) 1460
Vha464I CTTAAG 2 cut(s) 2963, 2993
VpaK11BI GGWCC 3 cut(s) 1237, 3663, 3902
XbaI TCTAGA 1 cut(s) 2474
XceI RCATGY 2 cut(s) 3252, 3277
XcmI CCANNNNNNNNNTGG 4 cut(s) 280, 1269, 2619, 4384
XhoI CTCGAG 2 cut(s) 1903, 2121
XmiI GTMKAC 5 cut(s) 575, 1180, 1193, 1202, 4505
XmnI GAANNNNTTC 4 cut(s) 330, 801, 1044, 2051
ZraI GACGTC 2 cut(s) 2064, 3046
ZrmI AGTACT 1 cut(s) 4454
Zsp2I ATGCAT 2 cut(s) 938, 3305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.