Rorug05G0459900

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Reverse (-)
63313691 .. 63320463
6773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0459900.1

Sequence Viewer

Length: 1443 bp
ATGACTAGCGTGTTATCTGATCTGATCAATACTGAAGATCTCCTCAAGACTGATCTGATCAGCACTGAGAATGAAAACCAGGATGATGTGGTTGCTACTGAAACTGAGAGCCTGGAAGATGACCCAGTTCAAACAATTTTAGACGGGTTCAAGCACTTCAAGACCAACTTTTACGACACAAATCCAGAGTTGTTCAATGAGCTTGCCCTAGCACAAAGCCCCAAGAGAGTAATTATGGCTCTCTCTCTGACTCTCTCACGAGAGTATGGCCGCTCGCGGCTATCTAACCCTAGTGGCGGCGGTGAACCTACGATCGAGAAGGTGGGTTATCCCCTCTTCTCTGTTCGCTCTTCTGGTGACGGTGATGGATTTCTGTTTCATCATGTCCCCGATCTTGCTTCATCTGGCCGTCTTGTATTGACCAGAGGCATTTTTGCTCTATGGCCGGCGGGTTCTATTGGCGGTGGTCCTCTGATAACGGTTGCGAAAGCGGCGTGTCATGGTTTTGAGTATATCAACGATGTGGGTTTGGCTGGGCAGATCGATGATGGTGGGAGGAGGGTGGATAGCGGGGCCTCTTGCTGTCTCCTTTTTCTGTCGATGTCAATCAAATCGAGGGTGGATCTCGATTTGGTGCTGATGGAGCCGAGTGTTGGTGGTCCTGCGGGGCAAGACGACCAATCTCAGATCGAGTGTTGTGGTGGCGATACTATTGCCAGGTGCTATGCAGGAATTGCGACTTCCCGGCTAGAGACAAGATTTGTTTTGTTCTCCTTGGGCCTGAAACCTCCGATTCTAGGCGGTGGTTTCCGGGTTTGGGATTTGGATGCGGCTATGTTTTGGTCTAGTTGCAAGAAGGGATTCAAGGAGGACGGCGGCGCTGCAAGTGGCGGCGGCGGCGGTGTGGTGATGGAAAAATTTTTGGTATTTGCATGCTCGGATTCCCGAGTGAGTCCCTCGCATGTTCTTCATTGCACACCTGGACAAGCCTTTCTGGTTCGCAACATTGCTAACATGGTTCCTGCATATGACCAGCTAAGGTACACAGGAACTGGAGCAACCATTGAGTATGCTGTAGAAGAACTCGGGGTAGGAAACATTTTGATAGTGGGACACAGTAGTTGCGGAGGAATAAGAAGGCTAATGTCTTATCCCGAGGATGGTTCCGCTCCACTGGTCTTTATAGATGATTGGATGAAAACGGCTTTACCTGTCAAGACAAAGGTTATTGCGGAAGCTGGCGATACCGATTTCCAGGAACAATGTGATCGTTGCGCAAGGAAAGCAGTAAATTTGTCATTTGCAAACCTACTCACATATCCCTTCGTTCAAGAGGCACACTCGGAGAAAAAACTAGCACTTCGGGGTGCTTACTATGACTTTGTCAACGGACGTTTCGAGCTCTGGGAGCATGGTTCCGACAATATCATCATAGCACCTTAG

Protein Analysis

480

Amino Acids

51.74

Weight (kDa)

4.88

Isoelectric Point (pI)

52.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_CA PF00484 308 - 465 1.9e-40 Carbonic anhydrase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1276
AccBSI CCGCTC 2 cut(s) 273, 1169
AccII CGCG 1 cut(s) 277
AclWI GGATC 1 cut(s) 630
AcoI YGGCCR 3 cut(s) 268, 406, 443
AcsI RAATTY 2 cut(s) 917, 1291
AcuI CTGAAG 1 cut(s) 54
AfaI GTAC 1 cut(s) 1043
AfiI CCNNNNNNNGG 5 cut(s) 296, 653, 797, 817, 1160
AgsI TTSAA 6 cut(s) 131, 151, 160, 196, 865, 1331
AjnI CCWGG 5 cut(s) 78, 111, 716, 979, 1254
AluBI AGCT 4 cut(s) 202, 1036, 1238, 1402
AluI AGCT 4 cut(s) 202, 1036, 1238, 1402
Alw21I GWGCWC 1 cut(s) 1404
Alw26I GTCTC 2 cut(s) 590, 746
AlwI GGATC 1 cut(s) 630
AlwNI CAGNNNCTG 1 cut(s) 1052
Ama87I CYCGRG 3 cut(s) 945, 1085, 1154
AoxI GGCC 5 cut(s) 268, 406, 443, 573, 778
ApeKI GCWGC 1 cut(s) 881
ApoI RAATTY 2 cut(s) 917, 1291
Asp700I GAANNNNTTC 1 cut(s) 860
AspLEI GCGC 2 cut(s) 881, 1277
AspS9I GGNCC 4 cut(s) 467, 573, 659, 778
AsuC2I CCSGG 2 cut(s) 745, 812
AsuHPI GGTGA 4 cut(s) 314, 368, 374, 919
AvaI CYCGRG 3 cut(s) 945, 1085, 1154
AvaII GGWCC 2 cut(s) 467, 659
BanII GRGCYC 1 cut(s) 1404
BauI CACGAG 1 cut(s) 258
Bbv12I GWGCWC 1 cut(s) 1404
BbvI GCAGC 1 cut(s) 868
BccI CCATC 5 cut(s) 359, 542, 634, 904, 1154
BceAI ACGGC 3 cut(s) 393, 889, 1218
BcgI CGANNNNNNTGC 2 cut(s) 695, 729
BciT130I CCWGG 5 cut(s) 80, 113, 718, 981, 1256
BclI TGATCA 2 cut(s) 24, 57
BcnI CCSGG 2 cut(s) 745, 812
BcoDI GTCTC 2 cut(s) 590, 746
BfaI CTAG 7 cut(s) 6, 209, 291, 749, 797, 846, 1355
BfmI CTRYAG 1 cut(s) 1074
BfoI RGCGCY 1 cut(s) 882
BglII AGATCT 1 cut(s) 37
Bme1390I CCNGG 7 cut(s) 80, 113, 718, 745, 812, 981, 1256
Bme18I GGWCC 2 cut(s) 467, 659
BmeT110I CYCGRG 3 cut(s) 945, 1085, 1154
BmgT120I GGNCC 4 cut(s) 467, 573, 659, 778
BmiI GGNNCC 5 cut(s) 574, 645, 1020, 1165, 1417
BmrFI CCNGG 7 cut(s) 80, 113, 718, 745, 812, 981, 1256
BmrI ACTGGG 1 cut(s) 119
BmsI GCATC 1 cut(s) 817
BmuI ACTGGG 1 cut(s) 119
BplI GAGNNNNNCTC 2 cut(s) 1325, 1357
BpmI CTGGAG 1 cut(s) 1074
Bpu10I CCTNAGC 1 cut(s) 1037
BpuEI CTTGAG 1 cut(s) 29
BpuMI CCSGG 2 cut(s) 745, 812
Bsa29I ATCGAT 1 cut(s) 543
BsaBI GATNNNNATC 1 cut(s) 605
BsaJI CCNNGG 2 cut(s) 774, 1155
Bsc4I CCNNNNNNNGG 5 cut(s) 296, 653, 797, 817, 1160
Bse118I RCCGGY 1 cut(s) 445
Bse1I ACTGG 3 cut(s) 125, 1057, 1179
Bse3DI GCAATG 2 cut(s) 970, 1005
Bse8I GATNNNNATC 1 cut(s) 605
BseBI CCWGG 5 cut(s) 80, 113, 718, 981, 1256
BseCI ATCGAT 1 cut(s) 543
BseDI CCNNGG 2 cut(s) 774, 1155
BseGI GGATG 4 cut(s) 88, 832, 1165, 1200
BseJI GATNNNNATC 1 cut(s) 605
BseLI CCNNNNNNNGG 5 cut(s) 296, 653, 797, 817, 1160
BseMI GCAATG 2 cut(s) 970, 1005
BseMII CTCAG 3 cut(s) 57, 96, 698
BseNI ACTGG 3 cut(s) 125, 1057, 1179
BseRI GAGGAG 2 cut(s) 32, 571
BseXI GCAGC 1 cut(s) 868
BseYI CCCAGC 1 cut(s) 533
Bsh1236I CGCG 1 cut(s) 277
Bsh1285I CGRYCG 1 cut(s) 315
BshFI GGCC 5 cut(s) 270, 408, 445, 575, 780
BshVI ATCGAT 1 cut(s) 543
BsiEI CGRYCG 1 cut(s) 315
BsiHKAI GWGCWC 1 cut(s) 1404
BsiHKCI CYCGRG 3 cut(s) 945, 1085, 1154
BsiSI CCGG 3 cut(s) 446, 745, 811
BslFI GGGAC 3 cut(s) 371, 939, 1125
BslI CCNNNNNNNGG 5 cut(s) 296, 653, 797, 817, 1160
BsmAI GTCTC 2 cut(s) 590, 746
BsmFI GGGAC 3 cut(s) 371, 939, 1125
BsnI GGCC 5 cut(s) 270, 408, 445, 575, 780
BsoBI CYCGRG 3 cut(s) 945, 1085, 1154
Bsp1286I GDGCHC 1 cut(s) 1404
BspANI GGCC 5 cut(s) 270, 408, 445, 575, 780
BspCNI CTCAG 3 cut(s) 58, 97, 697
BspDI ATCGAT 1 cut(s) 543
BspFNI CGCG 1 cut(s) 277
BspLI GGNNCC 5 cut(s) 574, 645, 1020, 1165, 1417
BspPI GGATC 1 cut(s) 630
BspQI GCTCTTC 1 cut(s) 355
BsrBI CCGCTC 2 cut(s) 273, 1169
BsrDI GCAATG 2 cut(s) 970, 1005
BsrFI RCCGGY 1 cut(s) 445
BsrI ACTGG 3 cut(s) 125, 1057, 1179
BssAI RCCGGY 1 cut(s) 445
BssECI CCNNGG 2 cut(s) 774, 1155
BssSI CACGAG 1 cut(s) 258
BssT1I CCWWGG 1 cut(s) 774
Bst2BI CACGAG 1 cut(s) 258
Bst2UI CCWGG 5 cut(s) 80, 113, 718, 981, 1256
Bst4CI ACNGT 3 cut(s) 362, 481, 1118
Bst6I CTCTTC 2 cut(s) 341, 355
BstAPI GCANNNNNTGC 1 cut(s) 734
BstC8I GCNNGC 5 cut(s) 204, 275, 447, 934, 1240
BstDEI CTNAG 5 cut(s) 66, 105, 684, 1037, 1440
BstF5I GGATG 4 cut(s) 88, 832, 1165, 1200
BstFNI CGCG 1 cut(s) 277
BstH2I RGCGCY 1 cut(s) 882
BstHHI GCGC 2 cut(s) 881, 1277
BstMAI GTCTC 2 cut(s) 590, 746
BstMCI CGRYCG 1 cut(s) 315
BstMWI GCNNNNNNNGC 6 cut(s) 491, 643, 734, 897, 1283, 1408
BstNI CCWGG 5 cut(s) 80, 113, 718, 981, 1256
BstNSI RCATGY 2 cut(s) 936, 965
BstSCI CCNGG 7 cut(s) 78, 111, 716, 743, 810, 979, 1254
BstSFI CTRYAG 1 cut(s) 1074
BstUI CGCG 1 cut(s) 277
BstV1I GCAGC 1 cut(s) 868
BstX2I RGATCY 2 cut(s) 37, 622
BstYI RGATCY 2 cut(s) 37, 622
Bsu15I ATCGAT 1 cut(s) 543
BsuRI GGCC 5 cut(s) 270, 408, 445, 575, 780
BsuTUI ATCGAT 1 cut(s) 543
BtsCI GGATG 4 cut(s) 88, 832, 1165, 1200
BtsIMutI CAGTG 2 cut(s) 63, 1172
Cac8I GCNNGC 5 cut(s) 204, 275, 447, 934, 1240
CaiI CAGNNNCTG 1 cut(s) 1052
CfoI GCGC 2 cut(s) 881, 1277
Cfr10I RCCGGY 1 cut(s) 445
Cfr13I GGNCC 4 cut(s) 467, 573, 659, 778
ClaI ATCGAT 1 cut(s) 543
Csp6I GTAC 1 cut(s) 1042
CviAII CATG 6 cut(s) 383, 500, 933, 962, 1015, 1412
CviQI GTAC 1 cut(s) 1042
DdeI CTNAG 5 cut(s) 66, 105, 684, 1037, 1440
EaeI YGGCCR 3 cut(s) 268, 406, 443
Eam1104I CTCTTC 2 cut(s) 341, 355
EarI CTCTTC 2 cut(s) 341, 355
Ecl136II GAGCTC 1 cut(s) 1402
Eco130I CCWWGG 1 cut(s) 774
Eco24I GRGCYC 1 cut(s) 1404
Eco47I GGWCC 2 cut(s) 467, 659
Eco53kI GAGCTC 1 cut(s) 1402
Eco57I CTGAAG 1 cut(s) 54
Eco88I CYCGRG 3 cut(s) 945, 1085, 1154
EcoICRI GAGCTC 1 cut(s) 1402
EcoO109I RGGNCCY 1 cut(s) 573
EcoRII CCWGG 5 cut(s) 78, 111, 716, 979, 1254
EcoT14I CCWWGG 1 cut(s) 774
EcoT38I GRGCYC 1 cut(s) 1404
ErhI CCWWGG 1 cut(s) 774
FaeI CATG 6 cut(s) 386, 503, 936, 965, 1018, 1415
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 3 cut(s) 371, 939, 1125
FatI CATG 6 cut(s) 382, 499, 932, 961, 1014, 1411
FauI CCCGC 3 cut(s) 442, 563, 658
FauNDI CATATG 1 cut(s) 1027
FbaI TGATCA 2 cut(s) 24, 57
FokI GGATG 4 cut(s) 95, 839, 1172, 1207
FriOI GRGCYC 1 cut(s) 1404
FspBI CTAG 7 cut(s) 6, 209, 291, 749, 797, 846, 1355
FspI TGCGCA 1 cut(s) 1276
GlaI GCGC 2 cut(s) 880, 1276
GsaI CCCAGC 1 cut(s) 537
GsuI CTGGAG 1 cut(s) 1074
HaeII RGCGCY 1 cut(s) 882
HaeIII GGCC 5 cut(s) 270, 408, 445, 575, 780
HapII CCGG 3 cut(s) 446, 745, 811
HhaI GCGC 2 cut(s) 881, 1277
Hin1II CATG 6 cut(s) 386, 503, 936, 965, 1018, 1415
Hin6I GCGC 2 cut(s) 879, 1275
HinP1I GCGC 2 cut(s) 879, 1275
HincII GTYRAC 1 cut(s) 1387
HindII GTYRAC 1 cut(s) 1387
HinfI GANTC 5 cut(s) 250, 793, 861, 941, 952
HpaII CCGG 3 cut(s) 446, 745, 811
HphI GGTGA 4 cut(s) 314, 368, 374, 919
Hpy166II GTNNAC 3 cut(s) 305, 1044, 1387
Hpy8I GTNNAC 3 cut(s) 305, 1044, 1387
HpyAV CCTTC 4 cut(s) 313, 850, 1131, 1333
HpyCH4III ACNGT 3 cut(s) 362, 481, 1118
HpyCH4IV ACGT 1 cut(s) 1393
HpyCH4V TGCA 7 cut(s) 728, 852, 884, 932, 975, 1025, 1304
HpyF10VI GCNNNNNNNGC 6 cut(s) 491, 643, 734, 897, 1283, 1408
HpyF3I CTNAG 5 cut(s) 66, 105, 684, 1037, 1440
HpySE526I ACGT 1 cut(s) 1393
Hsp92II CATG 6 cut(s) 386, 503, 936, 965, 1018, 1415
HspAI GCGC 2 cut(s) 879, 1275
KroI GCCGGC 1 cut(s) 445
KroNI GCCGGC 1 cut(s) 447
Ksp22I TGATCA 2 cut(s) 24, 57
LguI GCTCTTC 1 cut(s) 355
LmnI GCTCC 4 cut(s) 643, 1055, 1174, 1408
Lsp1109I GCAGC 1 cut(s) 868
LweI GCATC 1 cut(s) 817
MaeI CTAG 7 cut(s) 6, 209, 291, 749, 797, 846, 1355
MaeII ACGT 1 cut(s) 1393
MaeIII GTNAC 1 cut(s) 356
MbiI CCGCTC 2 cut(s) 273, 1169
MboII GAAGA 6 cut(s) 47, 128, 328, 342, 959, 1091
MflI RGATCY 2 cut(s) 37, 622
MhlI GDGCHC 1 cut(s) 1404
MluCI AATT 5 cut(s) 135, 231, 732, 917, 1291
MlyI GAGTC 2 cut(s) 244, 961
MmeI TCCRAC 1 cut(s) 1443
MroNI GCCGGC 1 cut(s) 445
MroXI GAANNNNTTC 1 cut(s) 860
MspI CCGG 3 cut(s) 446, 745, 811
MspR9I CCNGG 7 cut(s) 80, 113, 718, 745, 812, 981, 1256
MvaI CCWGG 5 cut(s) 80, 113, 718, 981, 1256
MvnI CGCG 1 cut(s) 277
MwoI GCNNNNNNNGC 6 cut(s) 491, 643, 734, 897, 1283, 1408
NaeI GCCGGC 1 cut(s) 447
NciI CCSGG 2 cut(s) 745, 812
NdeI CATATG 1 cut(s) 1027
NgoMIV GCCGGC 1 cut(s) 445
NlaIII CATG 6 cut(s) 386, 503, 936, 965, 1018, 1415
NlaIV GGNNCC 5 cut(s) 574, 645, 1020, 1165, 1417
NmeAIII GCCGAG 1 cut(s) 672
NmuCI GTSAC 1 cut(s) 356
NsbI TGCGCA 1 cut(s) 1276
NspI RCATGY 2 cut(s) 936, 965
PaeI GCATGC 1 cut(s) 936
PciSI GCTCTTC 1 cut(s) 355
PcsI WCGNNNNNNNCGW 1 cut(s) 1395
PdiI GCCGGC 1 cut(s) 447
PdmI GAANNNNTTC 1 cut(s) 860
PfeI GAWTC 3 cut(s) 793, 861, 941
PflFI GACNNNGTC 1 cut(s) 1382
PfoI TCCNGGA 1 cut(s) 1254
Ple19I CGATCG 1 cut(s) 315
PleI GAGTC 2 cut(s) 244, 960
PpsI GAGTC 2 cut(s) 244, 960
Psp124BI GAGCTC 1 cut(s) 1404
Psp6I CCWGG 5 cut(s) 78, 111, 716, 979, 1254
PspFI CCCAGC 1 cut(s) 533
PspGI CCWGG 5 cut(s) 78, 111, 716, 979, 1254
PspN4I GGNNCC 5 cut(s) 574, 645, 1020, 1165, 1417
PspPI GGNCC 4 cut(s) 467, 573, 659, 778
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 2 cut(s) 37, 622
PsyI GACNNNGTC 1 cut(s) 1382
PvuI CGATCG 1 cut(s) 315
RsaI GTAC 1 cut(s) 1043
RsaNI GTAC 1 cut(s) 1042
SacI GAGCTC 1 cut(s) 1404
SapI GCTCTTC 1 cut(s) 355
Sau96I GGNCC 4 cut(s) 467, 573, 659, 778
SchI GAGTC 2 cut(s) 244, 961
ScrFI CCNGG 7 cut(s) 80, 113, 718, 745, 812, 981, 1256
SduI GDGCHC 1 cut(s) 1404
SfaNI GCATC 1 cut(s) 817
SfcI CTRYAG 1 cut(s) 1074
SinI GGWCC 2 cut(s) 467, 659
SmlI CTYRAG 1 cut(s) 44
SmoI CTYRAG 1 cut(s) 44
SphI GCATGC 1 cut(s) 936
Sse9I AATT 5 cut(s) 135, 231, 732, 917, 1291
SspMI CTAG 7 cut(s) 6, 209, 291, 749, 797, 846, 1355
SstI GAGCTC 1 cut(s) 1404
StyD4I CCNGG 7 cut(s) 78, 111, 716, 743, 810, 979, 1254
StyI CCWWGG 1 cut(s) 774
TaaI ACNGT 3 cut(s) 362, 481, 1118
TaiI ACGT 1 cut(s) 1396
TaqI TCGA 7 cut(s) 315, 543, 599, 614, 627, 690, 1398
TasI AATT 5 cut(s) 135, 231, 732, 917, 1291
TauI GCSGC 9 cut(s) 273, 280, 300, 494, 833, 879, 894, 897, 900
TfiI GAWTC 3 cut(s) 793, 861, 941
TscAI CASTG 2 cut(s) 70, 1179
TseFI GTSAC 1 cut(s) 356
TseI GCWGC 1 cut(s) 881
Tsp45I GTSAC 1 cut(s) 356
TspDTI ATGAA 5 cut(s) 87, 368, 390, 959, 1211
TspGWI ACGGA 1 cut(s) 1404
TspRI CASTG 2 cut(s) 70, 1179
Tth111I GACNNNGTC 1 cut(s) 1382
VpaK11BI GGWCC 2 cut(s) 467, 659
XapI RAATTY 2 cut(s) 917, 1291
XceI RCATGY 2 cut(s) 936, 965
XmnI GAANNNNTTC 1 cut(s) 860
XspI CTAG 7 cut(s) 6, 209, 291, 749, 797, 846, 1355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.