Rmu_sc0011921.1_g000001

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011921.1
OG0000085
Physical Location & Seq
Forward (+)
2635 .. 6224
3590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011921.1_g000001.1.cds

Sequence Viewer

Length: 3108 bp
atgactctgtctttccttttttgttcttctcgttctcgatcaaagccttcgagcaatgcaagtgcttctgcatctcatcccttacctgttagaccagatcctcagctcttggaagattctgaatcaaagcaacctaaggatgatctagtacgcttccatttcttgaagcaacccaagccatggatcacctacacaagcagttcctggaagcatgatgtgtttttgagctttaggggtgaagacacccgccatggtttcgtatctcatttatacgatgaattggaaagcaccggaagaattaaaacattcaaggatgaccgagggctgcaagcagggatgtcaatttctccaagtctcctcagggcgattgaagaatcaaagctggcaattgttgttttgtcgccaaactacgcttcttctccatggtgtttggatgagcttacacatatatttcaattcatggaaggcagagacagaattctgccaattttttatcatgtggatccagctgatgtacgacatcaaagggggagttttgcaacagctttcactaattatgaaagaaagtctaggcaaagcgcagaaaagttgtatcagtggagagctgccttaagacaagtggccaatatctctgggtggaatacaaagaactttgggtccgagagtgagcttgtcaaacgcattgcgaaagatgtcagcagtaaaacaacacttgaagttcaacaacggcccgtcgaaattgatattaccatcccgtccacccgagagtttagaatatttgaatcaacaagacaggccatggatgagctgattaaggcgctgatagatgatgaagtcaccatcgctggggtttatggcatgggaggtgtgggcaagacaaacatggtcagaaatgttgctctacaagcacgaaaaattgggctctttgatcatgtgattgtggctgtcgtatcccaagaccccaactttagaaggattcaacagcaattggcagagcagctcgacttgagattggaggggacggaatctggaacagctgatagattgaaggagaggataatggaaggaaagaggatccttataatcttggacgacatttgggaaaccatagacttgtcacttataggaattcccaaccccgatgagcttaagcgatgcaactctaaagtcctaatcaccacaagaagattggatgtttgccgctccatgaagagccaagcaagttctcttctcagtatactatctaaagaagattcttggaaactttttgtggattgttcgagaatatcttttgatgaatctaccaatatctatcgagcgagggcgatagttagaaaatgtggtggtctgcccgttgcattgaaagcaattgcacgggcacttgaagataaagacatggctgaatggaatatagcagttcaacaattgagggcatctcaaattgccagtcttgatgatcaggaagactatgatatccctatcaaagacttgttcaagtatgctatcgggaacggatttcttcgagaagcagccacaatccaagaagccagagatagagcaaattcggtgatcaagtacctcaaagcttccagcttacttttggacagtccaaaggagggatgcgtaaagatgcatgatgttgttcgggatacagccaagtcaattccaaggtatgaggatgatcatggattttgcgttaaagctggttgtggattaaaggagtttcgagggaccactgggcatggagactgctctgccatctcactaatgatgaatgatattgatcggcttcctgaagagttggtatgtccaaaactccagattttgttactacaaaacaatgttcatatagatgagatcccagaatctctttttcgaagttcgaaggcactaagggtcttagatattagcttctctagaatttcatcactaccgaggtcatttagtttcctaaccaacctccgagctttgtttttagaccattgcaatgagttggttgacatatcaatattcggaaacttgaagagacttgagattcttagtatgatagaatttcctctcaaggagttaccaaaagagatgggaaatttgaccaatctaaggatgctggacttaagtgggagttacaatattggtatatttccatatagtgtgctgtcaagattgtgtaaattagaagaactgtacatgcaatgtaattctgggaactggggaagcaaaattcatggaggagaagaaactaatgttggtcctgatgagttgattggcttgccacttttaaacaccgtgaagcttcgcatatctgatgcagaatgcttgcctaaaaatcttttctgggattggcatttggttacctttgatatatgtatcagcagagaaccaccatctagagactactcttcagaaccaattttctcacacgatcattcaaggacgctgactcttaacacaacaatcaacagcttaccagattggtttatcaacacagtgacagagaaagcagtgaaactacagtacctaaagtgcaggggattaaagaacattcttgtggaacataacagaggcagattacatggactgaagaatcttgctgtaattggtccacatgagaacttggtagtgttgatggaaacaataacactggtgccaaataaacctgtgtttgagaagttggaagagttgcatctccttggtgtgagttgcctgaaggaattatgtgttggtgaattacccgttgggtctctatgcaatctcaagttattcaaggtagaatattgccatgacttggtgaagacactcttaccatcaaatttgtggcagagactacacaatatggaaaaactaatttgtgaagatatgaatcaaatggagtatgtatttggatccaaagggatggagtcagaagatattatcttgataaaattgagagagatgatattgtggaatctagagaatctaataggcatatgcaatggtcctgctctaaatgcagtcttccatagtcttaaaagtttggcagtatatgggactgcccccattttacaatctctatttctgacttccacagcgggaatcgattcatccaagtcaatgatctacgacatttga

Protein Analysis

1035

Amino Acids

117.12

Weight (kDa)

6.45

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1082
AccB1I GGYRCC 1 cut(s) 2644
AccB7I CCANNNNNTGG 2 cut(s) 180, 2785
AccBSI CCGCTC 1 cut(s) 1203
AccI GTMKAC 1 cut(s) 1237
AciI CCGC 3 cut(s) 247, 1201, 3068
AclWI GGATC 9 cut(s) 92, 191, 497, 510, 1069, 1082, 1852, 2877, 2890
AcoI YGGCCR 1 cut(s) 621
AcsI RAATTY 8 cut(s) 477, 1128, 1561, 1920, 2051, 2086, 2220, 2809
AcuI CTGAAG 4 cut(s) 1815, 2385, 2600, 2726
AfaI GTAC 5 cut(s) 150, 516, 1577, 2186, 2516
AfiI CCNNNNNNNGG 5 cut(s) 180, 846, 1616, 2100, 2785
AflII CTTAAG 3 cut(s) 610, 1148, 2113
AjnI CCWGG 1 cut(s) 203
AjuI GAANNNNNNNTTGG 8 cut(s) 397, 429, 2229, 2261, 2703, 2718, 2735, 2750
AloI GAACNNNNNNTCC 2 cut(s) 641, 673
Alw26I GTCTC 7 cut(s) 359, 465, 1740, 2020, 2385, 2745, 2815
AlwI GGATC 9 cut(s) 92, 191, 497, 510, 1069, 1082, 1852, 2877, 2890
AlwNI CAGNNNCTG 1 cut(s) 204
Ama87I CYCGRG 1 cut(s) 762
AoxI GGCC 3 cut(s) 621, 728, 795
ApeKI GCWGC 4 cut(s) 325, 605, 997, 1529
ApoI RAATTY 8 cut(s) 477, 1128, 1561, 1920, 2051, 2086, 2220, 2809
ArsI GACNNNNNNTTYG 2 cut(s) 1432, 1464
Asp700I GAANNNNTTC 1 cut(s) 3076
AspLEI GCGC 2 cut(s) 581, 820
AspS9I GGNCC 6 cut(s) 657, 729, 1731, 2249, 2600, 2975
AsuHPI GGTGA 7 cut(s) 178, 248, 829, 1168, 1579, 2735, 2800
AsuII TTCGAA 2 cut(s) 1876, 1883
AvaI CYCGRG 1 cut(s) 762
AvaII GGWCC 5 cut(s) 657, 1731, 2249, 2600, 2975
AxyI CCTNAGG 2 cut(s) 135, 359
BaeGI GKGCMC 1 cut(s) 1381
BaeI ACNNNNGTAYC 2 cut(s) 2498, 2531
BalI TGGCCA 1 cut(s) 623
BamHI GGATCC 3 cut(s) 502, 1074, 2882
BanI GGYRCC 1 cut(s) 2644
BanII GRGCYC 1 cut(s) 924
BbsI GAAGAC 4 cut(s) 246, 1470, 2798, 2986
BbvCI CCTCAGC 1 cut(s) 102
BbvI GCAGC 4 cut(s) 312, 592, 1009, 1541
BccI CCATC 8 cut(s) 758, 848, 1766, 2074, 2392, 2620, 2812, 2887
BceAI ACGGC 1 cut(s) 743
BciT130I CCWGG 1 cut(s) 205
BciVI GTATCC 2 cut(s) 961, 1642
BclI TGATCA 4 cut(s) 928, 1456, 1569, 1681
BcoDI GTCTC 7 cut(s) 359, 465, 1740, 2020, 2385, 2745, 2815
BfaI CTAG 5 cut(s) 146, 570, 1917, 2388, 2948
BfmI CTRYAG 1 cut(s) 2510
BfoI RGCGCY 1 cut(s) 821
BfrI CTTAAG 3 cut(s) 610, 1148, 2113
BfuI GTATCC 2 cut(s) 961, 1642
BisI GCNGC 5 cut(s) 326, 606, 998, 1201, 1530
BlsI GCNGC 5 cut(s) 327, 607, 999, 1202, 1531
Bme1390I CCNGG 1 cut(s) 205
Bme18I GGWCC 5 cut(s) 657, 1731, 2249, 2600, 2975
BmeT110I CYCGRG 1 cut(s) 762
BmgT120I GGNCC 6 cut(s) 657, 729, 1731, 2249, 2600, 2975
BmiI GGNNCC 6 cut(s) 504, 658, 1076, 1732, 2646, 2884
BmrFI CCNGG 1 cut(s) 205
BmrI ACTGGG 2 cut(s) 1746, 2218
BmsI GCATC 8 cut(s) 80, 1145, 1442, 1610, 1620, 2094, 2296, 2692
BmuI ACTGGG 2 cut(s) 1746, 2218
BpiI GAAGAC 4 cut(s) 246, 1470, 2798, 2986
BplI GAGNNNNNCTC 2 cut(s) 1420, 1452
BpmI CTGGAG 1 cut(s) 1802
Bpu10I CCTNAGC 1 cut(s) 102
Bpu14I TTCGAA 2 cut(s) 1876, 1883
BpuEI CTTGAG 4 cut(s) 1027, 2045, 2051, 2738
Bsa29I ATCGAT 1 cut(s) 3075
BsaBI GATNNNNATC 2 cut(s) 1782, 2859
BsaI GGTCTC 1 cut(s) 2745
BsaJI CCNNGG 8 cut(s) 179, 250, 319, 422, 798, 1667, 1934, 2689
BsaWI WCCGGW 1 cut(s) 290
Bsc4I CCNNNNNNNGG 5 cut(s) 180, 846, 1616, 2100, 2785
Bse1I ACTGG 4 cut(s) 1446, 1741, 2213, 2646
Bse21I CCTNAGG 2 cut(s) 135, 359
Bse3DI GCAATG 6 cut(s) 61, 681, 1981, 1993, 2198, 2977
Bse8I GATNNNNATC 2 cut(s) 1782, 2859
BseBI CCWGG 1 cut(s) 205
BseCI ATCGAT 1 cut(s) 3075
BseDI CCNNGG 8 cut(s) 179, 250, 319, 422, 798, 1667, 1934, 2689
BseJI GATNNNNATC 2 cut(s) 1782, 2859
BseLI CCNNNNNNNGG 5 cut(s) 180, 846, 1616, 2100, 2785
BseMI GCAATG 6 cut(s) 61, 681, 1981, 1993, 2198, 2977
BseMII CTCAG 3 cut(s) 116, 373, 1246
BseNI ACTGG 4 cut(s) 1446, 1741, 2213, 2646
BseRI GAGGAG 2 cut(s) 347, 2244
BseSI GKGCMC 1 cut(s) 1381
BseXI GCAGC 4 cut(s) 312, 592, 1009, 1541
BseYI CCCAGC 1 cut(s) 845
BsgI GTGCAG 1 cut(s) 2545
BshFI GGCC 3 cut(s) 623, 730, 797
BshNI GGYRCC 1 cut(s) 2644
BshVI ATCGAT 1 cut(s) 3075
BsiHKCI CYCGRG 1 cut(s) 762
BsiSI CCGG 1 cut(s) 291
BslFI GGGAC 3 cut(s) 1033, 1744, 3040
BslI CCNNNNNNNGG 5 cut(s) 180, 846, 1616, 2100, 2785
BsmAI GTCTC 7 cut(s) 359, 465, 1740, 2020, 2385, 2745, 2815
BsmFI GGGAC 3 cut(s) 1033, 1744, 3040
BsmI GAATGC 1 cut(s) 2318
BsnI GGCC 3 cut(s) 623, 730, 797
Bso31I GGTCTC 1 cut(s) 2745
BsoBI CYCGRG 1 cut(s) 762
Bsp119I TTCGAA 2 cut(s) 1876, 1883
Bsp1286I GDGCHC 2 cut(s) 924, 1381
Bsp1407I TGTACA 1 cut(s) 2184
Bsp19I CCATGG 4 cut(s) 179, 250, 422, 798
BspACI CCGC 3 cut(s) 247, 1201, 3068
BspANI GGCC 3 cut(s) 623, 730, 797
BspCNI CTCAG 3 cut(s) 115, 372, 1245
BspDI ATCGAT 1 cut(s) 3075
BspLI GGNNCC 6 cut(s) 504, 658, 1076, 1732, 2646, 2884
BspPI GGATC 9 cut(s) 92, 191, 497, 510, 1069, 1082, 1852, 2877, 2890
BspQI GCTCTTC 1 cut(s) 1205
BspT104I TTCGAA 2 cut(s) 1876, 1883
BspT107I GGYRCC 1 cut(s) 2644
BspTI CTTAAG 3 cut(s) 610, 1148, 2113
BspTNI GGTCTC 1 cut(s) 2745
BsrBI CCGCTC 1 cut(s) 1203
BsrDI GCAATG 6 cut(s) 61, 681, 1981, 1993, 2198, 2977
BsrGI TGTACA 1 cut(s) 2184
BsrI ACTGG 4 cut(s) 1446, 1741, 2213, 2646
BssECI CCNNGG 8 cut(s) 179, 250, 319, 422, 798, 1667, 1934, 2689
BssNAI GTATAC 1 cut(s) 1238
BssT1I CCWWGG 6 cut(s) 179, 250, 422, 798, 1667, 2689
Bst1107I GTATAC 1 cut(s) 1238
Bst2UI CCWGG 1 cut(s) 205
Bst4CI ACNGT 5 cut(s) 1607, 2184, 2287, 2488, 2514
Bst6I CTCTTC 6 cut(s) 1205, 1233, 1791, 2018, 2404, 2670
BstAFI CTTAAG 3 cut(s) 610, 1148, 2113
BstAUI TGTACA 1 cut(s) 2184
BstBI TTCGAA 2 cut(s) 1876, 1883
BstC8I GCNNGC 4 cut(s) 330, 384, 2270, 2318
BstDEI CTNAG 8 cut(s) 102, 135, 359, 1232, 1892, 1900, 2039, 2099
BstDSI CCRYGG 4 cut(s) 179, 250, 422, 798
BstEII GGTNACC 1 cut(s) 2350
BstH2I RGCGCY 1 cut(s) 821
BstHHI GCGC 2 cut(s) 581, 820
BstMAI GTCTC 7 cut(s) 359, 465, 1740, 2020, 2385, 2745, 2815
BstMWI GCNNNNNNNGC 4 cut(s) 175, 905, 1364, 2987
BstNI CCWGG 1 cut(s) 205
BstNSI RCATGY 1 cut(s) 2191
BstPI GGTNACC 1 cut(s) 2350
BstSCI CCNGG 1 cut(s) 203
BstSFI CTRYAG 1 cut(s) 2510
BstSLI GKGCMC 1 cut(s) 1381
BstV1I GCAGC 4 cut(s) 312, 592, 1009, 1541
BstV2I GAAGAC 4 cut(s) 246, 1470, 2798, 2986
BstX2I RGATCY 5 cut(s) 97, 502, 1074, 1857, 2882
BstXI CCANNNNNNTGG 1 cut(s) 2893
BstYI RGATCY 5 cut(s) 97, 502, 1074, 1857, 2882
BstZ17I GTATAC 1 cut(s) 1238
Bsu15I ATCGAT 1 cut(s) 3075
Bsu36I CCTNAGG 2 cut(s) 135, 359
BsuI GTATCC 2 cut(s) 961, 1642
BsuRI GGCC 3 cut(s) 623, 730, 797
BsuTUI ATCGAT 1 cut(s) 3075
BtgI CCRYGG 4 cut(s) 179, 250, 422, 798
BtgZI GCGATG 2 cut(s) 826, 1168
BtsI GCAGTG 1 cut(s) 2508
BtsIMutI CAGTG 5 cut(s) 602, 1734, 2493, 2508, 2639
Cac8I GCNNGC 4 cut(s) 330, 384, 2270, 2318
CaiI CAGNNNCTG 1 cut(s) 204
CfoI GCGC 2 cut(s) 581, 820
Cfr13I GGNCC 6 cut(s) 657, 729, 1731, 2249, 2600, 2975
ClaI ATCGAT 1 cut(s) 3075
CseI GACGC 1 cut(s) 2443
Csp6I GTAC 5 cut(s) 149, 515, 1576, 2185, 2515
CviQI GTAC 5 cut(s) 149, 515, 1576, 2185, 2515
DdeI CTNAG 8 cut(s) 102, 135, 359, 1232, 1892, 1900, 2039, 2099
DraI TTTAAA 1 cut(s) 2280
EaeI YGGCCR 1 cut(s) 621
Eam1104I CTCTTC 6 cut(s) 1205, 1233, 1791, 2018, 2404, 2670
EarI CTCTTC 6 cut(s) 1205, 1233, 1791, 2018, 2404, 2670
Eco130I CCWWGG 6 cut(s) 179, 250, 422, 798, 1667, 2689
Eco24I GRGCYC 1 cut(s) 924
Eco31I GGTCTC 1 cut(s) 2745
Eco32I GATATC 1 cut(s) 1474
Eco47I GGWCC 5 cut(s) 657, 1731, 2249, 2600, 2975
Eco57I CTGAAG 4 cut(s) 1815, 2385, 2600, 2726
Eco81I CCTNAGG 2 cut(s) 135, 359
Eco88I CYCGRG 1 cut(s) 762
Eco91I GGTNACC 1 cut(s) 2350
EcoO65I GGTNACC 1 cut(s) 2350
EcoRI GAATTC 2 cut(s) 477, 1128
EcoRII CCWGG 1 cut(s) 203
EcoRV GATATC 1 cut(s) 1474
EcoT14I CCWWGG 6 cut(s) 179, 250, 422, 798, 1667, 2689
EcoT22I ATGCAT 1 cut(s) 1635
EcoT38I GRGCYC 1 cut(s) 924
ErhI CCWWGG 6 cut(s) 179, 250, 422, 798, 1667, 2689
FalI AAGNNNNNCTT 2 cut(s) 2783, 2815
FaqI GGGAC 3 cut(s) 1033, 1744, 3040
FauI CCCGC 2 cut(s) 254, 3061
FauNDI CATATG 1 cut(s) 2966
FbaI TGATCA 4 cut(s) 928, 1456, 1569, 1681
FblI GTMKAC 1 cut(s) 1237
Fnu4HI GCNGC 5 cut(s) 326, 606, 998, 1201, 1530
FriOI GRGCYC 1 cut(s) 924
Fsp4HI GCNGC 5 cut(s) 326, 606, 998, 1201, 1530
FspBI CTAG 5 cut(s) 146, 570, 1917, 2388, 2948
GlaI GCGC 2 cut(s) 580, 819
GluI GCNGC 5 cut(s) 326, 606, 998, 1201, 1530
GsaI CCCAGC 1 cut(s) 849
GsuI CTGGAG 1 cut(s) 1802
HaeII RGCGCY 1 cut(s) 821
HaeIII GGCC 3 cut(s) 623, 730, 797
HapII CCGG 1 cut(s) 291
HgaI GACGC 1 cut(s) 2443
HhaI GCGC 2 cut(s) 581, 820
Hin6I GCGC 2 cut(s) 579, 818
HinP1I GCGC 2 cut(s) 579, 818
HincII GTYRAC 1 cut(s) 1999
HindII GTYRAC 1 cut(s) 1999
HindIII AAGCTT 2 cut(s) 1584, 2291
HpaII CCGG 1 cut(s) 291
HphI GGTGA 7 cut(s) 178, 248, 829, 1168, 1579, 2735, 2800
Hpy166II GTNNAC 4 cut(s) 759, 1238, 1999, 2603
Hpy188I TCNGA 9 cut(s) 121, 661, 890, 1964, 2015, 2305, 2404, 2902, 3057
Hpy8I GTNNAC 4 cut(s) 759, 1238, 1999, 2603
Hpy99I CGWCG 1 cut(s) 737
HpyAV CCTTC 7 cut(s) 57, 458, 966, 1042, 1058, 1879, 2701
HpyCH4III ACNGT 5 cut(s) 1607, 2184, 2287, 2488, 2514
HpyF10VI GCNNNNNNNGC 4 cut(s) 175, 905, 1364, 2987
HpyF3I CTNAG 8 cut(s) 102, 135, 359, 1232, 1892, 1900, 2039, 2099
HspAI GCGC 2 cut(s) 579, 818
Ksp22I TGATCA 4 cut(s) 928, 1456, 1569, 1681
LguI GCTCTTC 1 cut(s) 1205
LmnI GCTCC 1 cut(s) 1208
Lsp1109I GCAGC 4 cut(s) 312, 592, 1009, 1541
LweI GCATC 8 cut(s) 80, 1145, 1442, 1610, 1620, 2094, 2296, 2692
MaeI CTAG 5 cut(s) 146, 570, 1917, 2388, 2948
MaeIII GTNAC 7 cut(s) 835, 1116, 1827, 2067, 2123, 2350, 2488
MbiI CCGCTC 1 cut(s) 1203
MfeI CAATTG 4 cut(s) 387, 986, 1368, 1424
MflI RGATCY 5 cut(s) 97, 502, 1074, 1857, 2882
MhlI GDGCHC 2 cut(s) 924, 1381
MlsI TGGCCA 1 cut(s) 623
MluNI TGGCCA 1 cut(s) 623
MlyI GAGTC 2 cut(s) 2434, 2906
MmeI TCCRAC 1 cut(s) 2652
Mox20I TGGCCA 1 cut(s) 623
Mph1103I ATGCAT 1 cut(s) 1635
MroXI GAANNNNTTC 1 cut(s) 3076
MscI TGGCCA 1 cut(s) 623
MslI CAYNNNNRTG 3 cut(s) 1851, 1986, 2546
Msp20I TGGCCA 1 cut(s) 623
MspA1I CMGCKG 3 cut(s) 509, 1037, 3068
MspCI CTTAAG 3 cut(s) 610, 1148, 2113
MspI CCGG 1 cut(s) 291
MspR9I CCNGG 1 cut(s) 205
MunI CAATTG 4 cut(s) 387, 986, 1368, 1424
Mva1269I GAATGC 1 cut(s) 2318
MvaI CCWGG 1 cut(s) 205
MwoI GCNNNNNNNGC 4 cut(s) 175, 905, 1364, 2987
NcoI CCATGG 4 cut(s) 179, 250, 422, 798
NdeI CATATG 1 cut(s) 2966
NlaIV GGNNCC 6 cut(s) 504, 658, 1076, 1732, 2646, 2884
NmuCI GTSAC 3 cut(s) 835, 1116, 2488
NsiI ATGCAT 1 cut(s) 1635
NspI RCATGY 1 cut(s) 2191
NspV TTCGAA 2 cut(s) 1876, 1883
PciSI GCTCTTC 1 cut(s) 1205
PctI GAATGC 1 cut(s) 2318
PdmI GAANNNNTTC 1 cut(s) 3076
PflFI GACNNNGTC 1 cut(s) 7
PflMI CCANNNNNTGG 2 cut(s) 180, 2785
PfoI TCCNGGA 1 cut(s) 203
PkrI GCNGC 5 cut(s) 327, 607, 999, 1202, 1531
PleI GAGTC 2 cut(s) 2434, 2905
PpsI GAGTC 2 cut(s) 2434, 2905
PsiI TTATAA 1 cut(s) 1082
Psp6I CCWGG 1 cut(s) 203
PspEI GGTNACC 1 cut(s) 2350
PspFI CCCAGC 1 cut(s) 845
PspGI CCWGG 1 cut(s) 203
PspN4I GGNNCC 6 cut(s) 504, 658, 1076, 1732, 2646, 2884
PspPI GGNCC 6 cut(s) 657, 729, 1731, 2249, 2600, 2975
PstNI CAGNNNCTG 1 cut(s) 204
PsuI RGATCY 5 cut(s) 97, 502, 1074, 1857, 2882
PsyI GACNNNGTC 1 cut(s) 7
PvuII CAGCTG 2 cut(s) 509, 1037
RsaI GTAC 5 cut(s) 150, 516, 1577, 2186, 2516
RsaNI GTAC 5 cut(s) 149, 515, 1576, 2185, 2515
RseI CAYNNNNRTG 3 cut(s) 1851, 1986, 2546
SapI GCTCTTC 1 cut(s) 1205
SatI GCNGC 5 cut(s) 326, 606, 998, 1201, 1530
Sau96I GGNCC 6 cut(s) 657, 729, 1731, 2249, 2600, 2975
SchI GAGTC 2 cut(s) 2434, 2906
ScrFI CCNGG 1 cut(s) 205
SduI GDGCHC 2 cut(s) 924, 1381
SfaNI GCATC 8 cut(s) 80, 1145, 1442, 1610, 1620, 2094, 2296, 2692
SfcI CTRYAG 1 cut(s) 2510
SfuI TTCGAA 2 cut(s) 1876, 1883
SinI GGWCC 5 cut(s) 657, 1731, 2249, 2600, 2975
SmiMI CAYNNNNRTG 3 cut(s) 1851, 1986, 2546
SmlI CTYRAG 7 cut(s) 610, 1006, 1148, 2030, 2060, 2113, 2753
SmoI CTYRAG 7 cut(s) 610, 1006, 1148, 2030, 2060, 2113, 2753
SsiI CCGC 3 cut(s) 247, 1201, 3068
SspI AATATT 4 cut(s) 777, 2010, 2131, 2774
SspMI CTAG 5 cut(s) 146, 570, 1917, 2388, 2948
StyD4I CCNGG 1 cut(s) 203
StyI CCWWGG 6 cut(s) 179, 250, 422, 798, 1667, 2689
TaaI ACNGT 5 cut(s) 1607, 2184, 2287, 2488, 2514
TaqII GACCGA 1 cut(s) 333
TatI WGTACW 1 cut(s) 2184
TauI GCSGC 1 cut(s) 1203
TscAI CASTG 5 cut(s) 602, 1741, 2493, 2508, 2646
TseFI GTSAC 3 cut(s) 835, 1116, 2488
TseI GCWGC 4 cut(s) 325, 605, 997, 1529
Tsp45I GTSAC 3 cut(s) 835, 1116, 2488
TspGWI ACGGA 2 cut(s) 1037, 1527
TspRI CASTG 5 cut(s) 602, 1741, 2493, 2508, 2646
Tth111I GACNNNGTC 1 cut(s) 7
Van91I CCANNNNNTGG 2 cut(s) 180, 2785
Vha464I CTTAAG 3 cut(s) 610, 1148, 2113
VpaK11BI GGWCC 5 cut(s) 657, 1731, 2249, 2600, 2975
XapI RAATTY 8 cut(s) 477, 1128, 1561, 1920, 2051, 2086, 2220, 2809
XbaI TCTAGA 3 cut(s) 1916, 2387, 2947
XceI RCATGY 1 cut(s) 2191
XcmI CCANNNNNNNNNTGG 3 cut(s) 1186, 1597, 2811
XmiI GTMKAC 1 cut(s) 1237
XmnI GAANNNNTTC 1 cut(s) 3076
XspI CTAG 5 cut(s) 146, 570, 1917, 2388, 2948
Zsp2I ATGCAT 1 cut(s) 1635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.