Rw5G037790

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000085
Physical Location & Seq
Reverse (-)
66579134 .. 66583001
3868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G037790.1

Sequence Viewer

Length: 2370 bp
ATGGCCTTGGAATCCCCAACGGCCTCTGCATCACTTTCTACATCGGCTCCTTGGTGGAAGTATGAGGTGTTTTTGAGTTTCAGGAGTGAAGACACTCGGCGGGGTTTTACTTCTTATTTGTACAATGAATTGCAAAACAGAGAAATCAAGACATTCATGGATATCGACGGAACTAGTTTGGATGGAGGAGAGGGGATTTCTCAAAGTATCGTAGAGGCCATTCAAGAATCAAGATTTGCAATCGTTGTTCTCTCGCAAAATTATGCTTCTTCCAGTTGGTGTTTGGATGAACTCACACAGATTATGCAGTGCATGGAAAATAAGGAAACAATTCTGCCAGTTTTCTATCACGTGGATCCCTCTGAAGTGCGCTCTCAAAGGGGGGTGTGCGGAGCGGCCTTGGCTGCACATGAAGAGCGGTTCAAAGATCAAAAGGAGAGGCTGATGAAATGGAGGGACGCCTTGAACAAAATCAGCAGCATCTTTGGCTGGGTATGTGGGAGTTCTGAGCCAGAAGGACAGATTGTCCAACAAATCGCGGAATTTGTCTGCAGCAAACCTATTGAAATTAAGTCGACGGAAGATATTGAAACTCATGGAACTTCTCCTCGCTGGAAGTATGATGTGTTTATAAATTTCAGGGGTGAGGACGCTTGTAAGGGTTTTCTGTCCCATTTACTAGCTGAATTGCAAAAGAAACCAGCACACCTGAACACAGTAAAGAATGATGAACCACTTCCAAAGGGGCGGAATATATCTTCGTATCTCCTAAACGCCATAGAAGAGGTGAGGTTTGCCATTGTTGTTCTTTCGCAAGACTTTGCTTATTCATCATGGTGCCTAGAGGAACTAGCAAAGATTTTTGAATGCATGGAAAACCAAAATAGAATTCTGCCAATCTTTTATCATGTGGATCCCTCTGAGGTGCGACATCAAAGGGGGAGTTTTGGAGATGCCTTCGCTGTACATGAAGAAAGATTTCAGGATAATCATGAGAAGGTCAGGCGGTGGAGACGTGTTTTATCAATGGTAGCCAACATCCCTGGATGGACTTCAGAAAAATATGAGTATGAAAGAGAACTTATCAAAGACGTTGTGCAAGCTATGTGCAGTAGACTAGTTCAGTCTACAGAGTCGACAGAAGATTTTGAAGCAACAGGAGATGTCATGGACCAAACTTCTCCCCAGCCTGACCCAGCTCCTGTGTGGAAGAATGATGTGCTTTCGGGTTTCGGGATGGAAGACACTCGCAGGGGTTTTGTAGCCCATTCAGACCATGAATTGCCAAACACAGGACTAAGTAAAACATTCAAGGATGAAGACCAGCTTGAAAAAGGGGTAGCCCTCCCCTCTGCATCTCTTTCCTCAACTGAACCAAGTCCTCAACCAGCTCTTGGGCAGAAGAATGATGAGTTTTTGGGTTTCAGGGGAAACGACAATCATAGGGGTTTTGTCACCCATTCAAGTAATGAAATACAAAACACCAGGGTTACTAAGACATTCACCGATGAAGAACATCTTGAAAAAGGGATAGCTGCGTCTCCGCCTTCATCAGCTGAACGAGATCCTCGGCCGAAGTATGATGTGTTTTTGAGTTTCAGGGGGGAAGACACTCGTAGGGGTTTTATAGCCCATTTATACCGTGAATTGCAAAACACCAGAGTGATTAAAACTTTCAAGGATGACAGGCAACTAAAAAAAGGGACGGTCATTGCTTCAAATCTCCTAACGGCAATCGAAGAATCAAGATTTGCGATCATTGTGTTGTCAAAAAATTATGCTTCTTCTTCATGGTGTTTGGATGAACTTGCAAAGATTTTCCAATGCATGAAAGATAGGAACACAATTTTCCCAATTTTTTATGAGGTGGAACCCACTGATGTACGCCATCAAAAGACAGAGACGAGGTTTGGAAAGGCTTTCATTAAGCAGCACGAAACTCATGGACAAGACAACGAGAAGATGAAGCAATGGAGTGCTGCTTTAGAAGGAGTGGCTGGAATCGCTGGGTTCCCGTCAACTAAGTATCAGACGGACGTAGAACTAATCGAAGACGTTGTGAAACATTTGTTGAGCAAAGTACTTCAAGCACCCACCGGAAATTTTGAAACATTTAAAGCGACAAGGCGAGCAATGGATGACGTCATGGAGGTATTAAAAGATGATCAAGTCACTGTCCTTGGGGTGCATGGAGTGGGTGGCGTTGGAAAGACGACGATGGTCAAACATGTTAGTGCACAAGCCCAGAAAGATGGGATTTTTGATCATGTGATTATGGTTGTCGTATCCAAAAGCCCTGACTTGCAAGAAATTCAAAGCACATTGGCACTCATGCTTCTTGCTATGCTGCCTATTCCCCGAAAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

789

Amino Acids

89.37

Weight (kDa)

5.57

Isoelectric Point (pI)

49.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 20 - 189 4.7e-47 TIR domain
TIR_2 PF13676 23 - 120 4.6e-16 TIR domain
TIR PF01582 206 - 384 4.9e-47 TIR domain
TIR_2 PF13676 209 - 306 2.3e-09 TIR domain
TIR PF01582 526 - 700 3.1e-48 TIR domain
TIR_2 PF13676 529 - 625 1.1e-14 TIR domain
NB-ARC PF00931 711 - 779 3.5e-11 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 632
AatII GACGTC 1 cut(s) 2145
AccB1I GGYRCC 1 cut(s) 837
AccB7I CCANNNNNTGG 1 cut(s) 1394
AccBSI CCGCTC 2 cut(s) 395, 418
AccI GTMKAC 4 cut(s) 575, 1114, 1127, 1136
AccII CGCG 1 cut(s) 539
AciI CCGC 8 cut(s) 100, 390, 395, 418, 539, 748, 1006, 1544
AclWI GGATC 5 cut(s) 350, 363, 908, 921, 1559
AcoI YGGCCR 1 cut(s) 1571
AcsI RAATTY 5 cut(s) 542, 634, 888, 2101, 2310
AcuI CTGAAG 2 cut(s) 384, 1038
AcvI CACGTG 1 cut(s) 352
AcyI GRCGYC 2 cut(s) 459, 2142
AfaI GTAC 4 cut(s) 122, 966, 1884, 2082
AfiI CCNNNNNNNGG 2 cut(s) 1292, 1394
AflIII ACRYGT 2 cut(s) 1015, 2227
AhdI GACNNNNNGTC 1 cut(s) 524
AhlI ACTAGT 2 cut(s) 173, 1117
AjiI CACGTC 1 cut(s) 1016
AjnI CCWGG 2 cut(s) 1042, 1484
AjuI GAANNNNNNNTTGG 2 cut(s) 873, 905
AleI CACNNNNGTG 1 cut(s) 1661
AluBI AGCT 7 cut(s) 683, 1103, 1199, 1327, 1391, 1535, 1556
AluI AGCT 7 cut(s) 683, 1103, 1199, 1327, 1391, 1535, 1556
Alw21I GWGCWC 1 cut(s) 2239
Alw26I GTCTC 3 cut(s) 1006, 1545, 1895
Alw44I GTGCAC 1 cut(s) 2235
AlwI GGATC 5 cut(s) 350, 363, 908, 921, 1559
AlwNI CAGNNNCTG 1 cut(s) 1202
AoxI GGCC 5 cut(s) 3, 21, 216, 396, 1571
ApaLI GTGCAC 1 cut(s) 2235
ApeKI GCWGC 7 cut(s) 404, 477, 552, 1535, 1930, 1979, 2347
ApoI RAATTY 5 cut(s) 542, 634, 888, 2101, 2310
Asp700I GAANNNNTTC 3 cut(s) 330, 735, 978
AspLEI GCGC 1 cut(s) 372
AspS9I GGNCC 1 cut(s) 1171
AsuHPI GGTGA 4 cut(s) 656, 799, 1447, 1495
AvaII GGWCC 1 cut(s) 1171
BaeGI GKGCMC 1 cut(s) 2239
BamHI GGATCC 2 cut(s) 355, 913
BanI GGYRCC 1 cut(s) 837
BbrPI CACGTG 1 cut(s) 352
BbsI GAAGAC 5 cut(s) 96, 1248, 1326, 1614, 2058
Bbv12I GWGCWC 1 cut(s) 2239
BbvI GCAGC 7 cut(s) 391, 489, 564, 1522, 1942, 1966, 2334
BccI CCATC 6 cut(s) 176, 1041, 1231, 1896, 2212, 2246
BceAI ACGGC 2 cut(s) 36, 1746
BciT130I CCWGG 2 cut(s) 1044, 1486
BciVI GTATCC 1 cut(s) 2296
BclI TGATCA 2 cut(s) 2164, 2263
BcoDI GTCTC 3 cut(s) 1006, 1545, 1895
BcuI ACTAGT 2 cut(s) 173, 1117
BfaI CTAG 5 cut(s) 174, 680, 842, 851, 1118
BfmI CTRYAG 2 cut(s) 550, 1128
BfuI GTATCC 1 cut(s) 2296
BisI GCNGC 8 cut(s) 396, 405, 478, 553, 1536, 1931, 1980, 2348
BlsI GCNGC 8 cut(s) 397, 406, 479, 554, 1537, 1932, 1981, 2349
BmcAI AGTACT 1 cut(s) 2082
Bme1390I CCNGG 2 cut(s) 1044, 1486
Bme18I GGWCC 1 cut(s) 1171
BmeRI GACNNNNNGTC 1 cut(s) 524
BmgBI CACGTC 1 cut(s) 1016
BmgT120I GGNCC 1 cut(s) 1171
BmiI GGNNCC 6 cut(s) 48, 357, 839, 915, 1872, 2012
BmrFI CCNGG 2 cut(s) 1044, 1486
BmsI GCATC 4 cut(s) 38, 489, 943, 1364
BoxI GACNNNNGTC 1 cut(s) 2219
BpiI GAAGAC 5 cut(s) 96, 1248, 1326, 1614, 2058
BsaAI YACGTR 1 cut(s) 352
BsaHI GRCGYC 2 cut(s) 459, 2142
BsaJI CCNNGG 7 cut(s) 6, 50, 399, 1042, 1485, 1568, 2179
BsaWI WCCGGW 1 cut(s) 2096
BsaXI ACNNNNNCTCC 2 cut(s) 31, 61
Bsc4I CCNNNNNNNGG 2 cut(s) 1292, 1394
Bse1I ACTGG 2 cut(s) 273, 338
Bse3DI GCAATG 3 cut(s) 1710, 1976, 2139
BseBI CCWGG 2 cut(s) 1044, 1486
BseDI CCNNGG 7 cut(s) 6, 50, 399, 1042, 1485, 1568, 2179
BseGI GGATG 9 cut(s) 187, 292, 1038, 1052, 1242, 1321, 1687, 1807, 2143
BseLI CCNNNNNNNGG 2 cut(s) 1292, 1394
BseMI GCAATG 3 cut(s) 1710, 1976, 2139
BseMII CTCAG 2 cut(s) 498, 912
BseNI ACTGG 2 cut(s) 273, 338
BseRI GAGGAG 2 cut(s) 201, 597
BseSI GKGCMC 1 cut(s) 2239
BseX3I CGGCCG 1 cut(s) 1571
BseXI GCAGC 7 cut(s) 391, 489, 564, 1522, 1942, 1966, 2334
BseYI CCCAGC 4 cut(s) 489, 1185, 1195, 2006
BsgI GTGCAG 2 cut(s) 390, 1129
Bsh1236I CGCG 1 cut(s) 539
Bsh1285I CGRYCG 1 cut(s) 1574
BshFI GGCC 5 cut(s) 5, 23, 218, 398, 1573
BshNI GGYRCC 1 cut(s) 837
BsiEI CGRYCG 1 cut(s) 1574
BsiHKAI GWGCWC 1 cut(s) 2239
BsiSI CCGG 1 cut(s) 2097
BslFI GGGAC 3 cut(s) 470, 655, 1717
BslI CCNNNNNNNGG 2 cut(s) 1292, 1394
BsmAI GTCTC 3 cut(s) 1006, 1545, 1895
BsmBI CGTCTC 3 cut(s) 1006, 1545, 1895
BsmFI GGGAC 3 cut(s) 470, 655, 1717
BsmI GAATGC 1 cut(s) 872
BsnI GGCC 5 cut(s) 5, 23, 218, 398, 1573
Bsp1286I GDGCHC 1 cut(s) 2239
Bsp1407I TGTACA 2 cut(s) 120, 964
Bsp143I GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
BspACI CCGC 8 cut(s) 100, 390, 395, 418, 539, 748, 1006, 1544
BspANI GGCC 5 cut(s) 5, 23, 218, 398, 1573
BspCNI CTCAG 2 cut(s) 499, 913
BspFNI CGCG 1 cut(s) 539
BspHI TCATGA 1 cut(s) 991
BspLI GGNNCC 6 cut(s) 48, 357, 839, 915, 1872, 2012
BspMAI CTGCAG 1 cut(s) 554
BspPI GGATC 5 cut(s) 350, 363, 908, 921, 1559
BspQI GCTCTTC 1 cut(s) 408
BspT107I GGYRCC 1 cut(s) 837
BsrBI CCGCTC 2 cut(s) 395, 418
BsrDI GCAATG 3 cut(s) 1710, 1976, 2139
BsrGI TGTACA 2 cut(s) 120, 964
BsrI ACTGG 2 cut(s) 273, 338
BssECI CCNNGG 7 cut(s) 6, 50, 399, 1042, 1485, 1568, 2179
BssMI GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
BssNI GRCGYC 2 cut(s) 459, 2142
BssT1I CCWWGG 4 cut(s) 6, 50, 399, 2179
Bst2UI CCWGG 2 cut(s) 1044, 1486
Bst4CI ACNGT 4 cut(s) 718, 1643, 1708, 2176
Bst6I CTCTTC 2 cut(s) 408, 777
BstACI GRCGYC 2 cut(s) 459, 2142
BstAUI TGTACA 2 cut(s) 120, 964
BstBAI YACGTR 1 cut(s) 352
BstC8I GCNNGC 2 cut(s) 1101, 2130
BstDEI CTNAG 5 cut(s) 507, 921, 1298, 1494, 2022
BstF5I GGATG 9 cut(s) 187, 292, 1038, 1052, 1242, 1321, 1687, 1807, 2143
BstFNI CGCG 1 cut(s) 539
BstHHI GCGC 1 cut(s) 372
BstKTI GATC 7 cut(s) 358, 430, 916, 1567, 1758, 2167, 2266
BstMAI GTCTC 3 cut(s) 1006, 1545, 1895
BstMBI GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
BstMCI CGRYCG 1 cut(s) 1574
BstMWI GCNNNNNNNGC 4 cut(s) 401, 404, 486, 2003
BstNI CCWGG 2 cut(s) 1044, 1486
BstNSI RCATGY 1 cut(s) 2231
BstPAI GACNNNNGTC 1 cut(s) 2219
BstSCI CCNGG 2 cut(s) 1042, 1484
BstSFI CTRYAG 2 cut(s) 550, 1128
BstSLI GKGCMC 1 cut(s) 2239
BstUI CGCG 1 cut(s) 539
BstV1I GCAGC 7 cut(s) 391, 489, 564, 1522, 1942, 1966, 2334
BstV2I GAAGAC 5 cut(s) 96, 1248, 1326, 1614, 2058
BstX2I RGATCY 3 cut(s) 355, 913, 1564
BstXI CCANNNNNNTGG 1 cut(s) 2252
BstYI RGATCY 3 cut(s) 355, 913, 1564
BstZI CGGCCG 1 cut(s) 1571
BsuI GTATCC 1 cut(s) 2296
BsuRI GGCC 5 cut(s) 5, 23, 218, 398, 1573
BtrI CACGTC 1 cut(s) 1016
BtsCI GGATG 9 cut(s) 187, 292, 1038, 1052, 1242, 1321, 1687, 1807, 2143
BtsI GCAGTG 1 cut(s) 314
BtsIMutI CAGTG 3 cut(s) 314, 1875, 2172
Cac8I GCNNGC 2 cut(s) 1101, 2130
CaiI CAGNNNCTG 1 cut(s) 1202
CciI TCATGA 1 cut(s) 991
CfoI GCGC 1 cut(s) 372
Cfr13I GGNCC 1 cut(s) 1171
CseI GACGC 3 cut(s) 467, 659, 1527
Csp6I GTAC 4 cut(s) 121, 965, 1883, 2081
CviQI GTAC 4 cut(s) 121, 965, 1883, 2081
DdeI CTNAG 5 cut(s) 507, 921, 1298, 1494, 2022
DpnI GATC 7 cut(s) 357, 429, 915, 1566, 1757, 2166, 2265
DpnII GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
DraI TTTAAA 1 cut(s) 2116
DriI GACNNNNNGTC 1 cut(s) 524
EaeI YGGCCR 1 cut(s) 1571
EagI CGGCCG 1 cut(s) 1571
Eam1104I CTCTTC 2 cut(s) 408, 777
Eam1105I GACNNNNNGTC 1 cut(s) 524
EarI CTCTTC 2 cut(s) 408, 777
EciI GGCGGA 2 cut(s) 763, 1533
EclXI CGGCCG 1 cut(s) 1571
Eco130I CCWWGG 4 cut(s) 6, 50, 399, 2179
Eco32I GATATC 1 cut(s) 163
Eco47I GGWCC 1 cut(s) 1171
Eco52I CGGCCG 1 cut(s) 1571
Eco57I CTGAAG 2 cut(s) 384, 1038
Eco72I CACGTG 1 cut(s) 352
EcoRI GAATTC 1 cut(s) 888
EcoRII CCWGG 2 cut(s) 1042, 1484
EcoRV GATATC 1 cut(s) 163
EcoT14I CCWWGG 4 cut(s) 6, 50, 399, 2179
EcoT22I ATGCAT 2 cut(s) 872, 1829
ErhI CCWWGG 4 cut(s) 6, 50, 399, 2179
Esp3I CGTCTC 3 cut(s) 1006, 1545, 1895
FalI AAGNNNNNCTT 4 cut(s) 1311, 1343, 1503, 1535
FaqI GGGAC 3 cut(s) 470, 655, 1717
FauI CCCGC 1 cut(s) 93
FbaI TGATCA 2 cut(s) 2164, 2263
FblI GTMKAC 4 cut(s) 575, 1114, 1127, 1136
Fnu4HI GCNGC 8 cut(s) 396, 405, 478, 553, 1536, 1931, 1980, 2348
FokI GGATG 9 cut(s) 194, 299, 1025, 1059, 1249, 1328, 1694, 1814, 2150
Fsp4HI GCNGC 8 cut(s) 396, 405, 478, 553, 1536, 1931, 1980, 2348
FspBI CTAG 5 cut(s) 174, 680, 842, 851, 1118
GlaI GCGC 1 cut(s) 371
GluI GCNGC 8 cut(s) 396, 405, 478, 553, 1536, 1931, 1980, 2348
GsaI CCCAGC 4 cut(s) 493, 1189, 1199, 2010
HaeIII GGCC 5 cut(s) 5, 23, 218, 398, 1573
HapII CCGG 1 cut(s) 2097
HgaI GACGC 3 cut(s) 467, 659, 1527
HhaI GCGC 1 cut(s) 372
Hin1I GRCGYC 2 cut(s) 459, 2142
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HincII GTYRAC 3 cut(s) 576, 1137, 2019
HindII GTYRAC 3 cut(s) 576, 1137, 2019
HinfI GANTC 5 cut(s) 11, 227, 1133, 1742, 2001
HpaII CCGG 1 cut(s) 2097
HphI GGTGA 4 cut(s) 656, 799, 1447, 1495
Hpy166II GTNNAC 6 cut(s) 576, 1115, 1128, 1137, 2019, 2237
Hpy188I TCNGA 6 cut(s) 364, 508, 922, 1057, 1273, 2031
Hpy188III TCNNGA 9 cut(s) 82, 148, 224, 231, 983, 992, 1234, 1520, 1746
Hpy8I GTNNAC 6 cut(s) 576, 1115, 1128, 1137, 2019, 2237
Hpy99I CGWCG 3 cut(s) 170, 580, 2218
HpyAV CCTTC 5 cut(s) 509, 967, 991, 1557, 1982
HpyCH4III ACNGT 4 cut(s) 718, 1643, 1708, 2176
HpyCH4IV ACGT 6 cut(s) 351, 1015, 1092, 2037, 2055, 2142
HpyF10VI GCNNNNNNNGC 4 cut(s) 401, 404, 486, 2003
HpyF3I CTNAG 5 cut(s) 507, 921, 1298, 1494, 2022
HpySE526I ACGT 6 cut(s) 351, 1015, 1092, 2037, 2055, 2142
Hsp92I GRCGYC 2 cut(s) 459, 2142
HspAI GCGC 1 cut(s) 370
Ksp22I TGATCA 2 cut(s) 2164, 2263
Kzo9I GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
LguI GCTCTTC 1 cut(s) 408
LmnI GCTCC 3 cut(s) 52, 392, 1204
Lsp1109I GCAGC 7 cut(s) 391, 489, 564, 1522, 1942, 1966, 2334
LweI GCATC 4 cut(s) 38, 489, 943, 1364
MaeI CTAG 5 cut(s) 174, 680, 842, 851, 1118
MaeII ACGT 6 cut(s) 351, 1015, 1092, 2037, 2055, 2142
MaeIII GTNAC 3 cut(s) 1453, 1489, 2170
MalI GATC 7 cut(s) 357, 429, 915, 1566, 1757, 2166, 2265
MbiI CCGCTC 2 cut(s) 395, 418
MboI GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
MflI RGATCY 3 cut(s) 355, 913, 1564
MhlI GDGCHC 1 cut(s) 2239
MlyI GAGTC 1 cut(s) 1142
MmeI TCCRAC 2 cut(s) 553, 2185
Mph1103I ATGCAT 2 cut(s) 872, 1829
MroXI GAANNNNTTC 3 cut(s) 330, 735, 978
MseI TTAA 5 cut(s) 570, 1668, 1926, 2115, 2156
MslI CAYNNNNRTG 3 cut(s) 835, 1661, 2232
MspA1I CMGCKG 1 cut(s) 1556
MspI CCGG 1 cut(s) 2097
MspR9I CCNGG 2 cut(s) 1044, 1486
Mva1269I GAATGC 1 cut(s) 872
MvaI CCWGG 2 cut(s) 1044, 1486
MvnI CGCG 1 cut(s) 539
MwoI GCNNNNNNNGC 4 cut(s) 401, 404, 486, 2003
NdeII GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
NlaIV GGNNCC 6 cut(s) 48, 357, 839, 915, 1872, 2012
NmeAIII GCCGAG 2 cut(s) 76, 1549
NmuCI GTSAC 2 cut(s) 1453, 2170
NsiI ATGCAT 2 cut(s) 872, 1829
NspI RCATGY 1 cut(s) 2231
OliI CACNNNNGTG 1 cut(s) 1661
PagI TCATGA 1 cut(s) 991
PciI ACATGT 1 cut(s) 2227
PciSI GCTCTTC 1 cut(s) 408
PctI GAATGC 1 cut(s) 872
PdmI GAANNNNTTC 3 cut(s) 330, 735, 978
PfeI GAWTC 4 cut(s) 11, 227, 1742, 2001
PflMI CCANNNNNTGG 1 cut(s) 1394
PkrI GCNGC 8 cut(s) 397, 406, 479, 554, 1537, 1932, 1981, 2349
PleI GAGTC 1 cut(s) 1141
PmaCI CACGTG 1 cut(s) 352
PmlI CACGTG 1 cut(s) 352
PpsI GAGTC 1 cut(s) 1141
Ppu21I YACGTR 1 cut(s) 352
PscI ACATGT 1 cut(s) 2227
PshAI GACNNNNGTC 1 cut(s) 2219
PsiI TTATAA 1 cut(s) 632
Psp6I CCWGG 2 cut(s) 1042, 1484
PspCI CACGTG 1 cut(s) 352
PspFI CCCAGC 4 cut(s) 489, 1185, 1195, 2006
PspGI CCWGG 2 cut(s) 1042, 1484
PspN4I GGNNCC 6 cut(s) 48, 357, 839, 915, 1872, 2012
PspPI GGNCC 1 cut(s) 1171
PstI CTGCAG 1 cut(s) 554
PstNI CAGNNNCTG 1 cut(s) 1202
PsuI RGATCY 3 cut(s) 355, 913, 1564
PvuII CAGCTG 1 cut(s) 1556
RsaI GTAC 4 cut(s) 122, 966, 1884, 2082
RsaNI GTAC 4 cut(s) 121, 965, 1883, 2081
RseI CAYNNNNRTG 3 cut(s) 835, 1661, 2232
SalI GTCGAC 2 cut(s) 574, 1135
SapI GCTCTTC 1 cut(s) 408
SaqAI TTAA 5 cut(s) 570, 1668, 1926, 2115, 2156
SatI GCNGC 8 cut(s) 396, 405, 478, 553, 1536, 1931, 1980, 2348
Sau3AI GATC 7 cut(s) 355, 427, 913, 1564, 1755, 2164, 2263
Sau96I GGNCC 1 cut(s) 1171
ScaI AGTACT 1 cut(s) 2082
SchI GAGTC 1 cut(s) 1142
ScrFI CCNGG 2 cut(s) 1044, 1486
SduI GDGCHC 1 cut(s) 2239
SfaNI GCATC 4 cut(s) 38, 489, 943, 1364
SfcI CTRYAG 2 cut(s) 550, 1128
SinI GGWCC 1 cut(s) 1171
SmiMI CAYNNNNRTG 3 cut(s) 835, 1661, 2232
SpeI ACTAGT 2 cut(s) 173, 1117
SsiI CCGC 8 cut(s) 100, 390, 395, 418, 539, 748, 1006, 1544
SspMI CTAG 5 cut(s) 174, 680, 842, 851, 1118
StyD4I CCNGG 2 cut(s) 1042, 1484
StyI CCWWGG 4 cut(s) 6, 50, 399, 2179
TaaI ACNGT 4 cut(s) 718, 1643, 1708, 2176
TaiI ACGT 6 cut(s) 354, 1018, 1095, 2040, 2058, 2145
TaqI TCGA 5 cut(s) 165, 575, 1136, 1737, 2049
TatI WGTACW 3 cut(s) 120, 964, 2080
TauI GCSGC 1 cut(s) 398
TfiI GAWTC 4 cut(s) 11, 227, 1742, 2001
Tru1I TTAA 5 cut(s) 570, 1668, 1926, 2115, 2156
Tru9I TTAA 5 cut(s) 570, 1668, 1926, 2115, 2156
TscAI CASTG 3 cut(s) 314, 1882, 2179
TseFI GTSAC 2 cut(s) 1453, 2170
TseI GCWGC 7 cut(s) 404, 477, 552, 1535, 1930, 1979, 2347
Tsp45I GTSAC 2 cut(s) 1453, 2170
TspGWI ACGGA 3 cut(s) 183, 593, 2048
TspRI CASTG 3 cut(s) 314, 1882, 2179
Van91I CCANNNNNTGG 1 cut(s) 1394
VneI GTGCAC 1 cut(s) 2235
VpaK11BI GGWCC 1 cut(s) 1171
XapI RAATTY 5 cut(s) 542, 634, 888, 2101, 2310
XceI RCATGY 1 cut(s) 2231
XcmI CCANNNNNNNNNTGG 2 cut(s) 280, 1203
XmiI GTMKAC 4 cut(s) 575, 1114, 1127, 1136
XmnI GAANNNNTTC 3 cut(s) 330, 735, 978
XspI CTAG 5 cut(s) 174, 680, 842, 851, 1118
ZraI GACGTC 1 cut(s) 2143
ZrmI AGTACT 1 cut(s) 2082
Zsp2I ATGCAT 2 cut(s) 872, 1829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.