Rmu_sc0000908.1_g000019

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000908.1
OG0000085
Physical Location & Seq
Reverse (-)
81866 .. 84445
2580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000908.1_g000019.1.cds

Sequence Viewer

Length: 2580 bp
atggctgtcgtatcgcaaaaccccgacctgatgaaaattcaagagacatttgcagaactgctgggctttaaattggaggagaagacagaaattggaagagccattaaattgaaggggaagataatgagaggaaccgggatcctcataatcttggatgacatttggaagagaatagacttttcagacattggaattccgagccacaacgaacttcaaaaatgcaattccaaagtcctactgaccaccagaagattgagtgtttgtgagatcatgatgagccatgcaaaaatccagctcaatatcttatcaaaagaagattcttggagcttatttgtgaaggaagcagggaagtcttttgacaaatcttccaatttctatgatgtagcacgtgaggtggcaagagaatgcgccggtctaccagttgctttgatagcagttgcgagggcccttcgaggtgaaggcttggacggatggaaagaagctgctcgacgactaaaagtgtctcaacctcccatcccggaagatgaggaagatgtgttcaaatgcataaagttaagctatgattacttgaaatctgatgattccaaatcttgcttcttgctttgctgcctgttcccagaagattatgatatcccaattgaatgcttgttcaagtatggaattgggaaaggaatgtttcaagattcctacatgctagaagcccgaggcagaacagattcattggtgaatgcccttaaagattctagcttgcttttggacgctagagatgacagatttgtaaggatgcatgatgtcattcgggatatggcaatacgaatttccttatctgaaggccagccattccttgtgaaagctggctgtgaattgaagaattggccaaagattgatgcacataaaggctgctctgcaatctcactaatgaggaacaaaatttgcaagctacccgaggagttggtatgtccaaatctccagattttattactacaacagaatgattctttaaatgagatcccaaaatcttttttccgaagtcagaatgaattaagagtcttggatcttagctacacttgtatttcattaccaccccaatcaatcagtttcctaaccaaccttcaagctttgtatttagatgattgccagaacataattgacatttctgcaattggaaagcttcacaagcttgagattcttagtatgagaggaaatgctctgagagaattgccaagagaaataggacaattgaccaatctaaggatgctggatgtcagtagtgtttcaaagcgggatgacagtactggtcaattctcgtgtgaacgtatcgccacaattccatctaaagtgatatcaaagttacataaattagaagcattgtacctaaaatgtggattttgggactgggggagtaaaattgatggagaaggagaagaaaccaatattggctttgatgaattagctggtttatcatatttaagcattttggaagtttgcatatcagatgcaaattgcatccctagaagtgttgaggtcgaaccgaattgggtttacttcgatattagtatttgcagtgacagtgatagacagaaggaatttgtgacatttccatctggtgattttggtcataattgtagatccttgggtcttcatagtactgacacaaccataggaagctttccgggctggtttgtcaacactgtggtaaagaatactgagaggctaatttatgtagactgcagagggttaagtaacattcttgtggaatatgaccgtggggggttacatgcactgaaagttctctctgtaggaagtcgctttgagaacttgaaagaattgatgaatgcaataacatgtgttccagatatgcctgtgtttgggaacttggaagagttggaactgttttcgctggatgacctcaagcagttatgtgttggtgagttaccacctggatctctccgcagtctgaaattactgaatgtcagttggtgtcgtaacttggggaatgtgctgttgccatcaaaattgttgcagaaactaccaaatctggaaacactatcttgtaggatgagtggagtggaatatttgtttggatgtgaaggatttgagccgaatcaaacaaatctgaaagtgatagggttgtgggatctagatgtagtaagaagcttatgtaatggtcctgttccacgtggaatgttccaggctctaaaggaattggtcattagcaagtgcaacatccagggcagtgtcttcacatttgatgcagctcagtgtctttttcaattaaaaagccttatggtagccgactgccctgtcttggaaagagtaatcgaagcaaggagggaaacattgaacaacaagaagaccgttcttccaaaattgaagaacttatatttgcgaagtcttccaatgttgtacgagggaagtgctactattgattttgagtgtccttcattagaaaggttgcatctgaaggactgcccccacttatcatttctatcctctgcttctgcttctgcttctgactacttccacagcaggaaccacgtgtcgtcttttttcaattacaatagaaaaaagacacattaa

Protein Analysis

859

Amino Acids

96.75

Weight (kDa)

6.07

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2303
AccI GTMKAC 2 cut(s) 415, 1725
AciI CCGC 2 cut(s) 1282, 1951
AclWI GGATC 7 cut(s) 133, 146, 1003, 1062, 1623, 1951, 2145
AcoI YGGCCR 1 cut(s) 875
AcsI RAATTY 5 cut(s) 36, 192, 816, 930, 1586
AcuI CTGAAG 2 cut(s) 849, 2483
AcvI CACGTG 3 cut(s) 389, 2180, 2539
AfaI GTAC 4 cut(s) 1294, 1373, 1648, 2408
AfiI CCNNNNNNNGG 3 cut(s) 1251, 1868, 2308
AflIII ACRYGT 2 cut(s) 1844, 2538
AjnI CCWGG 3 cut(s) 1939, 2190, 2229
AjuI GAANNNNNNNTTGG 6 cut(s) 578, 610, 1419, 1451, 2064, 2096
AloI GAACNNNNNNTCC 2 cut(s) 521, 553
Alw26I GTCTC 2 cut(s) 38, 507
AlwI GGATC 7 cut(s) 133, 146, 1003, 1062, 1623, 1951, 2145
Ama87I CYCGRG 2 cut(s) 702, 944
AoxI GGCC 3 cut(s) 444, 832, 875
ApaI GGGCCC 1 cut(s) 448
ApeKI GCWGC 4 cut(s) 482, 606, 900, 2255
ApoI RAATTY 5 cut(s) 36, 192, 816, 930, 1586
Asp700I GAANNNNTTC 1 cut(s) 715
AspLEI GCGC 1 cut(s) 410
AspS9I GGNCC 3 cut(s) 444, 445, 2168
AsuC2I CCSGG 3 cut(s) 136, 518, 1674
AsuHPI GGTGA 4 cut(s) 467, 736, 1619, 1940
AvaI CYCGRG 2 cut(s) 702, 944
AvaII GGWCC 1 cut(s) 2168
BaeGI GKGCMC 1 cut(s) 448
BalI TGGCCA 1 cut(s) 877
BamHI GGATCC 1 cut(s) 138
BanII GRGCYC 1 cut(s) 448
BauI CACGAG 1 cut(s) 1306
BbrPI CACGTG 3 cut(s) 389, 2180, 2539
BbsI GAAGAC 5 cut(s) 89, 1631, 2233, 2360, 2387
BbvI GCAGC 4 cut(s) 469, 593, 887, 2267
BccI CCATC 6 cut(s) 465, 521, 1339, 1406, 1609, 2017
BcgI CGANNNNNNTGC 2 cut(s) 2399, 2433
BciT130I CCWGG 3 cut(s) 1941, 2192, 2231
BcnI CCSGG 3 cut(s) 136, 518, 1674
BcoDI GTCTC 2 cut(s) 38, 507
BfaI CTAG 5 cut(s) 695, 744, 762, 1512, 2141
BfmI CTRYAG 2 cut(s) 1729, 1797
BisI GCNGC 4 cut(s) 483, 607, 901, 2256
BlsI GCNGC 4 cut(s) 484, 608, 902, 2257
BmcAI AGTACT 2 cut(s) 1294, 1648
Bme1390I CCNGG 6 cut(s) 136, 518, 1674, 1941, 2192, 2231
Bme18I GGWCC 1 cut(s) 2168
BmeT110I CYCGRG 2 cut(s) 702, 944
BmgT120I GGNCC 3 cut(s) 444, 445, 2168
BmiI GGNNCC 4 cut(s) 133, 140, 446, 2534
BmrFI CCNGG 6 cut(s) 136, 518, 1674, 1941, 2192, 2231
BmrI ACTGGG 1 cut(s) 1405
BmsI GCATC 7 cut(s) 774, 877, 1245, 1486, 1515, 2242, 2467
BmuI ACTGGG 1 cut(s) 1405
BpiI GAAGAC 5 cut(s) 89, 1631, 2233, 2360, 2387
BpmI CTGGAG 1 cut(s) 953
BpuEI CTTGAG 2 cut(s) 1202, 1895
BpuMI CCSGG 3 cut(s) 136, 518, 1674
BsaAI YACGTR 3 cut(s) 389, 2180, 2539
BsaJI CCNNGG 5 cut(s) 703, 945, 1632, 1765, 2230
Bsc4I CCNNNNNNNGG 3 cut(s) 1251, 1868, 2308
Bse118I RCCGGY 1 cut(s) 410
Bse1I ACTGG 3 cut(s) 419, 1300, 1400
BseBI CCWGG 3 cut(s) 1941, 2192, 2231
BseDI CCNNGG 5 cut(s) 703, 945, 1632, 1765, 2230
BseLI CCNNNNNNNGG 3 cut(s) 1251, 1868, 2308
BseMII CTCAG 3 cut(s) 1202, 1698, 2273
BseNI ACTGG 3 cut(s) 419, 1300, 1400
BseRI GAGGAG 2 cut(s) 92, 962
BseSI GKGCMC 1 cut(s) 448
BseXI GCAGC 4 cut(s) 469, 593, 887, 2267
BseYI CCCAGC 1 cut(s) 61
BshFI GGCC 3 cut(s) 446, 834, 877
BsiHKCI CYCGRG 2 cut(s) 702, 944
BsiSI CCGG 4 cut(s) 135, 411, 518, 1673
BslFI GGGAC 1 cut(s) 1406
BslI CCNNNNNNNGG 3 cut(s) 1251, 1868, 2308
BsmAI GTCTC 2 cut(s) 38, 507
BsmFI GGGAC 1 cut(s) 1406
BsmI GAATGC 4 cut(s) 410, 647, 733, 1840
BsnI GGCC 3 cut(s) 446, 834, 877
BsoBI CYCGRG 2 cut(s) 702, 944
Bsp120I GGGCCC 1 cut(s) 444
Bsp1286I GDGCHC 1 cut(s) 448
Bsp143I GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
BspACI CCGC 2 cut(s) 1282, 1951
BspANI GGCC 3 cut(s) 446, 834, 877
BspCNI CTCAG 3 cut(s) 1203, 1699, 2272
BspHI TCATGA 1 cut(s) 270
BspLI GGNNCC 4 cut(s) 133, 140, 446, 2534
BspMAI CTGCAG 1 cut(s) 1733
BspPI GGATC 7 cut(s) 133, 146, 1003, 1062, 1623, 1951, 2145
BspQI GCTCTTC 1 cut(s) 91
BsrFI RCCGGY 1 cut(s) 410
BsrI ACTGG 3 cut(s) 419, 1300, 1400
BssAI RCCGGY 1 cut(s) 410
BssECI CCNNGG 5 cut(s) 703, 945, 1632, 1765, 2230
BssMI GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
BssSI CACGAG 1 cut(s) 1306
BssT1I CCWWGG 1 cut(s) 1632
Bst2BI CACGAG 1 cut(s) 1306
Bst2UI CCWGG 3 cut(s) 1941, 2192, 2231
Bst4CI ACNGT 6 cut(s) 1292, 1571, 1693, 1766, 1893, 2359
Bst6I CTCTTC 3 cut(s) 91, 161, 1875
BstBAI YACGTR 3 cut(s) 389, 2180, 2539
BstC8I GCNNGC 4 cut(s) 749, 836, 856, 938
BstDEI CTNAG 6 cut(s) 1058, 1190, 1211, 1250, 1707, 2259
BstDSI CCRYGG 1 cut(s) 1765
BstHHI GCGC 1 cut(s) 410
BstKTI GATC 7 cut(s) 141, 270, 1011, 1057, 1631, 1946, 2140
BstMAI GTCTC 2 cut(s) 38, 507
BstMBI GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
BstMWI GCNNNNNNNGC 3 cut(s) 431, 1177, 1674
BstNI CCWGG 3 cut(s) 1941, 2192, 2231
BstNSI RCATGY 3 cut(s) 694, 1781, 1848
BstSCI CCNGG 6 cut(s) 134, 516, 1672, 1939, 2190, 2229
BstSFI CTRYAG 2 cut(s) 1729, 1797
BstSLI GKGCMC 1 cut(s) 448
BstV1I GCAGC 4 cut(s) 469, 593, 887, 2267
BstV2I GAAGAC 5 cut(s) 89, 1631, 2233, 2360, 2387
BstX2I RGATCY 6 cut(s) 138, 1008, 1054, 1628, 1943, 2137
BstYI RGATCY 6 cut(s) 138, 1008, 1054, 1628, 1943, 2137
BsuRI GGCC 3 cut(s) 446, 834, 877
BtgI CCRYGG 1 cut(s) 1765
BtsI GCAGTG 2 cut(s) 1570, 2242
BtsIMutI CAGTG 6 cut(s) 1570, 1576, 1689, 1781, 2242, 2267
Cac8I GCNNGC 4 cut(s) 749, 836, 856, 938
CciI TCATGA 1 cut(s) 270
CfoI GCGC 1 cut(s) 410
Cfr10I RCCGGY 1 cut(s) 410
Cfr13I GGNCC 3 cut(s) 444, 445, 2168
CseI GACGC 1 cut(s) 767
Csp6I GTAC 4 cut(s) 1293, 1372, 1647, 2407
CviAII CATG 6 cut(s) 271, 281, 691, 788, 1778, 1845
CviQI GTAC 4 cut(s) 1293, 1372, 1647, 2407
DdeI CTNAG 6 cut(s) 1058, 1190, 1211, 1250, 1707, 2259
DpnI GATC 7 cut(s) 140, 269, 1010, 1056, 1630, 1945, 2139
DpnII GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
DraI TTTAAA 2 cut(s) 70, 1002
DrdI GACNNNNNNGTC 1 cut(s) 2303
DseDI GACNNNNNNGTC 1 cut(s) 2303
EaeI YGGCCR 1 cut(s) 875
Eam1104I CTCTTC 3 cut(s) 91, 161, 1875
EarI CTCTTC 3 cut(s) 91, 161, 1875
Eco130I CCWWGG 1 cut(s) 1632
Eco24I GRGCYC 1 cut(s) 448
Eco32I GATATC 2 cut(s) 631, 1344
Eco47I GGWCC 1 cut(s) 2168
Eco57I CTGAAG 2 cut(s) 849, 2483
Eco72I CACGTG 3 cut(s) 389, 2180, 2539
Eco88I CYCGRG 2 cut(s) 702, 944
EcoO109I RGGNCCY 2 cut(s) 444, 445
EcoRI GAATTC 1 cut(s) 192
EcoRII CCWGG 3 cut(s) 1939, 2190, 2229
EcoRV GATATC 2 cut(s) 631, 1344
EcoT14I CCWWGG 1 cut(s) 1632
EcoT22I ATGCAT 2 cut(s) 548, 789
EcoT38I GRGCYC 1 cut(s) 448
ErhI CCWWGG 1 cut(s) 1632
FaeI CATG 6 cut(s) 274, 284, 694, 791, 1781, 1848
FaqI GGGAC 1 cut(s) 1406
FatI CATG 6 cut(s) 270, 280, 690, 787, 1777, 1844
FauI CCCGC 1 cut(s) 1275
FblI GTMKAC 2 cut(s) 415, 1725
Fnu4HI GCNGC 4 cut(s) 483, 607, 901, 2256
FriOI GRGCYC 1 cut(s) 448
Fsp4HI GCNGC 4 cut(s) 483, 607, 901, 2256
FspBI CTAG 5 cut(s) 695, 744, 762, 1512, 2141
GlaI GCGC 1 cut(s) 409
GluI GCNGC 4 cut(s) 483, 607, 901, 2256
GsaI CCCAGC 1 cut(s) 65
GsuI CTGGAG 1 cut(s) 953
HaeIII GGCC 3 cut(s) 446, 834, 877
HapII CCGG 4 cut(s) 135, 411, 518, 1673
HgaI GACGC 1 cut(s) 767
HhaI GCGC 1 cut(s) 410
Hin1II CATG 6 cut(s) 274, 284, 694, 791, 1781, 1848
Hin6I GCGC 1 cut(s) 408
HinP1I GCGC 1 cut(s) 408
HincII GTYRAC 1 cut(s) 1687
HindII GTYRAC 1 cut(s) 1687
HindIII AAGCTT 5 cut(s) 1116, 1169, 1178, 1666, 2155
HinfI GANTC 9 cut(s) 317, 581, 683, 716, 740, 995, 1047, 1186, 2104
HpaII CCGG 4 cut(s) 135, 411, 518, 1673
HphI GGTGA 4 cut(s) 467, 736, 1619, 1940
Hpy166II GTNNAC 5 cut(s) 416, 1313, 1543, 1687, 1726
Hpy188III TCNNGA 8 cut(s) 41, 271, 680, 800, 970, 1853, 2039, 2141
Hpy8I GTNNAC 5 cut(s) 416, 1313, 1543, 1687, 1726
Hpy99I CGWCG 1 cut(s) 492
HpyCH4III ACNGT 6 cut(s) 1292, 1571, 1693, 1766, 1893, 2359
HpyCH4IV ACGT 4 cut(s) 388, 1315, 2179, 2538
HpyF10VI GCNNNNNNNGC 3 cut(s) 431, 1177, 1674
HpyF3I CTNAG 6 cut(s) 1058, 1190, 1211, 1250, 1707, 2259
HpySE526I ACGT 4 cut(s) 388, 1315, 2179, 2538
Hsp92II CATG 6 cut(s) 274, 284, 694, 791, 1781, 1848
HspAI GCGC 1 cut(s) 408
Kzo9I GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
LguI GCTCTTC 1 cut(s) 91
LmnI GCTCC 1 cut(s) 324
Lsp1109I GCAGC 4 cut(s) 469, 593, 887, 2267
LweI GCATC 7 cut(s) 774, 877, 1245, 1486, 1515, 2242, 2467
MaeI CTAG 5 cut(s) 695, 744, 762, 1512, 2141
MaeII ACGT 4 cut(s) 388, 1315, 2179, 2538
MaeIII GTNAC 7 cut(s) 1350, 1565, 1591, 1742, 1773, 1932, 1985
MalI GATC 7 cut(s) 140, 269, 1010, 1056, 1630, 1945, 2139
MboI GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
MfeI CAATTG 3 cut(s) 636, 1161, 1238
MflI RGATCY 6 cut(s) 138, 1008, 1054, 1628, 1943, 2137
MhlI GDGCHC 1 cut(s) 448
MlsI TGGCCA 1 cut(s) 877
MluNI TGGCCA 1 cut(s) 877
MlyI GAGTC 1 cut(s) 1056
MmeI TCCRAC 1 cut(s) 1866
Mox20I TGGCCA 1 cut(s) 877
Mph1103I ATGCAT 2 cut(s) 548, 789
MroXI GAANNNNTTC 1 cut(s) 715
MscI TGGCCA 1 cut(s) 877
MslI CAYNNNNRTG 1 cut(s) 1751
Msp20I TGGCCA 1 cut(s) 877
MspI CCGG 4 cut(s) 135, 411, 518, 1673
MspR9I CCNGG 6 cut(s) 136, 518, 1674, 1941, 2192, 2231
MunI CAATTG 3 cut(s) 636, 1161, 1238
Mva1269I GAATGC 4 cut(s) 410, 647, 733, 1840
MvaI CCWGG 3 cut(s) 1941, 2192, 2231
MwoI GCNNNNNNNGC 3 cut(s) 431, 1177, 1674
NciI CCSGG 3 cut(s) 136, 518, 1674
NdeII GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
NlaIII CATG 6 cut(s) 274, 284, 694, 791, 1781, 1848
NlaIV GGNNCC 4 cut(s) 133, 140, 446, 2534
NmuCI GTSAC 2 cut(s) 1565, 1591
NsiI ATGCAT 2 cut(s) 548, 789
NspI RCATGY 3 cut(s) 694, 1781, 1848
PagI TCATGA 1 cut(s) 270
PciI ACATGT 1 cut(s) 1844
PciSI GCTCTTC 1 cut(s) 91
PctI GAATGC 4 cut(s) 410, 647, 733, 1840
PdmI GAANNNNTTC 1 cut(s) 715
PfeI GAWTC 8 cut(s) 317, 581, 683, 716, 740, 995, 1186, 2104
PfoI TCCNGGA 1 cut(s) 516
PkrI GCNGC 4 cut(s) 484, 608, 902, 2257
PleI GAGTC 1 cut(s) 1055
PmaCI CACGTG 3 cut(s) 389, 2180, 2539
PmlI CACGTG 3 cut(s) 389, 2180, 2539
PpsI GAGTC 1 cut(s) 1055
Ppu21I YACGTR 3 cut(s) 389, 2180, 2539
PscI ACATGT 1 cut(s) 1844
Psp6I CCWGG 3 cut(s) 1939, 2190, 2229
PspCI CACGTG 3 cut(s) 389, 2180, 2539
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 3 cut(s) 1939, 2190, 2229
PspN4I GGNNCC 4 cut(s) 133, 140, 446, 2534
PspOMI GGGCCC 1 cut(s) 444
PspPI GGNCC 3 cut(s) 444, 445, 2168
PstI CTGCAG 1 cut(s) 1733
PsuI RGATCY 6 cut(s) 138, 1008, 1054, 1628, 1943, 2137
RsaI GTAC 4 cut(s) 1294, 1373, 1648, 2408
RsaNI GTAC 4 cut(s) 1293, 1372, 1647, 2407
RseI CAYNNNNRTG 1 cut(s) 1751
SapI GCTCTTC 1 cut(s) 91
SatI GCNGC 4 cut(s) 483, 607, 901, 2256
Sau3AI GATC 7 cut(s) 138, 267, 1008, 1054, 1628, 1943, 2137
Sau96I GGNCC 3 cut(s) 444, 445, 2168
ScaI AGTACT 2 cut(s) 1294, 1648
SchI GAGTC 1 cut(s) 1056
ScrFI CCNGG 6 cut(s) 136, 518, 1674, 1941, 2192, 2231
SduI GDGCHC 1 cut(s) 448
SfaNI GCATC 7 cut(s) 774, 877, 1245, 1486, 1515, 2242, 2467
SfcI CTRYAG 2 cut(s) 1729, 1797
SinI GGWCC 1 cut(s) 2168
SmiMI CAYNNNNRTG 1 cut(s) 1751
SmlI CTYRAG 2 cut(s) 1181, 1910
SmoI CTYRAG 2 cut(s) 1181, 1910
SsiI CCGC 2 cut(s) 1282, 1951
SspI AATATT 2 cut(s) 1435, 2075
SspMI CTAG 5 cut(s) 695, 744, 762, 1512, 2141
StyD4I CCNGG 6 cut(s) 134, 516, 1672, 1939, 2190, 2229
StyI CCWWGG 1 cut(s) 1632
TaaI ACNGT 6 cut(s) 1292, 1571, 1693, 1766, 1893, 2359
TaiI ACGT 4 cut(s) 391, 1318, 2182, 2541
TaqI TCGA 5 cut(s) 451, 487, 1527, 1548, 2322
TatI WGTACW 2 cut(s) 1292, 1646
TfiI GAWTC 8 cut(s) 317, 581, 683, 716, 740, 995, 1186, 2104
TscAI CASTG 6 cut(s) 1570, 1576, 1696, 1788, 2242, 2267
TseFI GTSAC 2 cut(s) 1565, 1591
TseI GCWGC 4 cut(s) 482, 606, 900, 2255
Tsp45I GTSAC 2 cut(s) 1565, 1591
TspDTI ATGAA 8 cut(s) 47, 708, 1053, 1065, 1461, 1631, 1847, 2433
TspGWI ACGGA 1 cut(s) 483
TspRI CASTG 6 cut(s) 1570, 1576, 1696, 1788, 2242, 2267
VpaK11BI GGWCC 1 cut(s) 2168
XapI RAATTY 5 cut(s) 36, 192, 816, 930, 1586
XbaI TCTAGA 1 cut(s) 2140
XceI RCATGY 3 cut(s) 694, 1781, 1848
XmiI GTMKAC 2 cut(s) 415, 1725
XmnI GAANNNNTTC 1 cut(s) 715
XspI CTAG 5 cut(s) 695, 744, 762, 1512, 2141
ZrmI AGTACT 2 cut(s) 1294, 1648
Zsp2I ATGCAT 2 cut(s) 548, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.