Rmu_sc0000689.1_g000018

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000689.1
OG0000085
Physical Location & Seq
Forward (+)
66589 .. 73115
6527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000689.1_g000018.1.cds

Sequence Viewer

Length: 5034 bp
atggccttggaatccccaacggcctctgcatcacttcctacatcagttgaatcatcggctcctcggtggaagtatgatgtgtttttgagtttcaggggtgaagacactcggcggggttttacttcttatttatacaatgaattgcaaaacagagaaatcaagacattcatggatatcgacggtttggatagaggagaggagatttctcatagtatcctgctagaggcaattcaagaatcaagatttgcaatcgttgttctctcgcgaaattatgcttcttcccctttgtgtttggatgaactcacacagattatgcagtgcatggaaaataaggaaacaattctgccagttttctatcatgtggaaccctctgatgtcgcacatcagagggggagtgattttggagatgccttcgctgcacatgaagagcggtttaaagatcaaaaaaagaggctgatgaaatggagaggcgacttgaacaaaatcagcagcatctctggctgggtatgtgggagtagttatgcacgttctgagccagaaggacacgttgtccaacaaatcgcggaatttgtctgcagcaaacctattgaaattgagtcgacggaagatattgaaacaaaacaagcaatgaatggaacttctcctcgttggaagtatgatgtgtttataaatttcaggggtgaggacactcgtgagggttttctatcctatttacaagctgaattgcaaaagaaaccagcaaacctgatcatagtaaaggaagacggaccacatacaaaagggcgggatatgaaattgtatctccgacaggccataaaagagtcgaggtttgccatcgttattctttcacaaaactttgcttcttcaacatggtgcttggaggaactagaaaggatttttgaatgcatgggaagccaaaatagaattctgccaatcttttatcatgtggatccctctgaggtgcgacatcaacgggggagttttgaagatgccttcattagacaggaagaaagatttcgggataatcatgagaaggtcaggcggtggagagatgttgtatcaatggtggccaatctctctggatggtgttcggataactacaagtatgaaacagaacttatcaaagacgttgtgaaagctgtgtgcagtagactgagcagactagttcagtctacagagtcgacagaagattttgaagcaacaggagatgtcatggaccgaacttctccccagcctgacccagctcctgtgtggaagaatgatgtgctttcgggtttcgggatggaagacactcgcaggggttttgttgcccattcagaccatgaattgcaaaacacaggactaagtaaaacattcaaggatgaagaccagcttgaaaaaggggtagcccacccctcaacatccctttcctcaaccgaaccaagtcctcaaccagctcttgggcagaagaatgatgagtttttgggtttcaggggaaacgaccctcgaaggggttttgtcacccattcaggtcatgaaatacaaaacaccagagtgactaagacattcaccaatgaagaacatctcgaaaaagacatagctgtcacctcttcgtctccgccttcatcagctgaacgagatcctcggccgaagtatgatgtgtttttgagcttcaggggtgaagacactcgtaagggttttatagcctatttataccgtgaattgcaaaaaaccagagtgatcaaaactttcaaggatgacgtgcaactaaaaaaagggacggttatttcttcaaatctcgaaacggcaatcgaccaatcaaggtttgcggtcgttgtgttgtcggagaactatgctacttctgcatggtgtttgaatgaacttacaaagatttatcaatgcaagaaggataagggcacaattttcccaattttttataaggtggaacccactgatgtacgcaatcaagacattgagacgccttttggaaaaggtttcattgagcatgaagctggacaagacattgagacgatgaaccagtggagagctgctctgaaaggagtggctggaatcgcagggtggaatttaaacaactatccgacggaagaagaactaattgccgacattgtgaaacagttatgggagaaagttcttgaagcacccaccggaaattttgaaacatttgcagcgacaaggcaagccatggatgaggtcatggaggtactaaaagatgatcgagtcactgtccttggggtgcatggagtgggtggcgttggaaagacgacgatggtcaaacatgttggtgcacaagctcggaaagatgggctttttgattatgtgattccggttgccatatccaaaagccctgacttggaagagattcaacgcacattggcagaatcactgaaggaggggaccatgagaggaaataggatgcttataatcttggatgacgtctgggagaattttgaactctcgagcattggaattcccagtcaccatgagcttcaaaggtgcaattctaaagttgtactcaccacaaggaaaagcgacgtctgccattttttggggtgccatgctaatgctcagatccttctcaatgttctatcagagggagattctttgaagttattcatggagacgtcggggaagtcctttcatgaatctaccatttcctatgatgaagcgagaaaggtagctcgagaatgcggtggtctcccaaaagcaataaaagcagctgcaaggtcacttcgagataaatacttggacgaatggaatgaagcacttgcaaggcaatttggagatgactgcttggacgaatggaatgaaacagctcatcctgtcaacttcaaagcaaagaatgacgcatttgattcattggcaactcatgatgccacgtcatgcttcttgctatgctgcctattcccagaaaattatgatatcccaattgaaaagttgctgaagtatgggattggaataggtttgtttcaatatgatacacatacaatgcaagaagccagagatagagcacaatctgtggtcaactacctcaaagcttctagattgcttttggacggtacaaagaagggatgcacaaggatgacagatgacattcgaaatctggccatgcccgttatgcggtcccaagaaggtgatgggtttttagtaaaagctggtgaactagagaagtggccagaggcaggattgtggcaaggattttgcttaacaacttctatgtcgtttgtggctaacaatttcgcacccccaggaattacttcccggctgcgcaaaatctgggattggccaaaagatgctcatgaaggctactcaataatctcactcatgaaaaacaagcttcataagcttcccaaatctttggcatgttcagagctccaaattttattgttacaaagtaatgctggtatacgtgacatcccagaaacctttcttcaaagtgctaatgcgctaagggtctttgatcttagcttcactagcatttcatcactaccttcatcattcagtttcctaaccaaccttcaagttttgaatttggatttatgccatgatttaagtaacatatccgttctaggaaaacttaagaaacttgagattcttagtatgagagaacttcctcttaagaaatttccaaaacaaataggagatttgaccagtctaaggatgctggacgtcactggtagagatcttgaaacaatcccatctaaagtgatctcgaggttgtatagattggaagaactacacatgaaatttcagtttgggaagtggggaagtaaaattgaggatgcagttgaagaaaccaatgctgactttgatgagttgactggcttgttggatttaaacattttgggagtttacatatctgatgctgcatgcttgcctagaagtgttgagtacaagccgaattgggtagaatttgatatatgcatcagcagagatgccccttgcatgtcgctccctcaacatgatggtttttcaagaaccttgactcttgacacaacaatcaattgcttaccggattggtttatcagcgttgtgacagagaaagtggagaagctagagtacacggattgtgaagacttaaatgacatcgttgggcaatatgaccatggcagattacttgcactgaaatatctctctgtgaacgggcactgtaagaacttgaaagagataatcaacacaatgacacgggtttcaaataaaccagtatttgagaacttagaacagttgcatctgtaccgcttatattccctcaaggagttatgtgttggtgagctaccacctgggtctctacgcaagctaaagttcttgaaagtgcaaacttgttgtagcttggtgaatgcacttttaccgtcaacattgttgcagagactacaaaatctggaagaaatcatttgtgtaaatctagtaggaatgaaatatgtgtttggatctgatgaagagcttgatccagaaaatattttcttgaggaaattgagggaaatgagattgtctactctagacaaactagtaagcatatgtaatggtcctgctccacatgcaatcttccataatcttaaagttttggcaatttgcaattgcaatgaattgaaaaatctcttcacaataggtgtagctgaatgtctttctcagttggaagacctttccgtactgcagtgtcatagcttggacagagtcattgaagtaagcaatagcttgaacagcaagattaaacttccagcgttgaagaaattagctttgaaagatcttccggtgctcacaaggttctgcactgaaagtgttacaattgaaactgagtgcccttcattggaatacttgtacgtgaagaactgcctccattttgtttaccacttcgacaacaagaaccaagtccacttgaatgatgaacaacatttgaattctatagagaaaaggtgggtgaagtgcataatcggctataagagagctgctgctgcactaggaaaaaaagaaaaaaaaagagatgttcaatggtcccagaacaagattcctcatcagttagcttttgagcgtgcagtgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1677

Amino Acids

190.42

Weight (kDa)

5.84

Isoelectric Point (pI)

44.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 668, 1917, 2420
AasI GACNNNNNNGTC 1 cut(s) 1580
AatII GACGTC 4 cut(s) 2436, 2535, 2624, 3669
Acc16I TGCGCA 1 cut(s) 3266
AccB1I GGYRCC 1 cut(s) 2550
AccB7I CCANNNNNTGG 2 cut(s) 1439, 2545
AccBSI CCGCTC 1 cut(s) 430
AccI GTMKAC 6 cut(s) 599, 1150, 1172, 1181, 3403, 4487
AccII CGCG 2 cut(s) 265, 563
AclWI GGATC 6 cut(s) 944, 957, 1613, 2563, 4432, 4436
AcoI YGGCCR 5 cut(s) 1068, 1625, 3102, 3170, 3281
AcuI CTGAAG 3 cut(s) 1636, 2405, 2960
AcyI GRCGYC 5 cut(s) 1958, 2433, 2532, 2621, 3666
AfaI GTAC 9 cut(s) 1938, 2202, 2511, 3058, 3890, 4058, 4232, 4644, 4814
AflII CTTAAG 2 cut(s) 3575, 3614
AflIII ACRYGT 2 cut(s) 544, 2275
AhdI GACNNNNNGTC 1 cut(s) 548
AhlI ACTAGT 2 cut(s) 1162, 4501
AjiI CACGTC 2 cut(s) 1741, 2877
AjnI CCWGG 2 cut(s) 3244, 4276
AjuI GAANNNNNNNTTGG 2 cut(s) 909, 941
AleI CACNNNNGTG 1 cut(s) 1532
Alw21I GWGCWC 4 cut(s) 2287, 3010, 3372, 4752
Alw26I GTCTC 7 cut(s) 1599, 1949, 2000, 2612, 2699, 4287, 4357
Alw44I GTGCAC 1 cut(s) 2283
AlwI GGATC 6 cut(s) 944, 957, 1613, 2563, 4432, 4436
AlwNI CAGNNNCTG 1 cut(s) 1247
Ama87I CYCGRG 3 cut(s) 2455, 2679, 3709
AoxI GGCC 8 cut(s) 3, 21, 810, 1068, 1625, 3102, 3170, 3281
ApaLI GTGCAC 1 cut(s) 2283
Asp700I GAANNNNTTC 6 cut(s) 339, 1014, 2358, 2609, 3253, 3423
AspLEI GCGC 2 cut(s) 3267, 3445
AspS9I GGNCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
AsuC2I CCSGG 1 cut(s) 3259
AsuII TTCGAA 1 cut(s) 3094
AvaI CYCGRG 3 cut(s) 2455, 2679, 3709
AvaII GGWCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
BaeGI GKGCMC 4 cut(s) 1898, 2287, 4146, 4796
BalI TGGCCA 4 cut(s) 1070, 3104, 3172, 3283
BamHI GGATCC 1 cut(s) 949
BanI GGYRCC 1 cut(s) 2550
BanII GRGCYC 1 cut(s) 3372
BarI GAAGNNNNNNTAC 2 cut(s) 4040, 4072
BauI CACGAG 1 cut(s) 690
BbsI GAAGAC 7 cut(s) 108, 768, 1293, 1371, 1668, 4077, 4638
Bbv12I GWGCWC 4 cut(s) 2287, 3010, 3372, 4752
BccI CCATC 8 cut(s) 842, 1077, 1276, 2260, 2294, 3128, 3703, 3956
BceAI ACGGC 2 cut(s) 36, 1800
BciT130I CCWGG 2 cut(s) 3246, 4278
BciVI GTATCC 1 cut(s) 224
BclI TGATCA 2 cut(s) 747, 1719
BcnI CCSGG 1 cut(s) 3259
BcoDI GTCTC 7 cut(s) 1599, 1949, 2000, 2612, 2699, 4287, 4357
BcuI ACTAGT 2 cut(s) 1162, 4501
BfmI CTRYAG 4 cut(s) 574, 1173, 4646, 4896
BfrI CTTAAG 2 cut(s) 3575, 3614
BfuI GTATCC 1 cut(s) 224
BglII AGATCT 2 cut(s) 3679, 4738
Bme1390I CCNGG 3 cut(s) 3246, 3259, 4278
Bme18I GGWCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
BmeRI GACNNNNNGTC 1 cut(s) 548
BmeT110I CYCGRG 3 cut(s) 2455, 2679, 3709
BmgBI CACGTC 2 cut(s) 1741, 2877
BmgT120I GGNCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
BmiI GGNNCC 8 cut(s) 60, 366, 951, 1926, 2395, 2552, 3122, 4988
BmrFI CCNGG 3 cut(s) 3246, 3259, 4278
BmrI ACTGGG 1 cut(s) 2466
BmuI ACTGGG 1 cut(s) 2466
BoxI GACNNNNGTC 1 cut(s) 2267
BpiI GAAGAC 7 cut(s) 108, 768, 1293, 1371, 1668, 4077, 4638
BplI GAGNNNNNCTC 2 cut(s) 2014, 2046
Bpu10I CCTNAGC 1 cut(s) 3446
Bpu14I TTCGAA 1 cut(s) 3094
BpuEI CTTGAG 3 cut(s) 3605, 4232, 4480
BpuMI CCSGG 1 cut(s) 3259
BsaAI YACGTR 2 cut(s) 3407, 4816
BsaHI GRCGYC 5 cut(s) 1958, 2433, 2532, 2621, 3666
BsaI GGTCTC 2 cut(s) 2699, 4287
BsaJI CCNNGG 8 cut(s) 6, 62, 1622, 2181, 2227, 3244, 4102, 4277
BsaWI WCCGGW 4 cut(s) 2144, 2323, 4009, 4744
Bse1I ACTGG 7 cut(s) 347, 2017, 2472, 3648, 3676, 3823, 4199
Bse3DI GCAATG 2 cut(s) 633, 4582
BseBI CCWGG 2 cut(s) 3246, 4278
BseDI CCNNGG 8 cut(s) 6, 62, 1622, 2181, 2227, 3244, 4102, 4277
BseMI GCAATG 2 cut(s) 633, 4582
BseMII CTCAG 6 cut(s) 522, 948, 1145, 2579, 4637, 4779
BseNI ACTGG 7 cut(s) 347, 2017, 2472, 3648, 3676, 3823, 4199
BseRI GAGGAG 4 cut(s) 51, 207, 212, 633
BseSI GKGCMC 4 cut(s) 1898, 2287, 4146, 4796
BseX3I CGGCCG 1 cut(s) 1625
BseYI CCCAGC 3 cut(s) 501, 1230, 1240
BsgI GTGCAG 4 cut(s) 402, 1165, 4747, 4932
Bsh1236I CGCG 2 cut(s) 265, 563
Bsh1285I CGRYCG 2 cut(s) 1628, 1812
BshFI GGCC 8 cut(s) 5, 23, 812, 1070, 1627, 3104, 3172, 3283
BshNI GGYRCC 1 cut(s) 2550
BsiEI CGRYCG 2 cut(s) 1628, 1812
BsiHKAI GWGCWC 4 cut(s) 2287, 3010, 3372, 4752
BsiHKCI CYCGRG 3 cut(s) 2455, 2679, 3709
BsiSI CCGG 5 cut(s) 2145, 2324, 3259, 4010, 4745
BslFI GGGAC 4 cut(s) 1771, 2407, 3106, 4972
BsmAI GTCTC 7 cut(s) 1599, 1949, 2000, 2612, 2699, 4287, 4357
BsmBI CGTCTC 4 cut(s) 1599, 1949, 2000, 2612
BsmFI GGGAC 4 cut(s) 1771, 2407, 3106, 4972
BsmI GAATGC 3 cut(s) 908, 2690, 4339
BsnI GGCC 8 cut(s) 5, 23, 812, 1070, 1627, 3104, 3172, 3283
Bso31I GGTCTC 2 cut(s) 2699, 4287
BsoBI CYCGRG 3 cut(s) 2455, 2679, 3709
Bsp119I TTCGAA 1 cut(s) 3094
Bsp1286I GDGCHC 7 cut(s) 1898, 2287, 3010, 3372, 4146, 4752, 4796
Bsp19I CCATGG 2 cut(s) 2181, 4102
Bsp68I TCGCGA 1 cut(s) 265
BspANI GGCC 8 cut(s) 5, 23, 812, 1070, 1627, 3104, 3172, 3283
BspCNI CTCAG 6 cut(s) 523, 949, 1146, 2578, 4636, 4780
BspFNI CGCG 2 cut(s) 265, 563
BspHI TCATGA 6 cut(s) 1027, 1513, 2638, 2866, 3295, 3321
BspLI GGNNCC 8 cut(s) 60, 366, 951, 1926, 2395, 2552, 3122, 4988
BspMAI CTGCAG 2 cut(s) 578, 4650
BspPI GGATC 6 cut(s) 944, 957, 1613, 2563, 4432, 4436
BspQI GCTCTTC 2 cut(s) 420, 4428
BspT104I TTCGAA 1 cut(s) 3094
BspT107I GGYRCC 1 cut(s) 2550
BspTI CTTAAG 2 cut(s) 3575, 3614
BspTNI GGTCTC 2 cut(s) 2699, 4287
BsrBI CCGCTC 1 cut(s) 430
BsrDI GCAATG 2 cut(s) 633, 4582
BsrI ACTGG 7 cut(s) 347, 2017, 2472, 3648, 3676, 3823, 4199
BssECI CCNNGG 8 cut(s) 6, 62, 1622, 2181, 2227, 3244, 4102, 4277
BssNAI GTATAC 1 cut(s) 3404
BssNI GRCGYC 5 cut(s) 1958, 2433, 2532, 2621, 3666
BssSI CACGAG 1 cut(s) 690
BssT1I CCWWGG 4 cut(s) 6, 2181, 2227, 4102
Bst1107I GTATAC 1 cut(s) 3404
Bst2BI CACGAG 1 cut(s) 690
Bst2UI CCWGG 2 cut(s) 3246, 4278
Bst4CI ACNGT 9 cut(s) 182, 1697, 1762, 2115, 2224, 3056, 4148, 4221, 4347
Bst6I CTCTTC 5 cut(s) 420, 1594, 2349, 4428, 4598
BstACI GRCGYC 5 cut(s) 1958, 2433, 2532, 2621, 3666
BstAFI CTTAAG 2 cut(s) 3575, 3614
BstBAI YACGTR 2 cut(s) 3407, 4816
BstBI TTCGAA 1 cut(s) 3094
BstC8I GCNNGC 5 cut(s) 2178, 3868, 3872, 4292, 5025
BstDSI CCRYGG 2 cut(s) 2181, 4102
BstENI CCTNNNNNAGG 1 cut(s) 221
BstFNI CGCG 2 cut(s) 265, 563
BstHHI GCGC 2 cut(s) 3267, 3445
BstMAI GTCTC 7 cut(s) 1599, 1949, 2000, 2612, 2699, 4287, 4357
BstMCI CGRYCG 2 cut(s) 1628, 1812
BstNI CCWGG 2 cut(s) 3246, 4278
BstNSI RCATGY 5 cut(s) 2279, 3363, 3870, 3946, 4535
BstPAI GACNNNNGTC 1 cut(s) 2267
BstSCI CCNGG 3 cut(s) 3244, 3257, 4276
BstSFI CTRYAG 4 cut(s) 574, 1173, 4646, 4896
BstSLI GKGCMC 4 cut(s) 1898, 2287, 4146, 4796
BstUI CGCG 2 cut(s) 265, 563
BstV2I GAAGAC 7 cut(s) 108, 768, 1293, 1371, 1668, 4077, 4638
BstX2I RGATCY 6 cut(s) 949, 1618, 2568, 3679, 4424, 4738
BstXI CCANNNNNNTGG 1 cut(s) 3355
BstYI RGATCY 6 cut(s) 949, 1618, 2568, 3679, 4424, 4738
BstZ17I GTATAC 1 cut(s) 3404
BstZI CGGCCG 1 cut(s) 1625
BsuI GTATCC 1 cut(s) 224
BsuRI GGCC 8 cut(s) 5, 23, 812, 1070, 1627, 3104, 3172, 3283
BtgI CCRYGG 2 cut(s) 2181, 4102
BtrI CACGTC 2 cut(s) 1741, 2877
BtsI GCAGTG 3 cut(s) 323, 4655, 5034
BtuMI TCGCGA 1 cut(s) 265
Cac8I GCNNGC 5 cut(s) 2178, 3868, 3872, 4292, 5025
CaiI CAGNNNCTG 1 cut(s) 1247
CciI TCATGA 6 cut(s) 1027, 1513, 2638, 2866, 3295, 3321
CfoI GCGC 2 cut(s) 3267, 3445
Cfr13I GGNCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
CseI GACGC 2 cut(s) 1966, 2852
Csp6I GTAC 9 cut(s) 1937, 2201, 2510, 3057, 3889, 4057, 4231, 4643, 4813
CviQI GTAC 9 cut(s) 1937, 2201, 2510, 3057, 3889, 4057, 4231, 4643, 4813
DraI TTTAAA 3 cut(s) 436, 2067, 3834
DrdI GACNNNNNNGTC 1 cut(s) 1580
DriI GACNNNNNGTC 1 cut(s) 548
DseDI GACNNNNNNGTC 1 cut(s) 1580
EaeI YGGCCR 5 cut(s) 1068, 1625, 3102, 3170, 3281
EagI CGGCCG 1 cut(s) 1625
Eam1104I CTCTTC 5 cut(s) 420, 1594, 2349, 4428, 4598
Eam1105I GACNNNNNGTC 1 cut(s) 548
EarI CTCTTC 5 cut(s) 420, 1594, 2349, 4428, 4598
EciI GGCGGA 1 cut(s) 1587
Ecl136II GAGCTC 1 cut(s) 3370
EclXI CGGCCG 1 cut(s) 1625
Eco130I CCWWGG 4 cut(s) 6, 2181, 2227, 4102
Eco24I GRGCYC 1 cut(s) 3372
Eco31I GGTCTC 2 cut(s) 2699, 4287
Eco32I GATATC 2 cut(s) 175, 2920
Eco47I GGWCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
Eco52I CGGCCG 1 cut(s) 1625
Eco53kI GAGCTC 1 cut(s) 3370
Eco57I CTGAAG 3 cut(s) 1636, 2405, 2960
Eco88I CYCGRG 3 cut(s) 2455, 2679, 3709
EcoICRI GAGCTC 1 cut(s) 3370
EcoNI CCTNNNNNAGG 1 cut(s) 221
EcoRI GAATTC 3 cut(s) 924, 2466, 4891
EcoRII CCWGG 2 cut(s) 3244, 4276
EcoRV GATATC 2 cut(s) 175, 2920
EcoT14I CCWWGG 4 cut(s) 6, 2181, 2227, 4102
EcoT22I ATGCAT 2 cut(s) 908, 3923
EcoT38I GRGCYC 1 cut(s) 3372
ErhI CCWWGG 4 cut(s) 6, 2181, 2227, 4102
Esp3I CGTCTC 4 cut(s) 1599, 1949, 2000, 2612
FalI AAGNNNNNCTT 4 cut(s) 1356, 1388, 2289, 2321
FaqI GGGAC 4 cut(s) 1771, 2407, 3106, 4972
FauI CCCGC 2 cut(s) 105, 777
FauNDI CATATG 1 cut(s) 4511
FbaI TGATCA 2 cut(s) 747, 1719
FblI GTMKAC 6 cut(s) 599, 1150, 1172, 1181, 3403, 4487
FriOI GRGCYC 1 cut(s) 3372
FspI TGCGCA 1 cut(s) 3266
GlaI GCGC 2 cut(s) 3266, 3444
GsaI CCCAGC 3 cut(s) 505, 1234, 1244
HaeIII GGCC 8 cut(s) 5, 23, 812, 1070, 1627, 3104, 3172, 3283
HapII CCGG 5 cut(s) 2145, 2324, 3259, 4010, 4745
HgaI GACGC 2 cut(s) 1966, 2852
HhaI GCGC 2 cut(s) 3267, 3445
Hin1I GRCGYC 5 cut(s) 1958, 2433, 2532, 2621, 3666
Hin6I GCGC 2 cut(s) 3265, 3443
HinP1I GCGC 2 cut(s) 3265, 3443
HincII GTYRAC 6 cut(s) 600, 1182, 2824, 3022, 3816, 4350
HindII GTYRAC 6 cut(s) 600, 1182, 2824, 3022, 3816, 4350
HindIII AAGCTT 3 cut(s) 3033, 3332, 3341
HpaII CCGG 5 cut(s) 2145, 2324, 3259, 4010, 4745
Hpy99I CGWCG 6 cut(s) 182, 604, 2083, 2266, 2534, 2626
HpyCH4III ACNGT 9 cut(s) 182, 1697, 1762, 2115, 2224, 3056, 4148, 4221, 4347
Hsp92I GRCGYC 5 cut(s) 1958, 2433, 2532, 2621, 3666
HspAI GCGC 2 cut(s) 3265, 3443
Ksp22I TGATCA 2 cut(s) 747, 1719
LguI GCTCTTC 2 cut(s) 420, 4428
LmnI GCTCC 5 cut(s) 64, 1249, 3375, 3954, 4531
MbiI CCGCTC 1 cut(s) 430
MfeI CAATTG 4 cut(s) 2925, 4000, 4570, 4779
MflI RGATCY 6 cut(s) 949, 1618, 2568, 3679, 4424, 4738
MhlI GDGCHC 7 cut(s) 1898, 2287, 3010, 3372, 4146, 4752, 4796
MlsI TGGCCA 4 cut(s) 1070, 3104, 3172, 3283
MluNI TGGCCA 4 cut(s) 1070, 3104, 3172, 3283
MlyI GAGTC 6 cut(s) 605, 830, 1187, 2226, 3976, 4677
MmeI TCCRAC 8 cut(s) 577, 629, 829, 1803, 2102, 2233, 3807, 4608
Mox20I TGGCCA 4 cut(s) 1070, 3104, 3172, 3283
Mph1103I ATGCAT 2 cut(s) 908, 3923
MroXI GAANNNNTTC 6 cut(s) 339, 1014, 2358, 2609, 3253, 3423
MscI TGGCCA 4 cut(s) 1070, 3104, 3172, 3283
MslI CAYNNNNRTG 5 cut(s) 1532, 2280, 2559, 3077, 4872
Msp20I TGGCCA 4 cut(s) 1070, 3104, 3172, 3283
MspA1I CMGCKG 2 cut(s) 1610, 2717
MspCI CTTAAG 2 cut(s) 3575, 3614
MspI CCGG 5 cut(s) 2145, 2324, 3259, 4010, 4745
MspR9I CCNGG 3 cut(s) 3246, 3259, 4278
MunI CAATTG 4 cut(s) 2925, 4000, 4570, 4779
Mva1269I GAATGC 3 cut(s) 908, 2690, 4339
MvaI CCWGG 2 cut(s) 3246, 4278
MvnI CGCG 2 cut(s) 265, 563
NciI CCSGG 1 cut(s) 3259
NcoI CCATGG 2 cut(s) 2181, 4102
NdeI CATATG 1 cut(s) 4511
NlaIV GGNNCC 8 cut(s) 60, 366, 951, 1926, 2395, 2552, 3122, 4988
NmeAIII GCCGAG 2 cut(s) 88, 1603
NmuCI GTSAC 9 cut(s) 1498, 1534, 1582, 2218, 2474, 2724, 3407, 3667, 4030
NruI TCGCGA 1 cut(s) 265
NsbI TGCGCA 1 cut(s) 3266
NsiI ATGCAT 2 cut(s) 908, 3923
NspI RCATGY 5 cut(s) 2279, 3363, 3870, 3946, 4535
NspV TTCGAA 1 cut(s) 3094
OliI CACNNNNGTG 1 cut(s) 1532
PaeI GCATGC 1 cut(s) 3870
PaeR7I CTCGAG 3 cut(s) 2455, 2679, 3709
PagI TCATGA 6 cut(s) 1027, 1513, 2638, 2866, 3295, 3321
PciI ACATGT 1 cut(s) 2275
PciSI GCTCTTC 2 cut(s) 420, 4428
PctI GAATGC 3 cut(s) 908, 2690, 4339
PdmI GAANNNNTTC 6 cut(s) 339, 1014, 2358, 2609, 3253, 3423
PflFI GACNNNGTC 1 cut(s) 4667
PflMI CCANNNNNTGG 2 cut(s) 1439, 2545
PleI GAGTC 6 cut(s) 604, 829, 1186, 2225, 3976, 4676
PpsI GAGTC 6 cut(s) 604, 829, 1186, 2225, 3976, 4676
Ppu21I YACGTR 2 cut(s) 3407, 4816
PscI ACATGT 1 cut(s) 2275
PshAI GACNNNNGTC 1 cut(s) 2267
PsiI TTATAA 3 cut(s) 668, 1917, 2420
Psp124BI GAGCTC 1 cut(s) 3372
Psp6I CCWGG 2 cut(s) 3244, 4276
PspFI CCCAGC 3 cut(s) 501, 1230, 1240
PspGI CCWGG 2 cut(s) 3244, 4276
PspN4I GGNNCC 8 cut(s) 60, 366, 951, 1926, 2395, 2552, 3122, 4988
PspPI GGNCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
PstI CTGCAG 2 cut(s) 578, 4650
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 6 cut(s) 949, 1618, 2568, 3679, 4424, 4738
PsyI GACNNNGTC 1 cut(s) 4667
PvuII CAGCTG 2 cut(s) 1610, 2717
RruI TCGCGA 1 cut(s) 265
RsaI GTAC 9 cut(s) 1938, 2202, 2511, 3058, 3890, 4058, 4232, 4644, 4814
RsaNI GTAC 9 cut(s) 1937, 2201, 2510, 3057, 3889, 4057, 4231, 4643, 4813
RseI CAYNNNNRTG 5 cut(s) 1532, 2280, 2559, 3077, 4872
SacI GAGCTC 1 cut(s) 3372
SalI GTCGAC 2 cut(s) 598, 1180
SapI GCTCTTC 2 cut(s) 420, 4428
Sau96I GGNCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
SchI GAGTC 6 cut(s) 605, 830, 1187, 2226, 3976, 4677
ScrFI CCNGG 3 cut(s) 3246, 3259, 4278
SduI GDGCHC 7 cut(s) 1898, 2287, 3010, 3372, 4146, 4752, 4796
SfcI CTRYAG 4 cut(s) 574, 1173, 4646, 4896
Sfr274I CTCGAG 3 cut(s) 2455, 2679, 3709
SfuI TTCGAA 1 cut(s) 3094
SinI GGWCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
SlaI CTCGAG 3 cut(s) 2455, 2679, 3709
SmiMI CAYNNNNRTG 5 cut(s) 1532, 2280, 2559, 3077, 4872
SmlI CTYRAG 8 cut(s) 2455, 2679, 3575, 3584, 3614, 3709, 4247, 4459
SmoI CTYRAG 8 cut(s) 2455, 2679, 3575, 3584, 3614, 3709, 4247, 4459
SpeI ACTAGT 2 cut(s) 1162, 4501
SphI GCATGC 1 cut(s) 3870
SspI AATATT 1 cut(s) 4453
SstI GAGCTC 1 cut(s) 3372
StyD4I CCNGG 3 cut(s) 3244, 3257, 4276
StyI CCWWGG 4 cut(s) 6, 2181, 2227, 4102
TaaI ACNGT 9 cut(s) 182, 1697, 1762, 2115, 2224, 3056, 4148, 4221, 4347
TaqII GACCGA 1 cut(s) 1233
TatI WGTACW 3 cut(s) 2509, 3888, 4056
TseFI GTSAC 9 cut(s) 1498, 1534, 1582, 2218, 2474, 2724, 3407, 3667, 4030
Tsp45I GTSAC 9 cut(s) 1498, 1534, 1582, 2218, 2474, 2724, 3407, 3667, 4030
TspGWI ACGGA 6 cut(s) 617, 780, 2096, 3550, 4076, 4630
Tth111I GACNNNGTC 1 cut(s) 4667
Van91I CCANNNNNTGG 2 cut(s) 1439, 2545
Vha464I CTTAAG 2 cut(s) 3575, 3614
VneI GTGCAC 1 cut(s) 2283
VpaK11BI GGWCC 6 cut(s) 767, 1216, 2394, 3120, 4520, 4986
XagI CCTNNNNNAGG 1 cut(s) 221
XbaI TCTAGA 2 cut(s) 3038, 4492
XceI RCATGY 5 cut(s) 2279, 3363, 3870, 3946, 4535
XcmI CCANNNNNNNNNTGG 2 cut(s) 1248, 3131
XhoI CTCGAG 3 cut(s) 2455, 2679, 3709
XmiI GTMKAC 6 cut(s) 599, 1150, 1172, 1181, 3403, 4487
XmnI GAANNNNTTC 6 cut(s) 339, 1014, 2358, 2609, 3253, 3423
ZraI GACGTC 4 cut(s) 2434, 2533, 2622, 3667
Zsp2I ATGCAT 2 cut(s) 908, 3923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.