Rw5G047840

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
82894985 .. 82899780
4796 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G047840.1

Sequence Viewer

Length: 3378 bp
ATGGAGTTCTATTTCTTCCAGATGTCGTTGGCGATCATTGTGGTAATTGTGACATGGATCGGTTGCAAGGCCATTATTAAGTGGATAGGGACCCGAGTGGAGCGTTGGTCTTGGTTCAGTTATATGGTCCGAAAGTCGCAGGATAATCAAGTACTGGTTAACATGGATACCTCTGAATCTCTTCCTTCATCATCAGCACCTCGTCCCTCGAAGTATGATGTGTTTTTGAGTTTCAGGGGTGCTGACACTCGCAAGGGGATTACAGTCGACATCCACGATCGATTAAAGGCGAGGGGAATTAAAACATTCATGGATGATCGAGATCTTGAAGTTGGGGATGCTATTTCTCCCACTCTCCTAAAGGCTATTGAAGAATCAAGGTTTGCAATTGTTGTTCTCTCGCGAGACTACGCTTCTTCTACTTGGTGTTTGGAGGAACTTGCAAAGATCTGTGAGTGCATGGAAGATCAAAACAGAATTCTTCCACTCTTTTATCACGTGGAGCCATCTGATGTTCGATTTCAGAAGAAAAGTTTTGAAGAAGCTTTCTCTAAACATGGAACCTCTAGGCGACACAAATCGGAGAAGATGAAGCAATGGAGAGATGCTTTAAACAAAGTGGCCTCTTTCTCTGGGTGGAATACACATGATTATAAGACTGAGAGAGGACTTGTCGAAGCCATTGTGGAACTTCTCAGCAGTAAAGTAGTACCCGATGCAATTGAGTCCACAGGAGATTTCGAAGTATTTGAAGCAACAAGACTAGCCATGGAGGAGGTTATGAAGGCCCTTAAAGATGACGAGGTCACTGCCGTCGGTGTCTACGGCATGGGAGGCGTCGGCAAAACAACCATGGTAAATCATGTCGCTGCACTATCCTGCAAAAATGGGACATTTCATCATGTGACTGTGGCTGTTGTATCCCAAAATCCTGATTTCAGAAGAGTTCAAGATGCATTGGCAGAGCTGCTGGGCTTCAAAATATATGAGAACACAGAAATTGGAAGAGCAGCTAGTTTGAGGAAGGAGATAATGAGGAGAGAAAAACTCCTTATAATCTTGGACGATGTTTGGGAGAGAATAGAGTTGTCAAAGATAGGGATTCCCAGCTACAAGGAGCTTCAAAAGTGCAGATCCAATGTCCTACTCACCACAAGGATATGGAATGTCTGTCATGCCATGGAGTGCCAAAGAAAGATCACCCTCAACGTTCTCTCAGAAGTCGATTCTTGGGCCTTGTTTGTGAGAAAAGCAAGAAGGTCTTTTGAATCGCCCACTTTTGAGGGTGTGGCAAAGAAGGTAGCTGGAGAATGTAGGGGTCTACCGATTGCACTGATAACAGTTGCAAGGGCACTTGGAGATAAAGAACCGGTGGAATGGAAAACAGCTGCTCAACGACTAGAGAAGTCGCAGTCTGCCAACCCTGACGATAAGGGAGATGCATCCACATGTATAAAATTGAGCTATGATTACTTGAAAGATGAGGACTACAAGTCATACTTCTTGCTCTGTTGCTTATTCCCAGAAGACTATGACATCCCAATAGAAGACTTGTTCAGATATGCCTTCGGGAATGGATTGTTTCGAGATGCAGAAACACTCGAAGAGGCCAGAGGTGAAGCTGATTCCGTGGCCAAGCACCTTAAATATTCTACCTTGCTTATGGATGGTAGAAACAATAAATGTGTAAGGATGCATGATGTTGTCCGCGATACAGCCATTCAAATTGCGCAGTCTGAACATGGGTTTTTGGTGAAACCTGGCTGTGGAATAAAGGATTGGCCACGTCAATTACATGAAGGCTACTCTGCAATTTCACTAATGAGGAATGATATTTGCAAGCTACCCGAAAAGTTGGTATGTCCAAAACTCCAGATTTTGTTACTAAACTATAATTCCTCTATAGAAGAGATCCCAGAAACATTTTTTCAAAGTCCAAATGAATTAAGGGTCTTAGATCTTACCTTGACTAGATTTTCATTACTACCCCAATCGATGTGTCTCCTAACGAACCTCCGAGCTTTGTATTTAGATAGTTGTCAGTATCTAAATGACATTTCCATGATCGGAAAACTTAACCAACTTGAGATTTTTAGTATGAGAAACACTTTTTTGAAGGAGTTGTCCAGAGAGATGGGAGATTTGATCAATCTAAGAATGTTGGATATTAGTCATATGATTGAGGGATTTCTTGAAACAATTCCACCCAAAGTGATCTCAAAGTTGCATAATTTAGAAGAACTGTACCTGCAAAGTGGATTTTGGGTGTGGGGGAGTAGAGTTGAGAGGAAAAGATGGGAAACCAATGCTGACTTCGATGAGATTGCTAGCTTGTCCAAGTTAAGAGTTTTGAAGGTTTGTATCCTCGATGCAGAATGTATACCTAAAGATGTTGAGTTCAATCCGAATTGGGTTGAGGTTGATATATGTGTTGGTTTTTTTGACAAGATGAACGCCACTACTCGATATGGTCATAATTCAGTATGCTTGAATCTTGAAACCCTCAGTAGCTTACCAAACTGGTTTTGCAATGCGGTTCTGAACATAGCAGAGAGACTATGGTGGCAGTCAGAGTGTCATCAAAGTTTAAGTGACATATTTGCGGAATATGAGCATGGGAGATTACATGGACTGAAGCATCTCACACTACATGGTTGTAGTCATAGATACAAGCTGAAGAACACATTAACATGGGTTCCAAAAAAACCTGTGTTGGAGAACTTGGAAGAGTTGCATATGTATGGCGTAGACTGCCAAGAGTTATGTGTTGGTGAATTACTGCCCGGGTCTTTATTCAATTTGAAGTTACTGGAGGTACACTATTGTGTCAACTGGGGGAATCTACTTTTACCATCAACATTGTTACAGAGACTACCAAATCTGGAAGAACTAAATTGTAGTTACATGGAGGGGATTGAATATGTGCTTTGGTATAAAGCATTGCTTGAGCCCAAACAATCAAGATTGAGAAAGATAAAATTGTCCAATCTAGATACGGTGAGAAGCATATGTGACGGACCAGCTCCGCCTGCAATGTTCCAGAATCTTCAAAGTTTCTCCATTGACCGGTGCAACTTGCAGGGAAGTCTCTTCACCTTTGATATTGCTCAATGTCTTTCTCAGTTGAATTACTTTGAAGTACGGAAATGCCCCTTATTGGAAAGAATAGTTGAAGCAAGAAACAAGAAGATCATTCTTCCAAAATTAAATGTCTTGACTTTGTTCGCACTTCCAATGTTGTCCTATGAAAGTGCTACTTTTGATATTGAGTGTCCTTCATTGGAACACTTTCGTGTGTGGGACTGCCCCAAGTTTTCAGCCTCTTTTTCTGACTTCCACAGCAGGAAACAAGTCATAACCCAACAGATTGACTATTAG

Protein Analysis

1125

Amino Acids

129.29

Weight (kDa)

6.18

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 71 - 237 1.2e-47 TIR domain
TIR_2 PF13676 74 - 169 4.7e-17 TIR domain
NB-ARC PF00931 257 - 418 3.4e-28 NB-ARC domain
LRR_8 PF13855 622 - 681 1.3e-07 Leucine rich repeat
LRR_14 PF23598 628 - 773 4.1e-10 Leucine-rich repeat region
LRR_RPS2 PF23247 908 - 1050 3.8e-19 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 654, 1055
Acc16I TGCGCA 1 cut(s) 1731
Acc36I ACCTGC 1 cut(s) 2256
AccI GTMKAC 5 cut(s) 267, 822, 1321, 2380, 2748
AccII CGCG 2 cut(s) 403, 1710
AciI CCGC 4 cut(s) 1708, 2534, 2603, 3026
AclI AACGTT 1 cut(s) 1209
AclWI GGATC 3 cut(s) 65, 1128, 1906
AcoI YGGCCR 2 cut(s) 1632, 1781
AcsI RAATTY 1 cut(s) 477
AcuI CTGAAG 2 cut(s) 2654, 2696
AcvI CACGTG 1 cut(s) 499
AcyI GRCGYC 1 cut(s) 837
AfaI GTAC 5 cut(s) 153, 711, 2246, 2817, 3141
AfiI CCNNNNNNNGG 3 cut(s) 1766, 3066, 3157
AflIII ACRYGT 1 cut(s) 1448
AgeI ACCGGT 2 cut(s) 1369, 3066
AhdI GACNNNNNGTC 1 cut(s) 1492
AjiI CACGTC 1 cut(s) 1787
AjnI CCWGG 1 cut(s) 1759
AjuI GAANNNNNNNTTGG 4 cut(s) 1762, 1794, 2297, 2329
AleI CACNNNNGTG 2 cut(s) 2823, 3291
Alw26I GTCTC 5 cut(s) 399, 2006, 2548, 2863, 3092
AlwI GGATC 3 cut(s) 65, 1128, 1906
Ama87I CYCGRG 2 cut(s) 93, 2783
AoxI GGCC 7 cut(s) 69, 621, 786, 1233, 1608, 1632, 1781
ApeKI GCWGC 4 cut(s) 869, 967, 1010, 1388
ApoI RAATTY 1 cut(s) 477
AsiGI ACCGGT 2 cut(s) 1369, 3066
Asp700I GAANNNNTTC 3 cut(s) 180, 2199, 3288
AspLEI GCGC 1 cut(s) 1732
AspS9I GGNCC 5 cut(s) 90, 127, 787, 1233, 3017
AsuC2I CCSGG 2 cut(s) 2784, 2785
AsuHPI GGTGA 7 cut(s) 1141, 1192, 1628, 1765, 2783, 3010, 3085
AsuII TTCGAA 1 cut(s) 741
AsuNHI GCTAGC 1 cut(s) 2327
AvaI CYCGRG 2 cut(s) 93, 2783
AvaII GGWCC 3 cut(s) 90, 127, 3017
BaeGI GKGCMC 1 cut(s) 1354
BalI TGGCCA 2 cut(s) 1634, 1783
BanII GRGCYC 1 cut(s) 2952
BbrPI CACGTG 1 cut(s) 499
BbsI GAAGAC 2 cut(s) 1533, 1554
BbvI GCAGC 4 cut(s) 856, 954, 1022, 1375
BccI CCATC 5 cut(s) 514, 1661, 2128, 2289, 2860
BceAI ACGGC 2 cut(s) 797, 841
BcgI CGANNNNNNTGC 4 cut(s) 791, 825, 2306, 2340
BciT130I CCWGG 1 cut(s) 1761
BciVI GTATCC 3 cut(s) 160, 931, 2372
BclI TGATCA 1 cut(s) 2145
BcnI CCSGG 2 cut(s) 2784, 2785
BcoDI GTCTC 5 cut(s) 399, 2006, 2548, 2863, 3092
BfaI CTAG 7 cut(s) 567, 764, 1014, 1400, 1971, 2328, 2990
BfmI CTRYAG 1 cut(s) 1902
BfuAI ACCTGC 1 cut(s) 2256
BfuI GTATCC 3 cut(s) 160, 931, 2372
BglII AGATCT 3 cut(s) 322, 447, 1957
BisI GCNGC 4 cut(s) 870, 968, 1011, 1389
BlsI GCNGC 4 cut(s) 871, 969, 1012, 1390
BmcAI AGTACT 1 cut(s) 153
Bme1390I CCNGG 3 cut(s) 1761, 2784, 2785
Bme18I GGWCC 3 cut(s) 90, 127, 3017
BmeRI GACNNNNNGTC 1 cut(s) 1492
BmeT110I CYCGRG 2 cut(s) 93, 2783
BmgBI CACGTC 1 cut(s) 1787
BmgT120I GGNCC 5 cut(s) 90, 127, 787, 1233, 3017
BmiI GGNNCC 5 cut(s) 91, 92, 504, 562, 2697
BmrFI CCNGG 3 cut(s) 1761, 2784, 2785
BmrI ACTGGG 1 cut(s) 2842
BmtI GCTAGC 1 cut(s) 2331
BmuI ACTGGG 1 cut(s) 2842
BpiI GAAGAC 2 cut(s) 1533, 1554
BplI GAGNNNNNCTC 2 cut(s) 1032, 1064
BpmI CTGGAG 3 cut(s) 1326, 1856, 2831
Bpu14I TTCGAA 1 cut(s) 741
BpuEI CTTGAG 2 cut(s) 2105, 2966
BpuMI CCSGG 2 cut(s) 2784, 2785
Bsa29I ATCGAT 2 cut(s) 280, 1994
BsaAI YACGTR 1 cut(s) 499
BsaBI GATNNNNATC 1 cut(s) 321
BsaHI GRCGYC 1 cut(s) 837
BsaJI CCNNGG 5 cut(s) 768, 852, 1179, 1629, 2783
BsaWI WCCGGW 2 cut(s) 1369, 3066
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 3 cut(s) 1766, 3066, 3157
Bse118I RCCGGY 2 cut(s) 1369, 3066
Bse1I ACTGG 4 cut(s) 159, 2525, 2814, 2837
Bse3DI GCAATG 4 cut(s) 602, 2536, 2939, 3039
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 1 cut(s) 1761
BseCI ATCGAT 2 cut(s) 280, 1994
BseDI CCNNGG 5 cut(s) 768, 852, 1179, 1629, 2783
BseGI GGATG 7 cut(s) 270, 319, 343, 1442, 1536, 1672, 1698
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 3 cut(s) 1766, 3066, 3157
BseMI GCAATG 4 cut(s) 602, 2536, 2939, 3039
BseMII CTCAG 5 cut(s) 651, 709, 1230, 2518, 3134
BseNI ACTGG 4 cut(s) 159, 2525, 2814, 2837
BseRI GAGGAG 2 cut(s) 788, 1051
BseSI GKGCMC 1 cut(s) 1354
BseXI GCAGC 4 cut(s) 856, 954, 1022, 1375
BseYI CCCAGC 2 cut(s) 970, 1106
BsgI GTGCAG 2 cut(s) 855, 1150
Bsh1236I CGCG 2 cut(s) 403, 1710
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 7 cut(s) 71, 623, 788, 1235, 1610, 1634, 1783
BshTI ACCGGT 2 cut(s) 1369, 3066
BshVI ATCGAT 2 cut(s) 280, 1994
BsiEI CGRYCG 1 cut(s) 280
BsiHKCI CYCGRG 2 cut(s) 93, 2783
BsiSI CCGG 3 cut(s) 1370, 2784, 3067
BslFI GGGAC 4 cut(s) 103, 189, 904, 3314
BslI CCNNNNNNNGG 3 cut(s) 1766, 3066, 3157
BsmAI GTCTC 5 cut(s) 399, 2006, 2548, 2863, 3092
BsmFI GGGAC 4 cut(s) 103, 189, 904, 3314
BsnI GGCC 7 cut(s) 71, 623, 788, 1235, 1610, 1634, 1783
BsoBI CYCGRG 2 cut(s) 93, 2783
Bsp119I TTCGAA 1 cut(s) 741
Bsp1286I GDGCHC 2 cut(s) 1354, 2952
Bsp19I CCATGG 3 cut(s) 768, 852, 1179
Bsp68I TCGCGA 1 cut(s) 403
BspACI CCGC 4 cut(s) 1708, 2534, 2603, 3026
BspANI GGCC 7 cut(s) 71, 623, 788, 1235, 1610, 1634, 1783
BspCNI CTCAG 5 cut(s) 652, 708, 1229, 2517, 3133
BspDI ATCGAT 2 cut(s) 280, 1994
BspFNI CGCG 2 cut(s) 403, 1710
BspLI GGNNCC 5 cut(s) 91, 92, 504, 562, 2697
BspMI ACCTGC 1 cut(s) 2256
BspOI GCTAGC 1 cut(s) 2331
BspPI GGATC 3 cut(s) 65, 1128, 1906
BspQI GCTCTTC 1 cut(s) 1000
BspT104I TTCGAA 1 cut(s) 741
BsrDI GCAATG 4 cut(s) 602, 2536, 2939, 3039
BsrFI RCCGGY 2 cut(s) 1369, 3066
BsrI ACTGG 4 cut(s) 159, 2525, 2814, 2837
BssAI RCCGGY 2 cut(s) 1369, 3066
BssECI CCNNGG 5 cut(s) 768, 852, 1179, 1629, 2783
BssNAI GTATAC 1 cut(s) 2381
BssNI GRCGYC 1 cut(s) 837
BssT1I CCWWGG 3 cut(s) 768, 852, 1179
Bst1107I GTATAC 1 cut(s) 2381
Bst2UI CCWGG 1 cut(s) 1761
Bst4CI ACNGT 5 cut(s) 265, 910, 1342, 2244, 2998
Bst6I CTCTTC 7 cut(s) 186, 937, 1000, 1599, 1902, 2721, 3095
BstACI GRCGYC 1 cut(s) 837
BstBAI YACGTR 1 cut(s) 499
BstBI TTCGAA 1 cut(s) 741
BstC8I GCNNGC 3 cut(s) 1841, 2329, 3030
BstDEI CTNAG 7 cut(s) 660, 695, 1216, 1954, 2153, 2504, 3120
BstDSI CCRYGG 4 cut(s) 768, 852, 1179, 1629
BstF5I GGATG 7 cut(s) 270, 319, 343, 1442, 1536, 1672, 1698
BstFNI CGCG 2 cut(s) 403, 1710
BstHHI GCGC 1 cut(s) 1732
BstMAI GTCTC 5 cut(s) 399, 2006, 2548, 2863, 3092
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 3 cut(s) 834, 2751, 3029
BstNI CCWGG 1 cut(s) 1761
BstNSI RCATGY 1 cut(s) 1452
BstSCI CCNGG 3 cut(s) 1759, 2782, 2783
BstSFI CTRYAG 1 cut(s) 1902
BstSLI GKGCMC 1 cut(s) 1354
BstUI CGCG 2 cut(s) 403, 1710
BstV1I GCAGC 4 cut(s) 856, 954, 1022, 1375
BstV2I GAAGAC 2 cut(s) 1533, 1554
BstX2I RGATCY 5 cut(s) 322, 447, 1133, 1911, 1957
BstXI CCANNNNNNTGG 1 cut(s) 2134
BstYI RGATCY 5 cut(s) 322, 447, 1133, 1911, 1957
BstZ17I GTATAC 1 cut(s) 2381
Bsu15I ATCGAT 2 cut(s) 280, 1994
BsuI GTATCC 3 cut(s) 160, 931, 2372
BsuRI GGCC 7 cut(s) 71, 623, 788, 1235, 1610, 1634, 1783
BsuTUI ATCGAT 2 cut(s) 280, 1994
BtgI CCRYGG 4 cut(s) 768, 852, 1179, 1629
BtrI CACGTC 1 cut(s) 1787
BtsCI GGATG 7 cut(s) 270, 319, 343, 1442, 1536, 1672, 1698
BtsI GCAGTG 1 cut(s) 807
BtsIMutI CAGTG 2 cut(s) 807, 1331
BtuMI TCGCGA 1 cut(s) 403
BveI ACCTGC 1 cut(s) 2256
Cac8I GCNNGC 3 cut(s) 1841, 2329, 3030
CfoI GCGC 1 cut(s) 1732
Cfr10I RCCGGY 2 cut(s) 1369, 3066
Cfr13I GGNCC 5 cut(s) 90, 127, 787, 1233, 3017
Cfr9I CCCGGG 1 cut(s) 2783
ClaI ATCGAT 2 cut(s) 280, 1994
CseI GACGC 1 cut(s) 826
Csp6I GTAC 5 cut(s) 152, 710, 2245, 2816, 3140
CspAI ACCGGT 2 cut(s) 1369, 3066
CviQI GTAC 5 cut(s) 152, 710, 2245, 2816, 3140
DdeI CTNAG 7 cut(s) 660, 695, 1216, 1954, 2153, 2504, 3120
DraI TTTAAA 1 cut(s) 612
DriI GACNNNNNGTC 1 cut(s) 1492
EaeI YGGCCR 2 cut(s) 1632, 1781
Eam1104I CTCTTC 7 cut(s) 186, 937, 1000, 1599, 1902, 2721, 3095
Eam1105I GACNNNNNGTC 1 cut(s) 1492
EarI CTCTTC 7 cut(s) 186, 937, 1000, 1599, 1902, 2721, 3095
EciI GGCGGA 1 cut(s) 3015
Eco130I CCWWGG 3 cut(s) 768, 852, 1179
Eco24I GRGCYC 1 cut(s) 2952
Eco47I GGWCC 3 cut(s) 90, 127, 3017
Eco57I CTGAAG 2 cut(s) 2654, 2696
Eco72I CACGTG 1 cut(s) 499
Eco88I CYCGRG 2 cut(s) 93, 2783
EcoO109I RGGNCCY 2 cut(s) 90, 787
EcoRI GAATTC 1 cut(s) 477
EcoRII CCWGG 1 cut(s) 1759
EcoT14I CCWWGG 3 cut(s) 768, 852, 1179
EcoT22I ATGCAT 3 cut(s) 958, 1444, 1698
EcoT38I GRGCYC 1 cut(s) 2952
ErhI CCWWGG 3 cut(s) 768, 852, 1179
FalI AAGNNNNNCTT 8 cut(s) 1246, 1278, 1484, 1516, 2928, 2960, 3241, 3273
FaqI GGGAC 4 cut(s) 103, 189, 904, 3314
FauNDI CATATG 3 cut(s) 2175, 2736, 3008
FbaI TGATCA 1 cut(s) 2145
FblI GTMKAC 5 cut(s) 267, 822, 1321, 2380, 2748
Fnu4HI GCNGC 4 cut(s) 870, 968, 1011, 1389
FokI GGATG 7 cut(s) 257, 326, 350, 1429, 1523, 1679, 1705
FriOI GRGCYC 1 cut(s) 2952
Fsp4HI GCNGC 4 cut(s) 870, 968, 1011, 1389
FspBI CTAG 7 cut(s) 567, 764, 1014, 1400, 1971, 2328, 2990
FspI TGCGCA 1 cut(s) 1731
GlaI GCGC 1 cut(s) 1731
GluI GCNGC 4 cut(s) 870, 968, 1011, 1389
GsaI CCCAGC 2 cut(s) 974, 1110
GsuI CTGGAG 3 cut(s) 1326, 1856, 2831
HaeIII GGCC 7 cut(s) 71, 623, 788, 1235, 1610, 1634, 1783
HapII CCGG 3 cut(s) 1370, 2784, 3067
HgaI GACGC 1 cut(s) 826
HhaI GCGC 1 cut(s) 1732
Hin1I GRCGYC 1 cut(s) 837
Hin6I GCGC 1 cut(s) 1730
HinP1I GCGC 1 cut(s) 1730
HincII GTYRAC 3 cut(s) 160, 268, 2830
HindII GTYRAC 3 cut(s) 160, 268, 2830
HindIII AAGCTT 1 cut(s) 543
HpaI GTTAAC 1 cut(s) 160
HpaII CCGG 3 cut(s) 1370, 2784, 3067
HphI GGTGA 7 cut(s) 1141, 1192, 1628, 1765, 2783, 3010, 3085
Hpy166II GTNNAC 9 cut(s) 160, 268, 729, 823, 1322, 2381, 2749, 2818, 2830
Hpy8I GTNNAC 9 cut(s) 160, 268, 729, 823, 1322, 2381, 2749, 2818, 2830
Hpy99I CGWCG 2 cut(s) 818, 842
HpyCH4III ACNGT 5 cut(s) 265, 910, 1342, 2244, 2998
HpyCH4IV ACGT 3 cut(s) 498, 1209, 1786
HpyF10VI GCNNNNNNNGC 3 cut(s) 834, 2751, 3029
HpyF3I CTNAG 7 cut(s) 660, 695, 1216, 1954, 2153, 2504, 3120
HpySE526I ACGT 3 cut(s) 498, 1209, 1786
Hsp92I GRCGYC 1 cut(s) 837
HspAI GCGC 1 cut(s) 1730
KflI GGGWCCC 1 cut(s) 90
Ksp22I TGATCA 1 cut(s) 2145
KspAI GTTAAC 1 cut(s) 160
LguI GCTCTTC 1 cut(s) 1000
LmnI GCTCC 4 cut(s) 100, 502, 1117, 3028
Lsp1109I GCAGC 4 cut(s) 856, 954, 1022, 1375
MaeI CTAG 7 cut(s) 567, 764, 1014, 1400, 1971, 2328, 2990
MaeII ACGT 3 cut(s) 498, 1209, 1786
MaeIII GTNAC 9 cut(s) 49, 805, 904, 1881, 2591, 2805, 2862, 2900, 3011
MfeI CAATTG 2 cut(s) 387, 720
MflI RGATCY 5 cut(s) 322, 447, 1133, 1911, 1957
MhlI GDGCHC 2 cut(s) 1354, 2952
MlsI TGGCCA 2 cut(s) 1634, 1783
MluNI TGGCCA 2 cut(s) 1634, 1783
MlyI GAGTC 1 cut(s) 734
MmeI TCCRAC 2 cut(s) 2142, 2694
Mox20I TGGCCA 2 cut(s) 1634, 1783
Mph1103I ATGCAT 3 cut(s) 958, 1444, 1698
MroXI GAANNNNTTC 3 cut(s) 180, 2199, 3288
MscI TGGCCA 2 cut(s) 1634, 1783
MslI CAYNNNNRTG 6 cut(s) 1447, 2060, 2689, 2739, 2823, 3291
Msp20I TGGCCA 2 cut(s) 1634, 1783
MspA1I CMGCKG 1 cut(s) 1388
MspI CCGG 3 cut(s) 1370, 2784, 3067
MspR9I CCNGG 3 cut(s) 1761, 2784, 2785
MunI CAATTG 2 cut(s) 387, 720
MvaI CCWGG 1 cut(s) 1761
MvnI CGCG 2 cut(s) 403, 1710
MwoI GCNNNNNNNGC 3 cut(s) 834, 2751, 3029
NciI CCSGG 2 cut(s) 2784, 2785
NcoI CCATGG 3 cut(s) 768, 852, 1179
NdeI CATATG 3 cut(s) 2175, 2736, 3008
NheI GCTAGC 1 cut(s) 2327
NlaIV GGNNCC 5 cut(s) 91, 92, 504, 562, 2697
NmuCI GTSAC 5 cut(s) 49, 805, 904, 2591, 3011
NruI TCGCGA 1 cut(s) 403
NsbI TGCGCA 1 cut(s) 1731
NsiI ATGCAT 3 cut(s) 958, 1444, 1698
NspI RCATGY 1 cut(s) 1452
NspV TTCGAA 1 cut(s) 741
OliI CACNNNNGTG 2 cut(s) 2823, 3291
PciI ACATGT 1 cut(s) 1448
PciSI GCTCTTC 1 cut(s) 1000
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PdmI GAANNNNTTC 3 cut(s) 180, 2199, 3288
PfeI GAWTC 9 cut(s) 176, 374, 1102, 1226, 1268, 1625, 2491, 2839, 3043
PflFI GACNNNGTC 1 cut(s) 803
PinAI ACCGGT 2 cut(s) 1369, 3066
PkrI GCNGC 4 cut(s) 871, 969, 1012, 1390
Ple19I CGATCG 1 cut(s) 280
PleI GAGTC 1 cut(s) 733
PmaCI CACGTG 1 cut(s) 499
PmlI CACGTG 1 cut(s) 499
PpsI GAGTC 1 cut(s) 733
Ppu21I YACGTR 1 cut(s) 499
PpuMI RGGWCCY 1 cut(s) 90
PscI ACATGT 1 cut(s) 1448
PsiI TTATAA 2 cut(s) 654, 1055
Psp1406I AACGTT 1 cut(s) 1209
Psp5II RGGWCCY 1 cut(s) 90
Psp6I CCWGG 1 cut(s) 1759
PspCI CACGTG 1 cut(s) 499
PspFI CCCAGC 2 cut(s) 970, 1106
PspGI CCWGG 1 cut(s) 1759
PspN4I GGNNCC 5 cut(s) 91, 92, 504, 562, 2697
PspPI GGNCC 5 cut(s) 90, 127, 787, 1233, 3017
PspPPI RGGWCCY 1 cut(s) 90
PsuI RGATCY 5 cut(s) 322, 447, 1133, 1911, 1957
PsyI GACNNNGTC 1 cut(s) 803
PvuI CGATCG 1 cut(s) 280
PvuII CAGCTG 1 cut(s) 1388
RruI TCGCGA 1 cut(s) 403
RsaI GTAC 5 cut(s) 153, 711, 2246, 2817, 3141
RsaNI GTAC 5 cut(s) 152, 710, 2245, 2816, 3140
RseI CAYNNNNRTG 6 cut(s) 1447, 2060, 2689, 2739, 2823, 3291
SalI GTCGAC 1 cut(s) 266
SapI GCTCTTC 1 cut(s) 1000
SatI GCNGC 4 cut(s) 870, 968, 1011, 1389
Sau96I GGNCC 5 cut(s) 90, 127, 787, 1233, 3017
ScaI AGTACT 1 cut(s) 153
SchI GAGTC 1 cut(s) 734
ScrFI CCNGG 3 cut(s) 1761, 2784, 2785
SduI GDGCHC 2 cut(s) 1354, 2952
SfcI CTRYAG 1 cut(s) 1902
SfuI TTCGAA 1 cut(s) 741
SinI GGWCC 3 cut(s) 90, 127, 3017
SmaI CCCGGG 1 cut(s) 2785
SmiMI CAYNNNNRTG 6 cut(s) 1447, 2060, 2689, 2739, 2823, 3291
SmlI CTYRAG 2 cut(s) 2084, 2945
SmoI CTYRAG 2 cut(s) 2084, 2945
SsiI CCGC 4 cut(s) 1708, 2534, 2603, 3026
SspI AATATT 1 cut(s) 1649
SspMI CTAG 7 cut(s) 567, 764, 1014, 1400, 1971, 2328, 2990
StyD4I CCNGG 3 cut(s) 1759, 2782, 2783
StyI CCWWGG 3 cut(s) 768, 852, 1179
TaaI ACNGT 5 cut(s) 265, 910, 1342, 2244, 2998
TaiI ACGT 3 cut(s) 501, 1212, 1789
TatI WGTACW 1 cut(s) 151
TfiI GAWTC 9 cut(s) 176, 374, 1102, 1226, 1268, 1625, 2491, 2839, 3043
TscAI CASTG 2 cut(s) 814, 1338
TseFI GTSAC 5 cut(s) 49, 805, 904, 2591, 3011
TseI GCWGC 4 cut(s) 869, 967, 1010, 1388
Tsp45I GTSAC 5 cut(s) 49, 805, 904, 2591, 3011
TspGWI ACGGA 3 cut(s) 1618, 3030, 3157
TspMI CCCGGG 1 cut(s) 2783
TspRI CASTG 2 cut(s) 814, 1338
Tth111I GACNNNGTC 1 cut(s) 803
VpaK11BI GGWCC 3 cut(s) 90, 127, 3017
XapI RAATTY 1 cut(s) 477
XbaI TCTAGA 1 cut(s) 2989
XceI RCATGY 1 cut(s) 1452
XmaI CCCGGG 1 cut(s) 2783
XmiI GTMKAC 5 cut(s) 267, 822, 1321, 2380, 2748
XmnI GAANNNNTTC 3 cut(s) 180, 2199, 3288
XspI CTAG 7 cut(s) 567, 764, 1014, 1400, 1971, 2328, 2990
ZrmI AGTACT 1 cut(s) 153
Zsp2I ATGCAT 3 cut(s) 958, 1444, 1698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.