RLG00000002106

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
25542647 .. 25551249
8603 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002106

Sequence Viewer

Length: 2910 bp
ATGGCCCTGCTTAGAGCCTCAGCTGAACAGGCTTCTCCTCGTCGGTGGAAGCATGATGTGTTTTTAAGTTTCAGGGGTGAAGACACCCGCAAGGGCATTGTTTCCCATTTATACGATGAGCTGCAAAACAGGAGAGGGATTAAAACATTCAAGGATGATCAGCAGCTTGAAATAGGGACAGCTATTTCTCCAAGTCTCCTAACGGCAATCCAAGAATCATGGTTTGCCATCATTGTTCTCTCGCCAAATTATGCTTCTTCTTCTTGGTGTTTGGATGAACTTATACACATTTTTCAATGCATGGAAGACAAGAACAGAATTCTGCCTCTTTTTTATCACGTTGATCCCTCTGATGTACGCCATCAAAGTGGAAGTTTTCAAGTAGCCTTCACTAAACATGAACAACAGTCTAGGCAAGACATGGACAAGGTCAAGCAGTGGAGAGATGCTTTAAATAAAGTTGCCTATCTCTGTGGCTGGGATGCCAAGAATTATGAATCCGAAAGAGAGCTTGTCAAAAGCATTGTGACATTTGTGTGCAGCAAAGTACTTCAAGTTTCACGACCAATTGAAATCGAGTCTATAATGCATACTGGAGATTTTGAGGCATTTGAAGCAACCAGACAAGCTATGGATAAGGTCATGTCGGCACTTAAAGATGATAACATCACTGTCATTGGCATCAACGGAATGGGAGGTGTCGGCAAAACAACCATGGTTACATATGTTAGTTCACAAGCCAAAAGAGACGGGATCTTCGATCATGTGATTATGGCTTGTATATCTGAAAACCCTGACTTGGTCAAAATTCAAGGCATATTAGCAGATATGTTGGGAATGCAATTGAAAGAGGAGACAGAAATTGGAAGAGCTGGTAGATTGAAGGATAGAATAATGAGAGGAAATAGGATTCTTATTATCTTGGACGACATGTGGAAGAATATAAGTTTATCATGCATAGGAATTCCCAGCTACAATGAGCTTAGAAAGTGTAATTCTAAACTCTTGCTCACCACAAGGAGATTATCTGTTTGTCATGTCATGAGGAGCCAAGCAATCATCCCTCTTAACATCCTATCAAAAGACGATTCTTGGAGCTTGTTTGTAAAGGAAGCGGGACATTCTTTTCATGAATCGACCAGATTTTATGATATAGCGAGGAAGGTAGCTAGAGAATGTGCTGGTCTCCCAATTGCATTGATTACAGTTGCAAGGGCACTGCGATATAAAGACATGGAAGAGTGGGAAGAAGCAGCTCGACGACTAGGGATGTCTCAACCTGCCAACCTTGATGATGAGGGAGATGTTTTCAAATGTATAAAGTTGAGCTATGATTACTTGAAAAGTGATCTTGCCAAGTCATGCTTCTTGCTTTGCTGCCTGTTCCCAGAAGACTATGACATCCGCATTGAAGACTTGCTTAAATATGGGATCAGTCATGGTTTATTTCGAGATTCCAGTACAATGAATGAAGCCAGAGCCAGAATACATTCGGTGGTCAAGTACCTTAAAGCATCAAACTTGCTTTTAGACAGTGAAATAGATGGATGTGTAAGGATGCATGATGTCATTCGGGATATGGCCATATCAACTACATTATCCAAGGATAACAATGGGTTTTTGGTGAAAGCCGGTTTACACAACCTTTCCGAAGAGTTGAAAAGGTCTCGAGTTGAGGAGCGATGGGAGCGTTTAGTCGGTGCAGTATTATGTTGGAAAGGAAAGGAATCAACTTATGAAAATGGGAGCCATGGTACTGGCATTGATGCAAACGTTCAATCTTCATGGCTTGCGAATTGGGAAGTTCAGGAAATCTTGAAAGTTGCTGATGAAATCCAACATAATGATCCCATTGTCAGTAGAATCTTATCCGAGCACAGTTATCATTTGGCACAGTATTTGAATTCTAATAGCGACGGAAGGGGAGTATTACAACTCAAGAGTGGATTGATGTCTATCTTGAAGCAAAAGCAAGCACAGAGGGGGGGTGAAACTGTGGATAGAAGCCAAGACTTTCTTGTCTTACAGAAGTTCTATAAACTTTATAGAGAGAAGAATAATGTAGAAAAGCTGCGGGAGGAAGAAATGAAGTTGAGGGAATCTGGCACAGATCTGGAGGAGTTGGAGAGAAAATCAATTATAAGGAAAAGTGTTTCTGCAACTCTAAGAATTCTGGAGACAGTTTTGGAGCAGCTGGAGGAAACTCGCGAAGAGAAAACGTCTCAAATTGAGGAGCGTGGTACTTGCGATATTGGAAAAACATCTCGAGTTGAGGAGCGATGGGAGCGTATAGTCCATGCAGTACTAAAACGGGAAAGGCTGGGAACTGATGCATACAGGCGGCATGGTACAGGCATTGTTGGAAAAGTTCGATCTTCATTTGCAATTAGCAGGGAAATAAATAAAATTTGGGAAGCTGCAGATGAAATCGAAGATGAAAATCTTATTGCCTCTATAATCTTATGTGAGCAGGGTTATTCATTGGCTCAAGATCTGGATTCTGATAGTGAAGGAAACGGAGTATTACAGTTTAAGGCTGGTCTGATGTGTTACACTAAGCAAGCGCTATCAAAGAGGAGAAGTGCAACCGCAACCATAGATAGAAGTGAAGACTTTGTTCTATTACAACAGTTCTATAAACTTTATAGGGAGAAGAATAATGTCGACAAGCTGCTGCAGGAAAAAATGAAGATGAGGGAGTGTAGTACTTCTTCCAGTGATAACCTTAGAGAGTCCCAGATAACAGCACAGACGAGAAGAGTTTTTGCAACTCTTACAGTTTTGCGGACCGTTTTGGAGATGCAGTCGAAGCAGGATGATACGCAGGAAATTCCTCAAGAGCTGAAACGGCTAATGGAGTCGGATGCAGCAAGGATTGAGGATTTGGACGACTACGATATGAATTTATAA

Protein Analysis

970

Amino Acids

110.97

Weight (kDa)

6.06

Isoelectric Point (pI)

56.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 17 - 184 1.4e-51 TIR domain
TIR_2 PF13676 20 - 133 3.6e-15 TIR domain
NB-ARC PF00931 209 - 374 8.2e-28 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2141, 2908
AasI GACNNNNNNGTC 1 cut(s) 2018
Acc36I ACCTGC 1 cut(s) 1288
AccI GTMKAC 1 cut(s) 2664
AccII CGCG 1 cut(s) 2208
AciI CCGC 7 cut(s) 88, 1115, 1405, 2074, 2341, 2589, 2785
AclI AACGTT 1 cut(s) 1773
AclWI GGATC 4 cut(s) 338, 761, 1439, 1841
AcoI YGGCCR 1 cut(s) 1581
AcsI RAATTY 8 cut(s) 318, 807, 963, 1903, 2169, 2406, 2829, 2902
AfaI GTAC 9 cut(s) 357, 549, 1462, 1505, 1756, 2242, 2304, 2350, 2707
AfeI AGCGCT 1 cut(s) 2565
AfiI CCNNNNNNNGG 1 cut(s) 799
AflIII ACRYGT 1 cut(s) 930
AjuI GAANNNNNNNTTGG 4 cut(s) 238, 270, 1349, 1381
Alw21I GWGCWC 1 cut(s) 1878
Alw26I GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2171, 2226
AlwI GGATC 4 cut(s) 338, 761, 1439, 1841
Ama87I CYCGRG 2 cut(s) 1668, 2265
Aor51HI AGCGCT 1 cut(s) 2565
AoxI GGCC 2 cut(s) 3, 1581
ApoI RAATTY 8 cut(s) 318, 807, 963, 1903, 2169, 2406, 2829, 2902
ArsI GACNNNNNNTTYG 2 cut(s) 740, 772
Asp700I GAANNNNTTC 1 cut(s) 1489
AspLEI GCGC 1 cut(s) 2566
AspS9I GGNCC 2 cut(s) 4, 2787
AsuHPI GGTGA 4 cut(s) 89, 1003, 1636, 2000
AvaI CYCGRG 2 cut(s) 1668, 2265
AvaII GGWCC 1 cut(s) 2787
BaeGI GKGCMC 1 cut(s) 1219
BalI TGGCCA 1 cut(s) 1583
BarI GAAGNNNNNNTAC 2 cut(s) 2695, 2727
BbsI GAAGAC 5 cut(s) 87, 312, 1398, 1419, 2616
Bbv12I GWGCWC 1 cut(s) 1878
BbvCI CCTCAGC 1 cut(s) 19
BccI CCATC 5 cut(s) 236, 369, 1538, 1677, 2274
BceAI ACGGC 2 cut(s) 219, 2864
BclI TGATCA 1 cut(s) 157
BcoDI GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2171, 2226
BfaI CTAG 3 cut(s) 411, 1170, 1265
BfmI CTRYAG 2 cut(s) 2418, 2675
BfoI RGCGCY 1 cut(s) 2567
BfuAI ACCTGC 1 cut(s) 1288
BglII AGATCT 2 cut(s) 2110, 2491
BmcAI AGTACT 3 cut(s) 549, 2304, 2707
Bme18I GGWCC 1 cut(s) 2787
BmeT110I CYCGRG 2 cut(s) 1668, 2265
BmgT120I GGNCC 2 cut(s) 4, 2787
BmiI GGNNCC 2 cut(s) 1049, 1748
BmsI GCATC 9 cut(s) 436, 472, 690, 1523, 1548, 1756, 2320, 2790, 2854
BpiI GAAGAC 5 cut(s) 87, 312, 1398, 1419, 2616
BpmI CTGGAG 4 cut(s) 615, 2135, 2195, 2216
Bpu10I CCTNAGC 1 cut(s) 19
BpuEI CTTGAG 3 cut(s) 1922, 2472, 2820
BsaBI GATNNNNATC 2 cut(s) 1955, 2439
BsaI GGTCTC 2 cut(s) 1190, 1671
BsaJI CCNNGG 3 cut(s) 714, 1602, 1750
BsaXI ACNNNNNCTCC 4 cut(s) 1738, 1768, 2789, 2819
Bsc4I CCNNNNNNNGG 1 cut(s) 799
Bse118I RCCGGY 1 cut(s) 1631
Bse1I ACTGG 4 cut(s) 598, 1458, 1762, 2715
Bse8I GATNNNNATC 2 cut(s) 1955, 2439
BseDI CCNNGG 3 cut(s) 714, 1602, 1750
BseJI GATNNNNATC 2 cut(s) 1955, 2439
BseLI CCNNNNNNNGG 1 cut(s) 799
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 4 cut(s) 598, 1458, 1762, 2715
BseRI GAGGAG 8 cut(s) 27, 866, 1060, 1691, 2132, 2246, 2288, 2590
BseSI GKGCMC 1 cut(s) 1219
BseYI CCCAGC 3 cut(s) 477, 968, 2320
BsgI GTGCAG 2 cut(s) 559, 1722
Bsh1236I CGCG 1 cut(s) 2208
BshFI GGCC 2 cut(s) 5, 1583
BsiHKAI GWGCWC 1 cut(s) 1878
BsiHKCI CYCGRG 2 cut(s) 1668, 2265
BsiSI CCGG 1 cut(s) 1632
BslFI GGGAC 3 cut(s) 190, 1131, 2719
BslI CCNNNNNNNGG 1 cut(s) 799
BsmAI GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2171, 2226
BsmBI CGTCTC 2 cut(s) 741, 2226
BsmFI GGGAC 3 cut(s) 190, 1131, 2719
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 2 cut(s) 5, 1583
Bso31I GGTCTC 2 cut(s) 1190, 1671
BsoBI CYCGRG 2 cut(s) 1668, 2265
Bsp1286I GDGCHC 2 cut(s) 1219, 1878
Bsp19I CCATGG 2 cut(s) 714, 1750
Bsp68I TCGCGA 1 cut(s) 2208
BspACI CCGC 7 cut(s) 88, 1115, 1405, 2074, 2341, 2589, 2785
BspANI GGCC 2 cut(s) 5, 1583
BspCNI CTCAG 1 cut(s) 32
BspFNI CGCG 1 cut(s) 2208
BspHI TCATGA 2 cut(s) 1041, 1129
BspLI GGNNCC 2 cut(s) 1049, 1748
BspMAI CTGCAG 2 cut(s) 2422, 2679
BspMI ACCTGC 1 cut(s) 1288
BspPI GGATC 4 cut(s) 338, 761, 1439, 1841
BspQI GCTCTTC 1 cut(s) 862
BspTNI GGTCTC 2 cut(s) 1190, 1671
BsrFI RCCGGY 1 cut(s) 1631
BsrI ACTGG 4 cut(s) 598, 1458, 1762, 2715
BssAI RCCGGY 1 cut(s) 1631
BssECI CCNNGG 3 cut(s) 714, 1602, 1750
BssT1I CCWWGG 3 cut(s) 714, 1602, 1750
Bst6I CTCTTC 5 cut(s) 862, 1233, 1647, 2205, 2752
BstC8I GCNNGC 3 cut(s) 1791, 1974, 2562
BstDEI CTNAG 6 cut(s) 11, 19, 983, 2165, 2556, 2726
BstDSI CCRYGG 2 cut(s) 714, 1750
BstFNI CGCG 1 cut(s) 2208
BstH2I RGCGCY 1 cut(s) 2567
BstHHI GCGC 1 cut(s) 2566
BstMAI GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2171, 2226
BstMWI GCNNNNNNNGC 6 cut(s) 29, 614, 1687, 2284, 2809, 2848
BstNSI RCATGY 1 cut(s) 934
BstSFI CTRYAG 2 cut(s) 2418, 2675
BstSLI GKGCMC 1 cut(s) 1219
BstUI CGCG 1 cut(s) 2208
BstV2I GAAGAC 5 cut(s) 87, 312, 1398, 1419, 2616
BstX2I RGATCY 3 cut(s) 753, 2110, 2491
BstXI CCANNNNNNTGG 2 cut(s) 368, 1757
BstYI RGATCY 3 cut(s) 753, 2110, 2491
BsuRI GGCC 2 cut(s) 5, 1583
BtgI CCRYGG 2 cut(s) 714, 1750
BtgZI GCGATG 2 cut(s) 1696, 2293
BtsI GCAGTG 2 cut(s) 443, 1217
BtsIMutI CAGTG 5 cut(s) 443, 669, 1217, 1540, 2722
BtuMI TCGCGA 1 cut(s) 2208
BveI ACCTGC 1 cut(s) 1288
Cac8I GCNNGC 3 cut(s) 1791, 1974, 2562
CciI TCATGA 2 cut(s) 1041, 1129
CfoI GCGC 1 cut(s) 2566
Cfr10I RCCGGY 1 cut(s) 1631
Cfr13I GGNCC 2 cut(s) 4, 2787
CpoI CGGWCCG 1 cut(s) 2787
Csp6I GTAC 9 cut(s) 356, 548, 1461, 1504, 1755, 2241, 2303, 2349, 2706
CspI CGGWCCG 1 cut(s) 2787
CviQI GTAC 9 cut(s) 356, 548, 1461, 1504, 1755, 2241, 2303, 2349, 2706
DdeI CTNAG 6 cut(s) 11, 19, 983, 2165, 2556, 2726
DraI TTTAAA 1 cut(s) 453
DrdI GACNNNNNNGTC 1 cut(s) 2018
DseDI GACNNNNNNGTC 1 cut(s) 2018
EaeI YGGCCR 1 cut(s) 1581
Eam1104I CTCTTC 5 cut(s) 862, 1233, 1647, 2205, 2752
EarI CTCTTC 5 cut(s) 862, 1233, 1647, 2205, 2752
Eco130I CCWWGG 3 cut(s) 714, 1602, 1750
Eco31I GGTCTC 2 cut(s) 1190, 1671
Eco47I GGWCC 1 cut(s) 2787
Eco47III AGCGCT 1 cut(s) 2565
Eco88I CYCGRG 2 cut(s) 1668, 2265
EcoRI GAATTC 4 cut(s) 318, 963, 1903, 2169
EcoT14I CCWWGG 3 cut(s) 714, 1602, 1750
EcoT22I ATGCAT 5 cut(s) 302, 591, 959, 1563, 2335
ErhI CCWWGG 3 cut(s) 714, 1602, 1750
Esp3I CGTCTC 2 cut(s) 741, 2226
FalI AAGNNNNNCTT 6 cut(s) 1349, 1381, 1404, 1436, 2001, 2033
FaqI GGGAC 3 cut(s) 190, 1131, 2719
FauI CCCGC 3 cut(s) 95, 1108, 2067
FauNDI CATATG 1 cut(s) 724
FbaI TGATCA 1 cut(s) 157
FblI GTMKAC 1 cut(s) 2664
FspBI CTAG 3 cut(s) 411, 1170, 1265
GlaI GCGC 1 cut(s) 2565
GsaI CCCAGC 3 cut(s) 481, 972, 2324
GsuI CTGGAG 4 cut(s) 615, 2135, 2195, 2216
HaeII RGCGCY 1 cut(s) 2567
HaeIII GGCC 2 cut(s) 5, 1583
HapII CCGG 1 cut(s) 1632
HhaI GCGC 1 cut(s) 2566
Hin6I GCGC 1 cut(s) 2564
HinP1I GCGC 1 cut(s) 2564
HincII GTYRAC 1 cut(s) 2665
HindII GTYRAC 1 cut(s) 2665
HpaII CCGG 1 cut(s) 1632
HphI GGTGA 4 cut(s) 89, 1003, 1636, 2000
Hpy166II GTNNAC 3 cut(s) 734, 1637, 2665
Hpy188I TCNGA 8 cut(s) 352, 502, 787, 1651, 1873, 2503, 2544, 2863
Hpy8I GTNNAC 3 cut(s) 734, 1637, 2665
Hpy99I CGWCG 3 cut(s) 45, 1263, 1919
HpyAV CCTTC 5 cut(s) 397, 877, 1156, 1914, 2504
HpyCH4IV ACGT 3 cut(s) 339, 1773, 2219
HpyF10VI GCNNNNNNNGC 6 cut(s) 29, 614, 1687, 2284, 2809, 2848
HpyF3I CTNAG 6 cut(s) 11, 19, 983, 2165, 2556, 2726
HpySE526I ACGT 3 cut(s) 339, 1773, 2219
HspAI GCGC 1 cut(s) 2564
Ksp22I TGATCA 1 cut(s) 157
LguI GCTCTTC 1 cut(s) 862
LmnI GCTCC 9 cut(s) 1047, 1095, 1678, 1687, 1746, 2188, 2233, 2275, 2284
LweI GCATC 9 cut(s) 436, 472, 690, 1523, 1548, 1756, 2320, 2790, 2854
MaeI CTAG 3 cut(s) 411, 1170, 1265
MaeII ACGT 3 cut(s) 339, 1773, 2219
MaeIII GTNAC 3 cut(s) 526, 718, 2549
MfeI CAATTG 3 cut(s) 567, 842, 1191
MflI RGATCY 3 cut(s) 753, 2110, 2491
MhlI GDGCHC 2 cut(s) 1219, 1878
MlsI TGGCCA 1 cut(s) 1583
MluNI TGGCCA 1 cut(s) 1583
MlyI GAGTC 3 cut(s) 587, 2741, 2867
MmeI TCCRAC 5 cut(s) 1694, 1861, 2103, 2341, 2841
Mox20I TGGCCA 1 cut(s) 1583
Mph1103I ATGCAT 5 cut(s) 302, 591, 959, 1563, 2335
MroXI GAANNNNTTC 1 cut(s) 1489
MscI TGGCCA 1 cut(s) 1583
MseI TTAA 8 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2532
MslI CAYNNNNRTG 2 cut(s) 366, 535
Msp20I TGGCCA 1 cut(s) 1583
MspA1I CMGCKG 2 cut(s) 23, 2194
MspI CCGG 1 cut(s) 1632
MunI CAATTG 3 cut(s) 567, 842, 1191
Mva1269I GAATGC 1 cut(s) 843
MvnI CGCG 1 cut(s) 2208
MwoI GCNNNNNNNGC 6 cut(s) 29, 614, 1687, 2284, 2809, 2848
NcoI CCATGG 2 cut(s) 714, 1750
NdeI CATATG 1 cut(s) 724
NlaIV GGNNCC 2 cut(s) 1049, 1748
NmuCI GTSAC 1 cut(s) 526
NruI TCGCGA 1 cut(s) 2208
NsiI ATGCAT 5 cut(s) 302, 591, 959, 1563, 2335
NspI RCATGY 1 cut(s) 934
PaeR7I CTCGAG 2 cut(s) 1668, 2265
PagI TCATGA 2 cut(s) 1041, 1129
PciI ACATGT 1 cut(s) 930
PciSI GCTCTTC 1 cut(s) 862
PcsI WCGNNNNNNNCGW 1 cut(s) 756
PctI GAATGC 1 cut(s) 843
PdmI GAANNNNTTC 1 cut(s) 1489
PflFI GACNNNGTC 2 cut(s) 428, 800
PleI GAGTC 3 cut(s) 586, 2740, 2866
PpsI GAGTC 3 cut(s) 586, 2740, 2866
PscI ACATGT 1 cut(s) 930
PsiI TTATAA 2 cut(s) 2141, 2908
Psp1406I AACGTT 1 cut(s) 1773
PspFI CCCAGC 3 cut(s) 477, 968, 2320
PspN4I GGNNCC 2 cut(s) 1049, 1748
PspPI GGNCC 2 cut(s) 4, 2787
PstI CTGCAG 2 cut(s) 2422, 2679
PsuI RGATCY 3 cut(s) 753, 2110, 2491
PsyI GACNNNGTC 2 cut(s) 428, 800
PvuII CAGCTG 2 cut(s) 23, 2194
RruI TCGCGA 1 cut(s) 2208
RsaI GTAC 9 cut(s) 357, 549, 1462, 1505, 1756, 2242, 2304, 2350, 2707
RsaNI GTAC 9 cut(s) 356, 548, 1461, 1504, 1755, 2241, 2303, 2349, 2706
RseI CAYNNNNRTG 2 cut(s) 366, 535
Rsr2I CGGWCCG 1 cut(s) 2787
RsrII CGGWCCG 1 cut(s) 2787
SalI GTCGAC 1 cut(s) 2663
SapI GCTCTTC 1 cut(s) 862
SaqAI TTAA 8 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2532
Sau96I GGNCC 2 cut(s) 4, 2787
ScaI AGTACT 3 cut(s) 549, 2304, 2707
SchI GAGTC 3 cut(s) 587, 2741, 2867
SduI GDGCHC 2 cut(s) 1219, 1878
SfaNI GCATC 9 cut(s) 436, 472, 690, 1523, 1548, 1756, 2320, 2790, 2854
SfcI CTRYAG 2 cut(s) 2418, 2675
Sfr274I CTCGAG 2 cut(s) 1668, 2265
SinI GGWCC 1 cut(s) 2787
SlaI CTCGAG 2 cut(s) 1668, 2265
SmiMI CAYNNNNRTG 2 cut(s) 366, 535
SmlI CTYRAG 5 cut(s) 1668, 1937, 2265, 2487, 2835
SmoI CTYRAG 5 cut(s) 1668, 1937, 2265, 2487, 2835
SsiI CCGC 7 cut(s) 88, 1115, 1405, 2074, 2341, 2589, 2785
SspMI CTAG 3 cut(s) 411, 1170, 1265
StyI CCWWGG 3 cut(s) 714, 1602, 1750
TaiI ACGT 3 cut(s) 342, 1776, 2222
TatI WGTACW 4 cut(s) 547, 1460, 2302, 2705
TauI GCSGC 1 cut(s) 2344
Tru1I TTAA 8 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2532
Tru9I TTAA 8 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2532
TscAI CASTG 5 cut(s) 443, 676, 1224, 1540, 2722
TseFI GTSAC 1 cut(s) 526
Tsp45I GTSAC 1 cut(s) 526
TspGWI ACGGA 3 cut(s) 702, 1932, 2532
TspRI CASTG 5 cut(s) 443, 676, 1224, 1540, 2722
Tth111I GACNNNGTC 2 cut(s) 428, 800
VpaK11BI GGWCC 1 cut(s) 2787
XapI RAATTY 8 cut(s) 318, 807, 963, 1903, 2169, 2406, 2829, 2902
XceI RCATGY 1 cut(s) 934
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XhoI CTCGAG 2 cut(s) 1668, 2265
XmiI GTMKAC 1 cut(s) 2664
XmnI GAANNNNTTC 1 cut(s) 1489
XspI CTAG 3 cut(s) 411, 1170, 1265
ZrmI AGTACT 3 cut(s) 549, 2304, 2707
Zsp2I ATGCAT 5 cut(s) 302, 591, 959, 1563, 2335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.