Rmu_sc0007612.1_g000001

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007612.1
OG0000085
Physical Location & Seq
Forward (+)
1 .. 6637
6637 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007612.1_g000001.1.cds

Sequence Viewer

Length: 4880 bp
ccccaacggcctctgcatcacttcctacatcagttgaatcatcggctcctcggtggaagtatgatgtgtttttgagtttcatgggtcaagacactcggcggggttttacttattatctatacaatgaattgcaaaacagagaaatcaagacattcatggatatcgacggaactagtttggatagaggagaggggatttctcaaagtatcctagaggccattcaagaatcaagatttgcaatcgttgttctctcgcgaaattatgcttcttccagttggtgtttggatgaactcacagagattatcaagtgcatggaaaataaggaaacaattctgccagttttctatcatgtgtatccctctgatgtgcgacatcaaaaggggagttttggagatgccttccctgcacatgaagagcggtttaaagatcaaaaagagaggctgatgaaatggagagacgccttgaacaaaatctgcagcatctttggctggttatatgggagttctgagccagaaggacaccttgtgaaacaaatcggggaatttgtctccagcaaacttattgaaattgagtcgacggaagacactgaaacaaaacaagcaatgaatggaacttctcctcgttggaagtatgatgtgtttataaatttcaggggtgaggacactcgtaacggttttctgtcctatttacaagctgaattgcaaaagaaaccagcaaacctgaacatagtaaaggatgacggaccacttgcaaaagggcggaatatacattcgtatctcctaaaggccatggaagagtcgaggtttgccattgttgttttttcgccaaactttgctgcttctacatggtgcttggaggaactagcaaggatttttgaatgcatgggaagccaaaatagaattctgccaatcttttatcatgtggatccctctgttgtgcgacgtcaaagggggagttttgaagatgccttcattagacatgaagaaagatttcaggataatcatgagaaggtcaggcattggagagaggttttatcaatggtagccaacttccctggatggcattcagagagctatgagtacgaaggaaaccttatcaaagacgttgtgaaagaagtgtgcagcagaatagttcagtctacagagtcgacagaagattttgaagcaacaggagataacatggaccgaccttctccccagcctgacccagctcctgtggggaagaatgttgtgctttcgggttccgggatggaagacactcgcaggggttttgtagcccattcagaccatgaattgcaaaacacaggactaagtaaaacattcaaggatgaagaccaccttgaaaaaggggtagccctcccctctgcatctctttcctcaactgaaccaagtcctcaaccagctcttgggcagaagaatgatgagtttttgggtttcaggggaaacgacactcaaaggggttctgtcacccattcaggtcatgaagtacaaaacaccagagtgactaagacattcaccgatgaagaacatcttgaaaaagggatagctgtcccctctacgtctccgccttcatcagccgaacgagatcctcggtcgaagtatgatgtgtttttgagtttcaggggggaagacactcgtaggggttttatagcctatttatatcgtgaattgcaaaacatcagagtgattaaaactttcaaggatgacgtacaactacaaaaagggacggttatttcttcaaatctcctaacggcaatcgaagaatcaaggtttgcgattattgtgttgtcggagaactatgcttcttctgcatggtgtttggatgaacttacaaagatttttcagtgcatggagggtaaggacacaattctcccaattttttataagttggatcccgctgttgtacgatatcaaaaggaagagacaagttttggaaaagctttcattaagcatgaagctagacaagacattgagaagatgaaccagtggagagctgctttaaaaggagtggctggaatctctgggtggcattcaaccaactatccgacggatatagaactaattgaagacattgtgaaacatttgtcgaaggaaatacttcaagcacccactggaaattttgaaacatttgaagcgacaaagcaagccatggataaggtcatgaaggtactaaaagatgatcaagtcactgtccttggggtgcatggagtgggtggcgttggaaagacgacgatggtcaaacatgttggtgcacaagctcagaaagatgggcttttcgatcatgtgattatggttgtcatatccaaaagccctgacttggaagaaattcaacgcacattgtcagaatcactgcacttgaaggaggggatcatgagaggaaataggatgcttataatcttggatgacatctgggagagttttgaactctcgagcattggaattcccagtcaccatgagcttcaaaggtgcaattctaaagttgtactcaccacaagggaaagcaacgtctgccattctatggggtgccatgaccagatccctctcaatgtactgtcagatgtagattctaagaagttattaatggatacgttggggaagccttttgatgaatctactgtttccaatgatgaagcgtggaaggtagctcaagaatgtggtggtcttccaaaagcaataaaagcagctgcaaggtcacttggagataaatacttggatgaatggaatgaagcagttgcaagggcatttggagatgactgcttggacgaatggaatgaaacagctcatcctgtcaacttcaaagctgaggaagacgcatttcattcattggcaactgatgatgccaagtcatgcttcttgctatgctgcctattcccaggaaattatgatatcccaattgaagtgttgctcaggtatgggattggaataggtttgtttcaatatgatacaatgcaagaagccagagatagagcatattctgtggtcaagtacctcaaagcttctagattgcttttggatggtacaaagaagggatgcataaggatgcctgatgacattcgaaatctggccatgtccattgtgcggtacgaagaaggtgatggtttcttagtaaaagctggttgtgaactagaggagtggccagaggcaggattgttgcaaggaattacttcccggctccgcaaaatctgggattggccaatggatgctcatgaaggctacacaataatctcactcatgaaaaacaagcttcataagcttcccgaatctttggtatgttcagagctccaaattttattgttacaaagtaatgctggtatacatgacatcccagaaacctttcttcaaagtcctaatgcgctaagggtctttgatcttagcttcactagtatttcatcactacctccatcattcagtttcttaatcaaccttcaagttttgaatttggatttttgcaaaaatttaagtaacatatccgttctaggaaaacttaagaaacttgagattcttagtatgagagaacttcttcttgagaaatttccaaaacaaataggagatttgaccagtctaaggatgttggacgtcactggtagatatcttaaaactatcccatctaaagtcatctcgaggttgtatagattggaagaactgcacatgaaatttcagtttgggaagtggggaagtaaaattgaggatgcagttgatgaagaaaccaatgctgactttgatgagttgactggcttgtcggatttaaacattttggaagtttacatatctgatgctgcatgcttgcctaaaattgttgagtacaagccgaattgggtagaatttgatatatgcatcagcggacaggtcccttgggttttgctccctcaacatgatggtttttcaagaaccttgactcttgacacaacaatcaataggttaccggattggtttatcagcgttgtgacagagaaagtggagaagctagagtacacaaattgcgaagacttgagtgacgtcgttggggaatatgaccatggcagattactcgcactgaaatgtctctctgtgaacgggtaccataagaaattgaaagagataatcaatacaatgacacggttttcaaataaaccagtatttgagaacttggaagagttgcatctgtactgcttatgttcccttaaggagttatgtgttggtgagctaccttctggttctctatgcaagctgaagttattgaaagtgcaaacttgtcgtagcttggtgaatgcacttttaccatcaatattgttgcagagactacaaaatctggaagaaatcatttgcgtaaatctggaaggaatgaaatatgtatttggatctgatgaagggcttgatccagaaaagattttcttggggaaattgagggagatgagattgtctgctctaaacgaactagtaagcatatgtactggtcctgctccacatgcaatcttccaaaatcttaaagttttggcaatttgcgactgcaaggaactgaaaaatctcttcaaaatagatgtagctgaatgtctttttcagttggaagacctttccatagagtgctgtcgtagcttggacagagtcattgaagcaagcaatagcttgaacagcaagattaaacttccggcgttgaagaacttatctttgaaagatcttccaaagctcacaaggttctgcactgacaggggcactattgaaactgagtgcccttcattggagtatttgtatgtggaaaagtgcttccagtttccgtactttgcttaccatttcgacagcaagaaggtccgcttcaatgataaacaacatttcagttcgctaaagaaaaggtgggaggaagtgcatactcggctttgcactcttgcagatgtccctaatctatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1625

Amino Acids

184.52

Weight (kDa)

5.51

Isoelectric Point (pI)

44.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 643, 1883, 2392
AasI GACNNNNNNGTC 1 cut(s) 3735
AatII GACGTC 3 cut(s) 945, 3578, 3998
Acc65I GGTACC 1 cut(s) 4055
AccB1I GGYRCC 2 cut(s) 2522, 4055
AccB7I CCANNNNNTGG 2 cut(s) 1405, 2517
AccBSI CCGCTC 1 cut(s) 417
AccI GTMKAC 4 cut(s) 574, 1138, 1147, 3312
AccII CGCG 1 cut(s) 255
AciI CCGC 9 cut(s) 99, 417, 759, 1564, 1895, 3078, 3174, 3839, 4785
AclWI GGATC 9 cut(s) 919, 932, 1579, 1885, 1898, 2374, 2529, 4344, 4348
AcoI YGGCCR 3 cut(s) 3062, 3133, 3190
AcuI CTGAAG 1 cut(s) 4228
AcyI GRCGYC 4 cut(s) 458, 942, 3575, 3995
AdeI CACNNNGTG 1 cut(s) 525
AfiI CCNNNNNNNGG 7 cut(s) 1405, 2316, 2517, 3077, 3142, 3563, 4713
AflII CTTAAG 2 cut(s) 3484, 4159
AflIII ACRYGT 1 cut(s) 2241
AhlI ACTAGT 3 cut(s) 172, 3379, 4413
AjnI CCWGG 2 cut(s) 1053, 2871
AjuI GAANNNNNNNTTGG 4 cut(s) 884, 916, 2833, 2865
AleI CACNNNNGTG 1 cut(s) 1498
Alw21I GWGCWC 2 cut(s) 2253, 3281
Alw26I GTCTC 6 cut(s) 449, 552, 1565, 1915, 4045, 4269
Alw44I GTGCAC 1 cut(s) 2249
AlwI GGATC 9 cut(s) 919, 932, 1579, 1885, 1898, 2374, 2529, 4344, 4348
AlwNI CAGNNNCTG 1 cut(s) 1213
Ama87I CYCGRG 2 cut(s) 2427, 3618
AoxI GGCC 6 cut(s) 8, 215, 785, 3062, 3133, 3190
ApaLI GTGCAC 1 cut(s) 2249
ApeKI GCWGC 8 cut(s) 476, 835, 1121, 1993, 2680, 2683, 2861, 3775
AseI ATTAAT 1 cut(s) 2578
Asp700I GAANNNNTTC 7 cut(s) 329, 989, 2096, 2324, 3162, 3332, 3518
Asp718I GGTACC 1 cut(s) 4055
AspLEI GCGC 1 cut(s) 3354
AspS9I GGNCC 5 cut(s) 742, 1182, 3846, 4432, 4782
AsuC2I CCSGG 2 cut(s) 1245, 3168
AsuHPI GGTGA 8 cut(s) 667, 1458, 1506, 2440, 2478, 3103, 4189, 4254
AsuII TTCGAA 1 cut(s) 3054
AvaI CYCGRG 2 cut(s) 2427, 3618
AvaII GGWCC 5 cut(s) 742, 1182, 3846, 4432, 4782
BaeGI GKGCMC 3 cut(s) 2253, 4690, 4708
BaeI ACNNNNGTAYC 2 cut(s) 757, 790
BalI TGGCCA 3 cut(s) 3064, 3135, 3192
BamHI GGATCC 2 cut(s) 924, 1890
BanI GGYRCC 2 cut(s) 2522, 4055
BanII GRGCYC 1 cut(s) 3281
BarI GAAGNNNNNNTAC 2 cut(s) 3952, 3984
BbsI GAAGAC 9 cut(s) 587, 1259, 1337, 1634, 2072, 2653, 2813, 3989, 4550
Bbv12I GWGCWC 2 cut(s) 2253, 3281
BbvCI CCTCAGC 1 cut(s) 2801
BbvI GCAGC 8 cut(s) 488, 822, 1133, 1980, 2670, 2692, 2848, 3762
BceAI ACGGC 2 cut(s) 23, 1766
BcgI CGANNNNNNTGC 4 cut(s) 4008, 4042, 4213, 4247
BciT130I CCWGG 2 cut(s) 1055, 2873
BciVI GTATCC 3 cut(s) 217, 365, 2577
BclI TGATCA 1 cut(s) 2178
BcnI CCSGG 2 cut(s) 1245, 3168
BcoDI GTCTC 6 cut(s) 449, 552, 1565, 1915, 4045, 4269
BcuI ACTAGT 3 cut(s) 172, 3379, 4413
BfmI CTRYAG 2 cut(s) 474, 1139
BfrI CTTAAG 2 cut(s) 3484, 4159
BfuI GTATCC 3 cut(s) 217, 365, 2577
BglII AGATCT 1 cut(s) 4650
BisI GCNGC 8 cut(s) 477, 836, 1122, 1994, 2681, 2684, 2862, 3776
BlsI GCNGC 8 cut(s) 478, 837, 1123, 1995, 2682, 2685, 2863, 3777
Bme1390I CCNGG 4 cut(s) 1055, 1245, 2873, 3168
Bme18I GGWCC 5 cut(s) 742, 1182, 3846, 4432, 4782
BmeT110I CYCGRG 2 cut(s) 2427, 3618
BmgT120I GGNCC 5 cut(s) 742, 1182, 3846, 4432, 4782
BmiI GGNNCC 8 cut(s) 47, 926, 1242, 1892, 2524, 3172, 3848, 4057
BmrFI CCNGG 4 cut(s) 1055, 1245, 2873, 3168
BmrI ACTGGG 1 cut(s) 2438
BmuI ACTGGG 1 cut(s) 2438
BoxI GACNNNNGTC 1 cut(s) 2233
BpiI GAAGAC 9 cut(s) 587, 1259, 1337, 1634, 2072, 2653, 2813, 3989, 4550
BpmI CTGGAG 1 cut(s) 534
Bpu10I CCTNAGC 3 cut(s) 2801, 2905, 3355
Bpu14I TTCGAA 1 cut(s) 3054
BpuEI CTTGAG 4 cut(s) 2630, 3514, 3544, 4008
BpuMI CCSGG 2 cut(s) 1245, 3168
BsaHI GRCGYC 4 cut(s) 458, 942, 3575, 3995
BsaJI CCNNGG 9 cut(s) 49, 788, 1053, 1588, 2147, 2193, 2871, 3850, 4014
BsaWI WCCGGW 1 cut(s) 3921
BsaXI ACNNNNNCTCC 2 cut(s) 4708, 4738
Bsc4I CCNNNNNNNGG 7 cut(s) 1405, 2316, 2517, 3077, 3142, 3563, 4713
Bse3DI GCAATG 1 cut(s) 608
BseBI CCWGG 2 cut(s) 1055, 2873
BseDI CCNNGG 9 cut(s) 49, 788, 1053, 1588, 2147, 2193, 2871, 3850, 4014
BseLI CCNNNNNNNGG 7 cut(s) 1405, 2316, 2517, 3077, 3142, 3563, 4713
BseMI GCAATG 1 cut(s) 608
BseMII CTCAG 5 cut(s) 497, 2272, 2792, 2919, 4691
BseRI GAGGAG 4 cut(s) 38, 200, 608, 3142
BseSI GKGCMC 3 cut(s) 2253, 4690, 4708
BseXI GCAGC 8 cut(s) 488, 822, 1133, 1980, 2670, 2692, 2848, 3762
BseYI CCCAGC 2 cut(s) 1196, 1206
BsgI GTGCAG 5 cut(s) 389, 1140, 2335, 3628, 4659
Bsh1236I CGCG 1 cut(s) 255
Bsh1285I CGRYCG 1 cut(s) 1594
BshFI GGCC 6 cut(s) 10, 217, 787, 3064, 3135, 3192
BshNI GGYRCC 2 cut(s) 2522, 4055
BsiEI CGRYCG 1 cut(s) 1594
BsiHKAI GWGCWC 2 cut(s) 2253, 3281
BsiHKCI CYCGRG 2 cut(s) 2427, 3618
BsiSI CCGG 4 cut(s) 1244, 3168, 3922, 4624
BslFI GGGAC 4 cut(s) 1534, 1737, 3832, 4852
BslI CCNNNNNNNGG 7 cut(s) 1405, 2316, 2517, 3077, 3142, 3563, 4713
BsmAI GTCTC 6 cut(s) 449, 552, 1565, 1915, 4045, 4269
BsmBI CGTCTC 2 cut(s) 449, 1565
BsmFI GGGAC 4 cut(s) 1534, 1737, 3832, 4852
BsmI GAATGC 4 cut(s) 883, 1062, 2028, 4251
BsnI GGCC 6 cut(s) 10, 217, 787, 3064, 3135, 3192
BsoBI CYCGRG 2 cut(s) 2427, 3618
Bsp119I TTCGAA 1 cut(s) 3054
Bsp1286I GDGCHC 4 cut(s) 2253, 3281, 4690, 4708
Bsp19I CCATGG 3 cut(s) 788, 2147, 4014
Bsp68I TCGCGA 1 cut(s) 255
BspACI CCGC 9 cut(s) 99, 417, 759, 1564, 1895, 3078, 3174, 3839, 4785
BspANI GGCC 6 cut(s) 10, 217, 787, 3064, 3135, 3192
BspCNI CTCAG 5 cut(s) 498, 2271, 2793, 2918, 4692
BspFNI CGCG 1 cut(s) 255
BspHI TCATGA 6 cut(s) 1002, 1479, 2159, 2369, 3204, 3230
BspLI GGNNCC 8 cut(s) 47, 926, 1242, 1892, 2524, 3172, 3848, 4057
BspMAI CTGCAG 1 cut(s) 478
BspPI GGATC 9 cut(s) 919, 932, 1579, 1885, 1898, 2374, 2529, 4344, 4348
BspQI GCTCTTC 1 cut(s) 407
BspT104I TTCGAA 1 cut(s) 3054
BspT107I GGYRCC 2 cut(s) 2522, 4055
BspTI CTTAAG 2 cut(s) 3484, 4159
BsrBI CCGCTC 1 cut(s) 417
BsrDI GCAATG 1 cut(s) 608
BssECI CCNNGG 9 cut(s) 49, 788, 1053, 1588, 2147, 2193, 2871, 3850, 4014
BssNAI GTATAC 1 cut(s) 3313
BssNI GRCGYC 4 cut(s) 458, 942, 3575, 3995
BssT1I CCWWGG 5 cut(s) 788, 2147, 2193, 3850, 4014
Bst1107I GTATAC 1 cut(s) 3313
Bst2UI CCWGG 2 cut(s) 1055, 2873
Bst4CI ACNGT 6 cut(s) 673, 1728, 2190, 2552, 2616, 4097
Bst6I CTCTTC 5 cut(s) 407, 788, 1913, 4124, 4510
BstACI GRCGYC 4 cut(s) 458, 942, 3575, 3995
BstAFI CTTAAG 2 cut(s) 3484, 4159
BstAPI GCANNNNNTGC 1 cut(s) 2507
BstBI TTCGAA 1 cut(s) 3054
BstC8I GCNNGC 5 cut(s) 2144, 3780, 3784, 4204, 4593
BstDSI CCRYGG 3 cut(s) 788, 2147, 4014
BstEII GGTNACC 1 cut(s) 3917
BstFNI CGCG 1 cut(s) 255
BstHHI GCGC 1 cut(s) 3354
BstMAI GTCTC 6 cut(s) 449, 552, 1565, 1915, 4045, 4269
BstMCI CGRYCG 1 cut(s) 1594
BstNI CCWGG 2 cut(s) 1055, 2873
BstNSI RCATGY 3 cut(s) 2245, 3782, 4447
BstPAI GACNNNNGTC 1 cut(s) 2233
BstPI GGTNACC 1 cut(s) 3917
BstSCI CCNGG 4 cut(s) 1053, 1243, 2871, 3166
BstSFI CTRYAG 2 cut(s) 474, 1139
BstSLI GKGCMC 3 cut(s) 2253, 4690, 4708
BstUI CGCG 1 cut(s) 255
BstV1I GCAGC 8 cut(s) 488, 822, 1133, 1980, 2670, 2692, 2848, 3762
BstV2I GAAGAC 9 cut(s) 587, 1259, 1337, 1634, 2072, 2653, 2813, 3989, 4550
BstX2I RGATCY 6 cut(s) 924, 1584, 1890, 2534, 4336, 4650
BstYI RGATCY 6 cut(s) 924, 1584, 1890, 2534, 4336, 4650
BstZ17I GTATAC 1 cut(s) 3313
BsuI GTATCC 3 cut(s) 217, 365, 2577
BsuRI GGCC 6 cut(s) 10, 217, 787, 3064, 3135, 3192
BtgI CCRYGG 3 cut(s) 788, 2147, 4014
BtsI GCAGTG 1 cut(s) 2347
BtsIMutI CAGTG 9 cut(s) 584, 1849, 1990, 2108, 2186, 2347, 3578, 4030, 4676
BtuMI TCGCGA 1 cut(s) 255
Cac8I GCNNGC 5 cut(s) 2144, 3780, 3784, 4204, 4593
CaiI CAGNNNCTG 1 cut(s) 1213
CciI TCATGA 6 cut(s) 1002, 1479, 2159, 2369, 3204, 3230
CfoI GCGC 1 cut(s) 3354
Cfr13I GGNCC 5 cut(s) 742, 1182, 3846, 4432, 4782
CseI GACGC 2 cut(s) 466, 2818
DraI TTTAAA 3 cut(s) 423, 2000, 3746
DraIII CACNNNGTG 1 cut(s) 525
DrdI GACNNNNNNGTC 1 cut(s) 3735
DseDI GACNNNNNNGTC 1 cut(s) 3735
EaeI YGGCCR 3 cut(s) 3062, 3133, 3190
Eam1104I CTCTTC 5 cut(s) 407, 788, 1913, 4124, 4510
EarI CTCTTC 5 cut(s) 407, 788, 1913, 4124, 4510
EciI GGCGGA 2 cut(s) 774, 1553
Ecl136II GAGCTC 1 cut(s) 3279
Eco130I CCWWGG 5 cut(s) 788, 2147, 2193, 3850, 4014
Eco24I GRGCYC 1 cut(s) 3281
Eco32I GATATC 4 cut(s) 162, 1909, 2886, 3589
Eco47I GGWCC 5 cut(s) 742, 1182, 3846, 4432, 4782
Eco53kI GAGCTC 1 cut(s) 3279
Eco57I CTGAAG 1 cut(s) 4228
Eco88I CYCGRG 2 cut(s) 2427, 3618
Eco91I GGTNACC 1 cut(s) 3917
EcoICRI GAGCTC 1 cut(s) 3279
EcoO109I RGGNCCY 1 cut(s) 3846
EcoO65I GGTNACC 1 cut(s) 3917
EcoRI GAATTC 2 cut(s) 899, 2438
EcoRII CCWGG 2 cut(s) 1053, 2871
EcoRV GATATC 4 cut(s) 162, 1909, 2886, 3589
EcoT14I CCWWGG 5 cut(s) 788, 2147, 2193, 3850, 4014
EcoT22I ATGCAT 3 cut(s) 883, 3034, 3835
EcoT38I GRGCYC 1 cut(s) 3281
ErhI CCWWGG 5 cut(s) 788, 2147, 2193, 3850, 4014
Esp3I CGTCTC 2 cut(s) 449, 1565
FaqI GGGAC 4 cut(s) 1534, 1737, 3832, 4852
FauI CCCGC 2 cut(s) 92, 1902
FauNDI CATATG 1 cut(s) 4423
FbaI TGATCA 1 cut(s) 2178
FblI GTMKAC 4 cut(s) 574, 1138, 1147, 3312
Fnu4HI GCNGC 8 cut(s) 477, 836, 1122, 1994, 2681, 2684, 2862, 3776
FriOI GRGCYC 1 cut(s) 3281
Fsp4HI GCNGC 8 cut(s) 477, 836, 1122, 1994, 2681, 2684, 2862, 3776
GlaI GCGC 1 cut(s) 3353
GluI GCNGC 8 cut(s) 477, 836, 1122, 1994, 2681, 2684, 2862, 3776
GsaI CCCAGC 2 cut(s) 1200, 1210
GsuI CTGGAG 1 cut(s) 534
HaeIII GGCC 6 cut(s) 10, 217, 787, 3064, 3135, 3192
HapII CCGG 4 cut(s) 1244, 3168, 3922, 4624
HgaI GACGC 2 cut(s) 466, 2818
HhaI GCGC 1 cut(s) 3354
Hin1I GRCGYC 4 cut(s) 458, 942, 3575, 3995
Hin6I GCGC 1 cut(s) 3352
HinP1I GCGC 1 cut(s) 3352
HincII GTYRAC 4 cut(s) 575, 1148, 2790, 3728
HindII GTYRAC 4 cut(s) 575, 1148, 2790, 3728
HindIII AAGCTT 4 cut(s) 1937, 2993, 3241, 3250
HpaII CCGG 4 cut(s) 1244, 3168, 3922, 4624
HphI GGTGA 8 cut(s) 667, 1458, 1506, 2440, 2478, 3103, 4189, 4254
Hpy99I CGWCG 6 cut(s) 169, 579, 944, 2049, 2232, 4000
HpyCH4III ACNGT 6 cut(s) 673, 1728, 2190, 2552, 2616, 4097
HpyCH4IV ACGT 8 cut(s) 942, 1103, 1558, 1706, 2504, 2587, 3575, 3995
HpySE526I ACGT 8 cut(s) 942, 1103, 1558, 1706, 2504, 2587, 3575, 3995
Hsp92I GRCGYC 4 cut(s) 458, 942, 3575, 3995
HspAI GCGC 1 cut(s) 3352
KpnI GGTACC 1 cut(s) 4059
Ksp22I TGATCA 1 cut(s) 2178
LguI GCTCTTC 1 cut(s) 407
LmnI GCTCC 6 cut(s) 51, 1215, 3176, 3284, 3866, 4443
Lsp1109I GCAGC 8 cut(s) 488, 822, 1133, 1980, 2670, 2692, 2848, 3762
MaeII ACGT 8 cut(s) 942, 1103, 1558, 1706, 2504, 2587, 3575, 3995
MbiI CCGCTC 1 cut(s) 417
MfeI CAATTG 1 cut(s) 2891
MflI RGATCY 6 cut(s) 924, 1584, 1890, 2534, 4336, 4650
MhlI GDGCHC 4 cut(s) 2253, 3281, 4690, 4708
MlsI TGGCCA 3 cut(s) 3064, 3135, 3192
MluNI TGGCCA 3 cut(s) 3064, 3135, 3192
MlyI GAGTC 5 cut(s) 580, 805, 1153, 3888, 4589
MmeI TCCRAC 8 cut(s) 604, 1769, 1868, 2068, 2199, 3551, 3719, 4520
Mox20I TGGCCA 3 cut(s) 3064, 3135, 3192
Mph1103I ATGCAT 3 cut(s) 883, 3034, 3835
MroXI GAANNNNTTC 7 cut(s) 329, 989, 2096, 2324, 3162, 3332, 3518
MscI TGGCCA 3 cut(s) 3064, 3135, 3192
MslI CAYNNNNRTG 5 cut(s) 1498, 1681, 2246, 3037, 4035
Msp20I TGGCCA 3 cut(s) 3064, 3135, 3192
MspA1I CMGCKG 3 cut(s) 1897, 2683, 3839
MspCI CTTAAG 2 cut(s) 3484, 4159
MspI CCGG 4 cut(s) 1244, 3168, 3922, 4624
MspR9I CCNGG 4 cut(s) 1055, 1245, 2873, 3168
MunI CAATTG 1 cut(s) 2891
Mva1269I GAATGC 4 cut(s) 883, 1062, 2028, 4251
MvaI CCWGG 2 cut(s) 1055, 2873
MvnI CGCG 1 cut(s) 255
NciI CCSGG 2 cut(s) 1245, 3168
NcoI CCATGG 3 cut(s) 788, 2147, 4014
NdeI CATATG 1 cut(s) 4423
NlaIV GGNNCC 8 cut(s) 47, 926, 1242, 1892, 2524, 3172, 3848, 4057
NmeAIII GCCGAG 2 cut(s) 75, 4824
NmuCI GTSAC 8 cut(s) 1464, 1500, 2184, 2446, 2690, 3576, 3942, 3991
NruI TCGCGA 1 cut(s) 255
NsiI ATGCAT 3 cut(s) 883, 3034, 3835
NspI RCATGY 3 cut(s) 2245, 3782, 4447
NspV TTCGAA 1 cut(s) 3054
OliI CACNNNNGTG 1 cut(s) 1498
PaeI GCATGC 1 cut(s) 3782
PaeR7I CTCGAG 2 cut(s) 2427, 3618
PagI TCATGA 6 cut(s) 1002, 1479, 2159, 2369, 3204, 3230
PciI ACATGT 1 cut(s) 2241
PciSI GCTCTTC 1 cut(s) 407
PctI GAATGC 4 cut(s) 883, 1062, 2028, 4251
PdmI GAANNNNTTC 7 cut(s) 329, 989, 2096, 2324, 3162, 3332, 3518
PfeI GAWTC 9 cut(s) 37, 226, 1762, 2015, 2344, 2563, 2608, 3259, 3498
PflFI GACNNNGTC 1 cut(s) 4579
PflMI CCANNNNNTGG 2 cut(s) 1405, 2517
PfoI TCCNGGA 1 cut(s) 1243
PkrI GCNGC 8 cut(s) 478, 837, 1123, 1995, 2682, 2685, 2863, 3777
PleI GAGTC 5 cut(s) 579, 804, 1152, 3888, 4588
PpsI GAGTC 5 cut(s) 579, 804, 1152, 3888, 4588
PpuMI RGGWCCY 1 cut(s) 3846
PscI ACATGT 1 cut(s) 2241
PshAI GACNNNNGTC 1 cut(s) 2233
PshBI ATTAAT 1 cut(s) 2578
PsiI TTATAA 3 cut(s) 643, 1883, 2392
Psp124BI GAGCTC 1 cut(s) 3281
Psp5II RGGWCCY 1 cut(s) 3846
Psp6I CCWGG 2 cut(s) 1053, 2871
PspEI GGTNACC 1 cut(s) 3917
PspFI CCCAGC 2 cut(s) 1196, 1206
PspGI CCWGG 2 cut(s) 1053, 2871
PspN4I GGNNCC 8 cut(s) 47, 926, 1242, 1892, 2524, 3172, 3848, 4057
PspPI GGNCC 5 cut(s) 742, 1182, 3846, 4432, 4782
PspPPI RGGWCCY 1 cut(s) 3846
PstI CTGCAG 1 cut(s) 478
PstNI CAGNNNCTG 1 cut(s) 1213
PsuI RGATCY 6 cut(s) 924, 1584, 1890, 2534, 4336, 4650
PsyI GACNNNGTC 1 cut(s) 4579
PvuII CAGCTG 1 cut(s) 2683
RruI TCGCGA 1 cut(s) 255
RseI CAYNNNNRTG 5 cut(s) 1498, 1681, 2246, 3037, 4035
SacI GAGCTC 1 cut(s) 3281
SalI GTCGAC 2 cut(s) 573, 1146
SapI GCTCTTC 1 cut(s) 407
SatI GCNGC 8 cut(s) 477, 836, 1122, 1994, 2681, 2684, 2862, 3776
Sau96I GGNCC 5 cut(s) 742, 1182, 3846, 4432, 4782
SchI GAGTC 5 cut(s) 580, 805, 1153, 3888, 4589
ScrFI CCNGG 4 cut(s) 1055, 1245, 2873, 3168
SduI GDGCHC 4 cut(s) 2253, 3281, 4690, 4708
SfcI CTRYAG 2 cut(s) 474, 1139
Sfr274I CTCGAG 2 cut(s) 2427, 3618
SfuI TTCGAA 1 cut(s) 3054
SinI GGWCC 5 cut(s) 742, 1182, 3846, 4432, 4782
SlaI CTCGAG 2 cut(s) 2427, 3618
SmiMI CAYNNNNRTG 5 cut(s) 1498, 1681, 2246, 3037, 4035
SmlI CTYRAG 8 cut(s) 2427, 2645, 3484, 3493, 3523, 3618, 3987, 4159
SmoI CTYRAG 8 cut(s) 2427, 2645, 3484, 3493, 3523, 3618, 3987, 4159
SpeI ACTAGT 3 cut(s) 172, 3379, 4413
SphI GCATGC 1 cut(s) 3782
SsiI CCGC 9 cut(s) 99, 417, 759, 1564, 1895, 3078, 3174, 3839, 4785
SspI AATATT 1 cut(s) 4265
SstI GAGCTC 1 cut(s) 3281
StyD4I CCNGG 4 cut(s) 1053, 1243, 2871, 3166
StyI CCWWGG 5 cut(s) 788, 2147, 2193, 3850, 4014
TaaI ACNGT 6 cut(s) 673, 1728, 2190, 2552, 2616, 4097
TaiI ACGT 8 cut(s) 945, 1106, 1561, 1709, 2507, 2590, 3578, 3998
TaqII GACCGA 2 cut(s) 1199, 1580
TatI WGTACW 7 cut(s) 1485, 2481, 2547, 3800, 3968, 4142, 4426
TfiI GAWTC 9 cut(s) 37, 226, 1762, 2015, 2344, 2563, 2608, 3259, 3498
TscAI CASTG 9 cut(s) 591, 1849, 1990, 2115, 2193, 2354, 3585, 4037, 4683
TseFI GTSAC 8 cut(s) 1464, 1500, 2184, 2446, 2690, 3576, 3942, 3991
TseI GCWGC 8 cut(s) 476, 835, 1121, 1993, 2680, 2683, 2861, 3775
Tsp45I GTSAC 8 cut(s) 1464, 1500, 2184, 2446, 2690, 3576, 3942, 3991
TspGWI ACGGA 6 cut(s) 182, 592, 755, 2062, 3459, 4739
TspRI CASTG 9 cut(s) 591, 1849, 1990, 2115, 2193, 2354, 3585, 4037, 4683
Tth111I GACNNNGTC 1 cut(s) 4579
Van91I CCANNNNNTGG 2 cut(s) 1405, 2517
Vha464I CTTAAG 2 cut(s) 3484, 4159
VneI GTGCAC 1 cut(s) 2249
VpaK11BI GGWCC 5 cut(s) 742, 1182, 3846, 4432, 4782
VspI ATTAAT 1 cut(s) 2578
XbaI TCTAGA 1 cut(s) 2998
XceI RCATGY 3 cut(s) 2245, 3782, 4447
XcmI CCANNNNNNNNNTGG 1 cut(s) 279
XhoI CTCGAG 2 cut(s) 2427, 3618
XmiI GTMKAC 4 cut(s) 574, 1138, 1147, 3312
XmnI GAANNNNTTC 7 cut(s) 329, 989, 2096, 2324, 3162, 3332, 3518
ZraI GACGTC 3 cut(s) 943, 3576, 3996
Zsp2I ATGCAT 3 cut(s) 883, 3034, 3835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.