Rorug05G0466500

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Forward (+)
64207308 .. 64211118
3811 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0466500.1

Sequence Viewer

Length: 699 bp
ATGTCAGCCCCCGGTAAAGATCTGAACCCGAACCCGAATCCGACTCCGAGTCCACCTCATCAACACCACCTGAATCCTCCACCTGACGGAACCCTCGACGGCGCCGATCCCCTCCTCCAATCGGGGGCCTTCATCGACCCCACCACCACCCCCACCTCAGATATGGAAGAAACCGGGAAGGCTCAACCGAACGGTGTGGACTCAGTGACGCCGGGCACGAGTAATGTCACTGCAGACGGGTCGGCGGGCCGGGCTAAGGCGAAGGGGTCGGATCCTCAGGCTATGGATTGGTTGCCGGCCGGTTGGAGAGTGGAGTATAAAGTGCGGAGCTCCGGTGCTACAGCTGGAAGTACAGATAGGTATTACCATGATCCAGTATCAGGTCGTCGATTTCGGTCAAAGAAAGAAGTCCTTCACTTTCTGGAAACAGGAACGCTCAAGAAGAACGCTAGTTCTGACAAAACGTCCGTGGAAGGTTCTGCGAGCAAAAAGCAAAGGAAGTCTAATACAAAGCCCAGACCTGCTGTGAACTTTGATTTTTTTGATGTGCCTGCGAAGGTGGAATGGGTTCTCACAGACTCCTCTCAGTGGACCTGGACACCCTTTATCGGTGACCAAAAGGTGCCCGAGTCCACTGCCAAAGAATGGGCTACTGCATTCACAGTTTTCACATCCAGCAATAGTGGCCACACTCAATGA

Protein Analysis

232

Amino Acids

25.0

Weight (kDa)

7.03

Isoelectric Point (pI)

32.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBD PF01429 96 - 146 1.4e-11 Methyl-CpG binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 529
AccB1I GGYRCC 2 cut(s) 101, 622
AccB7I CCANNNNNTGG 1 cut(s) 645
AciI CCGC 2 cut(s) 245, 325
AclWI GGATC 4 cut(s) 101, 266, 279, 365
AcoI YGGCCR 2 cut(s) 297, 685
AcyI GRCGYC 2 cut(s) 102, 209
AfaI GTAC 1 cut(s) 352
AfiI CCNNNNNNNGG 8 cut(s) 86, 121, 124, 256, 380, 588, 608, 645
AhdI GACNNNNNGTC 2 cut(s) 48, 463
AjnI CCWGG 1 cut(s) 593
AluBI AGCT 2 cut(s) 330, 344
AluI AGCT 2 cut(s) 330, 344
Alw21I GWGCWC 1 cut(s) 332
AlwI GGATC 4 cut(s) 101, 266, 279, 365
Ama87I CYCGRG 1 cut(s) 626
AoxI GGCC 4 cut(s) 126, 247, 297, 685
Asp700I GAANNNNTTC 2 cut(s) 411, 567
AspLEI GCGC 1 cut(s) 104
AspS9I GGNCC 3 cut(s) 126, 247, 591
AsuC2I CCSGG 4 cut(s) 12, 175, 213, 251
AsuHPI GGTGA 1 cut(s) 623
AvaI CYCGRG 1 cut(s) 626
AvaII GGWCC 1 cut(s) 591
AxyI CCTNAGG 1 cut(s) 276
BaeGI GKGCMC 2 cut(s) 218, 627
BalI TGGCCA 1 cut(s) 687
BamHI GGATCC 1 cut(s) 271
BanI GGYRCC 2 cut(s) 101, 622
BanII GRGCYC 1 cut(s) 332
BauI CACGAG 1 cut(s) 217
Bbv12I GWGCWC 1 cut(s) 332
BceAI ACGGC 1 cut(s) 115
BcgI CGANNNNNNTGC 4 cut(s) 222, 256, 617, 651
BciT130I CCWGG 1 cut(s) 595
BcnI CCSGG 4 cut(s) 12, 175, 213, 251
BfaI CTAG 1 cut(s) 450
BfmI CTRYAG 2 cut(s) 231, 339
BfoI RGCGCY 1 cut(s) 105
BfuAI ACCTGC 1 cut(s) 529
BglII AGATCT 1 cut(s) 19
Bme1390I CCNGG 5 cut(s) 12, 175, 213, 251, 595
Bme18I GGWCC 1 cut(s) 591
BmeRI GACNNNNNGTC 2 cut(s) 48, 463
BmeT110I CYCGRG 1 cut(s) 626
BmgT120I GGNCC 3 cut(s) 126, 247, 591
BmiI GGNNCC 5 cut(s) 91, 103, 127, 273, 624
BmrFI CCNGG 5 cut(s) 12, 175, 213, 251, 595
BplI GAGNNNNNCTC 2 cut(s) 40, 72
Bpu10I CCTNAGC 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 422
BpuMI CCSGG 4 cut(s) 12, 175, 213, 251
BsaHI GRCGYC 2 cut(s) 102, 209
BsaJI CCNNGG 2 cut(s) 10, 468
BsaWI WCCGGW 1 cut(s) 332
BsaXI ACNNNNNCTCC 2 cut(s) 319, 349
Bsc4I CCNNNNNNNGG 8 cut(s) 86, 121, 124, 256, 380, 588, 608, 645
Bse118I RCCGGY 2 cut(s) 295, 299
Bse1I ACTGG 1 cut(s) 374
Bse21I CCTNAGG 1 cut(s) 276
BseBI CCWGG 1 cut(s) 595
BseDI CCNNGG 2 cut(s) 10, 468
BseGI GGATG 1 cut(s) 671
BseLI CCNNNNNNNGG 8 cut(s) 86, 121, 124, 256, 380, 588, 608, 645
BseMII CTCAG 4 cut(s) 171, 216, 290, 599
BseNI ACTGG 1 cut(s) 374
BseRI GAGGAG 2 cut(s) 104, 571
BseSI GKGCMC 2 cut(s) 218, 627
BseX3I CGGCCG 1 cut(s) 297
Bsh1285I CGRYCG 1 cut(s) 300
BshFI GGCC 4 cut(s) 128, 249, 299, 687
BshNI GGYRCC 2 cut(s) 101, 622
BsiEI CGRYCG 1 cut(s) 300
BsiHKAI GWGCWC 1 cut(s) 332
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 7 cut(s) 12, 174, 212, 250, 296, 300, 333
BslI CCNNNNNNNGG 8 cut(s) 86, 121, 124, 256, 380, 588, 608, 645
BsmI GAATGC 1 cut(s) 656
BsnI GGCC 4 cut(s) 128, 249, 299, 687
BsoBI CYCGRG 1 cut(s) 626
Bsp1286I GDGCHC 3 cut(s) 218, 332, 627
Bsp143I GATC 4 cut(s) 19, 106, 271, 370
BspACI CCGC 2 cut(s) 245, 325
BspANI GGCC 4 cut(s) 128, 249, 299, 687
BspCNI CTCAG 4 cut(s) 170, 215, 289, 598
BspLI GGNNCC 5 cut(s) 91, 103, 127, 273, 624
BspMAI CTGCAG 1 cut(s) 235
BspMI ACCTGC 1 cut(s) 529
BspPI GGATC 4 cut(s) 101, 266, 279, 365
BspT107I GGYRCC 2 cut(s) 101, 622
BsrFI RCCGGY 2 cut(s) 295, 299
BsrI ACTGG 1 cut(s) 374
BssAI RCCGGY 2 cut(s) 295, 299
BssECI CCNNGG 2 cut(s) 10, 468
BssMI GATC 4 cut(s) 19, 106, 271, 370
BssNI GRCGYC 2 cut(s) 102, 209
BssSI CACGAG 1 cut(s) 217
Bst2BI CACGAG 1 cut(s) 217
Bst2UI CCWGG 1 cut(s) 595
Bst4CI ACNGT 2 cut(s) 194, 664
BstACI GRCGYC 2 cut(s) 102, 209
BstC8I GCNNGC 4 cut(s) 247, 297, 484, 552
BstDEI CTNAG 5 cut(s) 157, 202, 255, 276, 585
BstDSI CCRYGG 1 cut(s) 468
BstEII GGTNACC 1 cut(s) 611
BstF5I GGATG 1 cut(s) 671
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 1 cut(s) 104
BstKTI GATC 4 cut(s) 22, 109, 274, 373
BstMBI GATC 4 cut(s) 19, 106, 271, 370
BstMCI CGRYCG 1 cut(s) 300
BstMWI GCNNNNNNNGC 2 cut(s) 251, 684
BstNI CCWGG 1 cut(s) 595
BstPI GGTNACC 1 cut(s) 611
BstSCI CCNGG 5 cut(s) 10, 173, 211, 249, 593
BstSFI CTRYAG 2 cut(s) 231, 339
BstSLI GKGCMC 2 cut(s) 218, 627
BstX2I RGATCY 2 cut(s) 19, 271
BstYI RGATCY 2 cut(s) 19, 271
BstZI CGGCCG 1 cut(s) 297
Bsu36I CCTNAGG 1 cut(s) 276
BsuRI GGCC 4 cut(s) 128, 249, 299, 687
BtgI CCRYGG 1 cut(s) 468
BtsCI GGATG 1 cut(s) 671
BtsI GCAGTG 2 cut(s) 228, 633
BtsIMutI CAGTG 4 cut(s) 210, 228, 593, 633
BveI ACCTGC 1 cut(s) 529
Cac8I GCNNGC 4 cut(s) 247, 297, 484, 552
CfoI GCGC 1 cut(s) 104
Cfr10I RCCGGY 2 cut(s) 295, 299
Cfr13I GGNCC 3 cut(s) 126, 247, 591
CseI GACGC 1 cut(s) 217
Csp6I GTAC 1 cut(s) 351
CviAII CATG 1 cut(s) 368
CviQI GTAC 1 cut(s) 351
DdeI CTNAG 5 cut(s) 157, 202, 255, 276, 585
DinI GGCGCC 1 cut(s) 103
DpnI GATC 4 cut(s) 21, 108, 273, 372
DpnII GATC 4 cut(s) 19, 106, 271, 370
DriI GACNNNNNGTC 2 cut(s) 48, 463
EaeI YGGCCR 2 cut(s) 297, 685
EagI CGGCCG 1 cut(s) 297
Eam1105I GACNNNNNGTC 2 cut(s) 48, 463
Ecl136II GAGCTC 1 cut(s) 330
EclXI CGGCCG 1 cut(s) 297
Eco24I GRGCYC 1 cut(s) 332
Eco47I GGWCC 1 cut(s) 591
Eco52I CGGCCG 1 cut(s) 297
Eco53kI GAGCTC 1 cut(s) 330
Eco81I CCTNAGG 1 cut(s) 276
Eco88I CYCGRG 1 cut(s) 626
Eco91I GGTNACC 1 cut(s) 611
EcoICRI GAGCTC 1 cut(s) 330
EcoO109I RGGNCCY 1 cut(s) 126
EcoO65I GGTNACC 1 cut(s) 611
EcoRII CCWGG 1 cut(s) 593
EcoT38I GRGCYC 1 cut(s) 332
EgeI GGCGCC 1 cut(s) 103
EheI GGCGCC 1 cut(s) 103
FaeI CATG 1 cut(s) 371
FaiI YATR 4 cut(s) 164, 284, 318, 369
FalI AAGNNNNNCTT 2 cut(s) 396, 428
FatI CATG 1 cut(s) 367
FauI CCCGC 1 cut(s) 238
FokI GGATG 1 cut(s) 658
FriOI GRGCYC 1 cut(s) 332
FspBI CTAG 1 cut(s) 450
GlaI GCGC 1 cut(s) 103
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 4 cut(s) 128, 249, 299, 687
HapII CCGG 7 cut(s) 12, 174, 212, 250, 296, 300, 333
HgaI GACGC 1 cut(s) 217
HhaI GCGC 1 cut(s) 104
Hin1I GRCGYC 2 cut(s) 102, 209
Hin1II CATG 1 cut(s) 371
Hin6I GCGC 1 cut(s) 102
HinP1I GCGC 1 cut(s) 102
HinfI GANTC 7 cut(s) 37, 43, 49, 73, 200, 578, 629
HpaII CCGG 7 cut(s) 12, 174, 212, 250, 296, 300, 333
HphI GGTGA 1 cut(s) 623
Hpy166II GTNNAC 5 cut(s) 53, 199, 529, 591, 633
Hpy188I TCNGA 6 cut(s) 24, 42, 48, 160, 271, 457
Hpy188III TCNNGA 2 cut(s) 422, 439
Hpy8I GTNNAC 5 cut(s) 53, 199, 529, 591, 633
Hpy99I CGWCG 2 cut(s) 101, 390
HpyAV CCTTC 6 cut(s) 139, 172, 256, 422, 467, 550
HpyCH4III ACNGT 2 cut(s) 194, 664
HpyCH4IV ACGT 1 cut(s) 464
HpyCH4V TGCA 2 cut(s) 233, 656
HpyF10VI GCNNNNNNNGC 2 cut(s) 251, 684
HpyF3I CTNAG 5 cut(s) 157, 202, 255, 276, 585
HpySE526I ACGT 1 cut(s) 464
Hsp92I GRCGYC 2 cut(s) 102, 209
Hsp92II CATG 1 cut(s) 371
HspAI GCGC 1 cut(s) 102
KasI GGCGCC 1 cut(s) 101
KroI GCCGGC 1 cut(s) 295
KroNI GCCGGC 1 cut(s) 297
Kzo9I GATC 4 cut(s) 19, 106, 271, 370
LmnI GCTCC 2 cut(s) 327, 335
MaeI CTAG 1 cut(s) 450
MaeII ACGT 1 cut(s) 464
MaeIII GTNAC 3 cut(s) 205, 226, 611
MalI GATC 4 cut(s) 21, 108, 273, 372
MboI GATC 4 cut(s) 19, 106, 271, 370
MboII GAAGA 2 cut(s) 179, 454
MflI RGATCY 2 cut(s) 19, 271
MhlI GDGCHC 3 cut(s) 218, 332, 627
MlsI TGGCCA 1 cut(s) 687
MluNI TGGCCA 1 cut(s) 687
Mly113I GGCGCC 1 cut(s) 102
MlyI GAGTC 5 cut(s) 37, 58, 194, 572, 638
MmeI TCCRAC 3 cut(s) 65, 249, 284
MnlI CCTC 8 cut(s) 66, 87, 104, 122, 125, 166, 285, 592
Mox20I TGGCCA 1 cut(s) 687
MroNI GCCGGC 1 cut(s) 295
MroXI GAANNNNTTC 2 cut(s) 411, 567
MscI TGGCCA 1 cut(s) 687
Msp20I TGGCCA 1 cut(s) 687
MspA1I CMGCKG 1 cut(s) 344
MspI CCGG 7 cut(s) 12, 174, 212, 250, 296, 300, 333
MspR9I CCNGG 5 cut(s) 12, 175, 213, 251, 595
Mva1269I GAATGC 1 cut(s) 656
MvaI CCWGG 1 cut(s) 595
MwoI GCNNNNNNNGC 2 cut(s) 251, 684
NaeI GCCGGC 1 cut(s) 297
NarI GGCGCC 1 cut(s) 102
NciI CCSGG 4 cut(s) 12, 175, 213, 251
NdeII GATC 4 cut(s) 19, 106, 271, 370
NgoMIV GCCGGC 1 cut(s) 295
NlaIII CATG 1 cut(s) 371
NlaIV GGNNCC 5 cut(s) 91, 103, 127, 273, 624
NmuCI GTSAC 3 cut(s) 205, 226, 611
PcsI WCGNNNNNNNCGW 3 cut(s) 93, 102, 215
PctI GAATGC 1 cut(s) 656
PdiI GCCGGC 1 cut(s) 297
PdmI GAANNNNTTC 2 cut(s) 411, 567
PfeI GAWTC 2 cut(s) 37, 73
PflMI CCANNNNNTGG 1 cut(s) 645
PleI GAGTC 5 cut(s) 37, 57, 194, 572, 637
PluTI GGCGCC 1 cut(s) 105
PpsI GAGTC 5 cut(s) 37, 57, 194, 572, 637
Psp124BI GAGCTC 1 cut(s) 332
Psp6I CCWGG 1 cut(s) 593
PspEI GGTNACC 1 cut(s) 611
PspGI CCWGG 1 cut(s) 593
PspN4I GGNNCC 5 cut(s) 91, 103, 127, 273, 624
PspPI GGNCC 3 cut(s) 126, 247, 591
PstI CTGCAG 1 cut(s) 235
PsuI RGATCY 2 cut(s) 19, 271
PvuII CAGCTG 1 cut(s) 344
RsaI GTAC 1 cut(s) 352
RsaNI GTAC 1 cut(s) 351
SacI GAGCTC 1 cut(s) 332
Sau3AI GATC 4 cut(s) 19, 106, 271, 370
Sau96I GGNCC 3 cut(s) 126, 247, 591
SchI GAGTC 5 cut(s) 37, 58, 194, 572, 638
ScrFI CCNGG 5 cut(s) 12, 175, 213, 251, 595
SduI GDGCHC 3 cut(s) 218, 332, 627
SfcI CTRYAG 2 cut(s) 231, 339
SfoI GGCGCC 1 cut(s) 103
SinI GGWCC 1 cut(s) 591
SmlI CTYRAG 1 cut(s) 437
SmoI CTYRAG 1 cut(s) 437
SsiI CCGC 2 cut(s) 245, 325
SspDI GGCGCC 1 cut(s) 101
SspMI CTAG 1 cut(s) 450
SstI GAGCTC 1 cut(s) 332
StyD4I CCNGG 5 cut(s) 10, 173, 211, 249, 593
TaaI ACNGT 2 cut(s) 194, 664
TaiI ACGT 1 cut(s) 467
TaqI TCGA 3 cut(s) 96, 135, 388
TaqII GACCGA 1 cut(s) 384
TatI WGTACW 1 cut(s) 350
TfiI GAWTC 2 cut(s) 37, 73
TscAI CASTG 4 cut(s) 210, 235, 593, 640
TseFI GTSAC 3 cut(s) 205, 226, 611
Tsp45I GTSAC 3 cut(s) 205, 226, 611
TspDTI ATGAA 1 cut(s) 121
TspGWI ACGGA 2 cut(s) 102, 457
TspRI CASTG 4 cut(s) 210, 235, 593, 640
Van91I CCANNNNNTGG 1 cut(s) 645
VpaK11BI GGWCC 1 cut(s) 591
XcmI CCANNNNNNNNNTGG 1 cut(s) 160
XmnI GAANNNNTTC 2 cut(s) 411, 567
XspI CTAG 1 cut(s) 450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.