RLG00000036848

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000085
Physical Location & Seq
Reverse (-)
85758376 .. 85762675
4300 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036848

Sequence Viewer

Length: 1929 bp
ATGGGGGATTTTGAAGCATTTGAAGCAACAAAGCAAGCCACTATGGAAATTGAGTCTACAATGCCAAAGTCGACCAAAGATTTTGAAACAGTTGAAGCAACAACACAAGCCACCAATGGAAACACTGAACCAGCTCAGTGGAAGCATGATGTGTTTTTGAGTTTTAGGGGTGAAGACACTCGCAAGGGTTTTCTATCCCATTTATACCATGAATTGCAAAACACGAAAGTAATTAGAACATTTAAGGATGATGAACAACTTGAGAAAGGGAAGGATATTTCTCAAAGTCTACTGACAGCAATTGAAGAATCAAGGTTTGCGATCATTGTCCTGTCGGAAAACTATGCTTCTTCTGCATGGTGTTTAGATGAACTTACGAAGATTTTTCAATGCATGGAACGCAAGGATACAATTCTGCCAATTTTTTATCATGTGGATCCTTCTGATATACGATATCAGAAGGGTCAATTTGAAGTGGCCTTTACAAAGCATGAAAGCAAGGCAAGGTATGACACAGAGAAGGTGAAGCAGTGGAGAGCTGATTTAACAAAAGTGGGAAATCTCTCTGGCTGGGATTCAAAGAACCATAAATCTGAAAGGGAACTCGTTGAAGACATTGTGAAATTTGTGCTCAAAAAAGTACTTCAAGCACCAAGGGGAGATTTTGAAGAATTTGAAGCAACAAGAGAAGCCATGGATGAGGTTAAGAAGATGCTGAAAGGTGATAAGATCACCATCATTGGGGTCTATGGAAGAGGAGGCGTTGGCAAGACAGCCATGGTGAAACATGTCAGTGCACAAGCCCAAAGAATTGGGCTTTTTGATCATGTTGTTATGGCTGTTATATCCCGAAACCCTGATTTGCAAAAAATTCAAGGCGCATTGGTAAATCAGCTGGGAGTGGAATTGGTGGAGGATGAAGAGACAGAAAGAGCCAGTAGATTGAAGGAGAGGATCATGGGAGGAAAGAGGATCCTTATTATCTTGGATGACATTTGGGAGGTAATAAATTTGTCAAGCATTGGAATTCCTAGCTATGACGAGCTTCAAAGATGCAATTCCAAGGTTCTATTCACCACAAGGATCAGGAATCTTTGTCATTCTATGGGGTGCCAAGCACATATTCCTCTCAATGTCCTATCAGAGGAAGATTCTTTGAAGTTATTCATGAAGTTGAGAAAGCCTTTTCATGAATCTACCATTTCCTATGATGAAGAGAGGAACATAGTTAGAGAATGCGCTGGTCTCCCAAATGTACTGGAAGAAGCTGCAAGGGCACTTGGACATATATACGTGGAAGAATGGAACGAAGCAGTATCAAAGGCATTTGGAGATAATGACAATGAATTGCAAAAAGCAGATCAAAAACTAAATGCATCTCAACTTGTCCACACTAAAGATGAGACAGATACATTTAAAAGAATAGAGTTAAGCTATCATACCTTGAGGTTTGATGATGCCAAGTCATTGTTCTTGCTTTGCTGCATTTTTCCAGAAGGTTATGATATCCCAGTTGAAGAATTGTTGAGGTATGGGATTGGAAAGGGTTTGCTTCAATATTCTGACACATTGCAAGAAGCTAGAGACAGAGTAAATTCTATGGTTGCATACCTTAAAGCTTCGGGGTTGCTTTTGGATGGCAAGAAGGGATGCAAAAGGATGCATTGTGACATCCGAAATGTGGCCATGTCTATTGCCTTGTCTGAAGAAGGTCATGCTTTTTTCGTAAAAGCTGGTTGTGAATTGAAGGACTGGCCAATGGATGCTCATAAAGGCTACTCAGCAATCTCACTAATGAGAAACAAACTTAGCAAGGTTCCCGAATCTTTGTTTGTAAACTCTGCTTCTGCTTCTGCTTCTGTTAAACTCAGCGATCAACAACATTTGAATTCTCTAGCGAAAAGATGGGAGGATATGTATAAGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

643

Amino Acids

73.08

Weight (kDa)

5.92

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 48 - 218 7.5e-54 TIR domain
TIR_2 PF13676 51 - 156 3.7e-16 TIR domain
NB-ARC PF00931 230 - 391 9.2e-30 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1110
AccI GTMKAC 3 cut(s) 56, 71, 289
AclWI GGATC 6 cut(s) 431, 444, 962, 967, 980, 1091
AcoI YGGCCR 2 cut(s) 1683, 1754
AcsI RAATTY 7 cut(s) 623, 671, 870, 1009, 1026, 1594, 1888
AcuI CTGAAG 1 cut(s) 1725
AfaI GTAC 2 cut(s) 642, 1257
AfiI CCNNNNNNNGG 3 cut(s) 741, 1144, 1681
AflIII ACRYGT 1 cut(s) 787
AjuI GAANNNNNNNTTGG 6 cut(s) 1055, 1087, 1107, 1139, 1454, 1486
Alw21I GWGCWC 2 cut(s) 633, 799
Alw26I GTCTC 4 cut(s) 917, 1250, 1397, 1578
Alw44I GTGCAC 1 cut(s) 795
AlwI GGATC 6 cut(s) 431, 444, 962, 967, 980, 1091
AoxI GGCC 3 cut(s) 477, 1683, 1754
ApaLI GTGCAC 1 cut(s) 795
ApeKI GCWGC 2 cut(s) 1268, 1482
ApoI RAATTY 7 cut(s) 623, 671, 870, 1009, 1026, 1594, 1888
Asp700I GAANNNNTTC 1 cut(s) 1163
AspLEI GCGC 2 cut(s) 881, 1241
AsuHPI GGTGA 6 cut(s) 182, 535, 724, 734, 793, 1066
BaeGI GKGCMC 2 cut(s) 799, 1279
BalI TGGCCA 2 cut(s) 1685, 1756
BamHI GGATCC 2 cut(s) 436, 972
BanI GGYRCC 1 cut(s) 1110
BbsI GAAGAC 2 cut(s) 180, 618
Bbv12I GWGCWC 2 cut(s) 633, 799
BbvI GCAGC 2 cut(s) 1255, 1469
BccI CCATC 3 cut(s) 743, 1631, 1899
BciVI GTATCC 1 cut(s) 400
BclI TGATCA 1 cut(s) 823
BcoDI GTCTC 4 cut(s) 917, 1250, 1397, 1578
BfaI CTAG 3 cut(s) 1032, 1581, 1895
BfuI GTATCC 1 cut(s) 400
BisI GCNGC 2 cut(s) 1269, 1483
BlsI GCNGC 2 cut(s) 1270, 1484
BmcAI AGTACT 1 cut(s) 642
BmiI GGNNCC 4 cut(s) 438, 974, 1112, 1818
BmrI ACTGGG 1 cut(s) 1505
BmsI GCATC 7 cut(s) 702, 1043, 1385, 1447, 1640, 1650, 1753
BmuI ACTGGG 1 cut(s) 1505
BpiI GAAGAC 2 cut(s) 180, 618
BpuEI CTTGAG 2 cut(s) 281, 1465
BsaAI YACGTR 1 cut(s) 1294
BsaBI GATNNNNATC 1 cut(s) 734
BsaI GGTCTC 1 cut(s) 1250
BsaJI CCNNGG 4 cut(s) 653, 693, 777, 1062
BsaXI ACNNNNNCTCC 1 cut(s) 1901
Bsc4I CCNNNNNNNGG 3 cut(s) 741, 1144, 1681
Bse1I ACTGG 4 cut(s) 936, 1263, 1511, 1757
Bse3DI GCAATG 1 cut(s) 1568
Bse8I GATNNNNATC 1 cut(s) 734
BseDI CCNNGG 4 cut(s) 653, 693, 777, 1062
BseGI GGATG 9 cut(s) 253, 703, 922, 994, 1642, 1655, 1665, 1671, 1768
BseJI GATNNNNATC 1 cut(s) 734
BseLI CCNNNNNNNGG 3 cut(s) 741, 1144, 1681
BseMI GCAATG 1 cut(s) 1568
BseMII CTCAG 3 cut(s) 149, 1794, 1882
BseNI ACTGG 4 cut(s) 936, 1263, 1511, 1757
BseRI GAGGAG 1 cut(s) 771
BseSI GKGCMC 2 cut(s) 799, 1279
BseXI GCAGC 2 cut(s) 1255, 1469
BseYI CCCAGC 2 cut(s) 570, 895
BshFI GGCC 3 cut(s) 479, 1685, 1756
BshNI GGYRCC 1 cut(s) 1110
BsiHKAI GWGCWC 2 cut(s) 633, 799
BslI CCNNNNNNNGG 3 cut(s) 741, 1144, 1681
BsmAI GTCTC 4 cut(s) 917, 1250, 1397, 1578
BsmI GAATGC 1 cut(s) 1241
BsnI GGCC 3 cut(s) 479, 1685, 1756
Bso31I GGTCTC 1 cut(s) 1250
Bsp1286I GDGCHC 3 cut(s) 633, 799, 1279
Bsp143I GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
Bsp19I CCATGG 2 cut(s) 693, 777
BspANI GGCC 3 cut(s) 479, 1685, 1756
BspCNI CTCAG 3 cut(s) 148, 1793, 1881
BspHI TCATGA 2 cut(s) 1167, 1189
BspLI GGNNCC 4 cut(s) 438, 974, 1112, 1818
BspPI GGATC 6 cut(s) 431, 444, 962, 967, 980, 1091
BspT107I GGYRCC 1 cut(s) 1110
BspTNI GGTCTC 1 cut(s) 1250
BsrDI GCAATG 1 cut(s) 1568
BsrI ACTGG 4 cut(s) 936, 1263, 1511, 1757
BssECI CCNNGG 4 cut(s) 653, 693, 777, 1062
BssMI GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
BssT1I CCWWGG 4 cut(s) 653, 693, 777, 1062
Bst4CI ACNGT 1 cut(s) 91
Bst6I CTCTTC 3 cut(s) 748, 915, 1209
BstBAI YACGTR 1 cut(s) 1294
BstC8I GCNNGC 1 cut(s) 36
BstDEI CTNAG 4 cut(s) 135, 1780, 1808, 1868
BstDSI CCRYGG 2 cut(s) 693, 777
BstENI CCTNNNNNAGG 1 cut(s) 1142
BstF5I GGATG 9 cut(s) 253, 703, 922, 994, 1642, 1655, 1665, 1671, 1768
BstHHI GCGC 2 cut(s) 881, 1241
BstKTI GATC 9 cut(s) 324, 439, 732, 826, 957, 975, 1086, 1363, 1876
BstMAI GTCTC 4 cut(s) 917, 1250, 1397, 1578
BstMBI GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
BstMWI GCNNNNNNNGC 4 cut(s) 23, 353, 399, 1274
BstNSI RCATGY 1 cut(s) 791
BstSLI GKGCMC 2 cut(s) 799, 1279
BstV1I GCAGC 2 cut(s) 1255, 1469
BstV2I GAAGAC 2 cut(s) 180, 618
BstX2I RGATCY 2 cut(s) 436, 972
BstXI CCANNNNNNTGG 2 cut(s) 138, 812
BstYI RGATCY 2 cut(s) 436, 972
BsuI GTATCC 1 cut(s) 400
BsuRI GGCC 3 cut(s) 479, 1685, 1756
BtgI CCRYGG 2 cut(s) 693, 777
BtsCI GGATG 9 cut(s) 253, 703, 922, 994, 1642, 1655, 1665, 1671, 1768
BtsI GCAGTG 1 cut(s) 536
BtsIMutI CAGTG 4 cut(s) 123, 143, 536, 799
Cac8I GCNNGC 1 cut(s) 36
CciI TCATGA 2 cut(s) 1167, 1189
CfoI GCGC 2 cut(s) 881, 1241
Csp6I GTAC 2 cut(s) 641, 1256
CviQI GTAC 2 cut(s) 641, 1256
DdeI CTNAG 4 cut(s) 135, 1780, 1808, 1868
DpnI GATC 9 cut(s) 323, 438, 731, 825, 956, 974, 1085, 1362, 1875
DpnII GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
DraI TTTAAA 1 cut(s) 1417
EaeI YGGCCR 2 cut(s) 1683, 1754
Eam1104I CTCTTC 3 cut(s) 748, 915, 1209
EarI CTCTTC 3 cut(s) 748, 915, 1209
Eco130I CCWWGG 4 cut(s) 653, 693, 777, 1062
Eco31I GGTCTC 1 cut(s) 1250
Eco32I GATATC 2 cut(s) 455, 1507
Eco57I CTGAAG 1 cut(s) 1725
EcoNI CCTNNNNNAGG 1 cut(s) 1142
EcoRI GAATTC 2 cut(s) 1026, 1888
EcoRV GATATC 2 cut(s) 455, 1507
EcoT14I CCWWGG 4 cut(s) 653, 693, 777, 1062
EcoT22I ATGCAT 3 cut(s) 395, 1378, 1665
ErhI CCWWGG 4 cut(s) 653, 693, 777, 1062
FbaI TGATCA 1 cut(s) 823
FblI GTMKAC 3 cut(s) 56, 71, 289
Fnu4HI GCNGC 2 cut(s) 1269, 1483
FokI GGATG 9 cut(s) 260, 710, 929, 1001, 1649, 1658, 1662, 1672, 1775
Fsp4HI GCNGC 2 cut(s) 1269, 1483
FspBI CTAG 3 cut(s) 1032, 1581, 1895
GlaI GCGC 2 cut(s) 880, 1240
GluI GCNGC 2 cut(s) 1269, 1483
GsaI CCCAGC 2 cut(s) 574, 899
HaeIII GGCC 3 cut(s) 479, 1685, 1756
HhaI GCGC 2 cut(s) 881, 1241
Hin6I GCGC 2 cut(s) 879, 1239
HinP1I GCGC 2 cut(s) 879, 1239
HincII GTYRAC 1 cut(s) 72
HindII GTYRAC 1 cut(s) 72
HindIII AAGCTT 2 cut(s) 1617, 1922
HinfI GANTC 7 cut(s) 53, 308, 575, 1090, 1151, 1193, 1823
HphI GGTGA 6 cut(s) 182, 535, 724, 734, 793, 1066
Hpy166II GTNNAC 6 cut(s) 57, 72, 290, 797, 1390, 1837
Hpy188I TCNGA 8 cut(s) 337, 445, 459, 595, 1144, 1564, 1676, 1705
Hpy188III TCNNGA 6 cut(s) 849, 1087, 1168, 1190, 1493, 1820
Hpy8I GTNNAC 6 cut(s) 57, 72, 290, 797, 1390, 1837
HpyAV CCTTC 9 cut(s) 265, 450, 454, 514, 940, 1490, 1639, 1703, 1741
HpyCH4III ACNGT 1 cut(s) 91
HpyCH4IV ACGT 1 cut(s) 1293
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 353, 399, 1274
HpyF3I CTNAG 4 cut(s) 135, 1780, 1808, 1868
HpySE526I ACGT 1 cut(s) 1293
HspAI GCGC 2 cut(s) 879, 1239
Ksp22I TGATCA 1 cut(s) 823
Kzo9I GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
Lsp1109I GCAGC 2 cut(s) 1255, 1469
LweI GCATC 7 cut(s) 702, 1043, 1385, 1447, 1640, 1650, 1753
MaeI CTAG 3 cut(s) 1032, 1581, 1895
MaeII ACGT 1 cut(s) 1293
MaeIII GTNAC 1 cut(s) 1667
MalI GATC 9 cut(s) 323, 438, 731, 825, 956, 974, 1085, 1362, 1875
MboI GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
MfeI CAATTG 1 cut(s) 300
MflI RGATCY 2 cut(s) 436, 972
MhlI GDGCHC 3 cut(s) 633, 799, 1279
MlsI TGGCCA 2 cut(s) 1685, 1756
MluNI TGGCCA 2 cut(s) 1685, 1756
MlyI GAGTC 1 cut(s) 62
MmeI TCCRAC 1 cut(s) 315
Mox20I TGGCCA 2 cut(s) 1685, 1756
Mph1103I ATGCAT 3 cut(s) 395, 1378, 1665
MroXI GAANNNNTTC 1 cut(s) 1163
MscI TGGCCA 2 cut(s) 1685, 1756
MseI TTAA 8 cut(s) 243, 545, 705, 1416, 1430, 1614, 1863, 1927
MslI CAYNNNNRTG 1 cut(s) 792
Msp20I TGGCCA 2 cut(s) 1685, 1756
MspA1I CMGCKG 1 cut(s) 895
MunI CAATTG 1 cut(s) 300
Mva1269I GAATGC 1 cut(s) 1241
MwoI GCNNNNNNNGC 4 cut(s) 23, 353, 399, 1274
NcoI CCATGG 2 cut(s) 693, 777
NdeII GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
NlaIV GGNNCC 4 cut(s) 438, 974, 1112, 1818
NmuCI GTSAC 1 cut(s) 1667
NsiI ATGCAT 3 cut(s) 395, 1378, 1665
NspI RCATGY 1 cut(s) 791
PagI TCATGA 2 cut(s) 1167, 1189
PciI ACATGT 1 cut(s) 787
PctI GAATGC 1 cut(s) 1241
PdmI GAANNNNTTC 1 cut(s) 1163
PfeI GAWTC 6 cut(s) 308, 575, 1090, 1151, 1193, 1823
PkrI GCNGC 2 cut(s) 1270, 1484
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
Ppu21I YACGTR 1 cut(s) 1294
PscI ACATGT 1 cut(s) 787
PspFI CCCAGC 2 cut(s) 570, 895
PspN4I GGNNCC 4 cut(s) 438, 974, 1112, 1818
PsuI RGATCY 2 cut(s) 436, 972
PvuII CAGCTG 1 cut(s) 895
RsaI GTAC 2 cut(s) 642, 1257
RsaNI GTAC 2 cut(s) 641, 1256
RseI CAYNNNNRTG 1 cut(s) 792
SalI GTCGAC 1 cut(s) 70
SaqAI TTAA 8 cut(s) 243, 545, 705, 1416, 1430, 1614, 1863, 1927
SatI GCNGC 2 cut(s) 1269, 1483
Sau3AI GATC 9 cut(s) 321, 436, 729, 823, 954, 972, 1083, 1360, 1873
ScaI AGTACT 1 cut(s) 642
SchI GAGTC 1 cut(s) 62
SduI GDGCHC 3 cut(s) 633, 799, 1279
SfaNI GCATC 7 cut(s) 702, 1043, 1385, 1447, 1640, 1650, 1753
SmiMI CAYNNNNRTG 1 cut(s) 792
SmlI CTYRAG 2 cut(s) 260, 1444
SmoI CTYRAG 2 cut(s) 260, 1444
SspI AATATT 1 cut(s) 1559
SspMI CTAG 3 cut(s) 1032, 1581, 1895
StyI CCWWGG 4 cut(s) 653, 693, 777, 1062
TaaI ACNGT 1 cut(s) 91
TaiI ACGT 1 cut(s) 1296
TaqI TCGA 1 cut(s) 71
TatI WGTACW 2 cut(s) 640, 1255
TfiI GAWTC 6 cut(s) 308, 575, 1090, 1151, 1193, 1823
Tru1I TTAA 8 cut(s) 243, 545, 705, 1416, 1430, 1614, 1863, 1927
Tru9I TTAA 8 cut(s) 243, 545, 705, 1416, 1430, 1614, 1863, 1927
TscAI CASTG 4 cut(s) 130, 143, 536, 799
TseFI GTSAC 1 cut(s) 1667
TseI GCWGC 2 cut(s) 1268, 1482
Tsp45I GTSAC 1 cut(s) 1667
TspRI CASTG 4 cut(s) 130, 143, 536, 799
VneI GTGCAC 1 cut(s) 795
XagI CCTNNNNNAGG 1 cut(s) 1142
XapI RAATTY 7 cut(s) 623, 671, 870, 1009, 1026, 1594, 1888
XceI RCATGY 1 cut(s) 791
XmiI GTMKAC 3 cut(s) 56, 71, 289
XmnI GAANNNNTTC 1 cut(s) 1163
XspI CTAG 3 cut(s) 1032, 1581, 1895
ZrmI AGTACT 1 cut(s) 642
Zsp2I ATGCAT 3 cut(s) 395, 1378, 1665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.