pycom11g01570

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000085
Physical Location & Seq
Reverse (-)
1377322 .. 1380678
3357 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g01570.2

Sequence Viewer

Length: 3138 bp
ATGGAAATTGTTAGTTTCGTACTAGAAGTTGGTAAGTTGTTATGGACTCCAGTGAAGCGTAATGTGGATTACTTGGTGCATTACAAGAGCCACATGCAGTCTCTTGAAGTTCTAGTCGAAAAGCTTGAGGCCATGCAGAATGATTACCAGCGAGAAGTGGATGCGGTGGTAATGAATGGAGACGAAGTTAAGTCCGTGGTTCAAAAATGGCTCAAGGATGCTGAGAAGGCCATAATTGATGCGAAAAGACTGAATAATGAAGCCGGAGAAGACAAAACATGCCTCGGAGGCTGCTGTCCGAATTTGAAATGGCGTTACAGTTTAAGCAAGAGAGCCGTTAAGGAGGCAGAAGAAATGAACAAGCTTAAAGAAGAGAAAAGGTTTGAAACAGTTTCGCTTCAAGTTCACCGACCCGTTGAGTTTGAGCAAGCCATGGATGGGGTCATGAAGGCGCTGAAAGACGATAACATCACTGTCATCGGGGTTCATGGAATGGGAGGCATAGGCAAGACAACCATGGTGAAACATGTTGGTGTGCAAGCACGCAGAGACAAGCTCTTTGATCATGTGATTATCGCTGTCATTTCCCAAAACCCGAACCTGCTCAAGATTCAACAACAGCTTGCAGAAATGCTGGCCTTGAATTTGAATGAGCAGACAGAAATAGGCAGAGCAGCTAGATTGAAGGAGAGAATAATGAGAGGAAAAAATATCCTTATAATTTTAGACGACATTTGGAGGACAATAGATTTGTCTCACATATCGATCCCCGATCACTACGAGCTCCAAAACTGCAATTCCAAAGTTCTACTCACCACAAGGATATCGAATGTATGTCATGCCATGAAGTGCCAAGAAAAGATTCGCCTCAATATTCTATCAGAAGAAGATTCTTGGGCCTTGTTTGTGAAAAACGCAAACAGGTCTTTGGAATCAACCAATTTCTATGACATAGCGAGGAAGGTAGCTGGAGAATGTGGTGGTCTCCCAATTGCTTTGATTACAGTTGCAAGAGCACTCGGAGATAAGGACTTGGAAGAATGGAGAGAAGCAGCTCGACGACTAGAGATGTCCCAAACTACCAACCTGGATGACGAGGGGGATGTGTTCAGATGTATAAAGCTGAGCTACGATTACTTGAATGGCAATGACGCCAAGTCATTTTTCTTACTTTGCTGCTTATTCCCGGAGGACTCTGATATCCAAATCGAAGACTTGCTGAAGTATGGTATCGGGAAAGGATTGTTTCGAGATGCCAATTCAATGCAAGAAGCCAGAAGCACAGCACATTTGGTGGCCAAGTACCTTAAAGCTTGTAGCTTGGTTTTGGATGGTCTACAAGACGGATGTGTAAGAATGCATGATGTGATTCGGGACATGGCAATACGAATTGCTTCATCTGGGGATGGCAAAGGATTCTTCGTAAAAGCTGGCTGCCACTTAAAGGATTGGCCAACAAATTCACTCGAAGACTACTCCGCAATCTCCCTAATGGGGAATGAAATCTGCAATCTTCCTGACGAGTTGGTATGTCCAAAACTCCAGATTTTATTACTACAGTCAAATTTTGAAGTAGAGGAGATCCCAGAAGATTTTTTCCAAGGCCCAAATGCATTAAGGGTATTCGACATAAGTAGTACCCAAATTTCTTCATTACCTTCATCATTTAATCTCTTAACCAAGCTCCAAACGCTGCATCTAGATCGTTGTCAGTCAATAACGGATGTATCAATTCTTGGAGAATTGAAAAAACTGGAGGTTCTTAGTATGAGAGAATCTGTTATTGAGGAATTGCCCGAAGAAATTGGACATTTGACCAATTTAAGGATGATCGATCTCACTATGAGTACCTCCATTGCAACAATTCCATCCAATGTGATATCGCGGTTGTCCAAATTAGAAGAACTATACATGCAACAGAGTTTCGCTGACTGGGGCAAGAAAGTTGAAGGAGAAGATGCCAAAATTAATGCTAGTTTTGATGAGCTAATTAGCTTGTCTTACTTAAACATTTTGAAGGTTGACATTTCTGATGCAGAATGCCTTCCGAAAACTGTAGGGTTCCGTCGAAATTGGGTAAATTTTGATATATGTATCTGTGGAAACCAATTTTATCGGTCCATGAATGTGCAATTATCAAAGAATACTATTACTCCATTTTCAAGAGCCCTGCTTCTGGACACAACAATCAATATGCTGCCGGATTGGTTTAACAGCACAGTGACGGAGAGAGTGGAGAAAATAATCTACATGGAGCCTAGAAGTTTAACTGACATTCTTGTGGAGTATGATCGTTGGAAGATACATGGACTCAAGTTTTTGCATATCCAAGAGTGCCGTCAGATGGTAACTTTGATGAACACAGTAACTAGGGTTCCAAATAAGCCTGTGCTCGAGAGCTTGGAAGAGTTGCATGTCTTCTTATGGGACTGCTTGCAACAGTTATGTGTTGGTGAATTACCGCAAGGGTGTCTTGGAAATCTCAAGATCGATCTTTATCGATCAGCATTGGAGGTGGAGCAGTGTGATGGTGTGGCTGATGCACTTGTTCCATCTAATCTGTTGCGGAGACTACAAAATCTTGAAGTACTTCTTGTAGGTGGAGCTGATATGGTTTATATATTCAGATCTCAAGGGCTTGAACAAAGAGAAACGGTCTTGACAAAATTGAGAGAGATGAAACTGGAGAATCTACCGGAACTGACAAACATATGGAACGGTCCTGCTCAGCCTGCAATGTTTCATAATCTTAAAACTCTGGCAATTTCCAAGTGCAAGAAACTGAAAACTCTCTTCACATTCGACATAGCTCAATGTCTGCTGCAATTGGAAGAGCTTTGGGTGGAGGAGTGCCATAGCTTGGACAAACTTTTCGGCCGAAGCGAGGGATTAATAGAGCAGGATTCCGAGATCATTATTCCACGACTGAAGAACTTAGCATTGCAAAGTCTTCCAATGCTGACAAGCTTTCTCGCTGGACGGGCTAGACTTTTGTGCCCTTCATTGGAATACTTGCATGTGCTGGACTGCCCCCAGTTTTTAACCTCTACTTCTGACTTCCGCAGCCAGATGCAAGTCCAACTAAACAATGAGCAACATTTCCTCCTCCTAAGGAAAAGGTTGTGGGAGCAGAGGTAA

Protein Analysis

1046

Amino Acids

119.15

Weight (kDa)

5.52

Isoelectric Point (pI)

47.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 719
Acc36I ACCTGC 1 cut(s) 609
AccB7I CCANNNNNTGG 1 cut(s) 2860
AccI GTMKAC 1 cut(s) 1336
AccII CGCG 1 cut(s) 1885
AciI CCGC 6 cut(s) 164, 1479, 1885, 2462, 2566, 3061
AclWI GGATC 2 cut(s) 760, 1576
AcoI YGGCCR 3 cut(s) 1296, 1451, 2875
AcsI RAATTY 6 cut(s) 301, 643, 1459, 1564, 1644, 2080
AcuI CTGAAG 2 cut(s) 1241, 2948
AcyI GRCGYC 1 cut(s) 1152
AfaI GTAC 5 cut(s) 21, 1304, 1639, 1849, 2589
AfiI CCNNNNNNNGG 9 cut(s) 438, 1444, 1494, 1824, 2176, 2344, 2860, 2884, 3004
AflIII ACRYGT 1 cut(s) 526
AhdI GACNNNNNGTC 1 cut(s) 1156
AjnI CCWGG 1 cut(s) 1086
AjuI GAANNNNNNNTTGG 4 cut(s) 846, 878, 1148, 1180
Alw21I GWGCWC 3 cut(s) 786, 1018, 2394
Alw26I GTCTC 6 cut(s) 105, 174, 543, 759, 989, 2563
AlwI GGATC 2 cut(s) 760, 1576
Ama87I CYCGRG 1 cut(s) 2393
AoxI GGCC 8 cut(s) 129, 228, 636, 897, 1296, 1451, 1603, 2875
ApeKI GCWGC 9 cut(s) 291, 674, 1052, 1176, 1434, 1693, 2197, 2821, 3063
ApoI RAATTY 6 cut(s) 301, 643, 1459, 1564, 1644, 2080
ArsI GACNNNNNNTTYG 6 cut(s) 542, 574, 733, 765, 2855, 2887
AseI ATTAAT 2 cut(s) 1968, 2891
Asp700I GAANNNNTTC 4 cut(s) 861, 1393, 2043, 2589
AspLEI GCGC 1 cut(s) 454
AspS9I GGNCC 4 cut(s) 897, 1604, 2118, 2720
AsuC2I CCSGG 1 cut(s) 1187
AsuHPI GGTGA 4 cut(s) 398, 532, 805, 2465
AvaI CYCGRG 1 cut(s) 2393
AvaII GGWCC 2 cut(s) 2118, 2720
AxyI CCTNAGG 1 cut(s) 3110
BaeGI GKGCMC 1 cut(s) 2999
BaeI ACNNNNGTAYC 2 cut(s) 1710, 1743
BalI TGGCCA 2 cut(s) 1298, 1453
BanII GRGCYC 2 cut(s) 786, 2170
BbsI GAAGAC 5 cut(s) 276, 1218, 1476, 2410, 2942
Bbv12I GWGCWC 3 cut(s) 786, 1018, 2394
BbvI GCAGC 9 cut(s) 278, 686, 1064, 1163, 1421, 1680, 2184, 2808, 3075
BccI CCATC 7 cut(s) 431, 1325, 1400, 1876, 2338, 2522, 2560
BceAI ACGGC 2 cut(s) 320, 2322
BcgI CGANNNNNNTGC 2 cut(s) 1685, 1719
BciT130I CCWGG 1 cut(s) 1088
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 1 cut(s) 1187
BcoDI GTCTC 6 cut(s) 105, 174, 543, 759, 989, 2563
BfaI CTAG 9 cut(s) 23, 113, 678, 1064, 1700, 1974, 2259, 2370, 2985
BfmI CTRYAG 2 cut(s) 1556, 2055
BfoI RGCGCY 1 cut(s) 455
BfuAI ACCTGC 1 cut(s) 609
BglI GCCNNNNNGGC 1 cut(s) 288
BglII AGATCT 1 cut(s) 2627
BisI GCNGC 9 cut(s) 292, 675, 1053, 1177, 1435, 1694, 2198, 2822, 3064
BlpI GCTNAGC 2 cut(s) 1124, 2727
BlsI GCNGC 9 cut(s) 293, 676, 1054, 1178, 1436, 1695, 2199, 2823, 3065
BmcAI AGTACT 1 cut(s) 2589
Bme1390I CCNGG 2 cut(s) 1088, 1187
Bme18I GGWCC 2 cut(s) 2118, 2720
BmeRI GACNNNNNGTC 1 cut(s) 1156
BmeT110I CYCGRG 1 cut(s) 2393
BmgT120I GGNCC 4 cut(s) 897, 1604, 2118, 2720
BmiI GGNNCC 3 cut(s) 2063, 2256, 2376
BmrFI CCNGG 2 cut(s) 1088, 1187
BmrI ACTGGG 2 cut(s) 1942, 3028
BmsI GCATC 9 cut(s) 151, 208, 229, 1243, 1705, 1948, 2023, 2530, 3060
BmuI ACTGGG 2 cut(s) 1942, 3028
BpiI GAAGAC 5 cut(s) 276, 1218, 1476, 2410, 2942
BplI GAGNNNNNCTC 2 cut(s) 540, 572
BpmI CTGGAG 5 cut(s) 33, 990, 1526, 1775, 2705
Bpu1102I GCTNAGC 2 cut(s) 1124, 2727
BpuEI CTTGAG 6 cut(s) 146, 197, 590, 2297, 2468, 2616
BpuMI CCSGG 1 cut(s) 1187
Bsa29I ATCGAT 4 cut(s) 764, 1833, 2490, 2500
BsaBI GATNNNNATC 1 cut(s) 2496
BsaHI GRCGYC 1 cut(s) 1152
BsaI GGTCTC 1 cut(s) 989
BsaJI CCNNGG 5 cut(s) 195, 283, 432, 516, 1600
BsaWI WCCGGW 1 cut(s) 2695
BsaXI ACNNNNNCTCC 7 cut(s) 171, 201, 2137, 2167, 3087, 3117, 3119
Bsc4I CCNNNNNNNGG 9 cut(s) 438, 1444, 1494, 1824, 2176, 2344, 2860, 2884, 3004
Bse1I ACTGG 5 cut(s) 50, 1758, 1937, 2688, 3034
Bse21I CCTNAGG 1 cut(s) 3110
Bse3DI GCAATG 4 cut(s) 1153, 1854, 2742, 2939
Bse8I GATNNNNATC 1 cut(s) 2496
BseBI CCWGG 1 cut(s) 1088
BseCI ATCGAT 4 cut(s) 764, 1833, 2490, 2500
BseDI CCNNGG 5 cut(s) 195, 283, 432, 516, 1600
BseJI GATNNNNATC 1 cut(s) 2496
BseLI CCNNNNNNNGG 9 cut(s) 438, 1444, 1494, 1824, 2176, 2344, 2860, 2884, 3004
BseMI GCAATG 4 cut(s) 1153, 1854, 2742, 2939
BseMII CTCAG 3 cut(s) 213, 1115, 2741
BseNI ACTGG 5 cut(s) 50, 1758, 1937, 2688, 3034
BseRI GAGGAG 3 cut(s) 1592, 2861, 3095
BseSI GKGCMC 1 cut(s) 2999
BseX3I CGGCCG 1 cut(s) 2875
BseXI GCAGC 9 cut(s) 278, 686, 1064, 1163, 1421, 1680, 2184, 2808, 3075
Bsh1236I CGCG 1 cut(s) 1885
Bsh1285I CGRYCG 1 cut(s) 2878
BshFI GGCC 8 cut(s) 131, 230, 638, 899, 1298, 1453, 1605, 2877
BshVI ATCGAT 4 cut(s) 764, 1833, 2490, 2500
BsiEI CGRYCG 1 cut(s) 2878
BsiHKAI GWGCWC 3 cut(s) 786, 1018, 2394
BsiHKCI CYCGRG 1 cut(s) 2393
BsiSI CCGG 4 cut(s) 264, 1187, 2201, 2696
BslFI GGGAC 3 cut(s) 1057, 1388, 2441
BslI CCNNNNNNNGG 9 cut(s) 438, 1444, 1494, 1824, 2176, 2344, 2860, 2884, 3004
BsmAI GTCTC 6 cut(s) 105, 174, 543, 759, 989, 2563
BsmBI CGTCTC 1 cut(s) 174
BsmFI GGGAC 3 cut(s) 1057, 1388, 2441
BsmI GAATGC 2 cut(s) 1362, 2045
BsnI GGCC 8 cut(s) 131, 230, 638, 899, 1298, 1453, 1605, 2877
Bso31I GGTCTC 1 cut(s) 989
BsoBI CYCGRG 1 cut(s) 2393
Bsp1286I GDGCHC 5 cut(s) 786, 1018, 2170, 2394, 2999
Bsp1720I GCTNAGC 2 cut(s) 1124, 2727
Bsp19I CCATGG 2 cut(s) 432, 516
BspACI CCGC 6 cut(s) 164, 1479, 1885, 2462, 2566, 3061
BspANI GGCC 8 cut(s) 131, 230, 638, 899, 1298, 1453, 1605, 2877
BspCNI CTCAG 3 cut(s) 214, 1116, 2740
BspDI ATCGAT 4 cut(s) 764, 1833, 2490, 2500
BspFNI CGCG 1 cut(s) 1885
BspHI TCATGA 1 cut(s) 444
BspLI GGNNCC 3 cut(s) 2063, 2256, 2376
BspMI ACCTGC 1 cut(s) 609
BspPI GGATC 2 cut(s) 760, 1576
BspQI GCTCTTC 1 cut(s) 2826
BspTNI GGTCTC 1 cut(s) 989
BsrDI GCAATG 4 cut(s) 1153, 1854, 2742, 2939
BsrI ACTGG 5 cut(s) 50, 1758, 1937, 2688, 3034
BssECI CCNNGG 5 cut(s) 195, 283, 432, 516, 1600
BssNI GRCGYC 1 cut(s) 1152
BssT1I CCWWGG 3 cut(s) 432, 516, 1600
Bst2UI CCWGG 1 cut(s) 1088
Bst6I CTCTTC 4 cut(s) 366, 2400, 2798, 2826
BstACI GRCGYC 1 cut(s) 1152
BstC8I GCNNGC 8 cut(s) 429, 540, 544, 624, 636, 1432, 2435, 2733
BstDEI CTNAG 6 cut(s) 222, 1124, 1763, 2727, 2935, 3110
BstDSI CCRYGG 3 cut(s) 195, 432, 516
BstFNI CGCG 1 cut(s) 1885
BstH2I RGCGCY 1 cut(s) 455
BstHHI GCGC 1 cut(s) 454
BstMAI GTCTC 6 cut(s) 105, 174, 543, 759, 989, 2563
BstMCI CGRYCG 1 cut(s) 2878
BstMWI GCNNNNNNNGC 5 cut(s) 227, 288, 1690, 2732, 2981
BstNI CCWGG 1 cut(s) 1088
BstNSI RCATGY 6 cut(s) 97, 282, 530, 1915, 2417, 3020
BstSCI CCNGG 2 cut(s) 1086, 1185
BstSFI CTRYAG 2 cut(s) 1556, 2055
BstSLI GKGCMC 1 cut(s) 2999
BstUI CGCG 1 cut(s) 1885
BstV1I GCAGC 9 cut(s) 278, 686, 1064, 1163, 1421, 1680, 2184, 2808, 3075
BstV2I GAAGAC 5 cut(s) 276, 1218, 1476, 2410, 2942
BstX2I RGATCY 2 cut(s) 1581, 2627
BstYI RGATCY 2 cut(s) 1581, 2627
BstZI CGGCCG 1 cut(s) 2875
Bsu15I ATCGAT 4 cut(s) 764, 1833, 2490, 2500
Bsu36I CCTNAGG 1 cut(s) 3110
BsuRI GGCC 8 cut(s) 131, 230, 638, 899, 1298, 1453, 1605, 2877
BsuTUI ATCGAT 4 cut(s) 764, 1833, 2490, 2500
BtgI CCRYGG 3 cut(s) 195, 432, 516
BtsI GCAGTG 1 cut(s) 2528
BtsIMutI CAGTG 4 cut(s) 57, 471, 2226, 2528
BveI ACCTGC 1 cut(s) 609
Cac8I GCNNGC 8 cut(s) 429, 540, 544, 624, 636, 1432, 2435, 2733
CciI TCATGA 1 cut(s) 444
CfoI GCGC 1 cut(s) 454
Cfr13I GGNCC 4 cut(s) 897, 1604, 2118, 2720
ClaI ATCGAT 4 cut(s) 764, 1833, 2490, 2500
CseI GACGC 1 cut(s) 1160
Csp6I GTAC 5 cut(s) 20, 1303, 1638, 1848, 2588
CviQI GTAC 5 cut(s) 20, 1303, 1638, 1848, 2588
DdeI CTNAG 6 cut(s) 222, 1124, 1763, 2727, 2935, 3110
DriI GACNNNNNGTC 1 cut(s) 1156
EaeI YGGCCR 3 cut(s) 1296, 1451, 2875
EagI CGGCCG 1 cut(s) 2875
Eam1104I CTCTTC 4 cut(s) 366, 2400, 2798, 2826
Eam1105I GACNNNNNGTC 1 cut(s) 1156
EarI CTCTTC 4 cut(s) 366, 2400, 2798, 2826
Ecl136II GAGCTC 1 cut(s) 784
EclXI CGGCCG 1 cut(s) 2875
Eco130I CCWWGG 3 cut(s) 432, 516, 1600
Eco24I GRGCYC 2 cut(s) 786, 2170
Eco31I GGTCTC 1 cut(s) 989
Eco32I GATATC 3 cut(s) 825, 1201, 1881
Eco47I GGWCC 2 cut(s) 2118, 2720
Eco52I CGGCCG 1 cut(s) 2875
Eco53kI GAGCTC 1 cut(s) 784
Eco57I CTGAAG 2 cut(s) 1241, 2948
Eco81I CCTNAGG 1 cut(s) 3110
Eco88I CYCGRG 1 cut(s) 2393
EcoICRI GAGCTC 1 cut(s) 784
EcoRII CCWGG 1 cut(s) 1086
EcoRV GATATC 3 cut(s) 825, 1201, 1881
EcoT14I CCWWGG 3 cut(s) 432, 516, 1600
EcoT22I ATGCAT 2 cut(s) 1362, 1615
EcoT38I GRGCYC 2 cut(s) 786, 2170
ErhI CCWWGG 3 cut(s) 432, 516, 1600
Esp3I CGTCTC 1 cut(s) 174
FalI AAGNNNNNCTT 4 cut(s) 2457, 2489, 2577, 2609
FaqI GGGAC 3 cut(s) 1057, 1388, 2441
FauNDI CATATG 1 cut(s) 2711
FbaI TGATCA 1 cut(s) 562
FblI GTMKAC 1 cut(s) 1336
Fnu4HI GCNGC 9 cut(s) 292, 675, 1053, 1177, 1435, 1694, 2198, 2822, 3064
FriOI GRGCYC 2 cut(s) 786, 2170
Fsp4HI GCNGC 9 cut(s) 292, 675, 1053, 1177, 1435, 1694, 2198, 2822, 3064
FspBI CTAG 9 cut(s) 23, 113, 678, 1064, 1700, 1974, 2259, 2370, 2985
GlaI GCGC 1 cut(s) 453
GluI GCNGC 9 cut(s) 292, 675, 1053, 1177, 1435, 1694, 2198, 2822, 3064
GsuI CTGGAG 5 cut(s) 33, 990, 1526, 1775, 2705
HaeII RGCGCY 1 cut(s) 455
HaeIII GGCC 8 cut(s) 131, 230, 638, 899, 1298, 1453, 1605, 2877
HapII CCGG 4 cut(s) 264, 1187, 2201, 2696
HgaI GACGC 1 cut(s) 1160
HhaI GCGC 1 cut(s) 454
Hin1I GRCGYC 1 cut(s) 1152
Hin6I GCGC 1 cut(s) 452
HinP1I GCGC 1 cut(s) 452
HincII GTYRAC 1 cut(s) 2023
HindII GTYRAC 1 cut(s) 2023
HindIII AAGCTT 4 cut(s) 122, 362, 1311, 2965
HpaII CCGG 4 cut(s) 264, 1187, 2201, 2696
HphI GGTGA 4 cut(s) 398, 532, 805, 2465
Hpy166II GTNNAC 3 cut(s) 406, 1337, 2023
Hpy8I GTNNAC 3 cut(s) 406, 1337, 2023
Hpy99I CGWCG 2 cut(s) 1062, 2070
HpyAV CCTTC 9 cut(s) 220, 442, 679, 955, 1668, 1943, 2011, 2054, 3009
HpyF10VI GCNNNNNNNGC 5 cut(s) 227, 288, 1690, 2732, 2981
HpyF3I CTNAG 6 cut(s) 222, 1124, 1763, 2727, 2935, 3110
Hsp92I GRCGYC 1 cut(s) 1152
HspAI GCGC 1 cut(s) 452
Ksp22I TGATCA 1 cut(s) 562
LguI GCTCTTC 1 cut(s) 2826
LmnI GCTCC 6 cut(s) 789, 1689, 2254, 2518, 2603, 3127
Lsp1109I GCAGC 9 cut(s) 278, 686, 1064, 1163, 1421, 1680, 2184, 2808, 3075
LweI GCATC 9 cut(s) 151, 208, 229, 1243, 1705, 1948, 2023, 2530, 3060
MaeI CTAG 9 cut(s) 23, 113, 678, 1064, 1700, 1974, 2259, 2370, 2985
MaeIII GTNAC 4 cut(s) 314, 2221, 2347, 2365
MfeI CAATTG 2 cut(s) 990, 2825
MflI RGATCY 2 cut(s) 1581, 2627
MhlI GDGCHC 5 cut(s) 786, 1018, 2170, 2394, 2999
MlsI TGGCCA 2 cut(s) 1298, 1453
MluNI TGGCCA 2 cut(s) 1298, 1453
MlyI GAGTC 3 cut(s) 40, 1187, 2304
MmeI TCCRAC 2 cut(s) 2276, 3103
Mox20I TGGCCA 2 cut(s) 1298, 1453
Mph1103I ATGCAT 2 cut(s) 1362, 1615
MroXI GAANNNNTTC 4 cut(s) 861, 1393, 2043, 2589
MscI TGGCCA 2 cut(s) 1298, 1453
MslI CAYNNNNRTG 3 cut(s) 531, 2126, 2279
Msp20I TGGCCA 2 cut(s) 1298, 1453
MspI CCGG 4 cut(s) 264, 1187, 2201, 2696
MspR9I CCNGG 2 cut(s) 1088, 1187
MunI CAATTG 2 cut(s) 990, 2825
Mva1269I GAATGC 2 cut(s) 1362, 2045
MvaI CCWGG 1 cut(s) 1088
MvnI CGCG 1 cut(s) 1885
MwoI GCNNNNNNNGC 5 cut(s) 227, 288, 1690, 2732, 2981
NciI CCSGG 1 cut(s) 1187
NcoI CCATGG 2 cut(s) 432, 516
NdeI CATATG 1 cut(s) 2711
NlaIV GGNNCC 3 cut(s) 2063, 2256, 2376
NmuCI GTSAC 1 cut(s) 2221
NsiI ATGCAT 2 cut(s) 1362, 1615
NspI RCATGY 6 cut(s) 97, 282, 530, 1915, 2417, 3020
PaeR7I CTCGAG 1 cut(s) 2393
PagI TCATGA 1 cut(s) 444
PciI ACATGT 1 cut(s) 526
PciSI GCTCTTC 1 cut(s) 2826
PcsI WCGNNNNNNNCGW 1 cut(s) 2880
PctI GAATGC 2 cut(s) 1362, 2045
PdmI GAANNNNTTC 4 cut(s) 861, 1393, 2043, 2589
PfeI GAWTC 9 cut(s) 610, 862, 890, 932, 1369, 1416, 1775, 2689, 2903
PflMI CCANNNNNTGG 1 cut(s) 2860
PfoI TCCNGGA 1 cut(s) 1185
PkrI GCNGC 9 cut(s) 293, 676, 1054, 1178, 1436, 1695, 2199, 2823, 3065
PleI GAGTC 3 cut(s) 40, 1187, 2304
PpsI GAGTC 3 cut(s) 40, 1187, 2304
PscI ACATGT 1 cut(s) 526
PshBI ATTAAT 2 cut(s) 1968, 2891
PsiI TTATAA 1 cut(s) 719
Psp124BI GAGCTC 1 cut(s) 786
Psp6I CCWGG 1 cut(s) 1086
PspGI CCWGG 1 cut(s) 1086
PspN4I GGNNCC 3 cut(s) 2063, 2256, 2376
PspPI GGNCC 4 cut(s) 897, 1604, 2118, 2720
PsrI GAACNNNNNNTAC 2 cut(s) 2358, 2390
PsuI RGATCY 2 cut(s) 1581, 2627
RsaI GTAC 5 cut(s) 21, 1304, 1639, 1849, 2589
RsaNI GTAC 5 cut(s) 20, 1303, 1638, 1848, 2588
RseI CAYNNNNRTG 3 cut(s) 531, 2126, 2279
SacI GAGCTC 1 cut(s) 786
SapI GCTCTTC 1 cut(s) 2826
SatI GCNGC 9 cut(s) 292, 675, 1053, 1177, 1435, 1694, 2198, 2822, 3064
Sau96I GGNCC 4 cut(s) 897, 1604, 2118, 2720
ScaI AGTACT 1 cut(s) 2589
SchI GAGTC 3 cut(s) 40, 1187, 2304
ScrFI CCNGG 2 cut(s) 1088, 1187
SduI GDGCHC 5 cut(s) 786, 1018, 2170, 2394, 2999
SfaNI GCATC 9 cut(s) 151, 208, 229, 1243, 1705, 1948, 2023, 2530, 3060
SfcI CTRYAG 2 cut(s) 1556, 2055
Sfr274I CTCGAG 1 cut(s) 2393
SinI GGWCC 2 cut(s) 2118, 2720
SlaI CTCGAG 1 cut(s) 2393
SmiMI CAYNNNNRTG 3 cut(s) 531, 2126, 2279
SmlI CTYRAG 7 cut(s) 125, 212, 605, 2312, 2393, 2483, 2631
SmoI CTYRAG 7 cut(s) 125, 212, 605, 2312, 2393, 2483, 2631
SsiI CCGC 6 cut(s) 164, 1479, 1885, 2462, 2566, 3061
SspI AATATT 1 cut(s) 874
SspMI CTAG 9 cut(s) 23, 113, 678, 1064, 1700, 1974, 2259, 2370, 2985
SstI GAGCTC 1 cut(s) 786
StyD4I CCNGG 2 cut(s) 1086, 1185
StyI CCWWGG 3 cut(s) 432, 516, 1600
TaqII GACCGA 1 cut(s) 2106
TatI WGTACW 1 cut(s) 2587
TfiI GAWTC 9 cut(s) 610, 862, 890, 932, 1369, 1416, 1775, 2689, 2903
TscAI CASTG 4 cut(s) 57, 478, 2226, 2528
TseFI GTSAC 1 cut(s) 2221
TseI GCWGC 9 cut(s) 291, 674, 1052, 1176, 1434, 1693, 2197, 2821, 3063
Tsp45I GTSAC 1 cut(s) 2221
TspGWI ACGGA 5 cut(s) 184, 1359, 1736, 2054, 2240
TspRI CASTG 4 cut(s) 57, 478, 2226, 2528
Van91I CCANNNNNTGG 1 cut(s) 2860
VpaK11BI GGWCC 2 cut(s) 2118, 2720
VspI ATTAAT 2 cut(s) 1968, 2891
XapI RAATTY 6 cut(s) 301, 643, 1459, 1564, 1644, 2080
XbaI TCTAGA 1 cut(s) 1699
XceI RCATGY 6 cut(s) 97, 282, 530, 1915, 2417, 3020
XhoI CTCGAG 1 cut(s) 2393
XmiI GTMKAC 1 cut(s) 1336
XmnI GAANNNNTTC 4 cut(s) 861, 1393, 2043, 2589
XspI CTAG 9 cut(s) 23, 113, 678, 1064, 1700, 1974, 2259, 2370, 2985
ZrmI AGTACT 1 cut(s) 2589
Zsp2I ATGCAT 2 cut(s) 1362, 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.