Rmu_sc0002187.1_g000060

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002187.1
OG0000085
Physical Location & Seq
Reverse (-)
248052 .. 252386
4335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002187.1_g000060.1.cds

Sequence Viewer

Length: 3987 bp
atggcctccatctctcgaaaaactgatggttctcttccttcatcagctgaaccatcatcagcagctggtctgtgggagtatgacgtgtatttgagtttcaggggtgaagacactcgatacaattttacagcccatttacacgatctgctggtaagcaagggaatcacagtattcagggatgaatttgtttttacaggaggggatacgactatggttctgtccctaaaggcaattgaagaatcaaggttcgcaattattctcctgtcccgaaactatgcttcttctgcttggtgtttggaggaacttagaatcatttgtcagttcatggaagacggcgccagagttattccagttttttataatgtcaaccctagtgatgtaagaaatcaaaaggggatttttcaagatgctttgaccgagcatgaaaggtctgggcgatacggatcggagaaggtccagcagtggagatatgctttaagaaaactggacagtttttcagggttgcatagccaggattataagactgactcagatcttctcaaagccattgtggaatgtctgtgcagtaaactacaacctgttgtggaaattgaagcaacaagacaagccacaattgaatttgtgcctacaatgccaaagttgactgaagattttgaaagagttgaaagagttgaaacaacaacacaagctaccaatggaaactctgaaccagctcctcagtggaaccatgatgtgtttttgagctttaggggtgatgacactcgcaagggttttctatcccatttataccatgaattgcaaaaaacgaaagttattagaacatttaaggatgctgaccaactaaagaaagggaaggatatttctcaaagtctgttgatggcaattgaagaatcaaggtttgcgatcattgttttgtcggaagactatgcttcttctgcatggtgtttagatgaactttcaaagatttttcaatgcatggaaggcaaggatacaattctgccaattttttatcatgtggatccctctgatgtacgatatcaaaagggtcaatttgaagtggcctttacaaagcatgaaagcaagggaaggtatggtatagagaaggtgaagcagtggagagctgatttaacaaaagtgggaaatctctttgggtgggattcaaagaaccacaaatctgaaagggaactcgttgaagacattgtgaaatttgtgctcaaagaagtacttcaagcaccaaggggagattttgaagaatttgaagcaacaagagaagccatggatgaggttaagaagatgctgaaagatgataagatcactgccattggtgtctatggaagaggaggcgttggcaagacagccatggtgaaacatgtcactgcacaagccaaaggcattgggctttttgatcatgttgttatggctgttatatcccgaaaccctgatttgcaaaaaattcaaggtgcattggtaaatcagctgggattggaattggtggaggatgaagaaatagaaagagccggtagattgaagaagaggatcatggcaggaaagaggatccttattatcttggatgacatttgggagataatagatttgtcaagcattggaattcctggctatgatgagcttcaaagatgcaattccaaggtcctactcaccacaaggatgaggaatatttgtcattctatggggtgccaagctcacattcctctcaatatcctatcagagcaagattctttgaagttattcatgaagaagttgagaaagccttttcatggacctaccgattcttatgatgaagagaggaacatagttagagaatgcgctggtctcccaagtgttttggaagaagctgcaagggcatttggacataaatacatggaagaatggaacgaagcagtttcaaaggcgtttagagatgatgatgatgatgatgatgaattgcaaaaagcagctcaagaactaaatgcatcccaacttgtccccactaaagatgagagagatacatttaaaaggacagagttatgctatcataccttgaggtttgatgatgccaagtcatttttcttgctttgctgcatgtttccagaagattatgatatcccaattgaagacttgtttaagtatgggattggaaaaggtttgcttcggtattcagacacattgcaagaagccagagaccgagcacattctttggtcgcataccttaaagcttcggggttgcttttggatggcaagaagggatgcataaggatgcattttgacatccgaaatgcggccatgtctattgcgttgtctgaaggtcatgcttttttcgtaaaagctggttgtgaattgaaggattggccagtggatgctcatgaaggctactcagcaatctcactaatgaggaacaaacttaacaagcttcctgaaactctggtatgttccgaactccaaattctactgctgcaaagtaatgccggtataagtgacgttccaaaaactttttttcaaagtctaaatgcactaagggtctttgatcttagctataccggtatttcagtactaccctcttcgttcaatctcctcaccaacctgcaagccttgtgtttggattgttgcaataaaataactgacatatccgtacttgggaagctgaagaaagttgagattctcagtttgagaaaatttcctcataaggagttgccgaaagagataggaaatttgaccagtctaaggatgctggacgtcactggtggatgtcttcacaaaattccctctgaagtgatatcgaggttgtatagattggaagaattgtacatgaaatgtgaatttgggaactggggaagtacagtcgaggaagcagtcggacaaacaaatgccgactttgatgagataattggcttgtcctggttaaacattttgaaggtttacatatctgatgcagcttgcttacccgaagatattgggtactttgagccgaattgggtaaaatttgacatatgcatcagcggagatctctcttcggaaatgatgctttcttcgaataatcaaccttcaagaaccttgactcttgacagaacaatcaatggcttatctgattggtttatcaacgtggtgacgcagaaagcagaaaaactagaatacagagagtgtaagggattaaacaacattctcaaggaatatgagcatgggagattacatgggctcaagcatctctctgtaattgggtgccatgaaaacttggaagagttgataaatgcaacaacatgggatccaagtaaacctgtgttcgagagcttggaagagctgcatctccttcacttgcaacgcctcaaggagttatgtgttggcgaattaccactgggatctctgtgcaatctcaagctattgaaggtgcaaacttgttgtaacttggtgaatgcatttttaccaccaaaattgttgcagagactaacaaacctagaaacaatattttgtgtaaatatggaacacatgaaatatttgtttggctctgaagggctggagcttggaacgactctcttgacaaaattgagcgaggtgagactgtgcgctctcttcgaactaataagcatctggaatggtccggcaccaaatgcaatctttgggaatcttaaagttttggcagtttgcaagtgtacaaaactgaaaaatctattcccattcgatgtagctcgatctcttgtgcaattggaagacctctctgtagagcgctgccctaacttgggcagagttattgaagcatgcaacagcttgaacagatgtatcttttttccagaattgaagaaattagctttgatagatcttccagagctcacatggttctgcaccgaaaatggtactgttcatatcgagtgccctctgttggaatacttgtttgtggatgagtgcccccagtttgtaaactctgcttctgcttctgttaaactcaacgatcaacaacatttgaattctctagtgataaggtatgtctctgcgttataa

Protein Analysis

1328

Amino Acids

150.55

Weight (kDa)

5.6

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 360, 519, 3985
AatII GACGTC 1 cut(s) 2733
Acc36I ACCTGC 1 cut(s) 2586
AccB1I GGYRCC 4 cut(s) 335, 1692, 3213, 3592
AciI CCGC 2 cut(s) 2276, 2994
AclWI GGATC 9 cut(s) 451, 1013, 1026, 1544, 1549, 1562, 3251, 3264, 3358
AcoI YGGCCR 2 cut(s) 2277, 2345
AcuI CTGAAG 5 cut(s) 666, 2319, 2660, 2784, 3519
AcyI GRCGYC 2 cut(s) 336, 2730
AfaI GTAC 9 cut(s) 1032, 1224, 2547, 2628, 2801, 2833, 2954, 3643, 3844
AfeI AGCGCT 1 cut(s) 3716
AfiI CCNNNNNNNGG 7 cut(s) 1775, 2275, 2631, 2718, 3727, 3728, 3868
AflIII ACRYGT 2 cut(s) 84, 1369
AgeI ACCGGT 1 cut(s) 2534
AjiI CACGTC 1 cut(s) 85
AjnI CCWGG 3 cut(s) 510, 1612, 2891
AjuI GAANNNNNNNTTGG 4 cut(s) 1689, 1721, 2048, 2080
Alw21I GWGCWC 3 cut(s) 1215, 2188, 3819
Alw26I GTCTC 5 cut(s) 1835, 2172, 3427, 3541, 3979
AlwI GGATC 9 cut(s) 451, 1013, 1026, 1544, 1549, 1562, 3251, 3264, 3358
AlwNI CAGNNNCTG 1 cut(s) 65
Aor51HI AGCGCT 1 cut(s) 3716
AoxI GGCC 4 cut(s) 3, 1059, 2277, 2345
ApeKI GCWGC 8 cut(s) 62, 1853, 1952, 2076, 2449, 2927, 3292, 3717
AsiGI ACCGGT 1 cut(s) 2534
Asp700I GAANNNNTTC 2 cut(s) 1224, 1745
AspLEI GCGC 4 cut(s) 338, 1826, 3557, 3717
AspS9I GGNCC 4 cut(s) 454, 1648, 1778, 3587
AsuHPI GGTGA 9 cut(s) 116, 764, 1117, 1375, 1648, 2563, 3112, 3412, 3556
AsuII TTCGAA 2 cut(s) 3026, 3564
AvaII GGWCC 4 cut(s) 454, 1648, 1778, 3587
BaeGI GKGCMC 2 cut(s) 3863, 3896
BaeI ACNNNNGTAYC 2 cut(s) 3751, 3784
BalI TGGCCA 1 cut(s) 2347
BamHI GGATCC 3 cut(s) 1018, 1554, 3256
BanI GGYRCC 4 cut(s) 335, 1692, 3213, 3592
BanII GRGCYC 2 cut(s) 3192, 3819
BbsI GAAGAC 7 cut(s) 114, 336, 927, 1200, 2118, 2738, 3705
Bbv12I GWGCWC 3 cut(s) 1215, 2188, 3819
BbvI GCAGC 8 cut(s) 74, 1840, 1964, 2063, 2436, 2939, 3279, 3704
BccI CCATC 5 cut(s) 17, 20, 61, 871, 2225
BceAI ACGGC 1 cut(s) 349
BciT130I CCWGG 3 cut(s) 512, 1614, 2893
BciVI GTATCC 2 cut(s) 196, 982
BclI TGATCA 1 cut(s) 1405
BcoDI GTCTC 5 cut(s) 1835, 2172, 3427, 3541, 3979
BfaI CTAG 4 cut(s) 372, 3122, 3446, 3959
BfmI CTRYAG 1 cut(s) 3708
BfoI RGCGCY 2 cut(s) 339, 3718
BfuAI ACCTGC 1 cut(s) 2586
BfuI GTATCC 2 cut(s) 196, 982
BglII AGATCT 3 cut(s) 532, 2998, 3805
BisI GCNGC 9 cut(s) 63, 1854, 1953, 2077, 2277, 2450, 2928, 3293, 3718
BlsI GCNGC 9 cut(s) 64, 1855, 1954, 2078, 2278, 2451, 2929, 3294, 3719
BmcAI AGTACT 2 cut(s) 1224, 2547
Bme1390I CCNGG 3 cut(s) 512, 1614, 2893
Bme18I GGWCC 4 cut(s) 454, 1648, 1778, 3587
BmgBI CACGTC 1 cut(s) 85
BmgT120I GGNCC 4 cut(s) 454, 1648, 1778, 3587
BmiI GGNNCC 8 cut(s) 337, 725, 1020, 1556, 1694, 3215, 3258, 3594
BmrFI CCNGG 3 cut(s) 512, 1614, 2893
BmrI ACTGGG 3 cut(s) 2833, 3356, 3892
BmuI ACTGGG 3 cut(s) 2833, 3356, 3892
BpiI GAAGAC 7 cut(s) 114, 336, 927, 1200, 2118, 2738, 3705
BpmI CTGGAG 1 cut(s) 3527
Bpu14I TTCGAA 2 cut(s) 3026, 3564
BpuEI CTTGAG 6 cut(s) 1941, 2059, 3143, 3176, 3302, 3350
BsaBI GATNNNNATC 1 cut(s) 442
BsaHI GRCGYC 2 cut(s) 336, 2730
BsaI GGTCTC 2 cut(s) 1835, 2172
BsaJI CCNNGG 4 cut(s) 1235, 1275, 1359, 1644
BsaWI WCCGGW 1 cut(s) 2534
Bsc4I CCNNNNNNNGG 7 cut(s) 1775, 2275, 2631, 2718, 3727, 3728, 3868
Bse118I RCCGGY 3 cut(s) 1517, 2462, 2534
Bse1I ACTGG 8 cut(s) 350, 489, 2348, 2712, 2740, 2828, 3351, 3898
Bse3DI GCAATG 1 cut(s) 2162
Bse8I GATNNNNATC 1 cut(s) 442
BseBI CCWGG 3 cut(s) 512, 1614, 2893
BseDI CCNNGG 4 cut(s) 1235, 1275, 1359, 1644
BseJI GATNNNNATC 1 cut(s) 442
BseLI CCNNNNNNNGG 7 cut(s) 1775, 2275, 2631, 2718, 3727, 3728, 3868
BseMI GCAATG 1 cut(s) 2162
BseMII CTCAG 4 cut(s) 543, 731, 2385, 2671
BseNI ACTGG 8 cut(s) 350, 489, 2348, 2712, 2740, 2828, 3351, 3898
BseRI GAGGAG 3 cut(s) 705, 1353, 2558
BseSI GKGCMC 2 cut(s) 3863, 3896
BseXI GCAGC 8 cut(s) 74, 1840, 1964, 2063, 2436, 2939, 3279, 3704
BseYI CCCAGC 1 cut(s) 1477
BsgI GTGCAG 3 cut(s) 583, 1362, 3814
BshFI GGCC 4 cut(s) 5, 1061, 2279, 2347
BshNI GGYRCC 4 cut(s) 335, 1692, 3213, 3592
BshTI ACCGGT 1 cut(s) 2534
BsiHKAI GWGCWC 3 cut(s) 1215, 2188, 3819
BsiSI CCGG 4 cut(s) 1518, 2463, 2535, 3590
BslFI GGGAC 3 cut(s) 205, 250, 1967
BslI CCNNNNNNNGG 7 cut(s) 1775, 2275, 2631, 2718, 3727, 3728, 3868
BsmAI GTCTC 5 cut(s) 1835, 2172, 3427, 3541, 3979
BsmFI GGGAC 3 cut(s) 205, 250, 1967
BsmI GAATGC 2 cut(s) 1826, 3409
BsnI GGCC 4 cut(s) 5, 1061, 2279, 2347
Bso31I GGTCTC 2 cut(s) 1835, 2172
Bsp119I TTCGAA 2 cut(s) 3026, 3564
Bsp1286I GDGCHC 6 cut(s) 1215, 2188, 3192, 3819, 3863, 3896
Bsp1407I TGTACA 2 cut(s) 2799, 3641
Bsp19I CCATGG 2 cut(s) 1275, 1359
BspACI CCGC 2 cut(s) 2276, 2994
BspANI GGCC 4 cut(s) 5, 1061, 2279, 2347
BspCNI CTCAG 4 cut(s) 542, 730, 2384, 2670
BspHI TCATGA 2 cut(s) 1749, 2359
BspLI GGNNCC 8 cut(s) 337, 725, 1020, 1556, 1694, 3215, 3258, 3594
BspMI ACCTGC 1 cut(s) 2586
BspPI GGATC 9 cut(s) 451, 1013, 1026, 1544, 1549, 1562, 3251, 3264, 3358
BspQI GCTCTTC 1 cut(s) 3282
BspT104I TTCGAA 2 cut(s) 3026, 3564
BspT107I GGYRCC 4 cut(s) 335, 1692, 3213, 3592
BspTNI GGTCTC 2 cut(s) 1835, 2172
BsrDI GCAATG 1 cut(s) 2162
BsrFI RCCGGY 3 cut(s) 1517, 2462, 2534
BsrGI TGTACA 2 cut(s) 2799, 3641
BsrI ACTGG 8 cut(s) 350, 489, 2348, 2712, 2740, 2828, 3351, 3898
BssAI RCCGGY 3 cut(s) 1517, 2462, 2534
BssECI CCNNGG 4 cut(s) 1235, 1275, 1359, 1644
BssNI GRCGYC 2 cut(s) 336, 2730
BssT1I CCWWGG 4 cut(s) 1235, 1275, 1359, 1644
Bst2UI CCWGG 3 cut(s) 512, 1614, 2893
Bst4CI ACNGT 5 cut(s) 169, 491, 2836, 3552, 3847
Bst6I CTCTTC 9 cut(s) 39, 1330, 1526, 1794, 2560, 3010, 3225, 3282, 3566
BstACI GRCGYC 2 cut(s) 336, 2730
BstAPI GCANNNNNTGC 1 cut(s) 3599
BstAUI TGTACA 2 cut(s) 2799, 3641
BstBI TTCGAA 2 cut(s) 3026, 3564
BstC8I GCNNGC 3 cut(s) 2583, 2932, 3748
BstDEI CTNAG 8 cut(s) 305, 529, 717, 2371, 2510, 2525, 2657, 2717
BstDSI CCRYGG 2 cut(s) 1275, 1359
BstH2I RGCGCY 2 cut(s) 339, 3718
BstHHI GCGC 4 cut(s) 338, 1826, 3557, 3717
BstMAI GTCTC 5 cut(s) 1835, 2172, 3427, 3541, 3979
BstMWI GCNNNNNNNGC 6 cut(s) 284, 631, 935, 981, 1859, 3599
BstNI CCWGG 3 cut(s) 512, 1614, 2893
BstNSI RCATGY 3 cut(s) 1373, 2083, 3750
BstSCI CCNGG 3 cut(s) 510, 1612, 2891
BstSFI CTRYAG 1 cut(s) 3708
BstSLI GKGCMC 2 cut(s) 3863, 3896
BstV1I GCAGC 8 cut(s) 74, 1840, 1964, 2063, 2436, 2939, 3279, 3704
BstV2I GAAGAC 7 cut(s) 114, 336, 927, 1200, 2118, 2738, 3705
BstX2I RGATCY 7 cut(s) 532, 1018, 1554, 2998, 3256, 3350, 3805
BstYI RGATCY 7 cut(s) 532, 1018, 1554, 2998, 3256, 3350, 3805
BsuI GTATCC 2 cut(s) 196, 982
BsuRI GGCC 4 cut(s) 5, 1061, 2279, 2347
BtgI CCRYGG 2 cut(s) 1275, 1359
BtrI CACGTC 1 cut(s) 85
BtsI GCAGTG 4 cut(s) 467, 1118, 1314, 1374
BtsIMutI CAGTG 8 cut(s) 467, 725, 1118, 1314, 1374, 2355, 2733, 3344
BveI ACCTGC 1 cut(s) 2586
Cac8I GCNNGC 3 cut(s) 2583, 2932, 3748
CaiI CAGNNNCTG 1 cut(s) 65
CciI TCATGA 2 cut(s) 1749, 2359
CfoI GCGC 4 cut(s) 338, 1826, 3557, 3717
Cfr10I RCCGGY 3 cut(s) 1517, 2462, 2534
Cfr13I GGNCC 4 cut(s) 454, 1648, 1778, 3587
CseI GACGC 1 cut(s) 3112
Csp6I GTAC 9 cut(s) 1031, 1223, 2546, 2627, 2800, 2832, 2953, 3642, 3843
CspAI ACCGGT 1 cut(s) 2534
CspCI CAANNNNNGTGG 2 cut(s) 3405, 3440
CviQI GTAC 9 cut(s) 1031, 1223, 2546, 2627, 2800, 2832, 2953, 3642, 3843
DdeI CTNAG 8 cut(s) 305, 529, 717, 2371, 2510, 2525, 2657, 2717
DinI GGCGCC 1 cut(s) 337
DraI TTTAAA 1 cut(s) 2011
EaeI YGGCCR 2 cut(s) 2277, 2345
Eam1104I CTCTTC 9 cut(s) 39, 1330, 1526, 1794, 2560, 3010, 3225, 3282, 3566
EarI CTCTTC 9 cut(s) 39, 1330, 1526, 1794, 2560, 3010, 3225, 3282, 3566
Ecl136II GAGCTC 1 cut(s) 3817
Eco130I CCWWGG 4 cut(s) 1235, 1275, 1359, 1644
Eco24I GRGCYC 2 cut(s) 3192, 3819
Eco31I GGTCTC 2 cut(s) 1835, 2172
Eco32I GATATC 3 cut(s) 1037, 2101, 2772
Eco47I GGWCC 4 cut(s) 454, 1648, 1778, 3587
Eco47III AGCGCT 1 cut(s) 3716
Eco53kI GAGCTC 1 cut(s) 3817
Eco57I CTGAAG 5 cut(s) 666, 2319, 2660, 2784, 3519
EcoICRI GAGCTC 1 cut(s) 3817
EcoO109I RGGNCCY 1 cut(s) 1648
EcoRI GAATTC 2 cut(s) 1608, 3952
EcoRII CCWGG 3 cut(s) 510, 1612, 2891
EcoRV GATATC 3 cut(s) 1037, 2101, 2772
EcoT14I CCWWGG 4 cut(s) 1235, 1275, 1359, 1644
EcoT22I ATGCAT 6 cut(s) 977, 1972, 2249, 2259, 2990, 3409
EcoT38I GRGCYC 2 cut(s) 3192, 3819
EgeI GGCGCC 1 cut(s) 337
EheI GGCGCC 1 cut(s) 337
ErhI CCWWGG 4 cut(s) 1235, 1275, 1359, 1644
FalI AAGNNNNNCTT 4 cut(s) 1209, 1241, 2130, 2162
FaqI GGGAC 3 cut(s) 205, 250, 1967
FauNDI CATATG 1 cut(s) 2984
FbaI TGATCA 1 cut(s) 1405
Fnu4HI GCNGC 9 cut(s) 63, 1854, 1953, 2077, 2277, 2450, 2928, 3293, 3718
FriOI GRGCYC 2 cut(s) 3192, 3819
Fsp4HI GCNGC 9 cut(s) 63, 1854, 1953, 2077, 2277, 2450, 2928, 3293, 3718
FspBI CTAG 4 cut(s) 372, 3122, 3446, 3959
GlaI GCGC 4 cut(s) 337, 1825, 3556, 3716
GluI GCNGC 9 cut(s) 63, 1854, 1953, 2077, 2277, 2450, 2928, 3293, 3718
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 1 cut(s) 3527
HaeII RGCGCY 2 cut(s) 339, 3718
HaeIII GGCC 4 cut(s) 5, 1061, 2279, 2347
HapII CCGG 4 cut(s) 1518, 2463, 2535, 3590
HgaI GACGC 1 cut(s) 3112
HhaI GCGC 4 cut(s) 338, 1826, 3557, 3717
Hin1I GRCGYC 2 cut(s) 336, 2730
Hin6I GCGC 4 cut(s) 336, 1824, 3555, 3715
HinP1I GCGC 4 cut(s) 336, 1824, 3555, 3715
HincII GTYRAC 2 cut(s) 367, 642
HindII GTYRAC 2 cut(s) 367, 642
HindIII AAGCTT 2 cut(s) 2211, 2405
HpaII CCGG 4 cut(s) 1518, 2463, 2535, 3590
HphI GGTGA 9 cut(s) 116, 764, 1117, 1375, 1648, 2563, 3112, 3412, 3556
Hpy166II GTNNAC 7 cut(s) 367, 569, 642, 2914, 3266, 3642, 3907
Hpy8I GTNNAC 7 cut(s) 367, 569, 642, 2914, 3266, 3642, 3907
HpyCH4III ACNGT 5 cut(s) 169, 491, 2836, 3552, 3847
HpyCH4IV ACGT 4 cut(s) 84, 2475, 2730, 3096
HpyF10VI GCNNNNNNNGC 6 cut(s) 284, 631, 935, 981, 1859, 3599
HpyF3I CTNAG 8 cut(s) 305, 529, 717, 2371, 2510, 2525, 2657, 2717
HpySE526I ACGT 4 cut(s) 84, 2475, 2730, 3096
Hsp92I GRCGYC 2 cut(s) 336, 2730
HspAI GCGC 4 cut(s) 336, 1824, 3555, 3715
KasI GGCGCC 1 cut(s) 335
Ksp22I TGATCA 1 cut(s) 1405
LguI GCTCTTC 1 cut(s) 3282
LmnI GCTCC 2 cut(s) 718, 3508
Lsp1109I GCAGC 8 cut(s) 74, 1840, 1964, 2063, 2436, 2939, 3279, 3704
MaeI CTAG 4 cut(s) 372, 3122, 3446, 3959
MaeII ACGT 4 cut(s) 84, 2475, 2730, 3096
MaeIII GTNAC 5 cut(s) 1372, 2471, 2731, 3100, 3392
MfeI CAATTG 5 cut(s) 231, 612, 882, 2106, 3692
MflI RGATCY 7 cut(s) 532, 1018, 1554, 2998, 3256, 3350, 3805
MhlI GDGCHC 6 cut(s) 1215, 2188, 3192, 3819, 3863, 3896
MlsI TGGCCA 1 cut(s) 2347
MluNI TGGCCA 1 cut(s) 2347
Mly113I GGCGCC 1 cut(s) 336
MlyI GAGTC 3 cut(s) 521, 3046, 3514
MmeI TCCRAC 3 cut(s) 897, 2830, 3849
Mox20I TGGCCA 1 cut(s) 2347
Mph1103I ATGCAT 6 cut(s) 977, 1972, 2249, 2259, 2990, 3409
MroXI GAANNNNTTC 2 cut(s) 1224, 1745
MscI TGGCCA 1 cut(s) 2347
MslI CAYNNNNRTG 2 cut(s) 1664, 2252
Msp20I TGGCCA 1 cut(s) 2347
MspA1I CMGCKG 4 cut(s) 47, 65, 1477, 2994
MspI CCGG 4 cut(s) 1518, 2463, 2535, 3590
MspR9I CCNGG 3 cut(s) 512, 1614, 2893
MunI CAATTG 5 cut(s) 231, 612, 882, 2106, 3692
Mva1269I GAATGC 2 cut(s) 1826, 3409
MvaI CCWGG 3 cut(s) 512, 1614, 2893
MwoI GCNNNNNNNGC 6 cut(s) 284, 631, 935, 981, 1859, 3599
NarI GGCGCC 1 cut(s) 336
NcoI CCATGG 2 cut(s) 1275, 1359
NdeI CATATG 1 cut(s) 2984
NlaIV GGNNCC 8 cut(s) 337, 725, 1020, 1556, 1694, 3215, 3258, 3594
NmuCI GTSAC 4 cut(s) 1372, 2471, 2731, 3100
NsiI ATGCAT 6 cut(s) 977, 1972, 2249, 2259, 2990, 3409
NspI RCATGY 3 cut(s) 1373, 2083, 3750
NspV TTCGAA 2 cut(s) 3026, 3564
PaeI GCATGC 1 cut(s) 3750
PagI TCATGA 2 cut(s) 1749, 2359
PciI ACATGT 1 cut(s) 1369
PciSI GCTCTTC 1 cut(s) 3282
PctI GAATGC 2 cut(s) 1826, 3409
PdmI GAANNNNTTC 2 cut(s) 1224, 1745
PfeI GAWTC 9 cut(s) 162, 239, 309, 890, 1157, 1733, 1787, 2653, 3613
PinAI ACCGGT 1 cut(s) 2534
PkrI GCNGC 9 cut(s) 64, 1855, 1954, 2078, 2278, 2451, 2929, 3294, 3719
PleI GAGTC 3 cut(s) 521, 3046, 3514
PluTI GGCGCC 1 cut(s) 339
PpsI GAGTC 3 cut(s) 521, 3046, 3514
PpuMI RGGWCCY 1 cut(s) 1648
PscI ACATGT 1 cut(s) 1369
PsiI TTATAA 3 cut(s) 360, 519, 3985
Psp124BI GAGCTC 1 cut(s) 3819
Psp5II RGGWCCY 1 cut(s) 1648
Psp6I CCWGG 3 cut(s) 510, 1612, 2891
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 3 cut(s) 510, 1612, 2891
PspN4I GGNNCC 8 cut(s) 337, 725, 1020, 1556, 1694, 3215, 3258, 3594
PspPI GGNCC 4 cut(s) 454, 1648, 1778, 3587
PspPPI RGGWCCY 1 cut(s) 1648
PstNI CAGNNNCTG 1 cut(s) 65
PsuI RGATCY 7 cut(s) 532, 1018, 1554, 2998, 3256, 3350, 3805
PvuII CAGCTG 3 cut(s) 47, 65, 1477
RsaI GTAC 9 cut(s) 1032, 1224, 2547, 2628, 2801, 2833, 2954, 3643, 3844
RsaNI GTAC 9 cut(s) 1031, 1223, 2546, 2627, 2800, 2832, 2953, 3642, 3843
RseI CAYNNNNRTG 2 cut(s) 1664, 2252
SacI GAGCTC 1 cut(s) 3819
SapI GCTCTTC 1 cut(s) 3282
SatI GCNGC 9 cut(s) 63, 1854, 1953, 2077, 2277, 2450, 2928, 3293, 3718
Sau96I GGNCC 4 cut(s) 454, 1648, 1778, 3587
ScaI AGTACT 2 cut(s) 1224, 2547
SchI GAGTC 3 cut(s) 521, 3046, 3514
ScrFI CCNGG 3 cut(s) 512, 1614, 2893
SduI GDGCHC 6 cut(s) 1215, 2188, 3192, 3819, 3863, 3896
SfcI CTRYAG 1 cut(s) 3708
SfoI GGCGCC 1 cut(s) 337
SfuI TTCGAA 2 cut(s) 3026, 3564
SinI GGWCC 4 cut(s) 454, 1648, 1778, 3587
SmiMI CAYNNNNRTG 2 cut(s) 1664, 2252
SmlI CTYRAG 6 cut(s) 1956, 2038, 3158, 3191, 3317, 3365
SmoI CTYRAG 6 cut(s) 1956, 2038, 3158, 3191, 3317, 3365
SphI GCATGC 1 cut(s) 3750
SsiI CCGC 2 cut(s) 2276, 2994
SspDI GGCGCC 1 cut(s) 335
SspI AATATT 3 cut(s) 1675, 3456, 3485
SspMI CTAG 4 cut(s) 372, 3122, 3446, 3959
SstI GAGCTC 1 cut(s) 3819
StyD4I CCNGG 3 cut(s) 510, 1612, 2891
StyI CCWWGG 4 cut(s) 1235, 1275, 1359, 1644
TaaI ACNGT 5 cut(s) 169, 491, 2836, 3552, 3847
TaiI ACGT 4 cut(s) 87, 2478, 2733, 3099
TaqII GACCGA 2 cut(s) 431, 2196
TatI WGTACW 5 cut(s) 1222, 2545, 2799, 2831, 3641
TauI GCSGC 1 cut(s) 2279
TfiI GAWTC 9 cut(s) 162, 239, 309, 890, 1157, 1733, 1787, 2653, 3613
TscAI CASTG 8 cut(s) 467, 725, 1118, 1321, 1381, 2355, 2740, 3351
TseFI GTSAC 4 cut(s) 1372, 2471, 2731, 3100
TseI GCWGC 8 cut(s) 62, 1853, 1952, 2076, 2449, 2927, 3292, 3717
Tsp45I GTSAC 4 cut(s) 1372, 2471, 2731, 3100
TspGWI ACGGA 2 cut(s) 456, 2614
TspRI CASTG 8 cut(s) 467, 725, 1118, 1321, 1381, 2355, 2740, 3351
VpaK11BI GGWCC 4 cut(s) 454, 1648, 1778, 3587
XceI RCATGY 3 cut(s) 1373, 2083, 3750
XcmI CCANNNNNNNNNTGG 2 cut(s) 717, 3819
XmnI GAANNNNTTC 2 cut(s) 1224, 1745
XspI CTAG 4 cut(s) 372, 3122, 3446, 3959
ZraI GACGTC 1 cut(s) 2731
ZrmI AGTACT 2 cut(s) 1224, 2547
Zsp2I ATGCAT 6 cut(s) 977, 1972, 2249, 2259, 2990, 3409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.