Rw7G023260

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000085
Physical Location & Seq
Forward (+)
27864133 .. 27867835
3703 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G023260.1

Sequence Viewer

Length: 1971 bp
ATGAAAGGCTATGACATCCGAATAGAAGACTTGTTCAAGTATGGGATCGGGACAGGATTGTTTAAAGATGCTAATACAATCCAAAAAGCCAGACGAGATGCTGGTTTGGTGGTCAAGAACCTTATACGTTCTAGCTTGCTTTTGGATAGTGAATATGATGGATGTGTTAGGATGCATGATGTCATCCGGGATACAGCCATTCAAATTACAAAATCTGAAAATGAGGACGGATTTCTGGTAGAAGCTGGCTGTGGTTTGACGAATGGACCATGTCAATTGGGTGAAGGACACACTGCAATTTCACTCATGAAGAACGCCATTCACGAGCTACCTGAAGAGCTGGTATGTCCGAAACTCCAAATTTTATTGCTACAAGAGAATGATGATTTAGATCAGATCCCTGATACTTTTTTCGAAAATACTAGTTCACTAAGAGTCGTAGATCTTAGTTACACTAGTATATCATCCCTATCCAAGTCATTTATTCACCTAAGAAATCTCGAAGGTCTGTATTTAGATTTTTGCCACAGTATATCTGACCTTTCAATACTGAAAAATCTTAAGATGCTTAAGATTCTTAGTATGAAAGAATACCCTCTAAAGGAATTGTCAACAGAAATAGGAAATTTGACCAATTTAAGGGTGTTGGATGTTAGTGGCAAGGGTTCAGTGGGTGAAGGTATTGTCAGTATTCCATCCGGGGTGATATCAAAATTGCGTAAATTAGAAGAACTGTGCCTGCACTGTGGATTTTGGGACTGGGGGAGTAAAGTTGAGGGAGAAGGAGAAACAACTAATGCTAGCTTTGATGAGGGGTTAGGGTCAATCCGAGTTGGACTTGCTTTGATATATGTATTGGTAGAGACAGGAACGTACACCAGAAATATTATCAGAGAATTGCGCCATCAATACTGGCATGATGGTCCTATATATTCACGATCTTTGGTTCTCGATACAACCATTAGTATGTTACCAGCTTGGTTTTTCAAAGTGGTGACAGAGAATATAGAGAAGCTAGTGTATGTGAATTTCACAGAGTTAAATAACTTCTTCATGGAATATCACCATGGGAGGTTACACAGTCTGAAGCATCTCTCTGTTATTAGTCCCAATGAGAGCTTGAAAGCATTGATCCTTGTGGATGTAAGAAGAAGGAATCAAAATGAAGCTGTGTTCGAGAAATTGGAAGAGTTGCATCTGGAGAGTATGGATTGCTTGGAGGAGTTATGTTATGGTGAATTACCATCTAGGTCTCTCTGGAATCTGAAGGTATTGAAGGTACGTGATTGTCCTAACTTGGGAACTGTCCTGTTACCATCACAATTGTTACAGAGACTTTCAAATCTGAAGAACCTATCTTGTAAGCGTCTGCCTGGAATGGAATATGTGTTTGGATGTGAAGGATTCGAGATAGAACAATCAAAACTGAGAAGGATGGAGTTGTTTGAATTAGATGCAGTAAAGAGCATATGTAATGGTCCTGCTCCACGTGCAATGTTCCACGAACTTACAAGTTTGTACATTTACCATTGCAGCTTTCAAGGAGGTCTCTTCACATTTGATGTAGCTCAATGCCTTTCTCAACTGGAAAACATTTTTTTAGAGAGTTGCCATAATTTGGAGAGAGTAATCGAGGCAAGCAAATCGGAGCTCACATCTGCTTATGACTTTGGGAGCAATTACCAAGTCATACTCAACGATCCAGGGCGTTACGTATATCAGCAAACCAAGACGCCCGGATTGCTGGAGTTGATAACAGGAATGACGACAAAGGCGGAGAACACGCCTATAGCGATGATTGTTCCTGAAGTGACGAATCATACGCCTGATATGACAGATCTGATGGCTATATTGATGGAGGATAAGAAATTGGCAGGAATCATGAAGAACTGCTTGTCTGAATCGGATGGGAATTCGCCTTTTGAGATGATGGAACCGCTGGAGAATATGCCTGAGGATATGAGTCACTAG

Protein Analysis

656

Amino Acids

74.11

Weight (kDa)

5.14

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 117 - 176 9.5e-11 Leucine rich repeat
LRR_14 PF23598 129 - 251 1.5e-11 Leucine-rich repeat region
LRR_RPS2 PF23247 395 - 537 1e-20 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1618
AciI CCGC 2 cut(s) 1775, 1937
AclWI GGATC 4 cut(s) 53, 391, 1126, 1694
AcsI RAATTY 4 cut(s) 360, 625, 1027, 1912
AcuI CTGAAG 5 cut(s) 354, 1106, 1286, 1367, 1827
AcvI CACGTG 1 cut(s) 1490
AcyI GRCGYC 1 cut(s) 1733
AfaI GTAC 3 cut(s) 875, 1281, 1520
AfiI CCNNNNNNNGG 4 cut(s) 601, 639, 1298, 1618
AflII CTTAAG 2 cut(s) 560, 569
AgsI TTSAA 9 cut(s) 37, 203, 546, 988, 1123, 1276, 1341, 1448, 1541
AhlI ACTAGT 2 cut(s) 422, 455
AjnI CCWGG 2 cut(s) 1372, 1702
AjuI GAANNNNNNNTTGG 2 cut(s) 1374, 1406
Alw21I GWGCWC 1 cut(s) 1653
Alw26I GTCTC 4 cut(s) 857, 1257, 1327, 1553
AlwI GGATC 4 cut(s) 53, 391, 1126, 1694
ApeKI GCWGC 1 cut(s) 1533
ApoI RAATTY 4 cut(s) 360, 625, 1027, 1912
AspLEI GCGC 1 cut(s) 903
AspS9I GGNCC 3 cut(s) 266, 923, 1478
AsuC2I CCSGG 3 cut(s) 188, 700, 1737
AsuHPI GGTGA 7 cut(s) 293, 479, 686, 715, 1006, 1055, 1247
AsuII TTCGAA 1 cut(s) 414
AsuNHI GCTAGC 1 cut(s) 800
AvaII GGWCC 3 cut(s) 266, 923, 1478
AxyI CCTNAGG 1 cut(s) 1953
BanII GRGCYC 1 cut(s) 1653
BauI CACGAG 1 cut(s) 323
BbrPI CACGTG 1 cut(s) 1490
BbsI GAAGAC 1 cut(s) 33
Bbv12I GWGCWC 1 cut(s) 1653
BbvI GCAGC 1 cut(s) 1545
BcgI CGANNNNNNTGC 2 cut(s) 1626, 1660
BciT130I CCWGG 2 cut(s) 1374, 1704
BciVI GTATCC 1 cut(s) 184
BcnI CCSGG 3 cut(s) 188, 700, 1737
BcoDI GTCTC 4 cut(s) 857, 1257, 1327, 1553
BcuI ACTAGT 2 cut(s) 422, 455
BfaI CTAG 7 cut(s) 132, 423, 456, 801, 1016, 1248, 1969
BfmI CTRYAG 1 cut(s) 1788
BfrI CTTAAG 2 cut(s) 560, 569
BfuI GTATCC 1 cut(s) 184
BglII AGATCT 2 cut(s) 442, 1837
BisI GCNGC 1 cut(s) 1534
BlsI GCNGC 1 cut(s) 1535
Bme1390I CCNGG 5 cut(s) 188, 700, 1374, 1704, 1737
Bme18I GGWCC 3 cut(s) 266, 923, 1478
BmgT120I GGNCC 3 cut(s) 266, 923, 1478
BmiI GGNNCC 1 cut(s) 1935
BmrFI CCNGG 5 cut(s) 188, 700, 1374, 1704, 1737
BmrI ACTGGG 1 cut(s) 769
BmsI GCATC 7 cut(s) 58, 88, 162, 555, 1099, 1204, 1444
BmtI GCTAGC 1 cut(s) 804
BmuI ACTGGG 1 cut(s) 769
BpiI GAAGAC 1 cut(s) 33
BpmI CTGGAG 3 cut(s) 1220, 1766, 1961
Bpu14I TTCGAA 1 cut(s) 414
BpuMI CCSGG 3 cut(s) 188, 700, 1737
BsaAI YACGTR 3 cut(s) 1283, 1490, 1714
BsaBI GATNNNNATC 1 cut(s) 390
BsaHI GRCGYC 1 cut(s) 1733
BsaI GGTCTC 2 cut(s) 1257, 1553
BsaJI CCNNGG 3 cut(s) 699, 1066, 1703
Bsc4I CCNNNNNNNGG 4 cut(s) 601, 639, 1298, 1618
Bse1I ACTGG 3 cut(s) 764, 917, 1590
Bse21I CCTNAGG 1 cut(s) 1953
Bse3DI GCAATG 2 cut(s) 1500, 1528
Bse8I GATNNNNATC 1 cut(s) 390
BseBI CCWGG 2 cut(s) 1374, 1704
BseDI CCNNGG 3 cut(s) 699, 1066, 1703
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 601, 639, 1298, 1618
BseMI GCAATG 2 cut(s) 1500, 1528
BseMII CTCAG 2 cut(s) 1418, 1944
BseNI ACTGG 3 cut(s) 764, 917, 1590
BseRI GAGGAG 1 cut(s) 1235
BseXI GCAGC 1 cut(s) 1545
BsgI GTGCAG 1 cut(s) 725
BsiHKAI GWGCWC 1 cut(s) 1653
BsiSI CCGG 3 cut(s) 187, 699, 1737
BslFI GGGAC 3 cut(s) 64, 770, 1092
BslI CCNNNNNNNGG 4 cut(s) 601, 639, 1298, 1618
BsmAI GTCTC 4 cut(s) 857, 1257, 1327, 1553
BsmFI GGGAC 3 cut(s) 64, 770, 1092
Bso31I GGTCTC 2 cut(s) 1257, 1553
Bsp119I TTCGAA 1 cut(s) 414
Bsp1286I GDGCHC 1 cut(s) 1653
Bsp1407I TGTACA 1 cut(s) 1518
Bsp143I GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
Bsp19I CCATGG 1 cut(s) 1066
BspACI CCGC 2 cut(s) 1775, 1937
BspCNI CTCAG 2 cut(s) 1419, 1945
BspHI TCATGA 2 cut(s) 306, 1881
BspLI GGNNCC 1 cut(s) 1935
BspOI GCTAGC 1 cut(s) 804
BspPI GGATC 4 cut(s) 53, 391, 1126, 1694
BspQI GCTCTTC 1 cut(s) 330
BspT104I TTCGAA 1 cut(s) 414
BspTI CTTAAG 2 cut(s) 560, 569
BspTNI GGTCTC 2 cut(s) 1257, 1553
BsrDI GCAATG 2 cut(s) 1500, 1528
BsrGI TGTACA 1 cut(s) 1518
BsrI ACTGG 3 cut(s) 764, 917, 1590
BssECI CCNNGG 3 cut(s) 699, 1066, 1703
BssMI GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
BssNI GRCGYC 1 cut(s) 1733
BssSI CACGAG 1 cut(s) 323
BssT1I CCWWGG 1 cut(s) 1066
Bst2BI CACGAG 1 cut(s) 323
Bst2UI CCWGG 2 cut(s) 1374, 1704
Bst4CI ACNGT 5 cut(s) 530, 735, 746, 1082, 1306
Bst6I CTCTTC 3 cut(s) 330, 1182, 1556
BstACI GRCGYC 1 cut(s) 1733
BstAFI CTTAAG 2 cut(s) 560, 569
BstAUI TGTACA 1 cut(s) 1518
BstBAI YACGTR 3 cut(s) 1283, 1490, 1714
BstBI TTCGAA 1 cut(s) 414
BstC8I GCNNGC 5 cut(s) 137, 247, 740, 802, 1639
BstDEI CTNAG 6 cut(s) 431, 446, 491, 578, 1427, 1953
BstDSI CCRYGG 1 cut(s) 1066
BstHHI GCGC 1 cut(s) 903
BstKTI GATC 8 cut(s) 48, 394, 399, 445, 941, 1134, 1702, 1840
BstMAI GTCTC 4 cut(s) 857, 1257, 1327, 1553
BstMBI GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
BstMWI GCNNNNNNNGC 2 cut(s) 1490, 1741
BstNI CCWGG 2 cut(s) 1374, 1704
BstSCI CCNGG 5 cut(s) 186, 698, 1372, 1702, 1735
BstSFI CTRYAG 1 cut(s) 1788
BstSNI TACGTA 1 cut(s) 1714
BstV1I GCAGC 1 cut(s) 1545
BstV2I GAAGAC 1 cut(s) 33
BstX2I RGATCY 3 cut(s) 396, 442, 1837
BstYI RGATCY 3 cut(s) 396, 442, 1837
Bsu36I CCTNAGG 1 cut(s) 1953
BsuI GTATCC 1 cut(s) 184
BtgI CCRYGG 1 cut(s) 1066
BtgZI GCGATG 1 cut(s) 1808
BtsI GCAGTG 1 cut(s) 291
BtsIMutI CAGTG 3 cut(s) 291, 675, 742
Cac8I GCNNGC 5 cut(s) 137, 247, 740, 802, 1639
CciI TCATGA 2 cut(s) 306, 1881
CfoI GCGC 1 cut(s) 903
Cfr13I GGNCC 3 cut(s) 266, 923, 1478
CseI GACGC 2 cut(s) 1355, 1741
Csp6I GTAC 3 cut(s) 874, 1280, 1519
CviAII CATG 7 cut(s) 176, 270, 307, 917, 1054, 1067, 1882
CviQI GTAC 3 cut(s) 874, 1280, 1519
DdeI CTNAG 6 cut(s) 431, 446, 491, 578, 1427, 1953
DpnI GATC 8 cut(s) 47, 393, 398, 444, 940, 1133, 1701, 1839
DpnII GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
DraI TTTAAA 1 cut(s) 64
Eam1104I CTCTTC 3 cut(s) 330, 1182, 1556
EarI CTCTTC 3 cut(s) 330, 1182, 1556
EciI GGCGGA 1 cut(s) 1790
Ecl136II GAGCTC 1 cut(s) 1651
Eco105I TACGTA 1 cut(s) 1714
Eco130I CCWWGG 1 cut(s) 1066
Eco24I GRGCYC 1 cut(s) 1653
Eco31I GGTCTC 2 cut(s) 1257, 1553
Eco32I GATATC 1 cut(s) 708
Eco47I GGWCC 3 cut(s) 266, 923, 1478
Eco53kI GAGCTC 1 cut(s) 1651
Eco57I CTGAAG 5 cut(s) 354, 1106, 1286, 1367, 1827
Eco72I CACGTG 1 cut(s) 1490
Eco81I CCTNAGG 1 cut(s) 1953
EcoICRI GAGCTC 1 cut(s) 1651
EcoRI GAATTC 1 cut(s) 1912
EcoRII CCWGG 2 cut(s) 1372, 1702
EcoRV GATATC 1 cut(s) 708
EcoT14I CCWWGG 1 cut(s) 1066
EcoT22I ATGCAT 1 cut(s) 177
EcoT38I GRGCYC 1 cut(s) 1653
ErhI CCWWGG 1 cut(s) 1066
FaeI CATG 7 cut(s) 179, 273, 310, 920, 1057, 1070, 1885
FalI AAGNNNNNCTT 2 cut(s) 1877, 1909
FaqI GGGAC 3 cut(s) 64, 770, 1092
FatI CATG 7 cut(s) 175, 269, 306, 916, 1053, 1066, 1881
FauNDI CATATG 1 cut(s) 1469
Fnu4HI GCNGC 1 cut(s) 1534
FriOI GRGCYC 1 cut(s) 1653
Fsp4HI GCNGC 1 cut(s) 1534
FspBI CTAG 7 cut(s) 132, 423, 456, 801, 1016, 1248, 1969
GlaI GCGC 1 cut(s) 902
GluI GCNGC 1 cut(s) 1534
GsuI CTGGAG 3 cut(s) 1220, 1766, 1961
HapII CCGG 3 cut(s) 187, 699, 1737
HgaI GACGC 2 cut(s) 1355, 1741
HhaI GCGC 1 cut(s) 903
Hin1I GRCGYC 1 cut(s) 1733
Hin1II CATG 7 cut(s) 179, 273, 310, 920, 1057, 1070, 1885
Hin6I GCGC 1 cut(s) 901
HinP1I GCGC 1 cut(s) 901
HincII GTYRAC 1 cut(s) 612
HindII GTYRAC 1 cut(s) 612
HinfI GANTC 9 cut(s) 435, 574, 1156, 1261, 1404, 1816, 1878, 1901, 1963
HpaII CCGG 3 cut(s) 187, 699, 1737
HphI GGTGA 7 cut(s) 293, 479, 686, 715, 1006, 1055, 1247
Hpy166II GTNNAC 3 cut(s) 428, 612, 876
Hpy8I GTNNAC 3 cut(s) 428, 612, 876
HpyAV CCTTC 9 cut(s) 278, 497, 671, 776, 1146, 1261, 1270, 1394, 1425
HpyCH4III ACNGT 5 cut(s) 530, 735, 746, 1082, 1306
HpyCH4IV ACGT 5 cut(s) 127, 872, 1282, 1489, 1713
HpyCH4V TGCA 7 cut(s) 175, 296, 742, 1195, 1457, 1493, 1533
HpyF10VI GCNNNNNNNGC 2 cut(s) 1490, 1741
HpyF3I CTNAG 6 cut(s) 431, 446, 491, 578, 1427, 1953
HpySE526I ACGT 5 cut(s) 127, 872, 1282, 1489, 1713
Hsp92I GRCGYC 1 cut(s) 1733
Hsp92II CATG 7 cut(s) 179, 273, 310, 920, 1057, 1070, 1885
HspAI GCGC 1 cut(s) 901
Kzo9I GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 3 cut(s) 1489, 1648, 1674
Lsp1109I GCAGC 1 cut(s) 1545
LweI GCATC 7 cut(s) 58, 88, 162, 555, 1099, 1204, 1444
MaeI CTAG 7 cut(s) 132, 423, 456, 801, 1016, 1248, 1969
MaeII ACGT 5 cut(s) 127, 872, 1282, 1489, 1713
MaeIII GTNAC 9 cut(s) 449, 969, 994, 1074, 1311, 1326, 1709, 1810, 1964
MalI GATC 8 cut(s) 47, 393, 398, 444, 940, 1133, 1701, 1839
MboI GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
MfeI CAATTG 2 cut(s) 275, 1322
MflI RGATCY 3 cut(s) 396, 442, 1837
MhlI GDGCHC 1 cut(s) 1653
MlyI GAGTC 1 cut(s) 444
MmeI TCCRAC 2 cut(s) 627, 814
Mph1103I ATGCAT 1 cut(s) 177
MseI TTAA 5 cut(s) 63, 561, 570, 638, 1040
MslI CAYNNNNRTG 1 cut(s) 965
MspA1I CMGCKG 1 cut(s) 1939
MspCI CTTAAG 2 cut(s) 560, 569
MspI CCGG 3 cut(s) 187, 699, 1737
MspR9I CCNGG 5 cut(s) 188, 700, 1374, 1704, 1737
MunI CAATTG 2 cut(s) 275, 1322
MvaI CCWGG 2 cut(s) 1374, 1704
MwoI GCNNNNNNNGC 2 cut(s) 1490, 1741
NciI CCSGG 3 cut(s) 188, 700, 1737
NcoI CCATGG 1 cut(s) 1066
NdeI CATATG 1 cut(s) 1469
NdeII GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
NheI GCTAGC 1 cut(s) 800
NlaIII CATG 7 cut(s) 179, 273, 310, 920, 1057, 1070, 1885
NlaIV GGNNCC 1 cut(s) 1935
NmuCI GTSAC 3 cut(s) 994, 1810, 1964
NsiI ATGCAT 1 cut(s) 177
NspV TTCGAA 1 cut(s) 414
PagI TCATGA 2 cut(s) 306, 1881
PciSI GCTCTTC 1 cut(s) 330
PcsI WCGNNNNNNNCGW 2 cut(s) 321, 1790
PfeI GAWTC 7 cut(s) 574, 1156, 1261, 1404, 1816, 1878, 1901
PflFI GACNNNGTC 1 cut(s) 270
PflMI CCANNNNNTGG 1 cut(s) 1618
PfoI TCCNGGA 1 cut(s) 186
PkrI GCNGC 1 cut(s) 1535
PleI GAGTC 1 cut(s) 443
PmaCI CACGTG 1 cut(s) 1490
PmlI CACGTG 1 cut(s) 1490
PpsI GAGTC 1 cut(s) 443
Ppu21I YACGTR 3 cut(s) 1283, 1490, 1714
Psp124BI GAGCTC 1 cut(s) 1653
Psp6I CCWGG 2 cut(s) 1372, 1702
PspCI CACGTG 1 cut(s) 1490
PspGI CCWGG 2 cut(s) 1372, 1702
PspN4I GGNNCC 1 cut(s) 1935
PspPI GGNCC 3 cut(s) 266, 923, 1478
PsuI RGATCY 3 cut(s) 396, 442, 1837
PsyI GACNNNGTC 1 cut(s) 270
RsaI GTAC 3 cut(s) 875, 1281, 1520
RsaNI GTAC 3 cut(s) 874, 1280, 1519
RseI CAYNNNNRTG 1 cut(s) 965
SacI GAGCTC 1 cut(s) 1653
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 5 cut(s) 63, 561, 570, 638, 1040
SatI GCNGC 1 cut(s) 1534
Sau3AI GATC 8 cut(s) 45, 391, 396, 442, 938, 1131, 1699, 1837
Sau96I GGNCC 3 cut(s) 266, 923, 1478
SchI GAGTC 1 cut(s) 444
ScrFI CCNGG 5 cut(s) 188, 700, 1374, 1704, 1737
SduI GDGCHC 1 cut(s) 1653
SfaNI GCATC 7 cut(s) 58, 88, 162, 555, 1099, 1204, 1444
SfcI CTRYAG 1 cut(s) 1788
SfuI TTCGAA 1 cut(s) 414
SinI GGWCC 3 cut(s) 266, 923, 1478
SmiMI CAYNNNNRTG 1 cut(s) 965
SmlI CTYRAG 2 cut(s) 560, 569
SmoI CTYRAG 2 cut(s) 560, 569
SnaBI TACGTA 1 cut(s) 1714
SpeI ACTAGT 2 cut(s) 422, 455
SsiI CCGC 2 cut(s) 1775, 1937
SspI AATATT 1 cut(s) 886
SspMI CTAG 7 cut(s) 132, 423, 456, 801, 1016, 1248, 1969
SstI GAGCTC 1 cut(s) 1653
StyD4I CCNGG 5 cut(s) 186, 698, 1372, 1702, 1735
StyI CCWWGG 1 cut(s) 1066
TaaI ACNGT 5 cut(s) 530, 735, 746, 1082, 1306
TaiI ACGT 5 cut(s) 130, 875, 1285, 1492, 1716
TaqI TCGA 6 cut(s) 414, 501, 951, 1176, 1407, 1632
TatI WGTACW 1 cut(s) 1518
TfiI GAWTC 7 cut(s) 574, 1156, 1261, 1404, 1816, 1878, 1901
Tru1I TTAA 5 cut(s) 63, 561, 570, 638, 1040
Tru9I TTAA 5 cut(s) 63, 561, 570, 638, 1040
TscAI CASTG 3 cut(s) 298, 675, 749
TseFI GTSAC 3 cut(s) 994, 1810, 1964
TseI GCWGC 1 cut(s) 1533
Tsp45I GTSAC 3 cut(s) 994, 1810, 1964
TspDTI ATGAA 6 cut(s) 17, 323, 599, 1042, 1179, 1898
TspGWI ACGGA 1 cut(s) 243
TspRI CASTG 3 cut(s) 298, 675, 749
Tth111I GACNNNGTC 1 cut(s) 270
Van91I CCANNNNNTGG 1 cut(s) 1618
Vha464I CTTAAG 2 cut(s) 560, 569
VpaK11BI GGWCC 3 cut(s) 266, 923, 1478
XapI RAATTY 4 cut(s) 360, 625, 1027, 1912
XspI CTAG 7 cut(s) 132, 423, 456, 801, 1016, 1248, 1969
Zsp2I ATGCAT 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.