Rmu_sc0005834.1_g000002

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005834.1
OG0000085
Physical Location & Seq
Forward (+)
4310 .. 11397
7088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005834.1_g000002.1.cds

Sequence Viewer

Length: 2742 bp
atggccctgcttagagcctcagctgaaccggcttctcctcgtcggtggaagcatgatgtgtttttaagtttcaggggtgaagacacccgcaagggcattgtttcccatttatacgatgagctgcataacaggagagggattaaaacattcaaggatgatcagcagcttgaaatagggacagctatttctccaagtctcctaacggcaatccaagaatcatggtttgccatcatcgttctctcgccaaattatgcttcttcttcttggtgtttggatgaacttacactcatttttcaatgcatggaagacaagaacagaattctgcctcttttttatcacgttgatccctctgatgtacgccatcaaaggggaagttttcaagtagccttcactaaacatgaacaacagtctaggcaagacatggacaaggtcaagcagtggagagatgctttaaataaagttgcctatctctgtggctgggatgccaagaattatgtatccgaaagagagcttgtcaaaagcattgtgacatttgtgtgcagcaaagtacttcaagtttcacgacctattgaaatcgagtgtataatgcatactggagattttgaggcatttgaagcaaccagacaagctatggataaggtcgtgtcggcacttaaagatgataacatcactgtcattggcataaacggaatgggaggtgttggcaaaacaaccatggttacatatgtcagttcacaagccaaaagagacgggatcttcgatcatgtgattatggcttgtatatctgaaaaccctgacttgatcaaaattcaaggcatattagcagatatgttgggaatgcaattgaaagaggagacagaaattggaagagctggtagattgaaggatagaataatgagaggaaataggattcttataatcttggacgacatgtggaagaatataaatttatcaagcataggaattcccagctacaatgagcttagaaagtgtaattctaaactcttgctcaccacaaggagattatctgtttgtcatgtcatgaggagccaagcaatcatccctcttaacatcctatcaaaagaagattcttggagcttgtttgtaaaggaagcaggacattcttttcatgaatccaccagattttatgatatagcgaggaaggtagctagagaatgtgctggtctcccaattgcattgataacagttgccagggcactgcaatataaagacatggaagaatgggaagaagcagctcgacgactagggatgtctcaacctgtcagccttgatgatgagggagatgttttcaaatgtataaagttgagctatgattacttgaaaagtgatcttgccaagtcatgcttcttgctttgctgtctattcccagaagactatgacatccgcattgaagacttgcttaaatatgggatcagtcatggtttatttcaagattccaacaccatgaatgaagccagagccagaatccattcggtgatcaagtaccttaaagcatcaaacttgcttttagacagtgaaatagatggatgtgtaaggatgcatgatgtcattcgggatatggccatatcaactacattatccgagaacaacaatgggtttttggtgaaagctggtttacacaacctttccgaagagttgaaaaggtctcgagttgaggagcgatgggagcgtttagtcggtgcagtattatgttggaaaagaaaggaatcaacttttgaaaacgggagccatggtattggcattgatgcaagcgttcaatctccatggcttgctaattgggaagttcaggaaatcctgaaagttgctgatgaaatccaacataatgatcccattgtcagtagaatcttatgcgagcacagttataaattggcacatttgaattctaatagcgaccgaaggggagtattacaactcaagattggattgatgacttgcttcaagcaaaagcaagcacggaggggaggtgaaactgtggatagaagccaagattttcttgtcttacagaagttctataaactttatagagagaagaataatgtagaaaagctgcgggaggaagaaatgaagttgagggaatctggatctatctgtgcaaatctgggggagttggagagaaaaacaattataaggaaaagagtttctgcaactctaagaattctggagacagttttggagcagctggaggaaactcccgaagagaaaacgtctcaaattgaggagcatggtacttgcgatattggaaaaacatctcaagttgaggagcgatgggagcgtatagtccatgcagtactaaaacgtgaaaggctgggaactgatgcatacaggtggcatggtacaggcattgttggaaaagttcgatcttcatttgcaattagcagggttataaataaaattttggaagctgcagatgaaatcgaagatgaaaatcttattgcctctagaatcttatgtgagcagggttattcgttggctctagatctggattgtgatagtgaaggaaacggagtattgcagtttaaggctggtctgatgagtgtcattaagcaagcgctatcaaagaggagaagtgcaaccgcaaccatagatagaagtgaagactttgttctattacaacagttctataaactttatagggagaagaataatgtcgaaaagctgctgcaggaaaaaatgaagatgagggagtgtagtacttcttccagtgataaccttagagagtaa

Protein Analysis

913

Amino Acids

104.42

Weight (kDa)

6.77

Isoelectric Point (pI)

55.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 917, 1884, 2147, 2405
AciI CCGC 4 cut(s) 88, 1405, 2071, 2595
AclWI GGATC 5 cut(s) 338, 761, 1439, 1841, 2110
AcoI YGGCCR 1 cut(s) 1581
AcsI RAATTY 7 cut(s) 318, 807, 946, 963, 1900, 2175, 2412
AfaI GTAC 7 cut(s) 357, 549, 1505, 2248, 2310, 2356, 2713
AfeI AGCGCT 1 cut(s) 2571
AfiI CCNNNNNNNGG 1 cut(s) 367
AflIII ACRYGT 1 cut(s) 930
AjnI CCWGG 1 cut(s) 1211
AjuI GAANNNNNNNTTGG 4 cut(s) 238, 270, 1349, 1381
Alw21I GWGCWC 1 cut(s) 1878
Alw26I GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2177, 2232
AlwI GGATC 5 cut(s) 338, 761, 1439, 1841, 2110
Ama87I CYCGRG 1 cut(s) 1668
Aor51HI AGCGCT 1 cut(s) 2571
AoxI GGCC 2 cut(s) 3, 1581
ApeKI GCWGC 9 cut(s) 121, 163, 540, 1253, 2068, 2197, 2423, 2677, 2680
ApoI RAATTY 7 cut(s) 318, 807, 946, 963, 1900, 2175, 2412
ArsI GACNNNNNNTTYG 2 cut(s) 740, 772
Asp700I GAANNNNTTC 1 cut(s) 1489
AspLEI GCGC 1 cut(s) 2572
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 5 cut(s) 89, 1003, 1507, 1636, 1997
AvaI CYCGRG 1 cut(s) 1668
BaeGI GKGCMC 1 cut(s) 1219
BalI TGGCCA 1 cut(s) 1583
BarI GAAGNNNNNNTAC 2 cut(s) 2701, 2733
BbsI GAAGAC 5 cut(s) 87, 312, 1398, 1419, 2622
Bbv12I GWGCWC 1 cut(s) 1878
BbvCI CCTCAGC 1 cut(s) 19
BbvI GCAGC 9 cut(s) 108, 175, 552, 1265, 2055, 2209, 2410, 2664, 2667
BccI CCATC 5 cut(s) 236, 369, 1538, 1677, 2280
BceAI ACGGC 1 cut(s) 219
BciT130I CCWGG 1 cut(s) 1213
BciVI GTATCC 1 cut(s) 508
BclI TGATCA 3 cut(s) 157, 801, 1497
BcoDI GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2177, 2232
BfaI CTAG 5 cut(s) 411, 1170, 1265, 2460, 2495
BfmI CTRYAG 2 cut(s) 2424, 2681
BfoI RGCGCY 1 cut(s) 2573
BfuI GTATCC 1 cut(s) 508
BglII AGATCT 1 cut(s) 2497
BisI GCNGC 9 cut(s) 122, 164, 541, 1254, 2069, 2198, 2424, 2678, 2681
BlsI GCNGC 9 cut(s) 123, 165, 542, 1255, 2070, 2199, 2425, 2679, 2682
BmcAI AGTACT 3 cut(s) 549, 2310, 2713
Bme1390I CCNGG 1 cut(s) 1213
BmeT110I CYCGRG 1 cut(s) 1668
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 2 cut(s) 1049, 1748
BmrFI CCNGG 1 cut(s) 1213
BmsI GCATC 6 cut(s) 436, 472, 1523, 1548, 1756, 2326
BpiI GAAGAC 5 cut(s) 87, 312, 1398, 1419, 2622
BpmI CTGGAG 3 cut(s) 615, 2201, 2222
Bpu10I CCTNAGC 1 cut(s) 19
BpuEI CTTGAG 2 cut(s) 1919, 2256
BsaBI GATNNNNATC 1 cut(s) 2445
BsaI GGTCTC 2 cut(s) 1190, 1671
BsaJI CCNNGG 4 cut(s) 714, 1212, 1750, 1784
BsaXI ACNNNNNCTCC 4 cut(s) 1738, 1768, 1969, 1999
Bsc4I CCNNNNNNNGG 1 cut(s) 367
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 2 cut(s) 598, 2721
Bse8I GATNNNNATC 1 cut(s) 2445
BseBI CCWGG 1 cut(s) 1213
BseDI CCNNGG 4 cut(s) 714, 1212, 1750, 1784
BseGI GGATG 9 cut(s) 160, 280, 487, 1059, 1071, 1275, 1401, 1553, 1563
BseJI GATNNNNATC 1 cut(s) 2445
BseLI CCNNNNNNNGG 1 cut(s) 367
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 2 cut(s) 598, 2721
BseRI GAGGAG 7 cut(s) 27, 866, 1060, 1691, 2252, 2294, 2596
BseSI GKGCMC 1 cut(s) 1219
BseXI GCAGC 9 cut(s) 108, 175, 552, 1265, 2055, 2209, 2410, 2664, 2667
BseYI CCCAGC 3 cut(s) 477, 968, 2326
BsgI GTGCAG 2 cut(s) 559, 1722
Bsh1285I CGRYCG 1 cut(s) 1915
BshFI GGCC 2 cut(s) 5, 1583
BsiEI CGRYCG 1 cut(s) 1915
BsiHKAI GWGCWC 1 cut(s) 1878
BsiHKCI CYCGRG 1 cut(s) 1668
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 1 cut(s) 190
BslI CCNNNNNNNGG 1 cut(s) 367
BsmAI GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2177, 2232
BsmBI CGTCTC 2 cut(s) 741, 2232
BsmFI GGGAC 1 cut(s) 190
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 2 cut(s) 5, 1583
Bso31I GGTCTC 2 cut(s) 1190, 1671
BsoBI CYCGRG 1 cut(s) 1668
Bsp1286I GDGCHC 2 cut(s) 1219, 1878
Bsp19I CCATGG 3 cut(s) 714, 1750, 1784
BspACI CCGC 4 cut(s) 88, 1405, 2071, 2595
BspANI GGCC 2 cut(s) 5, 1583
BspCNI CTCAG 1 cut(s) 32
BspHI TCATGA 2 cut(s) 1041, 1129
BspLI GGNNCC 2 cut(s) 1049, 1748
BspMAI CTGCAG 2 cut(s) 2428, 2685
BspPI GGATC 5 cut(s) 338, 761, 1439, 1841, 2110
BspQI GCTCTTC 1 cut(s) 862
BspTNI GGTCTC 2 cut(s) 1190, 1671
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 2 cut(s) 598, 2721
BssAI RCCGGY 1 cut(s) 28
BssECI CCNNGG 4 cut(s) 714, 1212, 1750, 1784
BssT1I CCWWGG 3 cut(s) 714, 1750, 1784
Bst2UI CCWGG 1 cut(s) 1213
Bst4CI ACNGT 8 cut(s) 408, 673, 1207, 1535, 1880, 1993, 2188, 2637
Bst6I CTCTTC 3 cut(s) 862, 1647, 2211
BstC8I GCNNGC 5 cut(s) 1771, 1791, 1874, 1971, 2568
BstDEI CTNAG 5 cut(s) 11, 19, 983, 2171, 2732
BstDSI CCRYGG 3 cut(s) 714, 1750, 1784
BstF5I GGATG 9 cut(s) 160, 280, 487, 1059, 1071, 1275, 1401, 1553, 1563
BstH2I RGCGCY 1 cut(s) 2573
BstHHI GCGC 1 cut(s) 2572
BstMAI GTCTC 8 cut(s) 200, 741, 848, 1190, 1278, 1671, 2177, 2232
BstMCI CGRYCG 1 cut(s) 1915
BstMWI GCNNNNNNNGC 4 cut(s) 29, 614, 1687, 2290
BstNI CCWGG 1 cut(s) 1213
BstNSI RCATGY 1 cut(s) 934
BstSCI CCNGG 1 cut(s) 1211
BstSFI CTRYAG 2 cut(s) 2424, 2681
BstSLI GKGCMC 1 cut(s) 1219
BstV1I GCAGC 9 cut(s) 108, 175, 552, 1265, 2055, 2209, 2410, 2664, 2667
BstV2I GAAGAC 5 cut(s) 87, 312, 1398, 1419, 2622
BstX2I RGATCY 3 cut(s) 753, 2102, 2497
BstXI CCANNNNNNTGG 1 cut(s) 1757
BstYI RGATCY 3 cut(s) 753, 2102, 2497
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 2 cut(s) 5, 1583
BtgI CCRYGG 3 cut(s) 714, 1750, 1784
BtgZI GCGATG 2 cut(s) 1696, 2299
BtsCI GGATG 9 cut(s) 160, 280, 487, 1059, 1071, 1275, 1401, 1553, 1563
BtsI GCAGTG 2 cut(s) 443, 1217
BtsIMutI CAGTG 5 cut(s) 443, 669, 1217, 1540, 2728
Cac8I GCNNGC 5 cut(s) 1771, 1791, 1874, 1971, 2568
CciI TCATGA 2 cut(s) 1041, 1129
CfoI GCGC 1 cut(s) 2572
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 7 cut(s) 356, 548, 1504, 2247, 2309, 2355, 2712
CviQI GTAC 7 cut(s) 356, 548, 1504, 2247, 2309, 2355, 2712
DdeI CTNAG 5 cut(s) 11, 19, 983, 2171, 2732
DraI TTTAAA 1 cut(s) 453
EaeI YGGCCR 1 cut(s) 1581
Eam1104I CTCTTC 3 cut(s) 862, 1647, 2211
EarI CTCTTC 3 cut(s) 862, 1647, 2211
Eco130I CCWWGG 3 cut(s) 714, 1750, 1784
Eco31I GGTCTC 2 cut(s) 1190, 1671
Eco47III AGCGCT 1 cut(s) 2571
Eco88I CYCGRG 1 cut(s) 1668
EcoRI GAATTC 4 cut(s) 318, 963, 1900, 2175
EcoRII CCWGG 1 cut(s) 1211
EcoT14I CCWWGG 3 cut(s) 714, 1750, 1784
EcoT22I ATGCAT 4 cut(s) 302, 591, 1563, 2341
ErhI CCWWGG 3 cut(s) 714, 1750, 1784
Esp3I CGTCTC 2 cut(s) 741, 2232
FalI AAGNNNNNCTT 6 cut(s) 1349, 1381, 1404, 1436, 1998, 2030
FaqI GGGAC 1 cut(s) 190
FauI CCCGC 2 cut(s) 95, 2064
FauNDI CATATG 1 cut(s) 724
FbaI TGATCA 3 cut(s) 157, 801, 1497
Fnu4HI GCNGC 9 cut(s) 122, 164, 541, 1254, 2069, 2198, 2424, 2678, 2681
FokI GGATG 9 cut(s) 167, 287, 494, 1046, 1058, 1282, 1388, 1560, 1570
Fsp4HI GCNGC 9 cut(s) 122, 164, 541, 1254, 2069, 2198, 2424, 2678, 2681
FspBI CTAG 5 cut(s) 411, 1170, 1265, 2460, 2495
GlaI GCGC 1 cut(s) 2571
GluI GCNGC 9 cut(s) 122, 164, 541, 1254, 2069, 2198, 2424, 2678, 2681
GsaI CCCAGC 3 cut(s) 481, 972, 2330
GsuI CTGGAG 3 cut(s) 615, 2201, 2222
HaeII RGCGCY 1 cut(s) 2573
HaeIII GGCC 2 cut(s) 5, 1583
HapII CCGG 1 cut(s) 29
HhaI GCGC 1 cut(s) 2572
Hin6I GCGC 1 cut(s) 2570
HinP1I GCGC 1 cut(s) 2570
HpaII CCGG 1 cut(s) 29
HphI GGTGA 5 cut(s) 89, 1003, 1507, 1636, 1997
Hpy166II GTNNAC 2 cut(s) 734, 1637
Hpy188I TCNGA 6 cut(s) 352, 502, 787, 1603, 1651, 2550
Hpy8I GTNNAC 2 cut(s) 734, 1637
Hpy99I CGWCG 2 cut(s) 45, 1263
HpyAV CCTTC 5 cut(s) 397, 877, 1156, 1911, 2510
HpyCH4III ACNGT 8 cut(s) 408, 673, 1207, 1535, 1880, 1993, 2188, 2637
HpyCH4IV ACGT 3 cut(s) 339, 2225, 2317
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 614, 1687, 2290
HpyF3I CTNAG 5 cut(s) 11, 19, 983, 2171, 2732
HpySE526I ACGT 3 cut(s) 339, 2225, 2317
HspAI GCGC 1 cut(s) 2570
Ksp22I TGATCA 3 cut(s) 157, 801, 1497
LguI GCTCTTC 1 cut(s) 862
LmnI GCTCC 9 cut(s) 1047, 1095, 1678, 1687, 1746, 2194, 2239, 2281, 2290
Lsp1109I GCAGC 9 cut(s) 108, 175, 552, 1265, 2055, 2209, 2410, 2664, 2667
LweI GCATC 6 cut(s) 436, 472, 1523, 1548, 1756, 2326
MaeI CTAG 5 cut(s) 411, 1170, 1265, 2460, 2495
MaeII ACGT 3 cut(s) 339, 2225, 2317
MaeIII GTNAC 2 cut(s) 526, 718
MfeI CAATTG 2 cut(s) 842, 1191
MflI RGATCY 3 cut(s) 753, 2102, 2497
MhlI GDGCHC 2 cut(s) 1219, 1878
MlsI TGGCCA 1 cut(s) 1583
MluNI TGGCCA 1 cut(s) 1583
MmeI TCCRAC 5 cut(s) 1482, 1694, 1861, 2109, 2347
Mox20I TGGCCA 1 cut(s) 1583
Mph1103I ATGCAT 4 cut(s) 302, 591, 1563, 2341
MroXI GAANNNNTTC 1 cut(s) 1489
MscI TGGCCA 1 cut(s) 1583
MseI TTAA 9 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2538, 2562
MslI CAYNNNNRTG 2 cut(s) 535, 2344
Msp20I TGGCCA 1 cut(s) 1583
MspA1I CMGCKG 2 cut(s) 23, 2200
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 1 cut(s) 1213
MunI CAATTG 2 cut(s) 842, 1191
Mva1269I GAATGC 1 cut(s) 843
MvaI CCWGG 1 cut(s) 1213
MwoI GCNNNNNNNGC 4 cut(s) 29, 614, 1687, 2290
NcoI CCATGG 3 cut(s) 714, 1750, 1784
NdeI CATATG 1 cut(s) 724
NlaIV GGNNCC 2 cut(s) 1049, 1748
NmuCI GTSAC 1 cut(s) 526
NsiI ATGCAT 4 cut(s) 302, 591, 1563, 2341
NspI RCATGY 1 cut(s) 934
PaeR7I CTCGAG 1 cut(s) 1668
PagI TCATGA 2 cut(s) 1041, 1129
PciI ACATGT 1 cut(s) 930
PciSI GCTCTTC 1 cut(s) 862
PcsI WCGNNNNNNNCGW 1 cut(s) 756
PctI GAATGC 1 cut(s) 843
PdmI GAANNNNTTC 1 cut(s) 1489
PflFI GACNNNGTC 1 cut(s) 428
PkrI GCNGC 9 cut(s) 123, 165, 542, 1255, 2070, 2199, 2425, 2679, 2682
PscI ACATGT 1 cut(s) 930
PsiI TTATAA 4 cut(s) 917, 1884, 2147, 2405
Psp6I CCWGG 1 cut(s) 1211
PspFI CCCAGC 3 cut(s) 477, 968, 2326
PspGI CCWGG 1 cut(s) 1211
PspN4I GGNNCC 2 cut(s) 1049, 1748
PspPI GGNCC 1 cut(s) 4
PstI CTGCAG 2 cut(s) 2428, 2685
PsuI RGATCY 3 cut(s) 753, 2102, 2497
PsyI GACNNNGTC 1 cut(s) 428
PvuII CAGCTG 2 cut(s) 23, 2200
RsaI GTAC 7 cut(s) 357, 549, 1505, 2248, 2310, 2356, 2713
RsaNI GTAC 7 cut(s) 356, 548, 1504, 2247, 2309, 2355, 2712
RseI CAYNNNNRTG 2 cut(s) 535, 2344
SapI GCTCTTC 1 cut(s) 862
SaqAI TTAA 9 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2538, 2562
SatI GCNGC 9 cut(s) 122, 164, 541, 1254, 2069, 2198, 2424, 2678, 2681
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 3 cut(s) 549, 2310, 2713
ScrFI CCNGG 1 cut(s) 1213
SduI GDGCHC 2 cut(s) 1219, 1878
SfaNI GCATC 6 cut(s) 436, 472, 1523, 1548, 1756, 2326
SfcI CTRYAG 2 cut(s) 2424, 2681
Sfr274I CTCGAG 1 cut(s) 1668
SlaI CTCGAG 1 cut(s) 1668
SmiMI CAYNNNNRTG 2 cut(s) 535, 2344
SmlI CTYRAG 3 cut(s) 1668, 1934, 2271
SmoI CTYRAG 3 cut(s) 1668, 1934, 2271
SsiI CCGC 4 cut(s) 88, 1405, 2071, 2595
SspMI CTAG 5 cut(s) 411, 1170, 1265, 2460, 2495
StyD4I CCNGG 1 cut(s) 1211
StyI CCWWGG 3 cut(s) 714, 1750, 1784
TaaI ACNGT 8 cut(s) 408, 673, 1207, 1535, 1880, 1993, 2188, 2637
TaiI ACGT 3 cut(s) 342, 2228, 2320
TaqI TCGA 7 cut(s) 576, 759, 1258, 1669, 2377, 2436, 2670
TaqII GACCGA 1 cut(s) 1929
TatI WGTACW 3 cut(s) 547, 2308, 2711
Tru1I TTAA 9 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2538, 2562
Tru9I TTAA 9 cut(s) 65, 141, 452, 654, 1068, 1422, 1509, 2538, 2562
TscAI CASTG 5 cut(s) 443, 676, 1224, 1540, 2728
TseFI GTSAC 1 cut(s) 526
TseI GCWGC 9 cut(s) 121, 163, 540, 1253, 2068, 2197, 2423, 2677, 2680
Tsp45I GTSAC 1 cut(s) 526
TspGWI ACGGA 3 cut(s) 702, 1990, 2538
TspRI CASTG 5 cut(s) 443, 676, 1224, 1540, 2728
Tth111I GACNNNGTC 1 cut(s) 428
XapI RAATTY 7 cut(s) 318, 807, 946, 963, 1900, 2175, 2412
XbaI TCTAGA 2 cut(s) 2459, 2494
XceI RCATGY 1 cut(s) 934
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XhoI CTCGAG 1 cut(s) 1668
XmnI GAANNNNTTC 1 cut(s) 1489
XspI CTAG 5 cut(s) 411, 1170, 1265, 2460, 2495
ZrmI AGTACT 3 cut(s) 549, 2310, 2713
Zsp2I ATGCAT 4 cut(s) 302, 591, 1563, 2341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.