Rmu_sc0002075.1_g000009

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002075.1
OG0000085
Physical Location & Seq
Reverse (-)
46110 .. 48960
2851 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002075.1_g000009.1.cds

Sequence Viewer

Length: 2676 bp
atgcttacttgcagaactgaaagagaacttttggatgccattgaggaatatgtgtgcaataaattacgacctactgaacttgagcttaaaatgtccattggaggttttgaaacatttgaagcaacaaaacaagccattgataaggtcatgaatgcgataaaagacgatgaggttactaccattggggtctatggaatggggggcgttggaaagacgacaatggtgaaatatgttggagcacaagcccaagaaagtaggctttttaataaagtgattatggctgttgtatcccaaaaccccgacttgatgaaaattcaagagacatttgcagaactgctgggctttaaattgggggagaagacagaaattggaagagccagcaaattgacggagaatataatgagaggaactgggatcctaataatcttggatgacatttggaagagaatagacttttcaaggattggaattccgagccacaatgaacttcgaagatgcaattccaaagttctactgaccaccagaaaattgagcgtttgccgctccatggattgccatgcaaacatacatctcaatatcttatcagaagaagattcttggagcttatttttgaaggaagcaaggaagtcttttgacaaatcatccaatttctatgatgtagcacgtaaggtggctagagaatgcgctggtctaccaactgctttgatagcagtttcgagggcccttcgagatgaaggtttggacggatggaaagaagctgctcgacgactaaaagcatctcaacctgccaaccctgaagatgagagagatgtgtttgcatgcataaagttaagctatgattacttgaaatctgattattccaaatcatgtttcttgctttgctgcctgttcccagaagattatgaaatccccattgaatgcttgctcatgtatggaattgggaaaggaatgtttcaagattccaacatgctagaagcccgagacactacatattcagtggtgaaggcccttaaagattctagcttgcttttggacgctagagataacggatgtgtaaggatacatgatgtcattcgggatatggcaatattgatttcattatctgaagacggccagcggttcttggtgaaagttggctatgaattgaaaaattggccaaagattgatgcacataaaggctactctgcaatctcactagctaatgaagaacaaaatttgcaagctacccgaagagttgattattgcgagaacataattgacatttctgtaatcggaaaacttcacaagcttgagattcttagtatgagaagacctgctcagaaagaattgtcacgagaaataggacagttgaccaatctaaagatgctggatgtcagtgctggtagattctcgggtggacgtatttgcacaattccgtctaaagtgatatcaaagttgcataaattagaagaactgtacatgcaatattgtggattttgggactgggggagtaaaattgatggagaaggagaagaaactaatattggctttgatgaattagttggtttatcatatttaagcattttgaaagtttgcatatcagatgcaaattgcatccctagaagtgttgaggtcgaaccgaattgggtttactttgatattagtatttgcagcggcagtgatagagagagagccattatgaatcttccatccggtcataattgtagatacttgagtcttgatagtactgacacaaccataggaacctttccagactggtttgtcaacgctgtggtaaagaatactgagaggctacgttataaagactgcaaagggttaagtaacattctcgtggaatatgaccatgggaggttacatgaactgaaagttctctatgtaaaagttcgctgtgagaacttgaaagaattgatgaatgcaataacttatgttccatatatgcctgtgtttgagaacttggaagagttgtatctggaatacctggatgacctgaagcagttatgtgttggagagttaccacctggatctctctgcagtctgaaattattgatggtccgtgagtgtcctaacttgggaaatatactattgccatcaaaattgtggcagaaactacgaaatttggaaacactaatctgtatgagaagtaaagtggaacatgtgtttgaatgtgaaggatttgagccagatcaaacaaatctgagaaggatgaagttatatgatctagatgtactaagaagcatatgtaatggtcctgctccacgtggaatgttccagactctaaagaaattggtcatttgcaattgcaacatccagggaagtctcttcacatttgatgtagctcagtttctttttcaattggaaacccttacaatatccagatgccctgtcttggaaagagtaatcgaagcaaggagagaaacattgaacaacaagaagaccgttcttccaaaattgaagaacttatgtttgcttcatcttccaatgttgtacaagggaagtgctactattgattttgagtgtccttcattggaaaacttgggtctaaaggggtgcccctacttgtcatttccatcctctgcttctgactacttccacagcaggaaccaagtcctttccaatgatcctcgtcttctgaatcggattcccaaatcggagatacagtatgtcgctgggtcataa

Protein Analysis

891

Amino Acids

101.25

Weight (kDa)

6.43

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1800
AasI GACNNNNNNGTC 1 cut(s) 1760
Acc36I ACCTGC 2 cut(s) 793, 1321
AccB1I GGYRCC 1 cut(s) 2547
AccBSI CCGCTC 1 cut(s) 543
AccI GTMKAC 1 cut(s) 691
AciI CCGC 3 cut(s) 541, 1117, 1653
AclWI GGATC 4 cut(s) 409, 422, 2029, 2612
AcoI YGGCCR 2 cut(s) 1111, 1154
AcsI RAATTY 4 cut(s) 312, 468, 1213, 2113
AcuI CTGAAG 3 cut(s) 816, 1125, 2009
AcvI CACGTG 1 cut(s) 2258
AfaI GTAC 4 cut(s) 1457, 1726, 2226, 2486
AfiI CCNNNNNNNGG 3 cut(s) 547, 2069, 2386
AflIII ACRYGT 1 cut(s) 2152
AjnI CCWGG 3 cut(s) 1977, 2017, 2307
AjuI GAANNNNNNNTTGG 4 cut(s) 854, 886, 1506, 1538
AluBI AGCT 9 cut(s) 85, 603, 758, 834, 1023, 1199, 1223, 1288, 2336
AluI AGCT 9 cut(s) 85, 603, 758, 834, 1023, 1199, 1223, 1288, 2336
Alw21I GWGCWC 1 cut(s) 241
Alw26I GTCTC 3 cut(s) 314, 975, 2321
AlwI GGATC 4 cut(s) 409, 422, 2029, 2612
Ama87I CYCGRG 2 cut(s) 978, 1390
AoxI GGCC 4 cut(s) 720, 1005, 1111, 1154
ApaI GGGCCC 1 cut(s) 724
ApeKI GCWGC 3 cut(s) 758, 882, 1650
ApoI RAATTY 4 cut(s) 312, 468, 1213, 2113
AspLEI GCGC 1 cut(s) 686
AspS9I GGNCC 5 cut(s) 720, 721, 1006, 2050, 2246
AsuHPI GGTGA 3 cut(s) 235, 1012, 1138
AsuII TTCGAA 1 cut(s) 490
AvaI CYCGRG 2 cut(s) 978, 1390
AvaII GGWCC 2 cut(s) 2050, 2246
BaeGI GKGCMC 2 cut(s) 724, 2552
BaeI ACNNNNGTAYC 2 cut(s) 1699, 1732
BalI TGGCCA 1 cut(s) 1156
BamHI GGATCC 1 cut(s) 414
BanI GGYRCC 1 cut(s) 2547
BanII GRGCYC 1 cut(s) 724
BauI CACGAG 2 cut(s) 1332, 1829
BbrPI CACGTG 1 cut(s) 2258
BbsI GAAGAC 5 cut(s) 365, 1113, 1315, 2438, 2618
Bbv12I GWGCWC 1 cut(s) 241
BbvI GCAGC 3 cut(s) 745, 869, 1662
BccI CCATC 6 cut(s) 741, 1493, 1696, 2041, 2095, 2575
BceAI ACGGC 1 cut(s) 1126
BciT130I CCWGG 3 cut(s) 1979, 2019, 2309
BciVI GTATCC 2 cut(s) 298, 1053
BcoDI GTCTC 3 cut(s) 314, 975, 2321
BfaI CTAG 7 cut(s) 675, 971, 1020, 1038, 1196, 1599, 2219
BfmI CTRYAG 1 cut(s) 2029
BfuAI ACCTGC 2 cut(s) 793, 1321
BfuI GTATCC 2 cut(s) 298, 1053
BisI GCNGC 5 cut(s) 541, 759, 883, 1651, 1654
BlsI GCNGC 5 cut(s) 542, 760, 884, 1652, 1655
BmcAI AGTACT 1 cut(s) 1726
Bme1390I CCNGG 3 cut(s) 1979, 2019, 2309
Bme18I GGWCC 2 cut(s) 2050, 2246
BmeT110I CYCGRG 2 cut(s) 978, 1390
BmgT120I GGNCC 5 cut(s) 720, 721, 1006, 2050, 2246
BmiI GGNNCC 5 cut(s) 416, 722, 1744, 2549, 2600
BmrFI CCNGG 3 cut(s) 1979, 2019, 2309
BmrI ACTGGG 2 cut(s) 420, 1492
BmsI GCATC 8 cut(s) 25, 485, 785, 1156, 1353, 1573, 1602, 2366
BmuI ACTGGG 2 cut(s) 420, 1492
BpiI GAAGAC 5 cut(s) 365, 1113, 1315, 2438, 2618
Bpu14I TTCGAA 1 cut(s) 490
BpuEI CTTGAG 3 cut(s) 101, 1310, 1732
BsaAI YACGTR 2 cut(s) 665, 2258
BsaJI CCNNGG 3 cut(s) 546, 1843, 2308
BsaWI WCCGGW 1 cut(s) 1691
BsaXI ACNNNNNCTCC 2 cut(s) 2642, 2672
Bsc4I CCNNNNNNNGG 3 cut(s) 547, 2069, 2386
Bse1I ACTGG 3 cut(s) 415, 1487, 1760
BseBI CCWGG 3 cut(s) 1979, 2019, 2309
BseDI CCNNGG 3 cut(s) 546, 1843, 2308
BseLI CCNNNNNNNGG 3 cut(s) 547, 2069, 2386
BseMII CTCAG 4 cut(s) 1331, 1776, 2186, 2351
BseNI ACTGG 3 cut(s) 415, 1487, 1760
BseSI GKGCMC 2 cut(s) 724, 2552
BseXI GCAGC 3 cut(s) 745, 869, 1662
BseYI CCCAGC 2 cut(s) 337, 2666
BshFI GGCC 4 cut(s) 722, 1007, 1113, 1156
BshNI GGYRCC 1 cut(s) 2547
BsiHKAI GWGCWC 1 cut(s) 241
BsiHKCI CYCGRG 2 cut(s) 978, 1390
BsiSI CCGG 1 cut(s) 1692
BslFI GGGAC 1 cut(s) 1493
BslI CCNNNNNNNGG 3 cut(s) 547, 2069, 2386
BsmAI GTCTC 3 cut(s) 314, 975, 2321
BsmFI GGGAC 1 cut(s) 1493
BsmI GAATGC 4 cut(s) 157, 686, 923, 1918
BsnI GGCC 4 cut(s) 722, 1007, 1113, 1156
BsoBI CYCGRG 2 cut(s) 978, 1390
Bsp119I TTCGAA 1 cut(s) 490
Bsp120I GGGCCC 1 cut(s) 720
Bsp1286I GDGCHC 3 cut(s) 241, 724, 2552
Bsp1407I TGTACA 2 cut(s) 1455, 2484
Bsp143I GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
Bsp19I CCATGG 2 cut(s) 546, 1843
BspACI CCGC 3 cut(s) 541, 1117, 1653
BspANI GGCC 4 cut(s) 722, 1007, 1113, 1156
BspCNI CTCAG 4 cut(s) 1330, 1777, 2187, 2350
BspHI TCATGA 1 cut(s) 147
BspLI GGNNCC 5 cut(s) 416, 722, 1744, 2549, 2600
BspMAI CTGCAG 1 cut(s) 2033
BspMI ACCTGC 2 cut(s) 793, 1321
BspPI GGATC 4 cut(s) 409, 422, 2029, 2612
BspQI GCTCTTC 1 cut(s) 367
BspT104I TTCGAA 1 cut(s) 490
BspT107I GGYRCC 1 cut(s) 2547
BsrBI CCGCTC 1 cut(s) 543
BsrGI TGTACA 2 cut(s) 1455, 2484
BsrI ACTGG 3 cut(s) 415, 1487, 1760
BssECI CCNNGG 3 cut(s) 546, 1843, 2308
BssMI GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
BssSI CACGAG 2 cut(s) 1332, 1829
BssT1I CCWWGG 2 cut(s) 546, 1843
Bst2BI CACGAG 2 cut(s) 1332, 1829
Bst2UI CCWGG 3 cut(s) 1979, 2019, 2309
Bst4CI ACNGT 4 cut(s) 1347, 1455, 2437, 2658
Bst6I CTCTTC 5 cut(s) 367, 437, 1225, 1953, 2324
BstAUI TGTACA 2 cut(s) 1455, 2484
BstBAI YACGTR 2 cut(s) 665, 2258
BstBI TTCGAA 1 cut(s) 490
BstC8I GCNNGC 6 cut(s) 379, 820, 923, 1025, 1115, 1221
BstDEI CTNAG 6 cut(s) 1298, 1317, 1785, 2195, 2228, 2337
BstDSI CCRYGG 2 cut(s) 546, 1843
BstHHI GCGC 1 cut(s) 686
BstKTI GATC 5 cut(s) 417, 2024, 2185, 2218, 2620
BstMAI GTCTC 3 cut(s) 314, 975, 2321
BstMBI GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
BstMWI GCNNNNNNNGC 2 cut(s) 540, 707
BstNI CCWGG 3 cut(s) 1979, 2019, 2309
BstNSI RCATGY 4 cut(s) 822, 970, 1462, 2156
BstSCI CCNGG 3 cut(s) 1977, 2017, 2307
BstSFI CTRYAG 1 cut(s) 2029
BstSLI GKGCMC 2 cut(s) 724, 2552
BstV1I GCAGC 3 cut(s) 745, 869, 1662
BstV2I GAAGAC 5 cut(s) 365, 1113, 1315, 2438, 2618
BstX2I RGATCY 2 cut(s) 414, 2021
BstYI RGATCY 2 cut(s) 414, 2021
BsuI GTATCC 2 cut(s) 298, 1053
BsuRI GGCC 4 cut(s) 722, 1007, 1113, 1156
BtgI CCRYGG 2 cut(s) 546, 1843
BtsI GCAGTG 1 cut(s) 1663
BtsIMutI CAGTG 3 cut(s) 1002, 1381, 1663
BveI ACCTGC 2 cut(s) 793, 1321
Cac8I GCNNGC 6 cut(s) 379, 820, 923, 1025, 1115, 1221
CciI TCATGA 1 cut(s) 147
CfoI GCGC 1 cut(s) 686
Cfr13I GGNCC 5 cut(s) 720, 721, 1006, 2050, 2246
CseI GACGC 1 cut(s) 1043
Csp6I GTAC 4 cut(s) 1456, 1725, 2225, 2485
CviQI GTAC 4 cut(s) 1456, 1725, 2225, 2485
DdeI CTNAG 6 cut(s) 1298, 1317, 1785, 2195, 2228, 2337
DpnI GATC 5 cut(s) 416, 2023, 2184, 2217, 2619
DpnII GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
DraI TTTAAA 1 cut(s) 346
DrdI GACNNNNNNGTC 1 cut(s) 1760
DseDI GACNNNNNNGTC 1 cut(s) 1760
EaeI YGGCCR 2 cut(s) 1111, 1154
Eam1104I CTCTTC 5 cut(s) 367, 437, 1225, 1953, 2324
EarI CTCTTC 5 cut(s) 367, 437, 1225, 1953, 2324
Eco130I CCWWGG 2 cut(s) 546, 1843
Eco24I GRGCYC 1 cut(s) 724
Eco32I GATATC 1 cut(s) 1428
Eco47I GGWCC 2 cut(s) 2050, 2246
Eco57I CTGAAG 3 cut(s) 816, 1125, 2009
Eco72I CACGTG 1 cut(s) 2258
Eco88I CYCGRG 2 cut(s) 978, 1390
EcoO109I RGGNCCY 3 cut(s) 720, 721, 1006
EcoRI GAATTC 1 cut(s) 468
EcoRII CCWGG 3 cut(s) 1977, 2017, 2307
EcoRV GATATC 1 cut(s) 1428
EcoT14I CCWWGG 2 cut(s) 546, 1843
EcoT22I ATGCAT 1 cut(s) 824
EcoT38I GRGCYC 1 cut(s) 724
ErhI CCWWGG 2 cut(s) 546, 1843
FalI AAGNNNNNCTT 2 cut(s) 613, 645
FaqI GGGAC 1 cut(s) 1493
FauNDI CATATG 1 cut(s) 2237
FblI GTMKAC 1 cut(s) 691
Fnu4HI GCNGC 5 cut(s) 541, 759, 883, 1651, 1654
FriOI GRGCYC 1 cut(s) 724
Fsp4HI GCNGC 5 cut(s) 541, 759, 883, 1651, 1654
FspBI CTAG 7 cut(s) 675, 971, 1020, 1038, 1196, 1599, 2219
GlaI GCGC 1 cut(s) 685
GluI GCNGC 5 cut(s) 541, 759, 883, 1651, 1654
GsaI CCCAGC 2 cut(s) 341, 2670
HaeIII GGCC 4 cut(s) 722, 1007, 1113, 1156
HapII CCGG 1 cut(s) 1692
HgaI GACGC 1 cut(s) 1043
HhaI GCGC 1 cut(s) 686
Hin6I GCGC 1 cut(s) 684
HinP1I GCGC 1 cut(s) 684
HincII GTYRAC 2 cut(s) 1350, 1765
HindII GTYRAC 2 cut(s) 1350, 1765
HindIII AAGCTT 1 cut(s) 1286
HpaII CCGG 1 cut(s) 1692
HphI GGTGA 3 cut(s) 235, 1012, 1138
Hpy166II GTNNAC 5 cut(s) 692, 1350, 1397, 1630, 1765
Hpy8I GTNNAC 5 cut(s) 692, 1350, 1397, 1630, 1765
Hpy99I CGWCG 1 cut(s) 768
HpyAV CCTTC 8 cut(s) 607, 728, 734, 997, 1499, 2162, 2193, 2529
HpyCH4III ACNGT 4 cut(s) 1347, 1455, 2437, 2658
HpyCH4IV ACGT 4 cut(s) 664, 1399, 1795, 2257
HpyF10VI GCNNNNNNNGC 2 cut(s) 540, 707
HpyF3I CTNAG 6 cut(s) 1298, 1317, 1785, 2195, 2228, 2337
HpySE526I ACGT 4 cut(s) 664, 1399, 1795, 2257
HspAI GCGC 1 cut(s) 684
Kzo9I GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
LguI GCTCTTC 1 cut(s) 367
LmnI GCTCC 4 cut(s) 236, 548, 600, 2257
Lsp1109I GCAGC 3 cut(s) 745, 869, 1662
LweI GCATC 8 cut(s) 25, 485, 785, 1156, 1353, 1573, 1602, 2366
MaeI CTAG 7 cut(s) 675, 971, 1020, 1038, 1196, 1599, 2219
MaeII ACGT 4 cut(s) 664, 1399, 1795, 2257
MaeIII GTNAC 5 cut(s) 172, 1329, 1820, 1851, 2010
MalI GATC 5 cut(s) 416, 2023, 2184, 2217, 2619
MbiI CCGCTC 1 cut(s) 543
MboI GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
MfeI CAATTG 2 cut(s) 2296, 2351
MflI RGATCY 2 cut(s) 414, 2021
MhlI GDGCHC 3 cut(s) 241, 724, 2552
MlsI TGGCCA 1 cut(s) 1156
MluNI TGGCCA 1 cut(s) 1156
MlyI GAGTC 2 cut(s) 1723, 2266
MmeI TCCRAC 4 cut(s) 187, 214, 987, 1984
Mox20I TGGCCA 1 cut(s) 1156
Mph1103I ATGCAT 1 cut(s) 824
MscI TGGCCA 1 cut(s) 1156
MseI TTAA 7 cut(s) 87, 264, 345, 830, 1011, 1556, 1817
MslI CAYNNNNRTG 1 cut(s) 1829
Msp20I TGGCCA 1 cut(s) 1156
MspA1I CMGCKG 2 cut(s) 1117, 1653
MspI CCGG 1 cut(s) 1692
MspR9I CCNGG 3 cut(s) 1979, 2019, 2309
MunI CAATTG 2 cut(s) 2296, 2351
Mva1269I GAATGC 4 cut(s) 157, 686, 923, 1918
MvaI CCWGG 3 cut(s) 1979, 2019, 2309
MwoI GCNNNNNNNGC 2 cut(s) 540, 707
NcoI CCATGG 2 cut(s) 546, 1843
NdeI CATATG 1 cut(s) 2237
NdeII GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
NlaIV GGNNCC 5 cut(s) 416, 722, 1744, 2549, 2600
NmuCI GTSAC 1 cut(s) 1329
NsiI ATGCAT 1 cut(s) 824
NspI RCATGY 4 cut(s) 822, 970, 1462, 2156
NspV TTCGAA 1 cut(s) 490
PaeI GCATGC 1 cut(s) 822
PagI TCATGA 1 cut(s) 147
PciI ACATGT 1 cut(s) 2152
PciSI GCTCTTC 1 cut(s) 367
PctI GAATGC 4 cut(s) 157, 686, 923, 1918
PfeI GAWTC 8 cut(s) 593, 959, 1016, 1294, 1386, 1681, 2632, 2638
PkrI GCNGC 5 cut(s) 542, 760, 884, 1652, 1655
PleI GAGTC 2 cut(s) 1722, 2266
PmaCI CACGTG 1 cut(s) 2258
PmlI CACGTG 1 cut(s) 2258
PpsI GAGTC 2 cut(s) 1722, 2266
Ppu21I YACGTR 2 cut(s) 665, 2258
PscI ACATGT 1 cut(s) 2152
PsiI TTATAA 1 cut(s) 1800
Psp6I CCWGG 3 cut(s) 1977, 2017, 2307
PspCI CACGTG 1 cut(s) 2258
PspFI CCCAGC 2 cut(s) 337, 2666
PspGI CCWGG 3 cut(s) 1977, 2017, 2307
PspN4I GGNNCC 5 cut(s) 416, 722, 1744, 2549, 2600
PspOMI GGGCCC 1 cut(s) 720
PspPI GGNCC 5 cut(s) 720, 721, 1006, 2050, 2246
PstI CTGCAG 1 cut(s) 2033
PsuI RGATCY 2 cut(s) 414, 2021
RsaI GTAC 4 cut(s) 1457, 1726, 2226, 2486
RsaNI GTAC 4 cut(s) 1456, 1725, 2225, 2485
RseI CAYNNNNRTG 1 cut(s) 1829
SapI GCTCTTC 1 cut(s) 367
SaqAI TTAA 7 cut(s) 87, 264, 345, 830, 1011, 1556, 1817
SatI GCNGC 5 cut(s) 541, 759, 883, 1651, 1654
Sau3AI GATC 5 cut(s) 414, 2021, 2182, 2215, 2617
Sau96I GGNCC 5 cut(s) 720, 721, 1006, 2050, 2246
ScaI AGTACT 1 cut(s) 1726
SchI GAGTC 2 cut(s) 1723, 2266
ScrFI CCNGG 3 cut(s) 1979, 2019, 2309
SduI GDGCHC 3 cut(s) 241, 724, 2552
SfaNI GCATC 8 cut(s) 25, 485, 785, 1156, 1353, 1573, 1602, 2366
SfcI CTRYAG 1 cut(s) 2029
SfuI TTCGAA 1 cut(s) 490
SinI GGWCC 2 cut(s) 2050, 2246
SmiMI CAYNNNNRTG 1 cut(s) 1829
SmlI CTYRAG 3 cut(s) 80, 1289, 1711
SmoI CTYRAG 3 cut(s) 80, 1289, 1711
SphI GCATGC 1 cut(s) 822
SsiI CCGC 3 cut(s) 541, 1117, 1653
SspI AATATT 3 cut(s) 1089, 1466, 1522
SspMI CTAG 7 cut(s) 675, 971, 1020, 1038, 1196, 1599, 2219
StyD4I CCNGG 3 cut(s) 1977, 2017, 2307
StyI CCWWGG 2 cut(s) 546, 1843
TaaI ACNGT 4 cut(s) 1347, 1455, 2437, 2658
TaiI ACGT 4 cut(s) 667, 1402, 1798, 2260
TaqI TCGA 6 cut(s) 490, 716, 727, 763, 1614, 2400
TatI WGTACW 4 cut(s) 1455, 1724, 2224, 2484
TauI GCSGC 2 cut(s) 543, 1656
TfiI GAWTC 8 cut(s) 593, 959, 1016, 1294, 1386, 1681, 2632, 2638
Tru1I TTAA 7 cut(s) 87, 264, 345, 830, 1011, 1556, 1817
Tru9I TTAA 7 cut(s) 87, 264, 345, 830, 1011, 1556, 1817
TscAI CASTG 3 cut(s) 1002, 1381, 1663
TseFI GTSAC 1 cut(s) 1329
TseI GCWGC 3 cut(s) 758, 882, 1650
Tsp45I GTSAC 1 cut(s) 1329
TspGWI ACGGA 5 cut(s) 404, 759, 1062, 1404, 2042
TspRI CASTG 3 cut(s) 1002, 1381, 1663
VpaK11BI GGWCC 2 cut(s) 2050, 2246
XapI RAATTY 4 cut(s) 312, 468, 1213, 2113
XbaI TCTAGA 1 cut(s) 2218
XceI RCATGY 4 cut(s) 822, 970, 1462, 2156
XcmI CCANNNNNNNNNTGG 1 cut(s) 2094
XmiI GTMKAC 1 cut(s) 691
XspI CTAG 7 cut(s) 675, 971, 1020, 1038, 1196, 1599, 2219
ZrmI AGTACT 1 cut(s) 1726
Zsp2I ATGCAT 1 cut(s) 824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.