Rroxscaffold_7G00209570

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000085
Physical Location & Seq
Forward (+)
59756307 .. 59762284
5978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00209570.1

Sequence Viewer

Length: 1785 bp
ATGGGGGAGATTGTTTTGGGAGTTCTTAATCCCGTAATGCAACTTGGTGAGTGGATATGGACCCCTGTGAAGCGTAGGATGAGTTACATGGTTCATTACAAGAGAAACTTACAGTTTCTTGGCCGTCAATTTAGAAAGCTTGAGGCGAAGTGGAATGATCATAAAGAATCTGTGGATAGTGCTGAAATGAGTGGAGACAAAATCAAGCATGAGGTTCGAGCATGGCTAACAGAAGCTGATAATGCCATGACAAATGTGAGAGAATTGAATGGTGAAGCTGGAGCAGGCGAAAAATGCTTTATAGGATGGTGTCCAGATTTGAAATGGCGCTACAATTTGGGGAAGAAAGCATCGAAGCTGACAAAAACACTAAACAAGCTTGTAGAAGAGGCACAATTTGAGACTGTTTCACTTGAAATTCGACGACCACCTGAAGTTCAGGACTTAATCTTCACTGAAGGATTTGAAGCATTTGAAGCAACTAGACAAGCCATGGAGAGAGTCATGAATGCGCTGAAGAAAGATGAGGTCACAGCCATTGGTGTCTATGGAATGGGTGGCATAGGGAAAACAACTTTGGTGAAACAAGTTGGTGCACAAGTGTGTAAAGATGGGCTCTTTGATCTTATGATAATGGCTGTTATCTCTCAGAACCCCGTGGTGTTGCAAATTCAAGACCAACTTAAAGATATGCTGGCCTTGAAGTTACATGAAACAACAGAAATGGCAAGAGCAGCTAGACTGAGGGAGAGAATTATTAGAGGAAAGAAGATCCTCATAATCTTGGACGATATTTGGGACACAATAGATTTGTCTATCATAGGAATTCCTAGCCACGACGAGATTGCAGGATGTGGTTCCAAAGTCATCCTTACCACAAGAAGAATCCAAGTTTGTCATGCCATGGGGAGTCAAGTGAAGATCCCTCTCAACCTATTATCAGAAGATGACTCTTGGAACTTGTTTGTGAAGAATGCTAGAAAGTCTTTTGAGTCGACCAATTTCTGTGAGGTAACAAAGCAGGTAACTAAAGAGTGTGGTGGCCTCCCAGTTGCATTGATAGCAGTTGCAAGGGCACTTGGAGATAAAGACCAGCTGGAAGAATGGCAAGAAGCGGCGCGACGACTAGAGATTTCCCAACCTGCAAGTCTGGATGATGACGGATGCGTGCTCAAATGTATAAGGTTAAGTTATGATTACTTGAAAGGCGAGGATGCAAAATCATGCTTCTTGCTTTGTTGCCTCTTTCCGGAAGACTCTGATATCTCAATAAAGGACTTGATGAAGTATGGAATTGGGAAAGGGTTGTTTCGGGATGCTGCCACATTTGAAGAAGCCAGAAGCAGAGCGCATTCGGTGATCAACTACCTTATATCTTCCAACTTGCTTTTGGACAGTAAAGTGGATGAATGCGTAAGGATGCATGATGTCATTCGGGATATGGCCATGTCAATCGCATCATCTGAATGTGGTGATGGATTTTTGGTCAAAGCTGGGACTCGAATAACGGTTTGGCCAAATAATGCATGTGAAGGCTACTCTGCAATCTCTTTAATGAAAAACGATATTCGGAAGCTTCCTCAAGACTTGGTATGTCCAAAACTCCAGATTTTATTACTGCAATATAATAGAAGTATAAAGGAGATCCCAGAAACATTTTTTGGAAGTTTGAATGAGTTAAAGGTCTTAGATCTCAGTCACACTGGTATTTCGATCTTACCAGTCTTTGAGTCAGCAGACCAATCTCCACGCATTATATTTAGATTATTGCAAGTCAATAGGTAA

Protein Analysis

594

Amino Acids

66.94

Weight (kDa)

6.38

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 163 - 326 4.2e-34 NB-ARC domain
LRR_8 PF13855 533 - 573 2.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1012, 1150
AccI GTMKAC 1 cut(s) 995
AccII CGCG 1 cut(s) 1120
AccIII TCCGGA 1 cut(s) 1249
AciI CCGC 1 cut(s) 1115
AclWI GGATC 3 cut(s) 766, 916, 1639
AcoI YGGCCR 3 cut(s) 121, 1443, 1514
AcsI RAATTY 3 cut(s) 417, 669, 825
AcuI CTGAAG 3 cut(s) 453, 477, 536
AfiI CCNNNNNNNGG 1 cut(s) 1249
AjuI GAANNNNNNNTTGG 6 cut(s) 560, 592, 1495, 1527, 1644, 1676
AleI CACNNNNGTG 1 cut(s) 601
AluBI AGCT 9 cut(s) 139, 236, 278, 358, 379, 737, 1096, 1493, 1576
AluI AGCT 9 cut(s) 139, 236, 278, 358, 379, 737, 1096, 1493, 1576
Alw21I GWGCWC 2 cut(s) 598, 1173
Alw26I GTCTC 2 cut(s) 189, 395
Alw44I GTGCAC 1 cut(s) 594
AlwI GGATC 3 cut(s) 766, 916, 1639
AlwNI CAGNNNCTG 1 cut(s) 236
Aor13HI TCCGGA 1 cut(s) 1249
AoxI GGCC 5 cut(s) 121, 696, 1042, 1443, 1514
ApaLI GTGCAC 1 cut(s) 594
ApeKI GCWGC 2 cut(s) 734, 1319
ApoI RAATTY 3 cut(s) 417, 669, 825
AspLEI GCGC 4 cut(s) 330, 514, 1120, 1351
AspS9I GGNCC 1 cut(s) 60
AsuHPI GGTGA 5 cut(s) 59, 284, 592, 1369, 1484
AvaII GGWCC 1 cut(s) 60
BaeGI GKGCMC 2 cut(s) 598, 1078
BalI TGGCCA 2 cut(s) 1445, 1516
BanII GRGCYC 1 cut(s) 618
BbsI GAAGAC 1 cut(s) 1260
Bbv12I GWGCWC 2 cut(s) 598, 1173
BbvI GCAGC 2 cut(s) 746, 1306
BccI CCATC 3 cut(s) 300, 605, 1469
BceAI ACGGC 1 cut(s) 108
BcgI CGANNNNNNTGC 4 cut(s) 197, 231, 827, 861
BclI TGATCA 2 cut(s) 157, 1359
BcoDI GTCTC 2 cut(s) 189, 395
BfaI CTAG 5 cut(s) 483, 738, 831, 978, 1127
BfoI RGCGCY 1 cut(s) 331
BfuAI ACCTGC 2 cut(s) 1012, 1150
BglII AGATCT 1 cut(s) 1690
BisI GCNGC 3 cut(s) 735, 1116, 1320
BlsI GCNGC 3 cut(s) 736, 1117, 1321
Bme18I GGWCC 1 cut(s) 60
BmgT120I GGNCC 1 cut(s) 60
BmiI GGNNCC 2 cut(s) 62, 859
BmrI ACTGGG 1 cut(s) 1043
BmsI GCATC 6 cut(s) 359, 1154, 1204, 1306, 1410, 1466
BmuI ACTGGG 1 cut(s) 1043
BpiI GAAGAC 1 cut(s) 1260
BpmI CTGGAG 2 cut(s) 300, 1589
BpuEI CTTGAG 2 cut(s) 161, 1566
BsaJI CCNNGG 3 cut(s) 492, 657, 903
BsaWI WCCGGW 1 cut(s) 1249
Bsc4I CCNNNNNNNGG 1 cut(s) 1249
Bse1I ACTGG 3 cut(s) 1049, 1708, 1721
BseAI TCCGGA 1 cut(s) 1249
BseDI CCNNGG 3 cut(s) 492, 657, 903
BseLI CCNNNNNNNGG 1 cut(s) 1249
BseMII CTCAG 3 cut(s) 662, 734, 1708
BseNI ACTGG 3 cut(s) 1049, 1708, 1721
BseSI GKGCMC 2 cut(s) 598, 1078
BseXI GCAGC 2 cut(s) 746, 1306
BseYI CCCAGC 1 cut(s) 1493
Bsh1236I CGCG 1 cut(s) 1120
BshFI GGCC 5 cut(s) 123, 698, 1044, 1445, 1516
BsiHKAI GWGCWC 2 cut(s) 598, 1173
BsiSI CCGG 1 cut(s) 1250
BslFI GGGAC 2 cut(s) 812, 1510
BslI CCNNNNNNNGG 1 cut(s) 1249
BsmAI GTCTC 2 cut(s) 189, 395
BsmFI GGGAC 2 cut(s) 812, 1510
BsmI GAATGC 4 cut(s) 514, 979, 1351, 1415
BsnI GGCC 5 cut(s) 123, 698, 1044, 1445, 1516
Bsp1286I GDGCHC 4 cut(s) 598, 618, 1078, 1173
Bsp13I TCCGGA 1 cut(s) 1249
Bsp143I GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
Bsp19I CCATGG 2 cut(s) 492, 903
BspACI CCGC 1 cut(s) 1115
BspANI GGCC 5 cut(s) 123, 698, 1044, 1445, 1516
BspCNI CTCAG 3 cut(s) 661, 735, 1707
BspEI TCCGGA 1 cut(s) 1249
BspFNI CGCG 1 cut(s) 1120
BspHI TCATGA 1 cut(s) 504
BspLI GGNNCC 2 cut(s) 62, 859
BspMI ACCTGC 2 cut(s) 1012, 1150
BspPI GGATC 3 cut(s) 766, 916, 1639
BsrI ACTGG 3 cut(s) 1049, 1708, 1721
BssECI CCNNGG 3 cut(s) 492, 657, 903
BssMI GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
BssT1I CCWWGG 2 cut(s) 492, 903
Bst4CI ACNGT 4 cut(s) 114, 406, 1397, 1510
Bst6I CTCTTC 1 cut(s) 381
BstC8I GCNNGC 3 cut(s) 286, 696, 1169
BstDEI CTNAG 4 cut(s) 648, 743, 1687, 1694
BstDSI CCRYGG 3 cut(s) 492, 657, 903
BstFNI CGCG 1 cut(s) 1120
BstH2I RGCGCY 1 cut(s) 331
BstHHI GCGC 4 cut(s) 330, 514, 1120, 1351
BstKTI GATC 8 cut(s) 160, 625, 774, 924, 1362, 1647, 1693, 1716
BstMAI GTCTC 2 cut(s) 189, 395
BstMBI GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
BstMWI GCNNNNNNNGC 5 cut(s) 242, 294, 476, 734, 1061
BstNSI RCATGY 1 cut(s) 1530
BstSLI GKGCMC 2 cut(s) 598, 1078
BstUI CGCG 1 cut(s) 1120
BstV1I GCAGC 2 cut(s) 746, 1306
BstV2I GAAGAC 1 cut(s) 1260
BstX2I RGATCY 4 cut(s) 771, 921, 1644, 1690
BstYI RGATCY 4 cut(s) 771, 921, 1644, 1690
BsuRI GGCC 5 cut(s) 123, 698, 1044, 1445, 1516
BtgI CCRYGG 3 cut(s) 492, 657, 903
BtsIMutI CAGTG 2 cut(s) 453, 1701
BveI ACCTGC 2 cut(s) 1012, 1150
Cac8I GCNNGC 3 cut(s) 286, 696, 1169
CaiI CAGNNNCTG 1 cut(s) 236
CciI TCATGA 1 cut(s) 504
CfoI GCGC 4 cut(s) 330, 514, 1120, 1351
Cfr13I GGNCC 1 cut(s) 60
DdeI CTNAG 4 cut(s) 648, 743, 1687, 1694
DpnI GATC 8 cut(s) 159, 624, 773, 923, 1361, 1646, 1692, 1715
DpnII GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
EaeI YGGCCR 3 cut(s) 121, 1443, 1514
Eam1104I CTCTTC 1 cut(s) 381
EarI CTCTTC 1 cut(s) 381
Eco130I CCWWGG 2 cut(s) 492, 903
Eco24I GRGCYC 1 cut(s) 618
Eco32I GATATC 1 cut(s) 1264
Eco47I GGWCC 1 cut(s) 60
Eco57I CTGAAG 3 cut(s) 453, 477, 536
EcoRI GAATTC 1 cut(s) 825
EcoRV GATATC 1 cut(s) 1264
EcoT14I CCWWGG 2 cut(s) 492, 903
EcoT22I ATGCAT 2 cut(s) 1425, 1528
EcoT38I GRGCYC 1 cut(s) 618
ErhI CCWWGG 2 cut(s) 492, 903
FalI AAGNNNNNCTT 6 cut(s) 92, 124, 666, 698, 855, 887
FaqI GGGAC 2 cut(s) 812, 1510
FbaI TGATCA 2 cut(s) 157, 1359
FblI GTMKAC 1 cut(s) 995
Fnu4HI GCNGC 3 cut(s) 735, 1116, 1320
FriOI GRGCYC 1 cut(s) 618
Fsp4HI GCNGC 3 cut(s) 735, 1116, 1320
FspBI CTAG 5 cut(s) 483, 738, 831, 978, 1127
GlaI GCGC 4 cut(s) 329, 513, 1119, 1350
GluI GCNGC 3 cut(s) 735, 1116, 1320
GsaI CCCAGC 1 cut(s) 1497
GsuI CTGGAG 2 cut(s) 300, 1589
HaeII RGCGCY 1 cut(s) 331
HaeIII GGCC 5 cut(s) 123, 698, 1044, 1445, 1516
HapII CCGG 1 cut(s) 1250
HhaI GCGC 4 cut(s) 330, 514, 1120, 1351
Hin6I GCGC 4 cut(s) 328, 512, 1118, 1349
HinP1I GCGC 4 cut(s) 328, 512, 1118, 1349
HincII GTYRAC 1 cut(s) 996
HindII GTYRAC 1 cut(s) 996
HindIII AAGCTT 3 cut(s) 137, 377, 1574
HinfI GANTC 9 cut(s) 167, 501, 885, 910, 950, 992, 1256, 1498, 1730
HpaII CCGG 1 cut(s) 1250
HphI GGTGA 5 cut(s) 59, 284, 592, 1369, 1484
Hpy166II GTNNAC 2 cut(s) 596, 996
Hpy188I TCNGA 5 cut(s) 651, 943, 1261, 1465, 1572
Hpy8I GTNNAC 2 cut(s) 596, 996
Hpy99I CGWCG 3 cut(s) 426, 842, 1125
HpyAV CCTTC 2 cut(s) 452, 1526
HpyCH4III ACNGT 4 cut(s) 114, 406, 1397, 1510
HpyF10VI GCNNNNNNNGC 5 cut(s) 242, 294, 476, 734, 1061
HpyF3I CTNAG 4 cut(s) 648, 743, 1687, 1694
HspAI GCGC 4 cut(s) 328, 512, 1118, 1349
Kpn2I TCCGGA 1 cut(s) 1249
Ksp22I TGATCA 2 cut(s) 157, 1359
Kzo9I GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
LmnI GCTCC 1 cut(s) 281
Lsp1109I GCAGC 2 cut(s) 746, 1306
LweI GCATC 6 cut(s) 359, 1154, 1204, 1306, 1410, 1466
MaeI CTAG 5 cut(s) 483, 738, 831, 978, 1127
MaeIII GTNAC 6 cut(s) 83, 529, 705, 1012, 1024, 1697
MalI GATC 8 cut(s) 159, 624, 773, 923, 1361, 1646, 1692, 1715
MboI GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
MflI RGATCY 4 cut(s) 771, 921, 1644, 1690
MhlI GDGCHC 4 cut(s) 598, 618, 1078, 1173
MlsI TGGCCA 2 cut(s) 1445, 1516
MluNI TGGCCA 2 cut(s) 1445, 1516
MlyI GAGTC 7 cut(s) 510, 919, 944, 1001, 1250, 1492, 1739
MmeI TCCRAC 1 cut(s) 1404
Mox20I TGGCCA 2 cut(s) 1445, 1516
Mph1103I ATGCAT 2 cut(s) 1425, 1528
MroI TCCGGA 1 cut(s) 1249
MscI TGGCCA 2 cut(s) 1445, 1516
MseI TTAA 6 cut(s) 27, 446, 684, 1187, 1553, 1679
MslI CAYNNNNRTG 2 cut(s) 601, 1465
Msp20I TGGCCA 2 cut(s) 1445, 1516
MspA1I CMGCKG 1 cut(s) 1096
MspI CCGG 1 cut(s) 1250
Mva1269I GAATGC 4 cut(s) 514, 979, 1351, 1415
MvnI CGCG 1 cut(s) 1120
MwoI GCNNNNNNNGC 5 cut(s) 242, 294, 476, 734, 1061
NcoI CCATGG 2 cut(s) 492, 903
NdeII GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
NlaIV GGNNCC 2 cut(s) 62, 859
NmuCI GTSAC 2 cut(s) 529, 1697
NsiI ATGCAT 2 cut(s) 1425, 1528
NspI RCATGY 1 cut(s) 1530
OliI CACNNNNGTG 1 cut(s) 601
PagI TCATGA 1 cut(s) 504
PctI GAATGC 4 cut(s) 514, 979, 1351, 1415
PfeI GAWTC 2 cut(s) 167, 885
PkrI GCNGC 3 cut(s) 736, 1117, 1321
PleI GAGTC 7 cut(s) 509, 918, 944, 1000, 1250, 1492, 1738
PpsI GAGTC 7 cut(s) 509, 918, 944, 1000, 1250, 1492, 1738
PspFI CCCAGC 1 cut(s) 1493
PspN4I GGNNCC 2 cut(s) 62, 859
PspPI GGNCC 1 cut(s) 60
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 4 cut(s) 771, 921, 1644, 1690
PvuII CAGCTG 1 cut(s) 1096
RseI CAYNNNNRTG 2 cut(s) 601, 1465
SalI GTCGAC 1 cut(s) 994
SaqAI TTAA 6 cut(s) 27, 446, 684, 1187, 1553, 1679
SatI GCNGC 3 cut(s) 735, 1116, 1320
Sau3AI GATC 8 cut(s) 157, 622, 771, 921, 1359, 1644, 1690, 1713
Sau96I GGNCC 1 cut(s) 60
SchI GAGTC 7 cut(s) 510, 919, 944, 1001, 1250, 1492, 1739
SduI GDGCHC 4 cut(s) 598, 618, 1078, 1173
SfaNI GCATC 6 cut(s) 359, 1154, 1204, 1306, 1410, 1466
SinI GGWCC 1 cut(s) 60
SmiMI CAYNNNNRTG 2 cut(s) 601, 1465
SmlI CTYRAG 2 cut(s) 140, 1581
SmoI CTYRAG 2 cut(s) 140, 1581
SsiI CCGC 1 cut(s) 1115
SspMI CTAG 5 cut(s) 483, 738, 831, 978, 1127
StyI CCWWGG 2 cut(s) 492, 903
TaaI ACNGT 4 cut(s) 114, 406, 1397, 1510
TaqI TCGA 6 cut(s) 217, 353, 421, 995, 1501, 1712
TauI GCSGC 1 cut(s) 1118
TfiI GAWTC 2 cut(s) 167, 885
Tru1I TTAA 6 cut(s) 27, 446, 684, 1187, 1553, 1679
Tru9I TTAA 6 cut(s) 27, 446, 684, 1187, 1553, 1679
TscAI CASTG 2 cut(s) 460, 1708
TseFI GTSAC 2 cut(s) 529, 1697
TseI GCWGC 2 cut(s) 734, 1319
Tsp45I GTSAC 2 cut(s) 529, 1697
TspDTI ATGAA 6 cut(s) 83, 521, 726, 1298, 1422, 1571
TspGWI ACGGA 1 cut(s) 1176
TspRI CASTG 2 cut(s) 460, 1708
VneI GTGCAC 1 cut(s) 594
VpaK11BI GGWCC 1 cut(s) 60
XapI RAATTY 3 cut(s) 417, 669, 825
XceI RCATGY 1 cut(s) 1530
XcmI CCANNNNNNNNNTGG 2 cut(s) 321, 1387
XmiI GTMKAC 1 cut(s) 995
XspI CTAG 5 cut(s) 483, 738, 831, 978, 1127
Zsp2I ATGCAT 2 cut(s) 1425, 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.