Rmu_sc0003069.1_g000051

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003069.1
Physical Location & Seq
Reverse (-)
226325 .. 227092
768 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003069.1_g000051.1.cds

Sequence Viewer

Length: 768 bp
atgaatgcaataacatgtgttccagatatgcctgtgtttgagaacttggaagagttggtactgtttaggctggatgacctgaagcagttatgtgttggtgagttaccacctggatctctctgcagtctgaaattattggaggtccgtcagtgtcgtaacttgaggaatgtactgttgccatcaaaattgttgcagaaactaccaaatctggaaaaactatactgtgatggaggtaaagtggatcatgtgtttgaatgtaaaggatttgagccagatcaaacaaatctgagggagatggagttgcgagatctagatgtagtacgaagcatatgtaatggtcctgctccacgcggaatgttccaggctctaaagcaattggtcatttacaagtgcaacttccaaggaagtctcttcacatttgatgtagctcagtgtctttttcaattggaaaaccttactgtatccgaatgccctgtcttggaaagagtaatcgaaaggagggaaacattgaacaacaagaagaccgttcttccaaaattgaagaacctaaatttggaaaatcttccaatgttgtacgagggaagtgctactattgattttgagtgtccttcattggaaaacctgagtctgtttggctgcccccacttgtcatttccatcctctgcttctgactacttccacagcaggaaccaagtcgttttcaatgatgctcttcgtcattctctgctactcagcaaactagggtataagtatgtcgctgggtcataa

Protein Analysis

255

Amino Acids

28.95

Weight (kDa)

5.88

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 351
AciI CCGC 1 cut(s) 351
AclWI GGATC 2 cut(s) 121, 249
AcsI RAATTY 1 cut(s) 550
AcuI CTGAAG 1 cut(s) 101
AfaI GTAC 4 cut(s) 60, 171, 321, 575
AfiI CCNNNNNNNGG 2 cut(s) 478, 553
AflIII ACRYGT 1 cut(s) 14
AgsI TTSAA 5 cut(s) 254, 443, 511, 541, 703
AjnI CCWGG 2 cut(s) 109, 360
AjuI GAANNNNNNNTTGG 2 cut(s) 536, 568
AluBI AGCT 1 cut(s) 428
AluI AGCT 1 cut(s) 428
Alw26I GTCTC 1 cut(s) 413
AlwI GGATC 2 cut(s) 121, 249
ApeKI GCWGC 1 cut(s) 636
ApoI RAATTY 1 cut(s) 550
ArsI GACNNNNNNTTYG 2 cut(s) 459, 491
Asp700I GAANNNNTTC 1 cut(s) 561
AspS9I GGNCC 2 cut(s) 142, 338
AsuHPI GGTGA 1 cut(s) 110
AvaII GGWCC 2 cut(s) 142, 338
BarI GAAGNNNNNNTAC 2 cut(s) 42, 74
BbsI GAAGAC 1 cut(s) 527
BbvI GCAGC 1 cut(s) 623
BccI CCATC 4 cut(s) 187, 221, 289, 664
BcgI CGANNNNNNTGC 2 cut(s) 566, 600
BciT130I CCWGG 2 cut(s) 111, 362
BciVI GTATCC 1 cut(s) 472
BcoDI GTCTC 1 cut(s) 413
BfaI CTAG 2 cut(s) 311, 740
BfmI CTRYAG 1 cut(s) 121
BfuI GTATCC 1 cut(s) 472
BglII AGATCT 1 cut(s) 307
BisI GCNGC 1 cut(s) 637
BlsI GCNGC 1 cut(s) 638
Bme1390I CCNGG 2 cut(s) 111, 362
Bme18I GGWCC 2 cut(s) 142, 338
BmgT120I GGNCC 2 cut(s) 142, 338
BmiI GGNNCC 1 cut(s) 689
BmrFI CCNGG 2 cut(s) 111, 362
BmsI GCATC 1 cut(s) 697
BpiI GAAGAC 1 cut(s) 527
BpuEI CTTGAG 1 cut(s) 181
BsaJI CCNNGG 1 cut(s) 400
BsaXI ACNNNNNCTCC 4 cut(s) 222, 252, 284, 314
Bsc4I CCNNNNNNNGG 2 cut(s) 478, 553
BseBI CCWGG 2 cut(s) 111, 362
BseDI CCNNGG 1 cut(s) 400
BseGI GGATG 2 cut(s) 79, 656
BseLI CCNNNNNNNGG 2 cut(s) 478, 553
BseMII CTCAG 4 cut(s) 278, 443, 614, 745
BseXI GCAGC 1 cut(s) 623
BseYI CCCAGC 1 cut(s) 758
Bsh1236I CGCG 1 cut(s) 351
BslI CCNNNNNNNGG 2 cut(s) 478, 553
BsmAI GTCTC 1 cut(s) 413
BsmI GAATGC 2 cut(s) 10, 473
Bsp143I GATC 4 cut(s) 113, 241, 274, 307
BspACI CCGC 1 cut(s) 351
BspCNI CTCAG 4 cut(s) 279, 442, 615, 744
BspFNI CGCG 1 cut(s) 351
BspLI GGNNCC 1 cut(s) 689
BspMAI CTGCAG 1 cut(s) 125
BspPI GGATC 2 cut(s) 121, 249
BspQI GCTCTTC 1 cut(s) 717
BssECI CCNNGG 1 cut(s) 400
BssMI GATC 4 cut(s) 113, 241, 274, 307
BssT1I CCWWGG 1 cut(s) 400
Bst2UI CCWGG 2 cut(s) 111, 362
Bst4CI ACNGT 5 cut(s) 63, 174, 224, 460, 526
Bst6I CTCTTC 3 cut(s) 45, 416, 717
BstDEI CTNAG 4 cut(s) 287, 429, 623, 731
BstF5I GGATG 2 cut(s) 79, 656
BstFNI CGCG 1 cut(s) 351
BstKTI GATC 4 cut(s) 116, 244, 277, 310
BstMAI GTCTC 1 cut(s) 413
BstMBI GATC 4 cut(s) 113, 241, 274, 307
BstNI CCWGG 2 cut(s) 111, 362
BstNSI RCATGY 1 cut(s) 18
BstSCI CCNGG 2 cut(s) 109, 360
BstSFI CTRYAG 1 cut(s) 121
BstUI CGCG 1 cut(s) 351
BstV1I GCAGC 1 cut(s) 623
BstV2I GAAGAC 1 cut(s) 527
BstX2I RGATCY 2 cut(s) 113, 307
BstYI RGATCY 2 cut(s) 113, 307
BsuI GTATCC 1 cut(s) 472
BtsCI GGATG 2 cut(s) 79, 656
BtsIMutI CAGTG 2 cut(s) 155, 437
Cfr13I GGNCC 2 cut(s) 142, 338
Csp6I GTAC 4 cut(s) 59, 170, 320, 574
CviAII CATG 2 cut(s) 15, 245
CviJI RGCY 5 cut(s) 70, 271, 365, 428, 636
CviKI_1 RGCY 5 cut(s) 70, 271, 365, 428, 636
CviQI GTAC 4 cut(s) 59, 170, 320, 574
DdeI CTNAG 4 cut(s) 287, 429, 623, 731
DpnI GATC 4 cut(s) 115, 243, 276, 309
DpnII GATC 4 cut(s) 113, 241, 274, 307
Eam1104I CTCTTC 3 cut(s) 45, 416, 717
EarI CTCTTC 3 cut(s) 45, 416, 717
Eco130I CCWWGG 1 cut(s) 400
Eco47I GGWCC 2 cut(s) 142, 338
Eco57I CTGAAG 1 cut(s) 101
EcoRII CCWGG 2 cut(s) 109, 360
EcoT14I CCWWGG 1 cut(s) 400
ErhI CCWWGG 1 cut(s) 400
FaeI CATG 2 cut(s) 18, 248
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FatI CATG 2 cut(s) 14, 244
FauNDI CATATG 1 cut(s) 329
Fnu4HI GCNGC 1 cut(s) 637
FokI GGATG 2 cut(s) 86, 643
Fsp4HI GCNGC 1 cut(s) 637
FspBI CTAG 2 cut(s) 311, 740
GluI GCNGC 1 cut(s) 637
GsaI CCCAGC 1 cut(s) 762
Hin1II CATG 2 cut(s) 18, 248
HinfI GANTC 1 cut(s) 625
HphI GGTGA 1 cut(s) 110
Hpy188I TCNGA 4 cut(s) 129, 288, 466, 670
Hpy188III TCNNGA 3 cut(s) 23, 209, 311
HpyAV CCTTC 1 cut(s) 618
HpyCH4III ACNGT 5 cut(s) 63, 174, 224, 460, 526
HpyCH4V TGCA 4 cut(s) 8, 123, 193, 393
HpyF3I CTNAG 4 cut(s) 287, 429, 623, 731
Hsp92II CATG 2 cut(s) 18, 248
Kzo9I GATC 4 cut(s) 113, 241, 274, 307
LguI GCTCTTC 1 cut(s) 717
LmnI GCTCC 1 cut(s) 349
Lsp1109I GCAGC 1 cut(s) 623
LweI GCATC 1 cut(s) 697
MaeI CTAG 2 cut(s) 311, 740
MaeIII GTNAC 2 cut(s) 102, 155
MalI GATC 4 cut(s) 115, 243, 276, 309
MboI GATC 4 cut(s) 113, 241, 274, 307
MboII GAAGA 7 cut(s) 62, 403, 521, 532, 553, 554, 704
MfeI CAATTG 2 cut(s) 374, 443
MflI RGATCY 2 cut(s) 113, 307
MluCI AATT 6 cut(s) 131, 185, 374, 443, 536, 550
MlyI GAGTC 1 cut(s) 634
MnlI CCTC 7 cut(s) 133, 156, 224, 282, 492, 571, 670
MroXI GAANNNNTTC 1 cut(s) 561
MspR9I CCNGG 2 cut(s) 111, 362
MunI CAATTG 2 cut(s) 374, 443
Mva1269I GAATGC 2 cut(s) 10, 473
MvaI CCWGG 2 cut(s) 111, 362
MvnI CGCG 1 cut(s) 351
NdeI CATATG 1 cut(s) 329
NdeII GATC 4 cut(s) 113, 241, 274, 307
NlaIII CATG 2 cut(s) 18, 248
NlaIV GGNNCC 1 cut(s) 689
NspI RCATGY 1 cut(s) 18
PciI ACATGT 1 cut(s) 14
PciSI GCTCTTC 1 cut(s) 717
PctI GAATGC 2 cut(s) 10, 473
PdmI GAANNNNTTC 1 cut(s) 561
PkrI GCNGC 1 cut(s) 638
PleI GAGTC 1 cut(s) 633
PpsI GAGTC 1 cut(s) 633
PscI ACATGT 1 cut(s) 14
Psp6I CCWGG 2 cut(s) 109, 360
PspFI CCCAGC 1 cut(s) 758
PspGI CCWGG 2 cut(s) 109, 360
PspN4I GGNNCC 1 cut(s) 689
PspPI GGNCC 2 cut(s) 142, 338
PstI CTGCAG 1 cut(s) 125
PsuI RGATCY 2 cut(s) 113, 307
RsaI GTAC 4 cut(s) 60, 171, 321, 575
RsaNI GTAC 4 cut(s) 59, 170, 320, 574
SapI GCTCTTC 1 cut(s) 717
SatI GCNGC 1 cut(s) 637
Sau3AI GATC 4 cut(s) 113, 241, 274, 307
Sau96I GGNCC 2 cut(s) 142, 338
SchI GAGTC 1 cut(s) 634
ScrFI CCNGG 2 cut(s) 111, 362
SetI ASST 8 cut(s) 81, 112, 144, 235, 430, 456, 549, 624
SfaNI GCATC 1 cut(s) 697
SfcI CTRYAG 1 cut(s) 121
SinI GGWCC 2 cut(s) 142, 338
SmlI CTYRAG 1 cut(s) 160
SmoI CTYRAG 1 cut(s) 160
Sse9I AATT 6 cut(s) 131, 185, 374, 443, 536, 550
SsiI CCGC 1 cut(s) 351
SspMI CTAG 2 cut(s) 311, 740
StyD4I CCNGG 2 cut(s) 109, 360
StyI CCWWGG 1 cut(s) 400
TaaI ACNGT 5 cut(s) 63, 174, 224, 460, 526
TaqI TCGA 1 cut(s) 492
TasI AATT 6 cut(s) 131, 185, 374, 443, 536, 550
TatI WGTACW 1 cut(s) 169
TscAI CASTG 2 cut(s) 155, 437
TseI GCWGC 1 cut(s) 636
TspDTI ATGAA 2 cut(s) 17, 600
TspGWI ACGGA 1 cut(s) 134
TspRI CASTG 2 cut(s) 155, 437
VpaK11BI GGWCC 2 cut(s) 142, 338
XapI RAATTY 1 cut(s) 550
XbaI TCTAGA 1 cut(s) 310
XceI RCATGY 1 cut(s) 18
XmnI GAANNNNTTC 1 cut(s) 561
XspI CTAG 2 cut(s) 311, 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.