Rorug05G0466300

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Reverse (-)
64198480 .. 64200612
2133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0466300.1

Sequence Viewer

Length: 1530 bp
ATGGAGTCCAAGAAGCTTCTCCTCCTCTTCCTCTTCTGCCTTTTCCACTCCGCCTGCCACGTCATCCTCACCGCCGCCATCGGCGTCAACTACGGCACAGTAGCCGACAACCTCCCGCCCCCGTCCCAGGTCGCCACCTTCCTCAAGACCAAGACCACCATCGACCGCGTCAAGATCTTCGACACCAACCCCGACGTCCTCCGCGCCTTCGCCAACACCGGCATCGCCGTCACCGTCACCGTCGGTAACGGCGACTTCCCGCCCCTCGCCAAGCTCCCCGCCGCCCAGTCATGGGTGGCCGACAACATCCTCCCCTTCTATCCCCGCACCAACATCAACCGAATCGCCGTCGGGAACGAAATCCTCGCCACGTCGGACAAGGACCTCATCGCGCATCTCCTGCCGGCTATGAAGGCGCTCCACTCGGCTCTCAACCTCGCCAACATCACCACCATTCAGGTATCGACACCTCACTCGCTCGGCATTCTAGCCCCCAACACGGGCCCACCGAGCCTCGGACAGTTCCGGAGCGGCTACGACAAGATCATATTCGAGCCGATCTTGGAGTACCATCGCCAGACCAAATCGCCGTTCCTCGTCAACCCATACCCGTTTTTCGGACTCTCACCTGATACGCTCAACTACGCGACTTTCAGGCCAAACGGCGGCGTTTTCGACAATGCCACCGGCATGAACTACACCAACATGTTCGATGCCCAGATGGACGCGGTTTTCTCGGCGATGAAGAAGATCGGGTATGAAGACGTGGATCTAGTAGTCGCCGAAACCGGTTGGCCCTCCGCGGGTGACCCGAACCAACTCGGTGTGAGCTTGGAAAACGCGGTGTCGTACAACGGGAACCTCATCCGCCACGTCAGCTCCGGGAAGGGCACGCCGTTGATGCCGAACAGGACGTTCGAGACTTACATTTTCGCTCTGTTTAATGAGAACCTGAAGCCCACGCTGTCGGAGCAGAATTACGGGCTGTTCAAACCCGACCTCGACCCGGTTTACGACGTGGGCCTTTTACGCAACGGGCAGGCACCGGGCCCCACATCCGGCCCGGCATCAGGCCCATCAGCGAGTACCGCAGCAGGCCCAGCAGCGATGGGTCCCACGCCCGATGTAGTTGCGCAACCACCGTCGTCGACGGGGAAGAGGTGGTGCGTGCCGAAACCGAACGCTACCAAGGCGGCGCTGCAGAAGAACATAGACTACGTTTGCAGCAGCGGAGTGGACTGCAAGCCCATACAGAACGGTGGGTCGTGCTTTGAGCCGAACACTGTGAAGTCACACGCGGCTTACGTCATGAACGCCTATTACCAGGATCATGGGCCACAGGATATTAACTGCGATTTCAACGGCACCGGAGTGGTCACCACCGCTGATCCCAGTTACAAAACGTGCACGTACCCTAACAAGGCGGAGAAGGAGGCAAAGTCGGTGGCGGGAAGCTCAACGAGAATGAGATGTAGCAAAGTGGCTCTGTCCTTTCTAATGGTCGGTTGTGGTGTAATGTTTAATATTTAG

Protein Analysis

509

Amino Acids

54.59

Weight (kDa)

7.08

Isoelectric Point (pI)

35.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 27 - 340 7.8e-78 Glycosyl hydrolases family 17
X8 PF07983 388 - 457 1.2e-23 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 198
Acc16I TGCGCA 1 cut(s) 1134
AccB1I GGYRCC 2 cut(s) 1042, 1364
AccBSI CCGCTC 1 cut(s) 531
AccI GTMKAC 1 cut(s) 1148
AccII CGCG 8 cut(s) 168, 204, 392, 647, 728, 803, 842, 1298
AccIII TCCGGA 1 cut(s) 525
AclWI GGATC 3 cut(s) 777, 1335, 1382
AcoI YGGCCR 1 cut(s) 297
AcuI CTGAAG 1 cut(s) 974
AcyI GRCGYC 2 cut(s) 84, 195
AfaI GTAC 4 cut(s) 569, 851, 1087, 1412
AflIII ACRYGT 1 cut(s) 705
AgeI ACCGGT 1 cut(s) 788
AgsI TTSAA 2 cut(s) 991, 1360
AjiI CACGTC 5 cut(s) 61, 372, 766, 874, 1018
AjnI CCWGG 2 cut(s) 126, 1323
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
AleI CACNNNNGTG 1 cut(s) 1370
AluBI AGCT 5 cut(s) 16, 274, 831, 879, 1455
AluI AGCT 5 cut(s) 16, 274, 831, 879, 1455
Alw21I GWGCWC 1 cut(s) 1409
Alw26I GTCTC 1 cut(s) 914
Alw44I GTGCAC 1 cut(s) 1405
AlwI GGATC 3 cut(s) 777, 1335, 1382
Aor13HI TCCGGA 1 cut(s) 525
ApaI GGGCCC 2 cut(s) 506, 1052
ApaLI GTGCAC 1 cut(s) 1405
ApeKI GCWGC 5 cut(s) 1091, 1103, 1198, 1224, 1227
AsiGI ACCGGT 1 cut(s) 788
AspLEI GCGC 5 cut(s) 206, 394, 418, 1135, 1198
AsuC2I CCSGG 4 cut(s) 883, 1007, 1047, 1064
AsuHPI GGTGA 7 cut(s) 61, 223, 229, 439, 618, 818, 1369
AvaII GGWCC 2 cut(s) 382, 1112
BaeGI GKGCMC 4 cut(s) 506, 893, 1052, 1409
BanI GGYRCC 2 cut(s) 1042, 1364
BanII GRGCYC 2 cut(s) 506, 1052
BbsI GAAGAC 1 cut(s) 768
Bbv12I GWGCWC 1 cut(s) 1409
BbvI GCAGC 5 cut(s) 1103, 1115, 1185, 1236, 1239
BccI CCATC 6 cut(s) 86, 167, 579, 715, 1084, 1102
BceAI ACGGC 8 cut(s) 109, 212, 265, 332, 574, 679, 880, 1378
BcgI CGANNNNNNTGC 2 cut(s) 1112, 1146
BciT130I CCWGG 2 cut(s) 128, 1325
BcnI CCSGG 4 cut(s) 883, 1007, 1047, 1064
BcoDI GTCTC 1 cut(s) 914
BfaI CTAG 2 cut(s) 488, 773
BfmI CTRYAG 1 cut(s) 1199
BfoI RGCGCY 2 cut(s) 419, 1199
BglII AGATCT 1 cut(s) 174
Bme1390I CCNGG 6 cut(s) 128, 883, 1007, 1047, 1064, 1325
Bme18I GGWCC 2 cut(s) 382, 1112
BmgBI CACGTC 5 cut(s) 61, 372, 766, 874, 1018
BmiI GGNNCC 8 cut(s) 504, 860, 1044, 1050, 1051, 1113, 1114, 1366
BmrFI CCNGG 6 cut(s) 128, 883, 1007, 1047, 1064, 1325
BmrI ACTGGG 2 cut(s) 280, 1386
BmsI GCATC 5 cut(s) 231, 403, 703, 891, 1076
BmuI ACTGGG 2 cut(s) 280, 1386
BpiI GAAGAC 1 cut(s) 768
BpuEI CTTGAG 1 cut(s) 128
BpuMI CCSGG 4 cut(s) 883, 1007, 1047, 1064
BsaAI YACGTR 1 cut(s) 1410
BsaHI GRCGYC 2 cut(s) 84, 195
BsaJI CCNNGG 4 cut(s) 126, 514, 801, 1188
BsaWI WCCGGW 3 cut(s) 525, 788, 1367
BsaXI ACNNNNNCTCC 4 cut(s) 863, 893, 1424, 1454
Bse118I RCCGGY 4 cut(s) 218, 403, 686, 788
Bse1I ACTGG 2 cut(s) 286, 1392
BseAI TCCGGA 1 cut(s) 525
BseBI CCWGG 2 cut(s) 128, 1325
BseDI CCNNGG 4 cut(s) 126, 514, 801, 1188
BseGI GGATG 4 cut(s) 63, 306, 864, 1055
BseNI ACTGG 2 cut(s) 286, 1392
BseRI GAGGAG 2 cut(s) 11, 14
BseSI GKGCMC 4 cut(s) 506, 893, 1052, 1409
BseXI GCAGC 5 cut(s) 1103, 1115, 1185, 1236, 1239
BseYI CCCAGC 1 cut(s) 1099
Bsh1236I CGCG 8 cut(s) 168, 204, 392, 647, 728, 803, 842, 1298
Bsh1285I CGRYCG 1 cut(s) 166
BshNI GGYRCC 2 cut(s) 1042, 1364
BshTI ACCGGT 1 cut(s) 788
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 1409
BslFI GGGAC 2 cut(s) 109, 1098
BsmAI GTCTC 1 cut(s) 914
BsmFI GGGAC 2 cut(s) 109, 1098
BsmI GAATGC 1 cut(s) 483
Bsp120I GGGCCC 2 cut(s) 502, 1048
Bsp1286I GDGCHC 4 cut(s) 506, 893, 1052, 1409
Bsp13I TCCGGA 1 cut(s) 525
Bsp143I GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
BspEI TCCGGA 1 cut(s) 525
BspFNI CGCG 8 cut(s) 168, 204, 392, 647, 728, 803, 842, 1298
BspHI TCATGA 1 cut(s) 1308
BspLI GGNNCC 8 cut(s) 504, 860, 1044, 1050, 1051, 1113, 1114, 1366
BspMAI CTGCAG 1 cut(s) 1203
BspPI GGATC 3 cut(s) 777, 1335, 1382
BspT107I GGYRCC 2 cut(s) 1042, 1364
BsrBI CCGCTC 1 cut(s) 531
BsrFI RCCGGY 4 cut(s) 218, 403, 686, 788
BsrI ACTGG 2 cut(s) 286, 1392
BssAI RCCGGY 4 cut(s) 218, 403, 686, 788
BssECI CCNNGG 4 cut(s) 126, 514, 801, 1188
BssMI GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
BssNI GRCGYC 2 cut(s) 84, 195
BssT1I CCWWGG 1 cut(s) 1188
Bst2UI CCWGG 2 cut(s) 128, 1325
Bst4CI ACNGT 7 cut(s) 100, 235, 241, 522, 1143, 1259, 1285
Bst6I CTCTTC 3 cut(s) 32, 38, 1151
BstACI GRCGYC 2 cut(s) 84, 195
BstAPI GCANNNNNTGC 1 cut(s) 400
BstBAI YACGTR 1 cut(s) 1410
BstC8I GCNNGC 7 cut(s) 55, 405, 893, 1041, 1096, 1169, 1244
BstDSI CCRYGG 1 cut(s) 801
BstEII GGTNACC 2 cut(s) 806, 1375
BstF5I GGATG 4 cut(s) 63, 306, 864, 1055
BstFNI CGCG 8 cut(s) 168, 204, 392, 647, 728, 803, 842, 1298
BstH2I RGCGCY 2 cut(s) 419, 1199
BstHHI GCGC 5 cut(s) 206, 394, 418, 1135, 1198
BstKTI GATC 7 cut(s) 177, 546, 561, 753, 772, 1330, 1390
BstMAI GTCTC 1 cut(s) 914
BstMBI GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
BstMCI CGRYCG 1 cut(s) 166
BstNI CCWGG 2 cut(s) 128, 1325
BstNSI RCATGY 1 cut(s) 709
BstPI GGTNACC 2 cut(s) 806, 1375
BstSCI CCNGG 6 cut(s) 126, 881, 1005, 1045, 1062, 1323
BstSFI CTRYAG 1 cut(s) 1199
BstSLI GKGCMC 4 cut(s) 506, 893, 1052, 1409
BstUI CGCG 8 cut(s) 168, 204, 392, 647, 728, 803, 842, 1298
BstV1I GCAGC 5 cut(s) 1103, 1115, 1185, 1236, 1239
BstV2I GAAGAC 1 cut(s) 768
BstX2I RGATCY 2 cut(s) 174, 769
BstXI CCANNNNNNTGG 1 cut(s) 1331
BstYI RGATCY 2 cut(s) 174, 769
BtgI CCRYGG 1 cut(s) 801
BtgZI GCGATG 5 cut(s) 208, 373, 557, 755, 1121
BtrI CACGTC 5 cut(s) 61, 372, 766, 874, 1018
BtsCI GGATG 4 cut(s) 63, 306, 864, 1055
BtsIMutI CAGTG 1 cut(s) 1281
Cac8I GCNNGC 7 cut(s) 55, 405, 893, 1041, 1096, 1169, 1244
CciI TCATGA 1 cut(s) 1308
CfoI GCGC 5 cut(s) 206, 394, 418, 1135, 1198
Cfr10I RCCGGY 4 cut(s) 218, 403, 686, 788
Cfr42I CCGCGG 1 cut(s) 804
CseI GACGC 3 cut(s) 73, 157, 734
Csp6I GTAC 4 cut(s) 568, 850, 1086, 1411
CspAI ACCGGT 1 cut(s) 788
CspCI CAANNNNNGTGG 2 cut(s) 1425, 1460
CviAII CATG 5 cut(s) 291, 691, 706, 1309, 1331
CviQI GTAC 4 cut(s) 568, 850, 1086, 1411
DpnI GATC 7 cut(s) 176, 545, 560, 752, 771, 1329, 1389
DpnII GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
EaeI YGGCCR 1 cut(s) 297
Eam1104I CTCTTC 3 cut(s) 32, 38, 1151
EarI CTCTTC 3 cut(s) 32, 38, 1151
EciI GGCGGA 3 cut(s) 40, 857, 1439
Eco130I CCWWGG 1 cut(s) 1188
Eco24I GRGCYC 2 cut(s) 506, 1052
Eco47I GGWCC 2 cut(s) 382, 1112
Eco57I CTGAAG 1 cut(s) 974
Eco91I GGTNACC 2 cut(s) 806, 1375
EcoO109I RGGNCCY 3 cut(s) 382, 1049, 1112
EcoO65I GGTNACC 2 cut(s) 806, 1375
EcoRII CCWGG 2 cut(s) 126, 1323
EcoT14I CCWWGG 1 cut(s) 1188
EcoT38I GRGCYC 2 cut(s) 506, 1052
ErhI CCWWGG 1 cut(s) 1188
FaeI CATG 5 cut(s) 294, 694, 709, 1312, 1334
FaqI GGGAC 2 cut(s) 109, 1098
FatI CATG 5 cut(s) 290, 690, 705, 1308, 1330
FauI CCCGC 6 cut(s) 123, 267, 286, 332, 796, 1441
FblI GTMKAC 1 cut(s) 1148
FokI GGATG 4 cut(s) 50, 293, 851, 1042
FriOI GRGCYC 2 cut(s) 506, 1052
FspBI CTAG 2 cut(s) 488, 773
FspI TGCGCA 1 cut(s) 1134
GlaI GCGC 5 cut(s) 205, 393, 417, 1134, 1197
GsaI CCCAGC 1 cut(s) 1103
HaeII RGCGCY 2 cut(s) 419, 1199
HgaI GACGC 3 cut(s) 73, 157, 734
HhaI GCGC 5 cut(s) 206, 394, 418, 1135, 1198
Hin1I GRCGYC 2 cut(s) 84, 195
Hin1II CATG 5 cut(s) 294, 694, 709, 1312, 1334
Hin6I GCGC 5 cut(s) 204, 392, 416, 1133, 1196
HinP1I GCGC 5 cut(s) 204, 392, 416, 1133, 1196
HincII GTYRAC 3 cut(s) 88, 601, 1149
HindII GTYRAC 3 cut(s) 88, 601, 1149
HindIII AAGCTT 1 cut(s) 14
HinfI GANTC 3 cut(s) 5, 342, 621
HphI GGTGA 7 cut(s) 61, 223, 229, 439, 618, 818, 1369
Hpy166II GTNNAC 6 cut(s) 88, 601, 1012, 1149, 1237, 1407
Hpy188I TCNGA 4 cut(s) 376, 518, 620, 970
Hpy188III TCNNGA 6 cut(s) 145, 172, 352, 526, 919, 1309
Hpy8I GTNNAC 6 cut(s) 88, 601, 1012, 1149, 1237, 1407
Hpy99I CGWCG 8 cut(s) 197, 245, 353, 376, 1019, 1147, 1150, 1153
HpyAV CCTTC 6 cut(s) 148, 217, 325, 406, 880, 1423
HpyCH4III ACNGT 7 cut(s) 100, 235, 241, 522, 1143, 1259, 1285
HpyCH4V TGCA 4 cut(s) 1201, 1224, 1242, 1407
Hsp92I GRCGYC 2 cut(s) 84, 195
Hsp92II CATG 5 cut(s) 294, 694, 709, 1312, 1334
HspAI GCGC 5 cut(s) 204, 392, 416, 1133, 1196
KflI GGGWCCC 1 cut(s) 1112
Kpn2I TCCGGA 1 cut(s) 525
KroI GCCGGC 1 cut(s) 403
KroNI GCCGGC 1 cut(s) 405
KspI CCGCGG 1 cut(s) 804
Kzo9I GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
LmnI GCTCC 5 cut(s) 279, 423, 528, 884, 970
Lsp1109I GCAGC 5 cut(s) 1103, 1115, 1185, 1236, 1239
LweI GCATC 5 cut(s) 231, 403, 703, 891, 1076
MaeI CTAG 2 cut(s) 488, 773
MaeIII GTNAC 7 cut(s) 229, 235, 245, 806, 1290, 1375, 1394
MalI GATC 7 cut(s) 176, 545, 560, 752, 771, 1329, 1389
MbiI CCGCTC 1 cut(s) 531
MboI GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
MboII GAAGA 8 cut(s) 19, 25, 169, 757, 760, 773, 1168, 1216
MflI RGATCY 2 cut(s) 174, 769
MhlI GDGCHC 4 cut(s) 506, 893, 1052, 1409
MluCI AATT 1 cut(s) 976
MlyI GAGTC 2 cut(s) 14, 615
MmeI TCCRAC 2 cut(s) 354, 948
MroI TCCGGA 1 cut(s) 525
MroNI GCCGGC 1 cut(s) 403
MseI TTAA 3 cut(s) 942, 1347, 1521
MslI CAYNNNNRTG 3 cut(s) 689, 704, 1370
MspA1I CMGCKG 3 cut(s) 803, 1230, 1385
MspR9I CCNGG 6 cut(s) 128, 883, 1007, 1047, 1064, 1325
Mva1269I GAATGC 1 cut(s) 483
MvaI CCWGG 2 cut(s) 128, 1325
MvnI CGCG 8 cut(s) 168, 204, 392, 647, 728, 803, 842, 1298
NaeI GCCGGC 1 cut(s) 405
NciI CCSGG 4 cut(s) 883, 1007, 1047, 1064
NdeII GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
NgoMIV GCCGGC 1 cut(s) 403
NlaIII CATG 5 cut(s) 294, 694, 709, 1312, 1334
NlaIV GGNNCC 8 cut(s) 504, 860, 1044, 1050, 1051, 1113, 1114, 1366
NmeAIII GCCGAG 3 cut(s) 404, 459, 716
NmuCI GTSAC 5 cut(s) 229, 235, 806, 1290, 1375
NsbI TGCGCA 1 cut(s) 1134
NspI RCATGY 1 cut(s) 709
OliI CACNNNNGTG 1 cut(s) 1370
PagI TCATGA 1 cut(s) 1308
PciI ACATGT 1 cut(s) 705
PcsI WCGNNNNNNNCGW 4 cut(s) 231, 249, 506, 1302
PctI GAATGC 1 cut(s) 483
PdiI GCCGGC 1 cut(s) 405
PfeI GAWTC 1 cut(s) 342
PflFI GACNNNGTC 1 cut(s) 167
PfoI TCCNGGA 1 cut(s) 881
PinAI ACCGGT 1 cut(s) 788
PleI GAGTC 2 cut(s) 13, 615
PpsI GAGTC 2 cut(s) 13, 615
Ppu21I YACGTR 1 cut(s) 1410
PpuMI RGGWCCY 2 cut(s) 382, 1112
PscI ACATGT 1 cut(s) 705
Psp5II RGGWCCY 2 cut(s) 382, 1112
Psp6I CCWGG 2 cut(s) 126, 1323
PspEI GGTNACC 2 cut(s) 806, 1375
PspFI CCCAGC 1 cut(s) 1099
PspGI CCWGG 2 cut(s) 126, 1323
PspN4I GGNNCC 8 cut(s) 504, 860, 1044, 1050, 1051, 1113, 1114, 1366
PspOMI GGGCCC 2 cut(s) 502, 1048
PspPPI RGGWCCY 2 cut(s) 382, 1112
PsrI GAACNNNNNNTAC 4 cut(s) 1199, 1231, 1304, 1336
PstI CTGCAG 1 cut(s) 1203
PsuI RGATCY 2 cut(s) 174, 769
PsyI GACNNNGTC 1 cut(s) 167
RsaI GTAC 4 cut(s) 569, 851, 1087, 1412
RsaNI GTAC 4 cut(s) 568, 850, 1086, 1411
RseI CAYNNNNRTG 3 cut(s) 689, 704, 1370
SacII CCGCGG 1 cut(s) 804
SalI GTCGAC 1 cut(s) 1147
SaqAI TTAA 3 cut(s) 942, 1347, 1521
Sau3AI GATC 7 cut(s) 174, 543, 558, 750, 769, 1327, 1387
SchI GAGTC 2 cut(s) 14, 615
ScrFI CCNGG 6 cut(s) 128, 883, 1007, 1047, 1064, 1325
SduI GDGCHC 4 cut(s) 506, 893, 1052, 1409
SfaNI GCATC 5 cut(s) 231, 403, 703, 891, 1076
SfcI CTRYAG 1 cut(s) 1199
Sfr303I CCGCGG 1 cut(s) 804
SgrBI CCGCGG 1 cut(s) 804
SgrDI CGTCGACG 1 cut(s) 1147
SinI GGWCC 2 cut(s) 382, 1112
SmiMI CAYNNNNRTG 3 cut(s) 689, 704, 1370
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 1 cut(s) 976
SspI AATATT 1 cut(s) 1525
SspMI CTAG 2 cut(s) 488, 773
StyD4I CCNGG 6 cut(s) 126, 881, 1005, 1045, 1062, 1323
StyI CCWWGG 1 cut(s) 1188
TaaI ACNGT 7 cut(s) 100, 235, 241, 522, 1143, 1259, 1285
TaqI TCGA 9 cut(s) 162, 180, 464, 552, 675, 711, 918, 1002, 1148
TasI AATT 1 cut(s) 976
TauI GCSGC 6 cut(s) 77, 284, 534, 669, 1196, 1301
TfiI GAWTC 1 cut(s) 342
Tru1I TTAA 3 cut(s) 942, 1347, 1521
Tru9I TTAA 3 cut(s) 942, 1347, 1521
TscAI CASTG 1 cut(s) 1288
TseFI GTSAC 5 cut(s) 229, 235, 806, 1290, 1375
TseI GCWGC 5 cut(s) 1091, 1103, 1198, 1224, 1227
Tsp45I GTSAC 5 cut(s) 229, 235, 806, 1290, 1375
TspDTI ATGAA 5 cut(s) 425, 707, 758, 774, 1325
TspRI CASTG 1 cut(s) 1288
Tth111I GACNNNGTC 1 cut(s) 167
VneI GTGCAC 1 cut(s) 1405
VpaK11BI GGWCC 2 cut(s) 382, 1112
XceI RCATGY 1 cut(s) 709
XmiI GTMKAC 1 cut(s) 1148
XspI CTAG 2 cut(s) 488, 773
ZraI GACGTC 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.