Rorug03G0206400

Belongs to the small heat shock protein (HSP20) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
18298540 .. 18302783
4244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0206400.1

Sequence Viewer

Length: 879 bp
ATGGCTCGTAAGACATTTGACAAAGACGGCCCGTTGCTGGTAGTTGCATCTGGTCGGGATACCATTCCTGTTGCAAGCGCCATAAAACGTTTAGCTCCAGAAAATGTTTTTCTTGTCCAGATACAACATCCAAGGTCACATCTGCATAGGTTTGATTTGGTGATAGCTCCTCGTCATGATTATTACCCGTTGACTCCTCATGCACAGAAACAAATTCCTTGGTTTCTCCGGAGGTGGATTACTCCTCGTGAACCACCTGGCAAAAATGTGGTTCTCACCATTGGAGCTCTTCATCAGGCTGATCCTGCTGCACTTAAGAGTGCTGCTTCTGCCTGGCACGCTGAACTGGCACCTCTCCCGAAGCCCTTGCTTGTAGTCAATATAGGAGGCCCTTCTGGAAACTGTTCATATGGTGTGGATCTTGCGAAACAGTTGGCAGCTATGCTGCAGAATGTTCTATGGAGCTGTGGAAGTGTGAGAATTTCTTTCTCTAGAAGAACTCCTGAGAAGGTGTCCAGACTTCTTATAAGAGAATTCAGTAATAATCCAAAAGTCTACATTTGGGATGGCGAAGGTTGCAATCCACATATGGGCCATCTAGCCTTGGCAGATGCTTTTATGATCACTGCTGATTCAGTCAGCATGTTGAGTGAGGCTTGCAGTACTGGCAAACCTGTGTATGTGATTGGGGCTGAACACTGTTCGTGGAAGTTGACAGACTTCCAGAACCGTCTGGAGGAACGGGGAGTAGTTCAACCATTCACTGGTAAAGAGGATATGTCCAAGTGTTGGAGCTATGTTCCACTTAATGACACTGCCGAGGCTGCTAGTCAGGTGATCAAGGTTCTTGCTGAGCGGGGATGGAGTATACTTATATAG

Protein Analysis

292

Amino Acids

32.33

Weight (kDa)

9.01

Isoelectric Point (pI)

38.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_fiss_Elm1 PF06258 2 - 281 7.7e-102 Mitochondrial fission ELM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 527
AccB1I GGYRCC 1 cut(s) 349
AccB7I CCANNNNNTGG 2 cut(s) 764, 789
AccBSI CCGCTC 1 cut(s) 856
AccI GTMKAC 2 cut(s) 555, 868
AccIII TCCGGA 1 cut(s) 228
AciI CCGC 1 cut(s) 856
AclI AACGTT 1 cut(s) 88
AclWI GGATC 2 cut(s) 296, 426
AcsI RAATTY 3 cut(s) 213, 480, 533
AfaI GTAC 1 cut(s) 664
AfiI CCNNNNNNNGG 5 cut(s) 37, 590, 736, 764, 789
AflII CTTAAG 1 cut(s) 314
AgsI TTSAA 1 cut(s) 755
AjnI CCWGG 2 cut(s) 256, 332
AluBI AGCT 6 cut(s) 95, 167, 287, 440, 465, 795
AluI AGCT 6 cut(s) 95, 167, 287, 440, 465, 795
Alw21I GWGCWC 1 cut(s) 289
AlwI GGATC 2 cut(s) 296, 426
Aor13HI TCCGGA 1 cut(s) 228
AoxI GGCC 3 cut(s) 28, 388, 592
ApeKI GCWGC 5 cut(s) 308, 323, 437, 445, 824
ApoI RAATTY 3 cut(s) 213, 480, 533
Asp700I GAANNNNTTC 1 cut(s) 403
AspLEI GCGC 1 cut(s) 80
AspS9I GGNCC 3 cut(s) 29, 389, 592
AsuHPI GGTGA 3 cut(s) 172, 268, 847
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 1 cut(s) 289
BauI CACGAG 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 289
BbvI GCAGC 5 cut(s) 295, 310, 432, 449, 811
BccI CCATC 3 cut(s) 560, 603, 855
BceAI ACGGC 1 cut(s) 43
BcgI CGANNNNNNTGC 2 cut(s) 349, 383
BciT130I CCWGG 2 cut(s) 258, 334
BciVI GTATCC 1 cut(s) 52
BclI TGATCA 2 cut(s) 621, 837
BfaI CTAG 3 cut(s) 492, 599, 828
BfmI CTRYAG 1 cut(s) 446
BfoI RGCGCY 1 cut(s) 81
BfrI CTTAAG 1 cut(s) 314
BfuI GTATCC 1 cut(s) 52
BisI GCNGC 5 cut(s) 309, 324, 438, 446, 825
BlpI GCTNAGC 1 cut(s) 852
BlsI GCNGC 5 cut(s) 310, 325, 439, 447, 826
BmcAI AGTACT 1 cut(s) 664
Bme1390I CCNGG 2 cut(s) 258, 334
BmgT120I GGNCC 3 cut(s) 29, 389, 592
BmiI GGNNCC 1 cut(s) 351
BmrFI CCNGG 2 cut(s) 258, 334
BmsI GCATC 2 cut(s) 56, 601
BpmI CTGGAG 2 cut(s) 81, 755
Bpu1102I GCTNAGC 1 cut(s) 852
BsaJI CCNNGG 4 cut(s) 131, 218, 603, 819
BsaWI WCCGGW 1 cut(s) 228
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 590, 736, 764, 789
Bse1I ACTGG 3 cut(s) 351, 670, 769
BseAI TCCGGA 1 cut(s) 228
BseBI CCWGG 2 cut(s) 258, 334
BseDI CCNNGG 4 cut(s) 131, 218, 603, 819
BseGI GGATG 3 cut(s) 127, 571, 866
BseLI CCNNNNNNNGG 5 cut(s) 37, 590, 736, 764, 789
BseMII CTCAG 2 cut(s) 495, 843
BseNI ACTGG 3 cut(s) 351, 670, 769
BseRI GAGGAG 3 cut(s) 159, 186, 234
BseXI GCAGC 5 cut(s) 295, 310, 432, 449, 811
BsgI GTGCAG 1 cut(s) 294
BshFI GGCC 3 cut(s) 30, 390, 594
BshNI GGYRCC 1 cut(s) 349
BsiHKAI GWGCWC 1 cut(s) 289
BsiSI CCGG 1 cut(s) 229
BslI CCNNNNNNNGG 5 cut(s) 37, 590, 736, 764, 789
BsnI GGCC 3 cut(s) 30, 390, 594
Bsp1286I GDGCHC 1 cut(s) 289
Bsp13I TCCGGA 1 cut(s) 228
Bsp143I GATC 4 cut(s) 301, 418, 621, 837
Bsp1720I GCTNAGC 1 cut(s) 852
BspACI CCGC 1 cut(s) 856
BspANI GGCC 3 cut(s) 30, 390, 594
BspCNI CTCAG 2 cut(s) 496, 844
BspEI TCCGGA 1 cut(s) 228
BspHI TCATGA 1 cut(s) 175
BspLI GGNNCC 1 cut(s) 351
BspMAI CTGCAG 1 cut(s) 450
BspPI GGATC 2 cut(s) 296, 426
BspQI GCTCTTC 1 cut(s) 294
BspT107I GGYRCC 1 cut(s) 349
BspTI CTTAAG 1 cut(s) 314
BsrBI CCGCTC 1 cut(s) 856
BsrI ACTGG 3 cut(s) 351, 670, 769
BssECI CCNNGG 4 cut(s) 131, 218, 603, 819
BssMI GATC 4 cut(s) 301, 418, 621, 837
BssNAI GTATAC 1 cut(s) 869
BssSI CACGAG 1 cut(s) 246
BssT1I CCWWGG 3 cut(s) 131, 218, 603
Bst1107I GTATAC 1 cut(s) 869
Bst2BI CACGAG 1 cut(s) 246
Bst2UI CCWGG 2 cut(s) 258, 334
Bst4CI ACNGT 4 cut(s) 404, 432, 701, 731
Bst6I CTCTTC 1 cut(s) 294
BstAFI CTTAAG 1 cut(s) 314
BstC8I GCNNGC 3 cut(s) 76, 339, 658
BstDEI CTNAG 2 cut(s) 504, 852
BstF5I GGATG 3 cut(s) 127, 571, 866
BstH2I RGCGCY 1 cut(s) 81
BstHHI GCGC 1 cut(s) 80
BstKTI GATC 4 cut(s) 304, 421, 624, 840
BstMBI GATC 4 cut(s) 301, 418, 621, 837
BstMWI GCNNNNNNNGC 7 cut(s) 305, 329, 338, 347, 576, 666, 824
BstNI CCWGG 2 cut(s) 258, 334
BstNSI RCATGY 1 cut(s) 646
BstSCI CCNGG 2 cut(s) 256, 332
BstSFI CTRYAG 1 cut(s) 446
BstV1I GCAGC 5 cut(s) 295, 310, 432, 449, 811
BstX2I RGATCY 1 cut(s) 418
BstYI RGATCY 1 cut(s) 418
BstZ17I GTATAC 1 cut(s) 869
BsuI GTATCC 1 cut(s) 52
BsuRI GGCC 3 cut(s) 30, 390, 594
BtsCI GGATG 3 cut(s) 127, 571, 866
BtsI GCAGTG 2 cut(s) 624, 813
BtsIMutI CAGTG 4 cut(s) 624, 697, 762, 813
Cac8I GCNNGC 3 cut(s) 76, 339, 658
CciI TCATGA 1 cut(s) 175
CfoI GCGC 1 cut(s) 80
Cfr13I GGNCC 3 cut(s) 29, 389, 592
Csp6I GTAC 1 cut(s) 663
CviAII CATG 3 cut(s) 176, 200, 643
CviQI GTAC 1 cut(s) 663
DdeI CTNAG 2 cut(s) 504, 852
DpnI GATC 4 cut(s) 303, 420, 623, 839
DpnII GATC 4 cut(s) 301, 418, 621, 837
Eam1104I CTCTTC 1 cut(s) 294
EarI CTCTTC 1 cut(s) 294
Ecl136II GAGCTC 1 cut(s) 287
Eco130I CCWWGG 3 cut(s) 131, 218, 603
Eco24I GRGCYC 1 cut(s) 289
Eco53kI GAGCTC 1 cut(s) 287
EcoICRI GAGCTC 1 cut(s) 287
EcoO109I RGGNCCY 1 cut(s) 389
EcoRI GAATTC 1 cut(s) 533
EcoRII CCWGG 2 cut(s) 256, 332
EcoT14I CCWWGG 3 cut(s) 131, 218, 603
EcoT38I GRGCYC 1 cut(s) 289
ErhI CCWWGG 3 cut(s) 131, 218, 603
FaeI CATG 3 cut(s) 179, 203, 646
FatI CATG 3 cut(s) 175, 199, 642
FauI CCCGC 1 cut(s) 849
FauNDI CATATG 2 cut(s) 409, 588
FbaI TGATCA 2 cut(s) 621, 837
FblI GTMKAC 2 cut(s) 555, 868
Fnu4HI GCNGC 5 cut(s) 309, 324, 438, 446, 825
FokI GGATG 3 cut(s) 114, 578, 873
FriOI GRGCYC 1 cut(s) 289
Fsp4HI GCNGC 5 cut(s) 309, 324, 438, 446, 825
FspBI CTAG 3 cut(s) 492, 599, 828
GlaI GCGC 1 cut(s) 79
GluI GCNGC 5 cut(s) 309, 324, 438, 446, 825
GsuI CTGGAG 2 cut(s) 81, 755
HaeII RGCGCY 1 cut(s) 81
HaeIII GGCC 3 cut(s) 30, 390, 594
HapII CCGG 1 cut(s) 229
HhaI GCGC 1 cut(s) 80
Hin1II CATG 3 cut(s) 179, 203, 646
Hin6I GCGC 1 cut(s) 78
HinP1I GCGC 1 cut(s) 78
HincII GTYRAC 2 cut(s) 192, 714
HindII GTYRAC 2 cut(s) 192, 714
HinfI GANTC 2 cut(s) 193, 632
HpaII CCGG 1 cut(s) 229
HphI GGTGA 3 cut(s) 172, 268, 847
Hpy166II GTNNAC 5 cut(s) 192, 251, 556, 714, 869
Hpy8I GTNNAC 5 cut(s) 192, 251, 556, 714, 869
HpyAV CCTTC 3 cut(s) 402, 502, 566
HpyCH4III ACNGT 4 cut(s) 404, 432, 701, 731
HpyCH4IV ACGT 1 cut(s) 88
HpyCH4V TGCA 8 cut(s) 47, 74, 145, 203, 311, 448, 579, 660
HpyF10VI GCNNNNNNNGC 7 cut(s) 305, 329, 338, 347, 576, 666, 824
HpyF3I CTNAG 2 cut(s) 504, 852
HpySE526I ACGT 1 cut(s) 88
Hsp92II CATG 3 cut(s) 179, 203, 646
HspAI GCGC 1 cut(s) 78
Kpn2I TCCGGA 1 cut(s) 228
Ksp22I TGATCA 2 cut(s) 621, 837
Kzo9I GATC 4 cut(s) 301, 418, 621, 837
LguI GCTCTTC 1 cut(s) 294
LmnI GCTCC 5 cut(s) 100, 172, 284, 462, 792
Lsp1109I GCAGC 5 cut(s) 295, 310, 432, 449, 811
LweI GCATC 2 cut(s) 56, 601
MaeI CTAG 3 cut(s) 492, 599, 828
MaeII ACGT 1 cut(s) 88
MaeIII GTNAC 1 cut(s) 135
MalI GATC 4 cut(s) 303, 420, 623, 839
MbiI CCGCTC 1 cut(s) 856
MboI GATC 4 cut(s) 301, 418, 621, 837
MboII GAAGA 2 cut(s) 281, 507
MflI RGATCY 1 cut(s) 418
MhlI GDGCHC 1 cut(s) 289
MluCI AATT 3 cut(s) 213, 480, 533
MlyI GAGTC 1 cut(s) 187
MmeI TCCRAC 1 cut(s) 770
MroI TCCGGA 1 cut(s) 228
MroXI GAANNNNTTC 1 cut(s) 403
MseI TTAA 2 cut(s) 315, 807
MspCI CTTAAG 1 cut(s) 314
MspI CCGG 1 cut(s) 229
MspR9I CCNGG 2 cut(s) 258, 334
MvaI CCWGG 2 cut(s) 258, 334
MwoI GCNNNNNNNGC 7 cut(s) 305, 329, 338, 347, 576, 666, 824
NdeI CATATG 2 cut(s) 409, 588
NdeII GATC 4 cut(s) 301, 418, 621, 837
NlaIII CATG 3 cut(s) 179, 203, 646
NlaIV GGNNCC 1 cut(s) 351
NmeAIII GCCGAG 1 cut(s) 844
NmuCI GTSAC 1 cut(s) 135
NspI RCATGY 1 cut(s) 646
PagI TCATGA 1 cut(s) 175
PciSI GCTCTTC 1 cut(s) 294
PdmI GAANNNNTTC 1 cut(s) 403
PfeI GAWTC 1 cut(s) 632
PflMI CCANNNNNTGG 2 cut(s) 764, 789
PkrI GCNGC 5 cut(s) 310, 325, 439, 447, 826
PleI GAGTC 1 cut(s) 187
PpsI GAGTC 1 cut(s) 187
PsiI TTATAA 1 cut(s) 527
Psp124BI GAGCTC 1 cut(s) 289
Psp1406I AACGTT 1 cut(s) 88
Psp6I CCWGG 2 cut(s) 256, 332
PspGI CCWGG 2 cut(s) 256, 332
PspN4I GGNNCC 1 cut(s) 351
PspPI GGNCC 3 cut(s) 29, 389, 592
PstI CTGCAG 1 cut(s) 450
PsuI RGATCY 1 cut(s) 418
RsaI GTAC 1 cut(s) 664
RsaNI GTAC 1 cut(s) 663
SacI GAGCTC 1 cut(s) 289
SapI GCTCTTC 1 cut(s) 294
SaqAI TTAA 2 cut(s) 315, 807
SatI GCNGC 5 cut(s) 309, 324, 438, 446, 825
Sau3AI GATC 4 cut(s) 301, 418, 621, 837
Sau96I GGNCC 3 cut(s) 29, 389, 592
ScaI AGTACT 1 cut(s) 664
SchI GAGTC 1 cut(s) 187
ScrFI CCNGG 2 cut(s) 258, 334
SduI GDGCHC 1 cut(s) 289
SfaNI GCATC 2 cut(s) 56, 601
SfcI CTRYAG 1 cut(s) 446
SmlI CTYRAG 1 cut(s) 314
SmoI CTYRAG 1 cut(s) 314
Sse9I AATT 3 cut(s) 213, 480, 533
SsiI CCGC 1 cut(s) 856
SspMI CTAG 3 cut(s) 492, 599, 828
SstI GAGCTC 1 cut(s) 289
StyD4I CCNGG 2 cut(s) 256, 332
StyI CCWWGG 3 cut(s) 131, 218, 603
TaaI ACNGT 4 cut(s) 404, 432, 701, 731
TaiI ACGT 1 cut(s) 91
TasI AATT 3 cut(s) 213, 480, 533
TatI WGTACW 1 cut(s) 662
TfiI GAWTC 1 cut(s) 632
Tru1I TTAA 2 cut(s) 315, 807
Tru9I TTAA 2 cut(s) 315, 807
TscAI CASTG 4 cut(s) 631, 704, 769, 820
TseFI GTSAC 1 cut(s) 135
TseI GCWGC 5 cut(s) 308, 323, 437, 445, 824
Tsp45I GTSAC 1 cut(s) 135
TspDTI ATGAA 2 cut(s) 281, 396
TspRI CASTG 4 cut(s) 631, 704, 769, 820
Van91I CCANNNNNTGG 2 cut(s) 764, 789
Vha464I CTTAAG 1 cut(s) 314
XapI RAATTY 3 cut(s) 213, 480, 533
XbaI TCTAGA 1 cut(s) 491
XceI RCATGY 1 cut(s) 646
XmiI GTMKAC 2 cut(s) 555, 868
XmnI GAANNNNTTC 1 cut(s) 403
XspI CTAG 3 cut(s) 492, 599, 828
ZrmI AGTACT 1 cut(s) 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.