FvH4_7g29611

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
21745461 .. 21747817
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g29611.t1

Sequence Viewer

Length: 1446 bp
ATGGAGTTCATTGGGCGCTTAACAATGGGGGTCTCCATTGTCGTCGTTCTGTACTTATTCTGCAGATTGTTACTTTCTTGCTGGGTTTTTCCTGTCCTGACTTACAGGAAGCTTAAGAAAAATGGTTTAACGGGTCCGACGCCGAGTTTTCCTTTAGGAAATCTTAGCGAGATGAAGAAGAAGAATAGCCAAAGCTCTTCTTCTTCTTCTTCTACCCATGACATACACTCAACTCTCTTTCCCTACTTTGCTCGCTGGCAGAAAGCCTACGGGAAAATGTTCGTTTACTGGTTGGGCACAGAGCCATTCCTATACGTAGCAGACGCAGCCTTACTGAAAAAGTTGTCGTCGGAGGTCACCGCGAAGAATTGGGGCAAACCGGCGGTGTTTAGACGCGACAGAGCTCCCATGTTTGGGAATGACCTTATCATGTCCGAAGGGGATGATTGGGTTCGTCATCGCCATGTTATCACTCCGGCATTTAACCCTACTAACTTAAAGGCAATGACTAGTTTGATGGTGGAAACCGCAACAACAATGCTAGACAACTGGACTACTCAGATCAACACTTCCGGCACGCAAGAAATCGAGGTTGAGCGTTCGATTTCAGCAACAGCTGGGGAGATCATCGCCAAGACCAGCTTCGGTATTAGTTACCAAAGTGGTCGCCAAGTCCGGAAGACTCGGGGAAGAAATCAACCAGCTATTTTTGTCGACATTGGCGAACGGAAGAAATCGATTAGATCAGAGACTAAGCAACACGACCTTCTCGGAATGCTGCTCAAAGAGAGCGATAAGCCGGGCAACTTCTCGAGGTCTCTGACCACACAGGAGCTGGTGGACGAGTGCAAGACATTTTTCTTCGGCGGCCACGAGACAACGGCATTGGCGATCACATGGACAATGCTACTTCTGGCTACCCATAGAGATTGGCAAGACGAACTGAGGGCAGAGGTTAATCAAGTTTTGGGAGATAAAGAAATTGATGTAAACAACCTTGCTGGACTAAAGAAGATGGGATGGGTGATGAATGAGGTTTTCAGACTATATCCTTCAGGACCAAATGCACAGAGGCAAGCTAGAGATGACATTCAAGTGAATGAGGACCTAACAATCCCTAGAGGAACCAATATGTGGATCGACATTGTGGGAATGCACCATGACCCTGAGCTATGGGGTGAGGATGTGCATGAGTTCAAGCCAGAGAGGTTCAAGGATGACATACGTGGTGGGTGCAAGCACAAGATGGGTTACTTGCCATTCGGGTTCGGAGGGAGGATGTGCATTGGTAGGAACTTGACGGTTTTGGAGTACAAGATTGTGCTGAGCCTAATTCTGTCTAGGTTCTCTTTTACTGTTTCTCCTACATATTGTCACTCTCCTTCTACTTTACTCACAATGAGGCCATCTTACGGCATGCCTCTAGTATTCCAGCTCTTGGATTGA

Protein Analysis

482

Amino Acids

54.62

Weight (kDa)

9.02

Isoelectric Point (pI)

37.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 79 - 223 2.7e-15 Cytochrome P450
p450 PF00067 241 - 457 3e-57 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1134, 1438
AccI GTMKAC 1 cut(s) 714
AccII CGCG 2 cut(s) 362, 396
AccIII TCCGGA 1 cut(s) 675
AciI CCGC 4 cut(s) 360, 383, 528, 867
AclWI GGATC 1 cut(s) 1145
AcoI YGGCCR 1 cut(s) 868
AcuI CTGAAG 1 cut(s) 1038
AcyI GRCGYC 1 cut(s) 140
AfaI GTAC 2 cut(s) 53, 1313
AfiI CCNNNNNNNGG 5 cut(s) 413, 414, 1134, 1412, 1438
AflII CTTAAG 1 cut(s) 113
AgsI TTSAA 3 cut(s) 1094, 1198, 1213
AhlI ACTAGT 1 cut(s) 509
AjuI GAANNNNNNNTTGG 2 cut(s) 626, 658
Alw21I GWGCWC 1 cut(s) 406
Alw26I GTCTC 4 cut(s) 37, 743, 822, 869
AlwI GGATC 1 cut(s) 1145
AlwNI CAGNNNCTG 1 cut(s) 835
Ama87I CYCGRG 2 cut(s) 684, 811
Aor13HI TCCGGA 1 cut(s) 675
AoxI GGCC 2 cut(s) 868, 1403
ApeKI GCWGC 2 cut(s) 326, 778
Asp700I GAANNNNTTC 1 cut(s) 278
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 3 cut(s) 134, 1058, 1105
AsuC2I CCSGG 1 cut(s) 801
AsuHPI GGTGA 3 cut(s) 349, 1036, 1190
AvaI CYCGRG 2 cut(s) 684, 811
AvaII GGWCC 3 cut(s) 134, 1058, 1105
BaeGI GKGCMC 1 cut(s) 299
BanII GRGCYC 1 cut(s) 406
BauI CACGAG 1 cut(s) 872
BbsI GAAGAC 1 cut(s) 686
Bbv12I GWGCWC 1 cut(s) 406
BbvI GCAGC 2 cut(s) 338, 765
BccI CCATC 5 cut(s) 511, 1009, 1014, 1240, 1414
BceAI ACGGC 2 cut(s) 897, 1429
BcnI CCSGG 1 cut(s) 801
BcoDI GTCTC 4 cut(s) 37, 743, 822, 869
BcuI ACTAGT 1 cut(s) 509
BfaI CTAG 6 cut(s) 510, 542, 1080, 1119, 1341, 1424
BfmI CTRYAG 1 cut(s) 61
BfoI RGCGCY 1 cut(s) 19
BfrI CTTAAG 1 cut(s) 113
BisI GCNGC 3 cut(s) 327, 779, 868
BlpI GCTNAGC 1 cut(s) 1325
BlsI GCNGC 3 cut(s) 328, 780, 869
Bme1390I CCNGG 1 cut(s) 801
Bme18I GGWCC 3 cut(s) 134, 1058, 1105
BmeT110I CYCGRG 2 cut(s) 684, 811
BmgT120I GGNCC 3 cut(s) 134, 1058, 1105
BmiI GGNNCC 2 cut(s) 135, 1126
BmrFI CCNGG 1 cut(s) 801
BpiI GAAGAC 1 cut(s) 686
Bpu10I CCTNAGC 1 cut(s) 1167
Bpu1102I GCTNAGC 1 cut(s) 1325
BpuMI CCSGG 1 cut(s) 801
Bsa29I ATCGAT 1 cut(s) 737
BsaAI YACGTR 2 cut(s) 316, 1226
BsaHI GRCGYC 1 cut(s) 140
BsaI GGTCTC 2 cut(s) 37, 822
BsaWI WCCGGW 1 cut(s) 675
BsaXI ACNNNNNCTCC 2 cut(s) 1345, 1375
Bsc4I CCNNNNNNNGG 5 cut(s) 413, 414, 1134, 1412, 1438
Bse118I RCCGGY 1 cut(s) 379
Bse1I ACTGG 2 cut(s) 293, 554
Bse3DI GCAATG 1 cut(s) 510
BseAI TCCGGA 1 cut(s) 675
BseCI ATCGAT 1 cut(s) 737
BseGI GGATG 5 cut(s) 448, 1025, 1189, 1222, 1284
BseLI CCNNNNNNNGG 5 cut(s) 413, 414, 1134, 1412, 1438
BseMI GCAATG 1 cut(s) 510
BseMII CTCAG 4 cut(s) 572, 935, 1158, 1316
BseNI ACTGG 2 cut(s) 293, 554
BseSI GKGCMC 1 cut(s) 299
BseXI GCAGC 2 cut(s) 338, 765
BseYI CCCAGC 2 cut(s) 81, 617
Bsh1236I CGCG 2 cut(s) 362, 396
BshFI GGCC 2 cut(s) 870, 1405
BshVI ATCGAT 1 cut(s) 737
BsiHKAI GWGCWC 1 cut(s) 406
BsiHKCI CYCGRG 2 cut(s) 684, 811
BsiSI CCGG 5 cut(s) 380, 476, 573, 676, 800
BslI CCNNNNNNNGG 5 cut(s) 413, 414, 1134, 1412, 1438
BsmAI GTCTC 4 cut(s) 37, 743, 822, 869
BsmI GAATGC 2 cut(s) 780, 1158
BsnI GGCC 2 cut(s) 870, 1405
Bso31I GGTCTC 2 cut(s) 37, 822
BsoBI CYCGRG 2 cut(s) 684, 811
Bsp1286I GDGCHC 2 cut(s) 299, 406
Bsp13I TCCGGA 1 cut(s) 675
Bsp143I GATC 5 cut(s) 561, 624, 743, 891, 1137
Bsp1720I GCTNAGC 1 cut(s) 1325
BspACI CCGC 4 cut(s) 360, 383, 528, 867
BspANI GGCC 2 cut(s) 870, 1405
BspCNI CTCAG 4 cut(s) 571, 936, 1159, 1317
BspDI ATCGAT 1 cut(s) 737
BspEI TCCGGA 1 cut(s) 675
BspFNI CGCG 2 cut(s) 362, 396
BspLI GGNNCC 2 cut(s) 135, 1126
BspMAI CTGCAG 1 cut(s) 65
BspPI GGATC 1 cut(s) 1145
BspQI GCTCTTC 1 cut(s) 202
BspTI CTTAAG 1 cut(s) 113
BspTNI GGTCTC 2 cut(s) 37, 822
BsrDI GCAATG 1 cut(s) 510
BsrFI RCCGGY 1 cut(s) 379
BsrI ACTGG 2 cut(s) 293, 554
BssAI RCCGGY 1 cut(s) 379
BssMI GATC 5 cut(s) 561, 624, 743, 891, 1137
BssNI GRCGYC 1 cut(s) 140
BssSI CACGAG 1 cut(s) 872
Bst2BI CACGAG 1 cut(s) 872
Bst4CI ACNGT 2 cut(s) 1303, 1357
Bst6I CTCTTC 1 cut(s) 202
BstACI GRCGYC 1 cut(s) 140
BstAFI CTTAAG 1 cut(s) 113
BstBAI YACGTR 2 cut(s) 316, 1226
BstC8I GCNNGC 6 cut(s) 253, 257, 578, 1077, 1238, 1418
BstDEI CTNAG 6 cut(s) 164, 558, 753, 944, 1167, 1325
BstEII GGTNACC 1 cut(s) 355
BstF5I GGATG 5 cut(s) 448, 1025, 1189, 1222, 1284
BstFNI CGCG 2 cut(s) 362, 396
BstH2I RGCGCY 1 cut(s) 19
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 5 cut(s) 564, 627, 746, 894, 1140
BstMAI GTCTC 4 cut(s) 37, 743, 822, 869
BstMBI GATC 5 cut(s) 561, 624, 743, 891, 1137
BstMWI GCNNNNNNNGC 1 cut(s) 326
BstNSI RCATGY 1 cut(s) 1420
BstPI GGTNACC 1 cut(s) 355
BstSCI CCNGG 1 cut(s) 799
BstSFI CTRYAG 1 cut(s) 61
BstSLI GKGCMC 1 cut(s) 299
BstSNI TACGTA 1 cut(s) 316
BstUI CGCG 2 cut(s) 362, 396
BstV1I GCAGC 2 cut(s) 338, 765
BstV2I GAAGAC 1 cut(s) 686
Bsu15I ATCGAT 1 cut(s) 737
BsuRI GGCC 2 cut(s) 870, 1405
BsuTUI ATCGAT 1 cut(s) 737
BtgZI GCGATG 2 cut(s) 443, 613
BtsCI GGATG 5 cut(s) 448, 1025, 1189, 1222, 1284
Cac8I GCNNGC 6 cut(s) 253, 257, 578, 1077, 1238, 1418
CaiI CAGNNNCTG 1 cut(s) 835
CfoI GCGC 1 cut(s) 18
Cfr10I RCCGGY 1 cut(s) 379
Cfr13I GGNCC 3 cut(s) 134, 1058, 1105
ClaI ATCGAT 1 cut(s) 737
CseI GACGC 3 cut(s) 148, 332, 402
Csp6I GTAC 2 cut(s) 52, 1312
CviAII CATG 8 cut(s) 218, 409, 430, 464, 897, 1160, 1190, 1417
CviQI GTAC 2 cut(s) 52, 1312
DdeI CTNAG 6 cut(s) 164, 558, 753, 944, 1167, 1325
DpnI GATC 5 cut(s) 563, 626, 745, 893, 1139
DpnII GATC 5 cut(s) 561, 624, 743, 891, 1137
EaeI YGGCCR 1 cut(s) 868
Eam1104I CTCTTC 1 cut(s) 202
EarI CTCTTC 1 cut(s) 202
Ecl136II GAGCTC 1 cut(s) 404
Eco105I TACGTA 1 cut(s) 316
Eco24I GRGCYC 1 cut(s) 406
Eco31I GGTCTC 2 cut(s) 37, 822
Eco47I GGWCC 3 cut(s) 134, 1058, 1105
Eco53kI GAGCTC 1 cut(s) 404
Eco57I CTGAAG 1 cut(s) 1038
Eco88I CYCGRG 2 cut(s) 684, 811
Eco91I GGTNACC 1 cut(s) 355
EcoICRI GAGCTC 1 cut(s) 404
EcoO109I RGGNCCY 1 cut(s) 1105
EcoO65I GGTNACC 1 cut(s) 355
EcoT38I GRGCYC 1 cut(s) 406
FaeI CATG 8 cut(s) 221, 412, 433, 467, 900, 1163, 1193, 1420
FalI AAGNNNNNCTT 4 cut(s) 184, 216, 626, 658
FatI CATG 8 cut(s) 217, 408, 429, 463, 896, 1159, 1189, 1416
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 3 cut(s) 327, 779, 868
FokI GGATG 5 cut(s) 455, 1032, 1196, 1229, 1291
FriOI GRGCYC 1 cut(s) 406
Fsp4HI GCNGC 3 cut(s) 327, 779, 868
FspBI CTAG 6 cut(s) 510, 542, 1080, 1119, 1341, 1424
GlaI GCGC 1 cut(s) 17
GluI GCNGC 3 cut(s) 327, 779, 868
GsaI CCCAGC 2 cut(s) 85, 621
HaeII RGCGCY 1 cut(s) 19
HaeIII GGCC 2 cut(s) 870, 1405
HapII CCGG 5 cut(s) 380, 476, 573, 676, 800
HgaI GACGC 3 cut(s) 148, 332, 402
HhaI GCGC 1 cut(s) 18
Hin1I GRCGYC 1 cut(s) 140
Hin1II CATG 8 cut(s) 221, 412, 433, 467, 900, 1163, 1193, 1420
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HincII GTYRAC 1 cut(s) 715
HindII GTYRAC 1 cut(s) 715
HindIII AAGCTT 1 cut(s) 110
HinfI GANTC 1 cut(s) 682
HpaII CCGG 5 cut(s) 380, 476, 573, 676, 800
HphI GGTGA 3 cut(s) 349, 1036, 1190
Hpy166II GTNNAC 4 cut(s) 286, 715, 841, 991
Hpy188I TCNGA 9 cut(s) 138, 352, 436, 561, 748, 773, 822, 1043, 1271
Hpy188III TCNNGA 4 cut(s) 97, 676, 811, 1056
Hpy8I GTNNAC 4 cut(s) 286, 715, 841, 991
Hpy99I CGWCG 3 cut(s) 47, 142, 352
HpyAV CCTTC 4 cut(s) 431, 776, 1062, 1392
HpyCH4III ACNGT 2 cut(s) 1303, 1357
HpyCH4IV ACGT 2 cut(s) 315, 1225
HpyCH4V TGCA 7 cut(s) 63, 849, 1067, 1156, 1189, 1236, 1284
HpyF10VI GCNNNNNNNGC 1 cut(s) 326
HpyF3I CTNAG 6 cut(s) 164, 558, 753, 944, 1167, 1325
HpySE526I ACGT 2 cut(s) 315, 1225
Hsp92I GRCGYC 1 cut(s) 140
Hsp92II CATG 8 cut(s) 221, 412, 433, 467, 900, 1163, 1193, 1420
HspAI GCGC 1 cut(s) 16
Kpn2I TCCGGA 1 cut(s) 675
Kzo9I GATC 5 cut(s) 561, 624, 743, 891, 1137
LguI GCTCTTC 1 cut(s) 202
LmnI GCTCC 2 cut(s) 409, 832
Lsp1109I GCAGC 2 cut(s) 338, 765
MaeI CTAG 6 cut(s) 510, 542, 1080, 1119, 1341, 1424
MaeII ACGT 2 cut(s) 315, 1225
MaeIII GTNAC 5 cut(s) 69, 355, 653, 1250, 1373
MalI GATC 5 cut(s) 563, 626, 745, 893, 1139
MboI GATC 5 cut(s) 561, 624, 743, 891, 1137
MhlI GDGCHC 2 cut(s) 299, 406
MluCI AATT 3 cut(s) 367, 981, 1332
MlyI GAGTC 1 cut(s) 676
MmeI TCCRAC 2 cut(s) 161, 330
MroI TCCGGA 1 cut(s) 675
MroXI GAANNNNTTC 1 cut(s) 278
MseI TTAA 6 cut(s) 20, 114, 128, 483, 497, 957
MslI CAYNNNNRTG 2 cut(s) 462, 1094
MspA1I CMGCKG 1 cut(s) 617
MspCI CTTAAG 1 cut(s) 113
MspI CCGG 5 cut(s) 380, 476, 573, 676, 800
MspR9I CCNGG 1 cut(s) 801
Mva1269I GAATGC 2 cut(s) 780, 1158
MvnI CGCG 2 cut(s) 362, 396
MwoI GCNNNNNNNGC 1 cut(s) 326
NciI CCSGG 1 cut(s) 801
NdeII GATC 5 cut(s) 561, 624, 743, 891, 1137
NlaIII CATG 8 cut(s) 221, 412, 433, 467, 900, 1163, 1193, 1420
NlaIV GGNNCC 2 cut(s) 135, 1126
NmeAIII GCCGAG 1 cut(s) 168
NmuCI GTSAC 2 cut(s) 355, 1373
NspI RCATGY 1 cut(s) 1420
PaeI GCATGC 1 cut(s) 1420
PaeR7I CTCGAG 1 cut(s) 811
PciSI GCTCTTC 1 cut(s) 202
PcsI WCGNNNNNNNCGW 3 cut(s) 720, 870, 887
PctI GAATGC 2 cut(s) 780, 1158
PdmI GAANNNNTTC 1 cut(s) 278
PflMI CCANNNNNTGG 2 cut(s) 1134, 1438
PkrI GCNGC 3 cut(s) 328, 780, 869
PleI GAGTC 1 cut(s) 676
PpsI GAGTC 1 cut(s) 676
Ppu21I YACGTR 2 cut(s) 316, 1226
PpuMI RGGWCCY 1 cut(s) 1105
Psp124BI GAGCTC 1 cut(s) 406
Psp5II RGGWCCY 1 cut(s) 1105
PspEI GGTNACC 1 cut(s) 355
PspFI CCCAGC 2 cut(s) 81, 617
PspN4I GGNNCC 2 cut(s) 135, 1126
PspPI GGNCC 3 cut(s) 134, 1058, 1105
PspPPI RGGWCCY 1 cut(s) 1105
PstI CTGCAG 1 cut(s) 65
PstNI CAGNNNCTG 1 cut(s) 835
PvuII CAGCTG 1 cut(s) 617
RsaI GTAC 2 cut(s) 53, 1313
RsaNI GTAC 2 cut(s) 52, 1312
RseI CAYNNNNRTG 2 cut(s) 462, 1094
SacI GAGCTC 1 cut(s) 406
SalI GTCGAC 1 cut(s) 713
SapI GCTCTTC 1 cut(s) 202
SaqAI TTAA 6 cut(s) 20, 114, 128, 483, 497, 957
SatI GCNGC 3 cut(s) 327, 779, 868
Sau3AI GATC 5 cut(s) 561, 624, 743, 891, 1137
Sau96I GGNCC 3 cut(s) 134, 1058, 1105
SchI GAGTC 1 cut(s) 676
ScrFI CCNGG 1 cut(s) 801
SduI GDGCHC 2 cut(s) 299, 406
SfcI CTRYAG 1 cut(s) 61
Sfr274I CTCGAG 1 cut(s) 811
SinI GGWCC 3 cut(s) 134, 1058, 1105
SlaI CTCGAG 1 cut(s) 811
SmiMI CAYNNNNRTG 2 cut(s) 462, 1094
SmlI CTYRAG 2 cut(s) 113, 811
SmoI CTYRAG 2 cut(s) 113, 811
SnaBI TACGTA 1 cut(s) 316
SpeI ACTAGT 1 cut(s) 509
SphI GCATGC 1 cut(s) 1420
Sse9I AATT 3 cut(s) 367, 981, 1332
SsiI CCGC 4 cut(s) 360, 383, 528, 867
SspMI CTAG 6 cut(s) 510, 542, 1080, 1119, 1341, 1424
SstI GAGCTC 1 cut(s) 406
StyD4I CCNGG 1 cut(s) 799
TaaI ACNGT 2 cut(s) 1303, 1357
TaiI ACGT 2 cut(s) 318, 1228
TaqI TCGA 6 cut(s) 588, 602, 714, 737, 812, 1140
TasI AATT 3 cut(s) 367, 981, 1332
TatI WGTACW 2 cut(s) 51, 1311
TauI GCSGC 1 cut(s) 870
Tru1I TTAA 6 cut(s) 20, 114, 128, 483, 497, 957
Tru9I TTAA 6 cut(s) 20, 114, 128, 483, 497, 957
TseFI GTSAC 2 cut(s) 355, 1373
TseI GCWGC 2 cut(s) 326, 778
Tsp45I GTSAC 2 cut(s) 355, 1373
TspDTI ATGAA 2 cut(s) 188, 1043
TspGWI ACGGA 1 cut(s) 742
Van91I CCANNNNNTGG 2 cut(s) 1134, 1438
Vha464I CTTAAG 1 cut(s) 113
VpaK11BI GGWCC 3 cut(s) 134, 1058, 1105
XceI RCATGY 1 cut(s) 1420
XcmI CCANNNNNNNNNTGG 1 cut(s) 832
XhoI CTCGAG 1 cut(s) 811
XmiI GTMKAC 1 cut(s) 714
XmnI GAANNNNTTC 1 cut(s) 278
XspI CTAG 6 cut(s) 510, 542, 1080, 1119, 1341, 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.