pycom07g24870

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
25407463 .. 25408183
721 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g24870.3

Sequence Viewer

Length: 546 bp
ATGGTCAAACTTTCGAGTTCCGACATTTTTGAATCGATTCAGCGTCGTCCCTCCTCCTCCTCCGCTATAAATACTCCCTCCATTCTCTTCTTATTACTCACAACTCACAAAAATATAAGCCTGCATATTACTACACACGTTAAGAAAGATAGAGAAATGGAGATCATCGTTCGATTTTTCATCATCGCCATCGTCATGGCGCTGCTGTACGTCTTTTGCAGTTTAATATTTTCCCTGTGGGTTTTTCCAGTTCTTGCATATAGGAAGCTCAGGAAAAATGGGTTAGATGGTCCCTCTCCAAGTTTTCCATTCGGAAATATCAGTGAGATGAAAAAGGAGAACATCAATGTTAAAAGCTCAAGTATCTCCCATGACATACACTCGACTCTCTTTCCCTTTTTTGCTCGCTGGCAAAACTCTTTCGGAAAGATGTTCGTTTATTGGTTGGGGACGGAACCATTTTTGTACATAGCAGATCCAGAGCTACTGAAAAAACTGTCTACGGAGGTGACAGCAAAAAACTGGGGGAAGCCTGCGGTGCGATGA

Protein Analysis

182

Amino Acids

20.76

Weight (kDa)

9.81

Isoelectric Point (pI)

53.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 500
AciI CCGC 2 cut(s) 63, 536
AclWI GGATC 1 cut(s) 470
AfaI GTAC 2 cut(s) 209, 467
AflIII ACRYGT 1 cut(s) 136
AgsI TTSAA 1 cut(s) 32
AluBI AGCT 3 cut(s) 268, 357, 484
AluI AGCT 3 cut(s) 268, 357, 484
AlwI GGATC 1 cut(s) 470
ApeKI GCWGC 1 cut(s) 202
Asp700I GAANNNNTTC 1 cut(s) 36
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 1 cut(s) 290
AsuHPI GGTGA 1 cut(s) 520
AvaII GGWCC 1 cut(s) 290
BbvI GCAGC 1 cut(s) 189
BccI CCATC 2 cut(s) 197, 281
BfoI RGCGCY 1 cut(s) 203
BisI GCNGC 1 cut(s) 203
BlsI GCNGC 1 cut(s) 204
Bme18I GGWCC 1 cut(s) 290
BmgT120I GGNCC 1 cut(s) 290
BmiI GGNNCC 2 cut(s) 292, 456
BmrI ACTGGG 1 cut(s) 532
BmuI ACTGGG 1 cut(s) 532
Bpu10I CCTNAGC 1 cut(s) 269
BpuEI CTTGAG 1 cut(s) 343
Bsa29I ATCGAT 1 cut(s) 35
Bse1I ACTGG 2 cut(s) 248, 527
BseCI ATCGAT 1 cut(s) 35
BseMII CTCAG 1 cut(s) 283
BseNI ACTGG 2 cut(s) 248, 527
BseRI GAGGAG 3 cut(s) 43, 46, 49
BseXI GCAGC 1 cut(s) 189
BshVI ATCGAT 1 cut(s) 35
BslFI GGGAC 3 cut(s) 33, 276, 463
BsmFI GGGAC 3 cut(s) 33, 276, 463
Bsp1407I TGTACA 1 cut(s) 465
Bsp143I GATC 2 cut(s) 162, 475
BspACI CCGC 2 cut(s) 63, 536
BspCNI CTCAG 1 cut(s) 282
BspDI ATCGAT 1 cut(s) 35
BspLI GGNNCC 2 cut(s) 292, 456
BspPI GGATC 1 cut(s) 470
BsrGI TGTACA 1 cut(s) 465
BsrI ACTGG 2 cut(s) 248, 527
BssMI GATC 2 cut(s) 162, 475
Bst4CI ACNGT 1 cut(s) 498
Bst6I CTCTTC 1 cut(s) 92
BstAUI TGTACA 1 cut(s) 465
BstC8I GCNNGC 4 cut(s) 122, 406, 410, 534
BstDEI CTNAG 1 cut(s) 269
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 1 cut(s) 202
BstKTI GATC 2 cut(s) 165, 478
BstMBI GATC 2 cut(s) 162, 475
BstMWI GCNNNNNNNGC 1 cut(s) 538
BstV1I GCAGC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 475
BstXI CCANNNNNNTGG 1 cut(s) 196
BstYI RGATCY 1 cut(s) 475
Bsu15I ATCGAT 1 cut(s) 35
BsuTUI ATCGAT 1 cut(s) 35
BtgZI GCGATG 1 cut(s) 169
BtsIMutI CAGTG 1 cut(s) 328
Cac8I GCNNGC 4 cut(s) 122, 406, 410, 534
CfoI GCGC 1 cut(s) 202
Cfr13I GGNCC 1 cut(s) 290
ClaI ATCGAT 1 cut(s) 35
CseI GACGC 1 cut(s) 32
Csp6I GTAC 2 cut(s) 208, 466
CviAII CATG 2 cut(s) 196, 371
CviJI RGCY 5 cut(s) 120, 268, 357, 484, 532
CviKI_1 RGCY 5 cut(s) 120, 268, 357, 484, 532
CviQI GTAC 2 cut(s) 208, 466
DdeI CTNAG 1 cut(s) 269
DpnI GATC 2 cut(s) 164, 477
DpnII GATC 2 cut(s) 162, 475
Eam1104I CTCTTC 1 cut(s) 92
EarI CTCTTC 1 cut(s) 92
Eco47I GGWCC 1 cut(s) 290
FaeI CATG 2 cut(s) 199, 374
FaiI YATR 9 cut(s) 68, 116, 126, 197, 259, 261, 372, 377, 470
FaqI GGGAC 3 cut(s) 33, 276, 463
FatI CATG 2 cut(s) 195, 370
FblI GTMKAC 1 cut(s) 500
Fnu4HI GCNGC 1 cut(s) 203
Fsp4HI GCNGC 1 cut(s) 203
GlaI GCGC 1 cut(s) 201
GluI GCNGC 1 cut(s) 203
HaeII RGCGCY 1 cut(s) 203
HgaI GACGC 1 cut(s) 32
HhaI GCGC 1 cut(s) 202
Hin1II CATG 2 cut(s) 199, 374
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HinfI GANTC 3 cut(s) 32, 37, 385
HphI GGTGA 1 cut(s) 520
Hpy166II GTNNAC 1 cut(s) 501
Hpy188I TCNGA 3 cut(s) 22, 314, 425
Hpy188III TCNNGA 2 cut(s) 271, 479
Hpy8I GTNNAC 1 cut(s) 501
Hpy99I CGWCG 1 cut(s) 48
HpyCH4III ACNGT 1 cut(s) 498
HpyCH4IV ACGT 2 cut(s) 138, 210
HpyCH4V TGCA 3 cut(s) 124, 219, 257
HpyF10VI GCNNNNNNNGC 1 cut(s) 538
HpyF3I CTNAG 1 cut(s) 269
HpySE526I ACGT 2 cut(s) 138, 210
Hsp92II CATG 2 cut(s) 199, 374
HspAI GCGC 1 cut(s) 200
Kzo9I GATC 2 cut(s) 162, 475
LpnPI CCDG 7 cut(s) 134, 248, 256, 261, 394, 492, 508
Lsp1109I GCAGC 1 cut(s) 189
MaeII ACGT 2 cut(s) 138, 210
MaeIII GTNAC 1 cut(s) 508
MalI GATC 2 cut(s) 164, 477
MboI GATC 2 cut(s) 162, 475
MboII GAAGA 1 cut(s) 79
MflI RGATCY 1 cut(s) 475
MlyI GAGTC 1 cut(s) 379
MmeI TCCRAC 1 cut(s) 45
MnlI CCTC 7 cut(s) 61, 64, 67, 70, 88, 304, 499
MroXI GAANNNNTTC 1 cut(s) 36
MseI TTAA 3 cut(s) 141, 224, 351
MslI CAYNNNNRTG 1 cut(s) 194
MwoI GCNNNNNNNGC 1 cut(s) 538
NdeII GATC 2 cut(s) 162, 475
NlaIII CATG 2 cut(s) 199, 374
NlaIV GGNNCC 2 cut(s) 292, 456
NmuCI GTSAC 1 cut(s) 508
PdmI GAANNNNTTC 1 cut(s) 36
PfeI GAWTC 2 cut(s) 32, 37
PkrI GCNGC 1 cut(s) 204
PleI GAGTC 1 cut(s) 379
PpsI GAGTC 1 cut(s) 379
PspN4I GGNNCC 2 cut(s) 292, 456
PspPI GGNCC 1 cut(s) 290
PsuI RGATCY 1 cut(s) 475
RsaI GTAC 2 cut(s) 209, 467
RsaNI GTAC 2 cut(s) 208, 466
RseI CAYNNNNRTG 1 cut(s) 194
SaqAI TTAA 3 cut(s) 141, 224, 351
SatI GCNGC 1 cut(s) 203
Sau3AI GATC 2 cut(s) 162, 475
Sau96I GGNCC 1 cut(s) 290
SchI GAGTC 1 cut(s) 379
SetI ASST 6 cut(s) 141, 213, 270, 359, 486, 510
SinI GGWCC 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 194
SmlI CTYRAG 1 cut(s) 358
SmoI CTYRAG 1 cut(s) 358
SsiI CCGC 2 cut(s) 63, 536
SspI AATATT 1 cut(s) 228
TaaI ACNGT 1 cut(s) 498
TaiI ACGT 2 cut(s) 141, 213
TaqI TCGA 4 cut(s) 14, 35, 172, 383
TatI WGTACW 1 cut(s) 465
TfiI GAWTC 2 cut(s) 32, 37
Tru1I TTAA 3 cut(s) 141, 224, 351
Tru9I TTAA 3 cut(s) 141, 224, 351
TscAI CASTG 1 cut(s) 328
TseFI GTSAC 1 cut(s) 508
TseI GCWGC 1 cut(s) 202
Tsp45I GTSAC 1 cut(s) 508
TspDTI ATGAA 2 cut(s) 169, 344
TspGWI ACGGA 2 cut(s) 467, 518
TspRI CASTG 1 cut(s) 328
VpaK11BI GGWCC 1 cut(s) 290
XmiI GTMKAC 1 cut(s) 500
XmnI GAANNNNTTC 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.