MD01G1202600.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
29843134 .. 29846073
2940 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1202600.v1.1.491

Sequence Viewer

Length: 1536 bp
ATGGAGACCATTGTTCTAGGTTTTGTCATCGCCATCGTCATGGCACTTCTGTATGTTTTCTGCAGATTAATATTTTCTTTCTGGGTTTTTCCAGTTCTTGCGTACAGGAAGCTCAAGAGAAATGGGTTGGATGGTCCATCTCCAAGTTTTCCATTCGGAAATCTGAGTGAGATGAAAAAGAAGATCATCAATGTTCAAAGTTCAAATATCTCCCATGACATACACTCAACTCTTTTTCCTTTTTTTACTCGCTGGCAACACTCTTTCGGAAAGATGTTCATTTATTGGTTGGGGACGGAGCCATTTTTGTATATAGCAGATCCAGAGCTACTGAAAAAACTGTCTACGGAGGTGACAGCAAAGAACTGGGGGAAGCCTGCGGTGTTCCGACGCGATAGATCCCCGATGTTTGGTAATGGCCTACTCATGTCCGAAGGCGATGACTGGGTCCGTCACCGCCATGTTATCACTCCTGCTTTTAACCCAACAAACTTGAAGGCAATGGCGAGCTTAATGGTGGAGACCACCAACAAAATGCTAGACAACTGGGTGACTCTCATAGATTCCGGAGCTCAAGAAATCGACGTCGAGAGAGAAATCATAGCAACCGCCGGAGAAATCATCGCCAAGACCAGCTTTGGCATCAGCGACCAAAGTGGCCGCCCAGTGTTCGAAAAACTAAGAGCCTTGCAAATGACACTCTTCAAAACGGTTCGTTTTGTGGGAGTTCCTTTCGGAAAAATGTTGCACCCTAAGAAAACCCTAGAGGCCAGAAAACTTGGGCAAGAAATTAACCAATTGTTCTTGTCACTTATTGACGAAAGGCGAAAATCCATCAGAGGGTCGACGCCGCAGCACGACCTGCTTGGCTTGTTGCTTAAACAGAGTGAACAAGGAGGCTTCACAAAGTCCTTAACCACACAAGAACTAGTGGATGAGTGCAAGACATTTTTCTTTGGAGGTCATGAGACAACTGCATTGGCAATCACATGGACAATGTTGCTTCTGGCCACTCACCAGGATTGGCAACATCAGTTGAGAGAGGAGATTAGGGAAGTGGTCGGAGATAAAGGAATTGATGTGAACATGCTTTCTGGACTAAAGAAGATGGGATGGGTGATGAATGAAGTCTTCCGACTGTACCCTTCGGCACCAAATGCACAGAGGCAAGCCAAAGCCGACATTCAAGTGAGCGATGACTTGTCCATTCCGAGGGGAACCAATATGTGGATTGACATCGTCGGCATGCACCACGACCCGGCCCTGTGGGGCGAGGACGTCAACGAGTTCAAGCCGGAGAGGTTCAAGGACGACATCCACGGTCGGTGCAAGTACAAGATGGGGTACTTGCCCTTTGGGTTTGGAGGTAGAATGTGCATTGGTAGAAACTTGACGTTCTTGGAGTATAAGATAGTTCTAACCCTAATTCTAACTAGGTTTTCTTTTACCATCTCTCCCACTTATTGCCACTCCCCTTCTATTATGCTCTCTCTAAGGCCTTCCGATGGCCTGCCGCTAGTACTCCAGCCCCTCTAG

Protein Analysis

512

Amino Acids

58.26

Weight (kDa)

9.07

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 76 - 488 3.7e-80 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 588, 1281
Acc36I ACCTGC 1 cut(s) 870
AccB1I GGYRCC 1 cut(s) 1150
AccB7I CCANNNNNTGG 1 cut(s) 1227
AccI GTMKAC 2 cut(s) 344, 845
AccII CGCG 1 cut(s) 393
AccIII TCCGGA 1 cut(s) 566
AciI CCGC 6 cut(s) 380, 457, 609, 661, 851, 1514
AclWI GGATC 2 cut(s) 314, 393
AcoI YGGCCR 2 cut(s) 658, 1008
AcyI GRCGYC 3 cut(s) 585, 848, 1278
AfaI GTAC 5 cut(s) 104, 1142, 1334, 1346, 1521
AfiI CCNNNNNNNGG 6 cut(s) 410, 840, 1212, 1227, 1258, 1505
AgsI TTSAA 7 cut(s) 197, 204, 496, 706, 1187, 1291, 1306
AhlI ACTAGT 1 cut(s) 928
AjnI CCWGG 1 cut(s) 1017
AluBI AGCT 5 cut(s) 112, 328, 510, 572, 636
AluI AGCT 5 cut(s) 112, 328, 510, 572, 636
Alw21I GWGCWC 1 cut(s) 574
Alw26I GTCTC 2 cut(s) 515, 962
AlwI GGATC 2 cut(s) 314, 393
Aor13HI TCCGGA 1 cut(s) 566
AoxI GGCC 7 cut(s) 418, 658, 768, 1008, 1260, 1496, 1507
ApeKI GCWGC 1 cut(s) 853
AseI ATTAAT 1 cut(s) 68
AspS9I GGNCC 3 cut(s) 134, 448, 1261
AsuC2I CCSGG 1 cut(s) 1259
AsuHPI GGTGA 5 cut(s) 364, 446, 562, 1007, 1129
AsuII TTCGAA 1 cut(s) 672
AvaII GGWCC 2 cut(s) 134, 448
BalI TGGCCA 1 cut(s) 1010
BanI GGYRCC 1 cut(s) 1150
BanII GRGCYC 1 cut(s) 574
BbsI GAAGAC 1 cut(s) 1123
Bbv12I GWGCWC 1 cut(s) 574
BbvI GCAGC 1 cut(s) 865
BccI CCATC 9 cut(s) 41, 125, 145, 842, 1102, 1107, 1333, 1457, 1499
BciT130I CCWGG 1 cut(s) 1019
BcnI CCSGG 1 cut(s) 1259
BcoDI GTCTC 2 cut(s) 515, 962
BcuI ACTAGT 1 cut(s) 928
BfaI CTAG 7 cut(s) 17, 539, 764, 929, 1434, 1517, 1534
BfmI CTRYAG 1 cut(s) 61
BfuAI ACCTGC 1 cut(s) 870
BisI GCNGC 4 cut(s) 661, 851, 854, 1514
BlsI GCNGC 4 cut(s) 662, 852, 855, 1515
BmcAI AGTACT 1 cut(s) 1521
Bme1390I CCNGG 2 cut(s) 1019, 1259
Bme18I GGWCC 2 cut(s) 134, 448
BmgT120I GGNCC 3 cut(s) 134, 448, 1261
BmiI GGNNCC 4 cut(s) 300, 449, 1152, 1219
BmrFI CCNGG 2 cut(s) 1019, 1259
BmrI ACTGGG 4 cut(s) 376, 454, 556, 659
BmsI GCATC 1 cut(s) 651
BmuI ACTGGG 4 cut(s) 376, 454, 556, 659
BpiI GAAGAC 1 cut(s) 1123
BpmI CTGGAG 1 cut(s) 1508
Bpu14I TTCGAA 1 cut(s) 672
BpuEI CTTGAG 2 cut(s) 98, 558
BpuMI CCSGG 1 cut(s) 1259
BsaBI GATNNNNATC 1 cut(s) 1235
BsaHI GRCGYC 3 cut(s) 585, 848, 1278
BsaI GGTCTC 1 cut(s) 515
BsaJI CCNNGG 2 cut(s) 1211, 1318
BsaWI WCCGGW 1 cut(s) 566
BsaXI ACNNNNNCTCC 2 cut(s) 1438, 1468
Bsc4I CCNNNNNNNGG 6 cut(s) 410, 840, 1212, 1227, 1258, 1505
Bse1I ACTGG 5 cut(s) 92, 371, 449, 551, 665
Bse3DI GCAATG 1 cut(s) 507
Bse8I GATNNNNATC 1 cut(s) 1235
BseAI TCCGGA 1 cut(s) 566
BseBI CCWGG 1 cut(s) 1019
BseDI CCNNGG 2 cut(s) 1211, 1318
BseGI GGATG 4 cut(s) 136, 940, 1118, 1314
BseJI GATNNNNATC 1 cut(s) 1235
BseLI CCNNNNNNNGG 6 cut(s) 410, 840, 1212, 1227, 1258, 1505
BseMI GCAATG 1 cut(s) 507
BseMII CTCAG 1 cut(s) 155
BseNI ACTGG 5 cut(s) 92, 371, 449, 551, 665
BseRI GAGGAG 1 cut(s) 1058
BseXI GCAGC 1 cut(s) 865
Bsh1236I CGCG 1 cut(s) 393
Bsh1285I CGRYCG 1 cut(s) 1324
BshFI GGCC 7 cut(s) 420, 660, 770, 1010, 1262, 1498, 1509
BshNI GGYRCC 1 cut(s) 1150
BsiEI CGRYCG 1 cut(s) 1324
BsiHKAI GWGCWC 1 cut(s) 574
BsiSI CCGG 4 cut(s) 567, 612, 1259, 1295
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 6 cut(s) 410, 840, 1212, 1227, 1258, 1505
BsmAI GTCTC 2 cut(s) 515, 962
BsmFI GGGAC 1 cut(s) 307
BsnI GGCC 7 cut(s) 420, 660, 770, 1010, 1262, 1498, 1509
Bso31I GGTCTC 1 cut(s) 515
Bsp119I TTCGAA 1 cut(s) 672
Bsp1286I GDGCHC 1 cut(s) 574
Bsp13I TCCGGA 1 cut(s) 566
Bsp143I GATC 3 cut(s) 183, 319, 398
BspACI CCGC 6 cut(s) 380, 457, 609, 661, 851, 1514
BspANI GGCC 7 cut(s) 420, 660, 770, 1010, 1262, 1498, 1509
BspCNI CTCAG 1 cut(s) 156
BspEI TCCGGA 1 cut(s) 566
BspFNI CGCG 1 cut(s) 393
BspHI TCATGA 1 cut(s) 964
BspLI GGNNCC 4 cut(s) 300, 449, 1152, 1219
BspMAI CTGCAG 1 cut(s) 65
BspMI ACCTGC 1 cut(s) 870
BspPI GGATC 2 cut(s) 314, 393
BspT104I TTCGAA 1 cut(s) 672
BspT107I GGYRCC 1 cut(s) 1150
BspTNI GGTCTC 1 cut(s) 515
BsrDI GCAATG 1 cut(s) 507
BsrI ACTGG 5 cut(s) 92, 371, 449, 551, 665
BssECI CCNNGG 2 cut(s) 1211, 1318
BssMI GATC 3 cut(s) 183, 319, 398
BssNI GRCGYC 3 cut(s) 585, 848, 1278
Bst2UI CCWGG 1 cut(s) 1019
Bst4CI ACNGT 4 cut(s) 342, 712, 1140, 1322
Bst6I CTCTTC 1 cut(s) 707
BstACI GRCGYC 3 cut(s) 585, 848, 1278
BstAPI GCANNNNNTGC 2 cut(s) 862, 1157
BstBI TTCGAA 1 cut(s) 672
BstC8I GCNNGC 6 cut(s) 254, 378, 508, 1170, 1247, 1511
BstDEI CTNAG 4 cut(s) 164, 680, 753, 1493
BstDSI CCRYGG 1 cut(s) 1318
BstF5I GGATG 4 cut(s) 136, 940, 1118, 1314
BstFNI CGCG 1 cut(s) 393
BstKTI GATC 3 cut(s) 186, 322, 401
BstMAI GTCTC 2 cut(s) 515, 962
BstMBI GATC 3 cut(s) 183, 319, 398
BstMCI CGRYCG 1 cut(s) 1324
BstMWI GCNNNNNNNGC 2 cut(s) 862, 1157
BstNI CCWGG 1 cut(s) 1019
BstNSI RCATGY 2 cut(s) 1090, 1249
BstSCI CCNGG 2 cut(s) 1017, 1257
BstSFI CTRYAG 1 cut(s) 61
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 1 cut(s) 865
BstV2I GAAGAC 1 cut(s) 1123
BstX2I RGATCY 2 cut(s) 319, 398
BstXI CCANNNNNNTGG 1 cut(s) 40
BstYI RGATCY 2 cut(s) 319, 398
BsuRI GGCC 7 cut(s) 420, 660, 770, 1010, 1262, 1498, 1509
BtgI CCRYGG 1 cut(s) 1318
BtgZI GCGATG 4 cut(s) 13, 453, 607, 1209
BtsCI GGATG 4 cut(s) 136, 940, 1118, 1314
BtsIMutI CAGTG 1 cut(s) 672
BveI ACCTGC 1 cut(s) 870
Cac8I GCNNGC 6 cut(s) 254, 378, 508, 1170, 1247, 1511
CciI TCATGA 1 cut(s) 964
Cfr13I GGNCC 3 cut(s) 134, 448, 1261
CseI GACGC 2 cut(s) 399, 856
Csp6I GTAC 5 cut(s) 103, 1141, 1333, 1345, 1520
CviAII CATG 8 cut(s) 40, 215, 427, 461, 965, 990, 1087, 1246
CviQI GTAC 5 cut(s) 103, 1141, 1333, 1345, 1520
DdeI CTNAG 4 cut(s) 164, 680, 753, 1493
DpnI GATC 3 cut(s) 185, 321, 400
DpnII GATC 3 cut(s) 183, 319, 398
EaeI YGGCCR 2 cut(s) 658, 1008
Eam1104I CTCTTC 1 cut(s) 707
EarI CTCTTC 1 cut(s) 707
Ecl136II GAGCTC 1 cut(s) 572
Eco147I AGGCCT 1 cut(s) 1498
Eco24I GRGCYC 1 cut(s) 574
Eco31I GGTCTC 1 cut(s) 515
Eco47I GGWCC 2 cut(s) 134, 448
Eco53kI GAGCTC 1 cut(s) 572
EcoICRI GAGCTC 1 cut(s) 572
EcoRII CCWGG 1 cut(s) 1017
EcoT38I GRGCYC 1 cut(s) 574
FaeI CATG 8 cut(s) 43, 218, 430, 464, 968, 993, 1090, 1249
FalI AAGNNNNNCTT 2 cut(s) 620, 652
FaqI GGGAC 1 cut(s) 307
FatI CATG 8 cut(s) 39, 214, 426, 460, 964, 989, 1086, 1245
FblI GTMKAC 2 cut(s) 344, 845
Fnu4HI GCNGC 4 cut(s) 661, 851, 854, 1514
FokI GGATG 4 cut(s) 143, 947, 1125, 1301
FriOI GRGCYC 1 cut(s) 574
Fsp4HI GCNGC 4 cut(s) 661, 851, 854, 1514
FspBI CTAG 7 cut(s) 17, 539, 764, 929, 1434, 1517, 1534
GluI GCNGC 4 cut(s) 661, 851, 854, 1514
GsuI CTGGAG 1 cut(s) 1508
HaeIII GGCC 7 cut(s) 420, 660, 770, 1010, 1262, 1498, 1509
HapII CCGG 4 cut(s) 567, 612, 1259, 1295
HgaI GACGC 2 cut(s) 399, 856
Hin1I GRCGYC 3 cut(s) 585, 848, 1278
Hin1II CATG 8 cut(s) 43, 218, 430, 464, 968, 993, 1090, 1249
HincII GTYRAC 2 cut(s) 846, 1282
HindII GTYRAC 2 cut(s) 846, 1282
HinfI GANTC 2 cut(s) 553, 563
HpaII CCGG 4 cut(s) 567, 612, 1259, 1295
HphI GGTGA 5 cut(s) 364, 446, 562, 1007, 1129
Hpy166II GTNNAC 5 cut(s) 345, 846, 890, 1084, 1282
Hpy188III TCNNGA 7 cut(s) 115, 323, 567, 575, 589, 965, 1095
Hpy8I GTNNAC 5 cut(s) 345, 846, 890, 1084, 1282
Hpy99I CGWCG 5 cut(s) 393, 587, 590, 850, 1244
HpyAV CCTTC 5 cut(s) 428, 490, 1155, 1485, 1509
HpyCH4III ACNGT 4 cut(s) 342, 712, 1140, 1322
HpyCH4IV ACGT 3 cut(s) 585, 1278, 1394
HpyCH4V TGCA 9 cut(s) 63, 691, 748, 942, 977, 1160, 1249, 1329, 1377
HpyF10VI GCNNNNNNNGC 2 cut(s) 862, 1157
HpyF3I CTNAG 4 cut(s) 164, 680, 753, 1493
HpySE526I ACGT 3 cut(s) 585, 1278, 1394
Hsp92I GRCGYC 3 cut(s) 585, 848, 1278
Hsp92II CATG 8 cut(s) 43, 218, 430, 464, 968, 993, 1090, 1249
Kpn2I TCCGGA 1 cut(s) 566
Kzo9I GATC 3 cut(s) 183, 319, 398
LmnI GCTCC 2 cut(s) 298, 569
Lsp1109I GCAGC 1 cut(s) 865
LweI GCATC 1 cut(s) 651
MaeI CTAG 7 cut(s) 17, 539, 764, 929, 1434, 1517, 1534
MaeII ACGT 3 cut(s) 585, 1278, 1394
MaeIII GTNAC 4 cut(s) 352, 452, 550, 807
MalI GATC 3 cut(s) 185, 321, 400
MboI GATC 3 cut(s) 183, 319, 398
MboII GAAGA 4 cut(s) 193, 694, 1117, 1123
MfeI CAATTG 1 cut(s) 797
MflI RGATCY 2 cut(s) 319, 398
MhlI GDGCHC 1 cut(s) 574
MlsI TGGCCA 1 cut(s) 1010
MluCI AATT 4 cut(s) 789, 797, 1074, 1425
MluNI TGGCCA 1 cut(s) 1010
MlyI GAGTC 1 cut(s) 547
MmeI TCCRAC 4 cut(s) 108, 412, 1042, 1159
Mox20I TGGCCA 1 cut(s) 1010
MroI TCCGGA 1 cut(s) 566
MscI TGGCCA 1 cut(s) 1010
MseI TTAA 6 cut(s) 68, 480, 512, 792, 879, 914
MslI CAYNNNNRTG 3 cut(s) 38, 459, 1187
Msp20I TGGCCA 1 cut(s) 1010
MspI CCGG 4 cut(s) 567, 612, 1259, 1295
MspR9I CCNGG 2 cut(s) 1019, 1259
MunI CAATTG 1 cut(s) 797
MvaI CCWGG 1 cut(s) 1019
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 2 cut(s) 862, 1157
NciI CCSGG 1 cut(s) 1259
NdeII GATC 3 cut(s) 183, 319, 398
NlaIII CATG 8 cut(s) 43, 218, 430, 464, 968, 993, 1090, 1249
NlaIV GGNNCC 4 cut(s) 300, 449, 1152, 1219
NmuCI GTSAC 4 cut(s) 352, 452, 550, 807
NspI RCATGY 2 cut(s) 1090, 1249
NspV TTCGAA 1 cut(s) 672
PaeI GCATGC 1 cut(s) 1249
PagI TCATGA 1 cut(s) 964
PceI AGGCCT 1 cut(s) 1498
PfeI GAWTC 1 cut(s) 563
PflFI GACNNNGTC 2 cut(s) 446, 1238
PflMI CCANNNNNTGG 1 cut(s) 1227
PkrI GCNGC 4 cut(s) 662, 852, 855, 1515
PleI GAGTC 1 cut(s) 547
PpsI GAGTC 1 cut(s) 547
PshBI ATTAAT 1 cut(s) 68
Psp124BI GAGCTC 1 cut(s) 574
Psp6I CCWGG 1 cut(s) 1017
PspGI CCWGG 1 cut(s) 1017
PspN4I GGNNCC 4 cut(s) 300, 449, 1152, 1219
PspPI GGNCC 3 cut(s) 134, 448, 1261
PstI CTGCAG 1 cut(s) 65
PsuI RGATCY 2 cut(s) 319, 398
PsyI GACNNNGTC 2 cut(s) 446, 1238
RsaI GTAC 5 cut(s) 104, 1142, 1334, 1346, 1521
RsaNI GTAC 5 cut(s) 103, 1141, 1333, 1345, 1520
RseI CAYNNNNRTG 3 cut(s) 38, 459, 1187
SacI GAGCTC 1 cut(s) 574
SalI GTCGAC 1 cut(s) 844
SaqAI TTAA 6 cut(s) 68, 480, 512, 792, 879, 914
SatI GCNGC 4 cut(s) 661, 851, 854, 1514
Sau3AI GATC 3 cut(s) 183, 319, 398
Sau96I GGNCC 3 cut(s) 134, 448, 1261
ScaI AGTACT 1 cut(s) 1521
SchI GAGTC 1 cut(s) 547
ScrFI CCNGG 2 cut(s) 1019, 1259
SduI GDGCHC 1 cut(s) 574
SfaNI GCATC 1 cut(s) 651
SfcI CTRYAG 1 cut(s) 61
SfuI TTCGAA 1 cut(s) 672
SinI GGWCC 2 cut(s) 134, 448
SmiMI CAYNNNNRTG 3 cut(s) 38, 459, 1187
SmlI CTYRAG 2 cut(s) 113, 573
SmoI CTYRAG 2 cut(s) 113, 573
SpeI ACTAGT 1 cut(s) 928
SphI GCATGC 1 cut(s) 1249
Sse9I AATT 4 cut(s) 789, 797, 1074, 1425
SseBI AGGCCT 1 cut(s) 1498
SsiI CCGC 6 cut(s) 380, 457, 609, 661, 851, 1514
SspI AATATT 1 cut(s) 72
SspMI CTAG 7 cut(s) 17, 539, 764, 929, 1434, 1517, 1534
SstI GAGCTC 1 cut(s) 574
StuI AGGCCT 1 cut(s) 1498
StyD4I CCNGG 2 cut(s) 1017, 1257
TaaI ACNGT 4 cut(s) 342, 712, 1140, 1322
TaiI ACGT 3 cut(s) 588, 1281, 1397
TaqI TCGA 4 cut(s) 582, 588, 672, 845
TasI AATT 4 cut(s) 789, 797, 1074, 1425
TatI WGTACW 2 cut(s) 1332, 1519
TauI GCSGC 3 cut(s) 663, 853, 1516
TfiI GAWTC 1 cut(s) 563
Tru1I TTAA 6 cut(s) 68, 480, 512, 792, 879, 914
Tru9I TTAA 6 cut(s) 68, 480, 512, 792, 879, 914
TscAI CASTG 1 cut(s) 672
TseFI GTSAC 4 cut(s) 352, 452, 550, 807
TseI GCWGC 1 cut(s) 853
Tsp45I GTSAC 4 cut(s) 352, 452, 550, 807
TspDTI ATGAA 4 cut(s) 188, 268, 1136, 1140
TspGWI ACGGA 3 cut(s) 311, 362, 440
TspRI CASTG 1 cut(s) 672
Tth111I GACNNNGTC 2 cut(s) 446, 1238
Van91I CCANNNNNTGG 1 cut(s) 1227
VpaK11BI GGWCC 2 cut(s) 134, 448
VspI ATTAAT 1 cut(s) 68
XceI RCATGY 2 cut(s) 1090, 1249
XmiI GTMKAC 2 cut(s) 344, 845
XspI CTAG 7 cut(s) 17, 539, 764, 929, 1434, 1517, 1534
ZraI GACGTC 2 cut(s) 586, 1279
ZrmI AGTACT 1 cut(s) 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.